BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00020581
         (1380 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU22186.1| hypothetical protein MIMGU_mgv1a005737mg [Mimulus...   619   e-175
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi...   533   e-149
ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containi...   530   e-148
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi...   520   e-145
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr...   520   e-145
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   508   e-141
gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]       506   e-141
ref|XP_007210500.1| hypothetical protein PRUPE_ppa002676mg [Prun...   503   e-140
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]     502   e-139
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   502   e-139
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   501   e-139
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi...   492   e-136
ref|XP_002321639.2| pentatricopeptide repeat-containing family p...   489   e-135
ref|XP_007155484.1| hypothetical protein PHAVU_003G205300g [Phas...   481   e-133
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   480   e-133
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps...   458   e-126
ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containi...   451   e-124
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar...   451   e-124
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ...   448   e-123
ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutr...   439   e-120

>gb|EYU22186.1| hypothetical protein MIMGU_mgv1a005737mg [Mimulus guttatus]
          Length = 472

 Score =  619 bits (1597), Expect = e-175
 Identities = 299/423 (70%), Positives = 351/423 (82%), Gaps = 1/423 (0%)
 Frame = +2

Query: 2    VKEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSL 181
            VK+V+DV+KS  WG              SDN  LRVFKELRGKG P KA+ FFKWVERSL
Sbjct: 49   VKQVVDVVKSDEWGENVESQLSNMEITVSDNFALRVFKELRGKGYPAKAFEFFKWVERSL 108

Query: 182  GFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDC 361
             FKHNGVTYNG+LRVLCWE++IS+FW V++EMK AGFE+D+DTYIKVSRQLQKNKM+ D 
Sbjct: 109  NFKHNGVTYNGILRVLCWEDSISEFWFVMDEMKGAGFELDIDTYIKVSRQLQKNKMLGDA 168

Query: 362  VKLYEHMMDSSYKPSDSECSLILRAIAG-SSVDIDLVNRVFNKYEASGKPFSKSIYDGIH 538
            V LYEHMMDSS+KPS +EC+ +LR IA  ++ D+DLV RV NKYEA+G  FSK+IYDGIH
Sbjct: 169  VNLYEHMMDSSFKPSFTECNSLLRTIATYTTPDLDLVFRVVNKYEAAGYSFSKNIYDGIH 228

Query: 539  RCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCK 718
            R LTSLG FDEAEKIVE M   G+EPDNITYSQ+VFG CK+R F+EA ++LD+MEE GC 
Sbjct: 229  RSLTSLGKFDEAEKIVEAMIKAGFEPDNITYSQLVFGLCKSRMFEEATKVLDVMEEQGCV 288

Query: 719  PDIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXX 898
            PDIKTWTILIKGHCAA++++KAL+ FAKM EKGFDADADLLDVLI GF+ QS  +GA+  
Sbjct: 289  PDIKTWTILIKGHCAADQIDKALLCFAKMMEKGFDADADLLDVLINGFLSQSRILGAHTV 348

Query: 899  XXXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFG 1078
                       PWQ+TYKNLIQKLL ERK+E+AM+LLR+MK+HNYPPFPEPFV+ ISKFG
Sbjct: 349  LVELVAKARLRPWQSTYKNLIQKLLNERKLEQAMELLRLMKRHNYPPFPEPFVRYISKFG 408

Query: 1079 SVEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLF 1258
            SVE+A EFL AL+VKE+PTVSAYQH+F+SFF+E RHSEAKDLLFKCPHH+RKHPAIS+LF
Sbjct: 409  SVEEAKEFLMALSVKEYPTVSAYQHVFKSFFDESRHSEAKDLLFKCPHHIRKHPAISALF 468

Query: 1259 GSA 1267
            GSA
Sbjct: 469  GSA 471


>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Solanum lycopersicum]
          Length = 642

 Score =  533 bits (1374), Expect = e-149
 Identities = 260/422 (61%), Positives = 323/422 (76%), Gaps = 1/422 (0%)
 Frame = +2

Query: 5    KEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLG 184
            K+V ++I    WG              SDN +LRV KELR  G+PLKA++FFKWV R+L 
Sbjct: 203  KDVSELITKQEWGVEVERQLGEMKLSVSDNFVLRVLKELREVGNPLKAFSFFKWVARNLD 262

Query: 185  FKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCV 364
            F+H+ VTYNG+LRVLC EE+I +FW V++EM + GFE+DLDTYIK+SR  QK KM++D V
Sbjct: 263  FQHSTVTYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAV 322

