BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00020844
         (390 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU22695.1| hypothetical protein MIMGU_mgv1a012912mg [Mimulus...   104   1e-20
ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protei...    99   6e-19
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei...    99   6e-19
ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum]        99   8e-19
ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit...    99   8e-19
ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protei...    89   8e-16
pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I) gi...    85   9e-15
gb|ADL36848.1| WHY domain class transcription factor [Malus dome...    85   9e-15
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb...    85   9e-15
ref|XP_007019693.1| Whirly 2, putative isoform 1 [Theobroma caca...    85   1e-14
ref|XP_007200526.1| hypothetical protein PRUPE_ppa011529mg [Prun...    85   1e-14
ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Popu...    85   1e-14
ref|XP_004494755.1| PREDICTED: single-stranded DNA-bindig protei...    83   5e-14
ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258...    82   6e-14
ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825...    82   8e-14
ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protei...    81   1e-13
ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Caps...    81   1e-13
ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Caps...    81   1e-13
gb|ACU19178.1| unknown [Glycine max]                                   81   2e-13
ref|XP_007147230.1| hypothetical protein PHAVU_006G106800g [Phas...    80   2e-13

>gb|EYU22695.1| hypothetical protein MIMGU_mgv1a012912mg [Mimulus guttatus]
          Length = 236

 Score =  104 bits (260), Expect = 1e-20
 Identities = 51/77 (66%), Positives = 64/77 (83%), Gaps = 3/77 (3%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLP---SRSNQ 218
           YFVSL+VVNN+L+TNDRFVVPVT AEFAVMRTAF+FALPH+IGWD+   ++P   S+S+ 
Sbjct: 160 YFVSLSVVNNILKTNDRFVVPVTTAEFAVMRTAFTFALPHLIGWDQYTNQVPHCASKSSP 219

Query: 217 GSAARAAPESQTSEWDR 167
            +AA A P+  +SEWDR
Sbjct: 220 TAAAAALPQLPSSEWDR 236


>ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like isoform 2 [Solanum lycopersicum]
          Length = 235

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 49/74 (66%), Positives = 56/74 (75%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQGSA 209
           YFVSL+VVNN L+TNDRF VPVT AEFAVMRTAFSFALPHI+GWDR     PS S   S 
Sbjct: 163 YFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDR-FTNRPSESISQSP 221

Query: 208 ARAAPESQTSEWDR 167
           ++  P+   +EWDR
Sbjct: 222 SKVVPQLMEAEWDR 235


>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like isoform 1 [Solanum lycopersicum]
          Length = 238

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 49/74 (66%), Positives = 56/74 (75%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQGSA 209
           YFVSL+VVNN L+TNDRF VPVT AEFAVMRTAFSFALPHI+GWDR     PS S   S 
Sbjct: 166 YFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDR-FTNRPSESISQSP 224

Query: 208 ARAAPESQTSEWDR 167
           ++  P+   +EWDR
Sbjct: 225 SKVVPQLMEAEWDR 238


>ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum]
          Length = 238

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 48/74 (64%), Positives = 56/74 (75%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQGSA 209
           YF+SL+VVNN L+TNDRF VPVT AEFAVMRTAFSFALPHI+GWDR     PS S   S 
Sbjct: 166 YFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDR-FTNRPSESISQSP 224

Query: 208 ARAAPESQTSEWDR 167
           ++  P+   +EWDR
Sbjct: 225 SKVVPQLMEAEWDR 238


>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
           tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
           Full=Single-stranded DNA-bindig protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=StWHY2; Flags: Precursor
           gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
           tuberosum]
          Length = 238

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 48/74 (64%), Positives = 56/74 (75%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQGSA 209
           YF+SL+VVNN L+TNDRF VPVT AEFAVMRTAFSFALPHI+GWDR     PS S   S 
Sbjct: 166 YFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDR-FTNRPSESISQSP 224

Query: 208 ARAAPESQTSEWDR 167
           ++  P+   +EWDR
Sbjct: 225 SKVVPQLMEAEWDR 238


>ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 240

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLP-SRSNQGS 212
           +F+SL V NN+L+TN+RFVVPVT AEFAVM+TA SFALPH++GWDR   +LP S ++  S
Sbjct: 166 FFISLNVANNILKTNERFVVPVTTAEFAVMKTACSFALPHLMGWDRLTNQLPRSSTDSSS 225