Query: 365  KLYEHMMDSSYKPSDSECSLILRAIAGS-SVDIDLVNRVFNKYEASGKPFSKSIYDGIHR 541
            +LYE MMD  +KPS  EC+++LR+IA S S D+DL+ RV  K+EA+G   SK IYD IHR
Sbjct: 323  ELYELMMDGQFKPSLGECNILLRSIAQSYSSDLDLLFRVVEKFEAAGHSRSKIIYDVIHR 382

Query: 542  CLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCKP 721
            CLT+LG F+EAEKI E M++ G+EPDNITYSQ+++G CK RR +EA++++D+MEE GC P
Sbjct: 383  CLTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLCKVRRLEEASKVIDVMEECGCIP 442

Query: 722  DIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXXX 901
            DIKTWT+LI+GHC A EV+KAL  FAKM EK  D DADLLDVL+ GF+ Q    GAY   
Sbjct: 443  DIKTWTVLIQGHCFAGEVDKALFCFAKMMEKNVDTDADLLDVLLNGFLSQRRVFGAYQLL 502

Query: 902  XXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFGS 1081
                      PWQATYK +IQKLL ERK EEA+ LLR MKKHNYPPFPEPF+Q ISK G+
Sbjct: 503  TELVNKFQMRPWQATYKLVIQKLLGERKFEEALDLLRRMKKHNYPPFPEPFLQYISKSGT 562

Query: 1082 VEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLFG 1261
            VEDA EFL AL+VK++P+VSAYQH+FQSFF EGRHSEAKDLL+KCP+H+R+HPAI  LFG
Sbjct: 563  VEDAVEFLKALSVKDYPSVSAYQHVFQSFFAEGRHSEAKDLLYKCPYHIRQHPAICGLFG 622

Query: 1262 SA 1267
            S+
Sbjct: 623  SS 624



 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 109/485 (22%), Positives = 182/485 (37%), Gaps = 81/485 (16%)
 Frame = +2

Query: 14   IDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLGFKH 193
            +D+I S+ W               +   ++ + K+L  +  P KA +F KWV +  GFK 
Sbjct: 69   VDIILSNDWSKQLEKDLGKNDFPVTHEAVMYLLKKLDKE--PRKAGDFLKWVVKQKGFKP 126

Query: 194  NGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCVKL- 370
            +   Y+ MLR+    +++  FW  ++EMK  GF +D +TY  +    +  KM  D   L 
Sbjct: 127  SSSMYSLMLRIYANRDSMKDFWTTIKEMKENGFYIDEETYKSIYSIFRNLKMETDATALK 186

Query: 371  --YEHMM----------DSSYKPSDSECSLILRAIAGS---SVDIDLVNRVFNKYEASGK 505
              Y  M+          D S   +  E  + +    G    SV  + V RV  +    G 
Sbjct: 187  HFYGRMIKDNAMGDVAKDVSELITKQEWGVEVERQLGEMKLSVSDNFVLRVLKELREVGN 246

Query: 506  PF-----------------SKSIYDGIHRCLTSLGMFDEAEKIVEKMKNDGYEPDNITYS 634
            P                  S   Y+GI R L      +E   +V++M + G+E D  TY 
Sbjct: 247  PLKAFSFFKWVARNLDFQHSTVTYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYI 306

Query: 635  QIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHCAANEVEKALVY--FAKMT 808
            +I   + K +   +A E+ ++M +   KP +    IL++    +   +  L++    K  
Sbjct: 307  KISRHFQKIKMLKDAVELYELMMDGQFKPSLGECNILLRSIAQSYSSDLDLLFRVVEKFE 366

Query: 809  EKGFDADADLLDVL------IGGFMGQSHTVGAYXXXXXXXXXXXXXPWQATYKNLIQKL 970
              G      + DV+      +G F        A              P   TY  LI  L
Sbjct: 367  AAGHSRSKIIYDVIHRCLTNLGRFEEAEKITEA-------MRDAGFEPDNITYSQLIYGL 419

Query: 971  LEERKIEEAMKLLRMMKK----------------HNYPPFPEPFVQCISKF--------- 1075
             + R++EEA K++ +M++                H +    +  + C +K          
Sbjct: 420  CKVRRLEEASKVIDVMEECGCIPDIKTWTVLIQGHCFAGEVDKALFCFAKMMEKNVDTDA 479

Query: 1076 -------------GSVEDAWEFLTALTVK--EHPTVSAYQHIFQSFFNEGRHSEAKDLLF 1210
                           V  A++ LT L  K    P  + Y+ + Q    E +  EA DLL 
Sbjct: 480  DLLDVLLNGFLSQRRVFGAYQLLTELVNKFQMRPWQATYKLVIQKLLGERKFEEALDLLR 539

Query: 1211 KCPHH 1225
            +   H
Sbjct: 540  RMKKH 544


>ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 642

 Score =  530 bits (1365), Expect = e-148
 Identities = 258/422 (61%), Positives = 320/422 (75%), Gaps = 1/422 (0%)
 Frame = +2

Query: 5    KEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLG 184
            K+V ++I    WG              SDN +LRV KELR  G PLKA++FFKWV R+L 
Sbjct: 203  KDVSELITKHEWGVEVERQLGEMKLPVSDNFVLRVLKELREIGYPLKAFSFFKWVARNLD 262

Query: 185  FKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCV 364
            F+H  +TYNG+LRVLC EE+I +FW V++EM + GFE+DLDTYIK+SR  QK KM++D V
Sbjct: 263  FQHTTITYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAV 322

Query: 365  KLYEHMMDSSYKPSDSECSLILRAIAGSSV-DIDLVNRVFNKYEASGKPFSKSIYDGIHR 541
            +LYE MMD  +KPS  EC+++LR+IA S   D+DL+ RV  K+EA+G   SK IYD IHR
Sbjct: 323  ELYELMMDGQFKPSLGECNILLRSIAQSHPSDLDLLFRVVEKFEAAGHSRSKIIYDVIHR 382

Query: 542  CLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCKP 721
            CLT+LG F+EAEKI E M++ G+EPDNITYSQ+++G CK RR +EA++++D+MEE GC P
Sbjct: 383  CLTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLCKVRRLEEASKVIDVMEECGCIP 442

Query: 722  DIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXXX 901
            DIKTWT+LI+GHC A EV+KAL  FAKM E+  D DADLLDVL+ GF+ Q    GAY   
Sbjct: 443  DIKTWTVLIQGHCFAGEVDKALFCFAKMMERNVDTDADLLDVLLNGFLSQRRVFGAYQLL 502

Query: 902  XXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFGS 1081
                      PWQATYK +IQKLL ERK EEA+ LLR MKKHNYPPFPEPF+Q ISK G+
Sbjct: 503  TELVNKFQMRPWQATYKLVIQKLLGERKFEEALDLLRRMKKHNYPPFPEPFLQYISKSGT 562

Query: 1082 VEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLFG 1261
            VEDA EFL AL+VK++P+VSAYQH+FQSFF EGRHSEAKDLL+KCPHH+R+HPAI  LFG
Sbjct: 563  VEDAVEFLKALSVKDYPSVSAYQHVFQSFFAEGRHSEAKDLLYKCPHHIRQHPAICGLFG 622

Query: 1262 SA 1267
            S+
Sbjct: 623  SS 624



 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 111/485 (22%), Positives = 187/485 (38%), Gaps = 81/485 (16%)
 Frame = +2

Query: 14   IDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLGFKH 193
            +D+I S+ W               +   ++ + K+L  +  P KA +F KWV +  GFK 
Sbjct: 69   VDIILSNDWSKQLEKDLGKNDLPVTHEAVMYLLKKLDKE--PQKAGDFLKWVVKQNGFKP 126

Query: 194  NGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCVKL- 370
            +   Y+ MLR+    +++  FW  ++EMK  GF +D +TY  +    +  KM  D   L 
Sbjct: 127  SSSMYSLMLRIYANRDSMKDFWTTIKEMKENGFYIDEETYKSIHSIFRNLKMETDATALK 186

Query: 371  --YEHMM-DSSYKPSDSECS-LILRAIAGSSVDIDL-----------VNRVFNKYEASGK 505
              Y  M+ D++      + S LI +   G  V+  L           V RV  +    G 
Sbjct: 187  HFYGRMIKDNAMGDVAKDVSELITKHEWGVEVERQLGEMKLPVSDNFVLRVLKELREIGY 246

Query: 506  P-----FSKSI------------YDGIHRCLTSLGMFDEAEKIVEKMKNDGYEPDNITYS 634
            P     F K +            Y+GI R L      +E   +V++M + G+E D  TY 
Sbjct: 247  PLKAFSFFKWVARNLDFQHTTITYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYI 306

Query: 635  QIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHCAANEVEKALVY--FAKMT 808
            +I   + K +   +A E+ ++M +   KP +    IL++    ++  +  L++    K  
Sbjct: 307  KISRHFQKIKMLKDAVELYELMMDGQFKPSLGECNILLRSIAQSHPSDLDLLFRVVEKFE 366