Query: 211 AARAAPESQTSEWDR 167
           +++   +    EWD+
Sbjct: 226 SSKVDQQFLNLEWDK 240


>pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I)
           gi|347948613|pdb|3R9Z|A Chain A, Crystal Structure Of
           Stwhy2 K67a (Form Ii) gi|347948614|pdb|3RA0|A Chain A,
           Crystal Structure Of A Stwhy2 K67a-Dt32 Complex
          Length = 178

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDR 251
           YF+SL+VVNN L+TNDRF VPVT AEFAVMRTAFSFALPHI+GWDR
Sbjct: 120 YFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDR 165


>gb|ADL36848.1| WHY domain class transcription factor [Malus domestica]
          Length = 237

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQGSA 209
           YFVSLTVVNN+L+T + F VPV  AEFAVM+TA SFALPHI+GWDR   K+P+    G  
Sbjct: 162 YFVSLTVVNNLLKTRESFSVPVMTAEFAVMKTACSFALPHIMGWDRLTNKMPAGGGGGGG 221

Query: 208 ---ARAAPESQTSEWDR 167
              ++A P+    EWDR
Sbjct: 222 GQESKAVPQ-LLEEWDR 237


>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
           A, Crystal Structure Of A Stwhy2-Ere32 Complex
           gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
           Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
           Crystal Structure Of A Stwhy2-Cere32 Complex
           gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
           Stwhy2-Rcere32 Complex
          Length = 178

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDR 251
           YF+SL+VVNN L+TNDRF VPVT AEFAVMRTAFSFALPHI+GWDR
Sbjct: 120 YFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDR 165


>ref|XP_007019693.1| Whirly 2, putative isoform 1 [Theobroma cacao]
           gi|508725021|gb|EOY16918.1| Whirly 2, putative isoform 1
           [Theobroma cacao]
          Length = 236

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 40/74 (54%), Positives = 55/74 (74%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQGSA 209
           Y +SLTV NN+L++N+RF VP+T AEFAV++TA SFALPHIIGWD  +     +  +GS+
Sbjct: 164 YMISLTVSNNILKSNERFNVPITTAEFAVLKTACSFALPHIIGWD-WLTNHSRKGIEGSS 222

Query: 208 ARAAPESQTSEWDR 167
           ++  P+   SEWDR
Sbjct: 223 SKVNPKLLDSEWDR 236


>ref|XP_007200526.1| hypothetical protein PRUPE_ppa011529mg [Prunus persica]
           gi|462395926|gb|EMJ01725.1| hypothetical protein
           PRUPE_ppa011529mg [Prunus persica]
          Length = 207

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 42/74 (56%), Positives = 53/74 (71%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQGSA 209
           Y VSL VVNN+L+T + F+VPVTAAEFAVM+TA SF LPHI+GWDR M  +P+    G  
Sbjct: 136 YLVSLAVVNNLLKTKENFIVPVTAAEFAVMKTACSFVLPHIMGWDRLMSNMPTVVG-GQQ 194

Query: 208 ARAAPESQTSEWDR 167
           ++  P+    EWDR
Sbjct: 195 SKVVPQ-LLDEWDR 207


>ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Populus trichocarpa]
           gi|118484514|gb|ABK94132.1| unknown [Populus
           trichocarpa] gi|550342417|gb|EEE78292.2| hypothetical
           protein POPTR_0003s04700g [Populus trichocarpa]
          Length = 229

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQGSA 209
           YFVSL+VVNN+L+T +RF VPVT AEF V++TA SFALPHI+GWDR    LP  +     
Sbjct: 157 YFVSLSVVNNILKTTERFTVPVTTAEFTVLKTACSFALPHIMGWDRLTTPLPG-TLASKL 215

Query: 208 ARAAPESQTSEWDR 167
           ++  P+    EWD+
Sbjct: 216 SKVDPQMPDLEWDK 229


>ref|XP_004494755.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like [Cicer arietinum]
          Length = 233

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 43/75 (57%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDR-TMIKLPSRSNQGS 212
           YFVSL VVN VL T D F VPVT AEFAVM+TA SFALPHI+GWDR T  ++ S    G 
Sbjct: 159 YFVSLNVVNIVLNTKDSFSVPVTTAEFAVMKTACSFALPHIMGWDRLTNQQMQSNGTVGF 218