Query: 809  EKGFDADADLLDVL------IGGFMGQSHTVGAYXXXXXXXXXXXXXPWQATYKNLIQKL 970
              G      + DV+      +G F        A              P   TY  LI  L
Sbjct: 367  AAGHSRSKIIYDVIHRCLTNLGRFEEAEKITEA-------MRDAGFEPDNITYSQLIYGL 419

Query: 971  LEERKIEEAMKLLRMMKK----------------HNYPPFPEPFVQCISKF--------- 1075
             + R++EEA K++ +M++                H +    +  + C +K          
Sbjct: 420  CKVRRLEEASKVIDVMEECGCIPDIKTWTVLIQGHCFAGEVDKALFCFAKMMERNVDTDA 479

Query: 1076 -------------GSVEDAWEFLTALTVK--EHPTVSAYQHIFQSFFNEGRHSEAKDLLF 1210
                           V  A++ LT L  K    P  + Y+ + Q    E +  EA DLL 
Sbjct: 480  DLLDVLLNGFLSQRRVFGAYQLLTELVNKFQMRPWQATYKLVIQKLLGERKFEEALDLLR 539

Query: 1211 KCPHH 1225
            +   H
Sbjct: 540  RMKKH 544


>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Citrus sinensis]
          Length = 639

 Score =  520 bits (1340), Expect = e-145
 Identities = 256/422 (60%), Positives = 313/422 (74%), Gaps = 1/422 (0%)
 Frame = +2

Query: 5    KEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLG 184
            K ++DV+  S W               SDN +L V KELR    P+KA  FF+WV    G
Sbjct: 204  KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY--PVKALGFFRWVGEHSG 261

Query: 185  FKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCV 364
            +KHN +TYNG+LRVL   E++  FW V+EEMK  G+EMD+DTYIK+SRQ QK +M+ED V
Sbjct: 262  YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321

Query: 365  KLYEHMMDSSYKPSDSECSLILRAIAG-SSVDIDLVNRVFNKYEASGKPFSKSIYDGIHR 541
            KL+E MMD  YKPS  +CSL+LR+I+  ++ D+ LV RV NKYE+ G   SKS+YDGIHR
Sbjct: 322  KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381

Query: 542  CLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCKP 721
             LT LG FDEAEKI++ MKN G+EPDNITYSQ++FG CKA  F++A  +LD MEENGC P
Sbjct: 382  ALTKLGRFDEAEKIMKAMKNAGFEPDNITYSQVIFGLCKAGSFEDACNVLDEMEENGCIP 441

Query: 722  DIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXXX 901
            DIK+WTILI+GHCAANEV++AL+ FAKM EK +DADADLLDVLI GF+ Q    GAY   
Sbjct: 442  DIKSWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501

Query: 902  XXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFGS 1081
                      PWQAT+K LI+KLL  R++EEAM LLR+MKK NYPPFPEPFVQ ISKFG+
Sbjct: 502  VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT 561

Query: 1082 VEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLFG 1261
            VEDA EFL AL+VKE+P+ +AY  +F+SFFNEGRH EAKDLL+KCPHH+R+   IS LFG
Sbjct: 562  VEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFG 621

Query: 1262 SA 1267
            SA
Sbjct: 622  SA 623



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 82/359 (22%), Positives = 141/359 (39%), Gaps = 36/359 (10%)
 Frame = +2

Query: 137  PLKAYNFFKWVERSLGFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYI 316
            P KA  FF WV     F+ +   Y+ MLR L  ++++ +FW  L  MK     ++ +TY+
Sbjct: 109  PQKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYL 168

Query: 317  KVSRQLQKNKMVEDCVKLYEHMMDSSYK--PSDSECSLILRAIAGSSVDIDLVNRV---- 478
             +   L+K K   D   L     D   K    D+    ++  + GS  D  +  ++    
Sbjct: 169  SILGVLKKAKKASDLAAL-NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMK 227

Query: 479  ------------------------FNKY--EASGKPFSKSIYDGIHRCLTSLGMFDEAEK 580
                                    F ++  E SG   +   Y+GI R L       +   
Sbjct: 228  IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287

Query: 581  IVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHC 760
            +VE+MK +GYE D  TY +I   + K R  ++A ++ + M +   KP ++  ++L++   
Sbjct: 288  VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347

Query: 761  AANEVEKALVY-FAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXXXXXXXXXXXXXPW 937
            + N  +  LV+  A   E             +G  + +S                     
Sbjct: 348  SINNPDLGLVFRVANKYES------------LGNSLSKS--------------------- 374

Query: 938  QATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCI---SKFGSVEDAWEFL 1105
               Y  + + L +  + +EA K+++ MK   + P    + Q I    K GS EDA   L
Sbjct: 375  --VYDGIHRALTKLGRFDEAEKIMKAMKNAGFEPDNITYSQVIFGLCKAGSFEDACNVL 431


>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
            gi|557542189|gb|ESR53167.1| hypothetical protein
            CICLE_v10019266mg [Citrus clementina]
          Length = 639

 Score =  520 bits (1339), Expect = e-145
 Identities = 255/422 (60%), Positives = 313/422 (74%), Gaps = 1/422 (0%)
 Frame = +2

Query: 5    KEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLG 184
            K ++DV+  S W               SDN +L V KELR    P+KA  FF+WV    G
Sbjct: 204  KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY--PVKALGFFRWVGEHSG 261

Query: 185  FKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCV 364
            +KHN +TYNG+LRVL   E++  FW V+EEMK  G+EMD+DTYIK+SRQ QK +++ED V
Sbjct: 262  YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRIMEDAV 321

Query: 365  KLYEHMMDSSYKPSDSECSLILRAIAG-SSVDIDLVNRVFNKYEASGKPFSKSIYDGIHR 541
            KL+E MMD  YKPS  +CSL+LR+I+  ++ D+ LV RV NKYE+ G   SKS+YDGIHR
Sbjct: 322  KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381

Query: 542  CLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCKP 721
             LT LG FDEAEK+++ MKN G+EPDNITYSQ++FG CKA RF++A  +LD MEENGC P
Sbjct: 382  ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441

Query: 722  DIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXXX 901
            DIKTWTILI+GHCAANEV++AL+ FAKM EK +DADADLLDVLI GF+ Q    GAY   
Sbjct: 442  DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501

Query: 902  XXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFGS 1081
                      PWQAT+K LI+KLL  R++EEAM LLR+MKK NYPPFPEPFVQ ISKFG+
Sbjct: 502  VEMIEKVHLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT 561

Query: 1082 VEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLFG 1261
             EDA EFL AL+VKE+P+ +AY  +F+SFFNEGRH EAKDLL+KCPHH+R+   IS LFG
Sbjct: 562  AEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFG 621

Query: 1262 SA 1267
            SA
Sbjct: 622  SA 623



 Score = 73.9 bits (180), Expect = 2e-10
 Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 32/251 (12%)
 Frame = +2

Query: 137 PLKAYNFFKWVERSLGFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYI 316
           P KA  FF WV     F+ +   Y+ MLR L  ++++ +FW  L  MK     ++ +TY+
Sbjct: 109 PEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYL 168

Query: 317 KVSRQLQKNKMVEDCVKLYEHMMDSSYK--PSDSECSLILRAIAGSSVDIDLVNRV---- 478
            +   L+K K   D   L     D   K    D+    ++  + GS  D  +  ++    
Sbjct: 169 SILGVLKKAKKASDLAAL-NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMK 227

Query: 479 ------------------------FNKY--EASGKPFSKSIYDGIHRCLTSLGMFDEAEK 580
                                   F ++  E SG   +   Y+GI R L       +   
Sbjct: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287

Query: 581 IVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHC 760
           +VE+MK +GYE D  TY +I   + K R  ++A ++ + M +   KP ++  ++L++   
Sbjct: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRIMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347

Query: 761 AANEVEKALVY 793
           + N  +  LV+
Sbjct: 348 SINNPDLGLVF 358


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  508 bits (1308), Expect = e-141
 Identities = 251/423 (59%), Positives = 312/423 (73%), Gaps = 1/423 (0%)
 Frame = +2

Query: 2    VKEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSL 181
            VK V+ V+ ++ W               +DN ++RV KELR    PLKA  FF W  +  
Sbjct: 200  VKNVVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNY--PLKALQFFNWAGKCE 257

Query: 182  GFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDC 361
             ++ N +TYN + RVL  +++I +FW V+EEMKNAG EMD+DTYIK+SRQ QKNK++ D 
Sbjct: 258  RYECNTITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGDA 317

Query: 362  VKLYEHMMDSSYKPSDSECSLILRAIAGSSV-DIDLVNRVFNKYEASGKPFSKSIYDGIH 538
            VKLYE MMD  +KPS  +CS++LR+I+ S+  D++LV RV NKYEA+G   SK++YDGIH
Sbjct: 318  VKLYEFMMDGPFKPSVQDCSMLLRSISASNYPDLNLVFRVVNKYEATGNSLSKAVYDGIH 377