Query: 211 AARAAPESQTSEWDR 167
            ++  P+    EWD+
Sbjct: 219 QSKTNPQILDLEWDK 233


>ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258449 [Vitis vinifera]
           gi|297734756|emb|CBI16990.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTM-IKLPSRSNQGS 212
           YF+SL+VVNN+ +TN+R  VP+TAAEFAVM+TA SFALPHI+GWDR M  KLP       
Sbjct: 166 YFLSLSVVNNIQKTNERLAVPLTAAEFAVMQTACSFALPHILGWDRYMNQKLP------- 218

Query: 211 AARAAPESQTSEWDR 167
             R      T EWDR
Sbjct: 219 --RTEATPSTLEWDR 231


>ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825843 [Brachypodium
           distachyon]
          Length = 231

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLP-SRSNQGS 212
           YFV++TV+NNV +TN+R  VPVT AEFAVMRTA S+ALPHI+GWD+ +   P S +   S
Sbjct: 157 YFVNITVLNNVQKTNERLSVPVTKAEFAVMRTALSYALPHIMGWDQALTSHPQSPTAPAS 216

Query: 211 AARAAPESQTSEWDR 167
             R       SEW+R
Sbjct: 217 KPRVERPHPDSEWER 231


>ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
           mitochondrial-like [Setaria italica]
          Length = 229

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 39/74 (52%), Positives = 51/74 (68%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQGSA 209
           YFV++TV+NN+ +T DR  VP+T AEFAVMRTA SFALPHI+GWD+ + + P+     S 
Sbjct: 157 YFVNITVLNNMQKTTDRLSVPITKAEFAVMRTALSFALPHIMGWDQVLTRHPA-PQASSK 215

Query: 208 ARAAPESQTSEWDR 167
            R       SEW+R
Sbjct: 216 PRVERPHPDSEWER 229


>ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
           gi|482571469|gb|EOA35657.1| hypothetical protein
           CARUB_v10020880mg [Capsella rubella]
          Length = 235

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQG-- 215
           YF+SL V+N++L+TNDR VVPVT AEF VM+TAFSF LPH++GWDR    L  +   G  
Sbjct: 161 YFISLGVINSILKTNDRIVVPVTTAEFTVMKTAFSFVLPHLMGWDR----LTDQDGTGTQ 216

Query: 214 ---SAARAAPESQTSEWDR 167
              S     P+    EWD+
Sbjct: 217 RTTSHGNTDPQQLEQEWDK 235


>ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
           gi|482571468|gb|EOA35656.1| hypothetical protein
           CARUB_v10020880mg [Capsella rubella]
          Length = 234

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQG-- 215
           YF+SL V+N++L+TNDR VVPVT AEF VM+TAFSF LPH++GWDR    L  +   G  
Sbjct: 160 YFISLGVINSILKTNDRIVVPVTTAEFTVMKTAFSFVLPHLMGWDR----LTDQDGTGTQ 215

Query: 214 ---SAARAAPESQTSEWDR 167
              S     P+    EWD+
Sbjct: 216 RTTSHGNTDPQQLEQEWDK 234


>gb|ACU19178.1| unknown [Glycine max]
          Length = 235

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 41/74 (55%), Positives = 51/74 (68%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQGSA 209
           YFVSLTVV+N+L TND F VPVT AEFAVM+TA SFALPHI+GWD+ +    SR      
Sbjct: 163 YFVSLTVVDNLLNTNDYFSVPVTTAEFAVMKTACSFALPHIMGWDQ-ITNQQSRGIDDLQ 221

Query: 208 ARAAPESQTSEWDR 167
            +  P+    EW++
Sbjct: 222 VKGDPKVSDLEWEK 235


>ref|XP_007147230.1| hypothetical protein PHAVU_006G106800g [Phaseolus vulgaris]
           gi|561020453|gb|ESW19224.1| hypothetical protein
           PHAVU_006G106800g [Phaseolus vulgaris]
          Length = 243

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 41/74 (55%), Positives = 50/74 (67%)
 Frame = -3

Query: 388 YFVSLTVVNNVLQTNDRFVVPVTAAEFAVMRTAFSFALPHIIGWDRTMIKLPSRSNQGSA 209
           YFVSLTVVNN+L T D F VPVT AEFAVM+TA SFALPHI+GWD+ +    SR   G  
Sbjct: 171 YFVSLTVVNNLLNTKDYFSVPVTTAEFAVMKTACSFALPHIMGWDQ-ITNQQSRGTVGLQ 229

Query: 208 ARAAPESQTSEWDR 167
            +   +    EW++
Sbjct: 230 QKGGSQVLDLEWEK 243