Query: 539  RCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCK 718
            R LTS+G FDEA K+++ M+  GYEPDNITYSQ+VFG CKARR +EA E+LD ME +GC 
Sbjct: 378  RSLTSIGNFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCKARRLEEACEVLDEMEAHGCL 437

Query: 719  PDIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXX 898
            PDIKTWTILI+GHC ANEV KAL+  AKM EK  D DADLL VLI  F+ Q    GAY  
Sbjct: 438  PDIKTWTILIQGHCVANEVGKALMCLAKMMEKHCDPDADLLAVLINAFLSQKRIDGAYTL 497

Query: 899  XXXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFG 1078
                       PWQATYK LI+KLLE RK+EEA+ LLR+MK+HN+PPFPEPFVQ IS+FG
Sbjct: 498  FMDMVDKARLRPWQATYKLLIEKLLEVRKLEEALNLLRLMKQHNHPPFPEPFVQYISRFG 557

Query: 1079 SVEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLF 1258
            +V+DA +FL AL+VKE+P+ SAY ++FQSFF  GRHSEAKDLLFKCPHH+RKHP IS LF
Sbjct: 558  TVDDAADFLKALSVKEYPSTSAYLNVFQSFFRAGRHSEAKDLLFKCPHHIRKHPKISELF 617

Query: 1259 GSA 1267
            GSA
Sbjct: 618  GSA 620



 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 89/377 (23%), Positives = 160/377 (42%), Gaps = 34/377 (9%)
 Frame = +2

Query: 11   VIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLGFK 190
            +++++  + W               +   ++ V K+L     P KA++FF WV    GFK
Sbjct: 66   LVELLSVNDWSPELETQLENSSPLLTHETVIYVLKKL--DKDPHKAWDFFNWVCDRNGFK 123

Query: 191  HNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCV-- 364
             +   Y+ MLR+L  ++++  FW  L +MK  GF  D +TY+ +    +K +M  D V  
Sbjct: 124  PSSPLYSLMLRILVKKDSMKNFWITLRKMKEQGFYTDEETYLTILGVFRKERMDSDAVAF 183

Query: 365  ------KLYEHMMDSSYKPSDSECSL------ILRAIAGSSVDI--DLVNRVFNK----- 487
                   + E+ MDS  K   S  S       + + + G  + +  + V RV  +     
Sbjct: 184  KHFFDRMVEENAMDSVVKNVVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNYP 243

Query: 488  ------YEASGK----PFSKSIYDGIHRCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQ 637
                  +  +GK      +   Y+ I R L       E   +VE+MKN G+E D  TY +
Sbjct: 244  LKALQFFNWAGKCERYECNTITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIK 303

Query: 638  IVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHCAANEVEKALVYFAKMTEKG 817
            I   + K +   +A ++ + M +   KP ++  ++L++   A+N  +  LV+  ++  K 
Sbjct: 304  ISRQFQKNKLMGDAVKLYEFMMDGPFKPSVQDCSMLLRSISASNYPDLNLVF--RVVNKY 361

Query: 818  FDADADLLDVLIGGFMGQSHTVGAY---XXXXXXXXXXXXXPWQATYKNLIQKLLEERKI 988
                  L   +  G      ++G +                P   TY  L+  L + R++
Sbjct: 362  EATGNSLSKAVYDGIHRSLTSIGNFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCKARRL 421

Query: 989  EEAMKLLRMMKKHNYPP 1039
            EEA ++L  M+ H   P
Sbjct: 422  EEACEVLDEMEAHGCLP 438


>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
          Length = 627

 Score =  506 bits (1303), Expect = e-141
 Identities = 242/421 (57%), Positives = 310/421 (73%), Gaps = 2/421 (0%)
 Frame = +2

Query: 2    VKEVIDVIKSSG-WGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERS 178
            VKEV+DV+     WG              SDNL+LR+ K+LRG+G  +KAY FFKW+E S
Sbjct: 203  VKEVVDVVGGGDHWGEKVEAKLREMNIAVSDNLVLRILKQLRGQGCAVKAYRFFKWIESS 262

Query: 179  LGFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVED 358
              F+H  VTYNG+LR+LC EE+I +FW V  EM  AGF +D+DTY+KVSR  QKN M ED
Sbjct: 263  SDFEHTTVTYNGVLRILCREESIDEFWNVFSEMNAAGFRLDIDTYVKVSRSFQKNAMFED 322

Query: 359  CVKLYEHMMDSSYKPSDSECSLILRAIAG-SSVDIDLVNRVFNKYEASGKPFSKSIYDGI 535
             VKLYEHMMDS YKPS SEC+ +L+A++   S D+ L++RV  K+ A G   SK++YDGI
Sbjct: 323  GVKLYEHMMDSPYKPSVSECNYLLQALSRHGSPDLGLIDRVIEKFVAGGNSLSKTLYDGI 382

Query: 536  HRCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGC 715
            HR LT LG F+EAE IVEKM+ +G+EPDN+TYSQ+VFG CK  RFDEAA +L+ ME+ GC
Sbjct: 383  HRSLTRLGKFEEAEGIVEKMRENGFEPDNVTYSQLVFGLCKFDRFDEAAGVLESMEKWGC 442

Query: 716  KPDIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYX 895
            KPDI TWTILI+GH    E +KA+++FA+M EKGFD DADLL+ ++     +S    A+ 
Sbjct: 443  KPDIMTWTILIRGHFKGGETDKAMLHFARMMEKGFDPDADLLEAIVDELSKKSRAPDAFR 502

Query: 896  XXXXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKF 1075
                        PWQ+T+KNLIQ+LL+ R+ EEA++LL MMK+ NYPP  EPFV  +SKF
Sbjct: 503  LLVELAEKLKLRPWQSTFKNLIQQLLDGRRFEEAVRLLAMMKRQNYPPHCEPFVDYVSKF 562

Query: 1076 GSVEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSL 1255
            GSV+DA EFL++LTVKE+P++S+Y+H+F +F NE RHSEAKDLLF+CPHHVRKHPA+ SL
Sbjct: 563  GSVDDALEFLSSLTVKEYPSISSYRHVFGAFLNENRHSEAKDLLFRCPHHVRKHPAVCSL 622

Query: 1256 F 1258
            F
Sbjct: 623  F 623


>ref|XP_007210500.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
            gi|462406235|gb|EMJ11699.1| hypothetical protein
            PRUPE_ppa002676mg [Prunus persica]
          Length = 646

 Score =  503 bits (1296), Expect = e-140
 Identities = 249/421 (59%), Positives = 308/421 (73%), Gaps = 1/421 (0%)
 Frame = +2

Query: 5    KEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLG 184
            K+V DV+  S W               SDN ++RV KELR    P KA +FF WV +S G
Sbjct: 220  KKVADVVSGSEWSAGIEKELGELKITLSDNFVVRVLKELRI--CPSKALSFFHWVGQSSG 277

Query: 185  FKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCV 364
            ++HN +TYN + R+L   ++I +FW V+EEMK AG E+DLDTYIK++RQ QK+KM+ED V
Sbjct: 278  YEHNTITYNAVARILAQADSIGEFWSVIEEMKGAGHELDLDTYIKITRQFQKSKMMEDAV 337

Query: 365  KLYEHMMDSSYKPSDSECSLILRAI-AGSSVDIDLVNRVFNKYEASGKPFSKSIYDGIHR 541
            KLYE MMD  YKPS  +CS++LR+I A    D+D+V RV  K+E++G   SK++YDGIHR
Sbjct: 338  KLYELMMDGPYKPSAQDCSMLLRSISANDKPDLDMVFRVAKKFESAGNTLSKAVYDGIHR 397

Query: 542  CLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCKP 721
             LTS G FDEAEKI + M+N GYEPDNITYSQ+VFG CKA+R +EA ++LD ME NGC P
Sbjct: 398  SLTSAGSFDEAEKITKVMRNAGYEPDNITYSQLVFGLCKAKRLEEACKVLDEMEANGCVP 457

Query: 722  DIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXXX 901
            DI TWTILI+GHCAANEV+ ALV FAKM EKG DADADLLDVLI GF+ Q    GAY   
Sbjct: 458  DIMTWTILIQGHCAANEVDTALVCFAKMIEKGCDADADLLDVLINGFLKQRKIEGAYKLL 517

Query: 902  XXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFGS 1081
                      PWQATYKNLI+ LL  RK++EA  LL +MKK +YPP+P+PFVQ +SKFGS
Sbjct: 518  IEMVNMTRLRPWQATYKNLIENLLGVRKLDEAFALLHLMKKQSYPPYPDPFVQYLSKFGS 577

Query: 1082 VEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLFG 1261
            VEDA EF  AL+VKE+P+ +AY H+F+SFF EGR SEAK+LL+KCP+H+RK   IS LFG
Sbjct: 578  VEDAAEFFKALSVKEYPSSAAYVHVFKSFFKEGRDSEAKELLYKCPYHIRKLGEISKLFG 637

Query: 1262 S 1264
            S
Sbjct: 638  S 638



 Score =  103 bits (256), Expect = 2e-19
 Identities = 84/379 (22%), Positives = 167/379 (44%), Gaps = 36/379 (9%)
 Frame = +2

Query: 11   VIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLGFK 190
            V+ ++ ++ W               + + ++ V K+L     P KA++FF WV    GFK
Sbjct: 85   VLQLVLANQWSAELENELSESYPSLTHDAVIYVLKKL--DKDPKKAWDFFNWVCEKNGFK 142

Query: 191  HNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCV-- 364
             + + +N ML VL  ++++ +FW  L +MK  GF +++ TY  ++ +L+K KM  D V  
Sbjct: 143  PSSLVFNLMLGVLGHKDSMKQFWITLRQMKEQGFYIEVQTYSAIAERLKKGKMDNDVVAF 202

Query: 365  -KLYEHMMDSSYKPSDSECSLILRAIAGS---------------SVDIDLVNRVFNKY-- 490
               +E MM  +   +D     +   ++GS               ++  + V RV  +   
Sbjct: 203  KHFFERMMKDN--ATDEVAKKVADVVSGSEWSAGIEKELGELKITLSDNFVVRVLKELRI 260

Query: 491  -------------EASGKPFSKSIYDGIHRCLTSLGMFDEAEKIVEKMKNDGYEPDNITY 631
                         ++SG   +   Y+ + R L       E   ++E+MK  G+E D  TY
Sbjct: 261  CPSKALSFFHWVGQSSGYEHNTITYNAVARILAQADSIGEFWSVIEEMKGAGHELDLDTY 320

Query: 632  SQIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHCAANEVEKALVYFAKMTE 811
             +I   + K++  ++A ++ ++M +   KP  +  ++L++   A ++ +  +V+  ++ +
Sbjct: 321  IKITRQFQKSKMMEDAVKLYELMMDGPYKPSAQDCSMLLRSISANDKPDLDMVF--RVAK 378

Query: 812  KGFDADADLLDVLIGGFMGQSHTVGAY---XXXXXXXXXXXXXPWQATYKNLIQKLLEER 982
            K   A   L   +  G      + G++                P   TY  L+  L + +
Sbjct: 379  KFESAGNTLSKAVYDGIHRSLTSAGSFDEAEKITKVMRNAGYEPDNITYSQLVFGLCKAK 438

Query: 983  KIEEAMKLLRMMKKHNYPP 1039
            ++EEA K+L  M+ +   P
Sbjct: 439  RLEEACKVLDEMEANGCVP 457


>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
          Length = 628

 Score =  502 bits (1293), Expect = e-139
 Identities = 248/422 (58%), Positives = 309/422 (73%), Gaps = 1/422 (0%)
 Frame = +2

Query: 2    VKEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSL 181
            VK+V+DV+    W               SDN++LRV K LR    P KA +FF+WV R  
Sbjct: 201  VKKVVDVVLGLQWSDEVEKQLGKIIVDLSDNIVLRVLKGLRTY--PSKASSFFRWVGRYP 258

Query: 182  GFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDC 361
            G++HN VTYN   RVL  +++I +FW ++EEMK AG+++D+D YIK+SRQ QK+KM+ED 
Sbjct: 259  GYEHNSVTYNAAARVLSRDDSIGEFWGMIEEMKGAGYDLDIDNYIKISRQFQKSKMMEDS 318

Query: 362  VKLYEHMMDSSYKPSDSECSLILRAI-AGSSVDIDLVNRVFNKYEASGKPFSKSIYDGIH 538
            VKLYE MMD  +KPS  +C+L+LR+I AG + D  L  RV  KYE++G+  SK+ YDGIH
Sbjct: 319  VKLYEFMMDGPFKPSAQDCNLLLRSISAGDNPDCSLAFRVAKKYESTGRTLSKAAYDGIH 378

Query: 539  RCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCK 718
            R LTS G FDEAEK+++ M+N GYEPDNITYSQ+VFG CKARR +EA  +LD ME NGC 
Sbjct: 379  RSLTSAGRFDEAEKMMKVMRNAGYEPDNITYSQLVFGLCKARRLEEARRVLDEMEANGCT 438

Query: 719  PDIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXX 898
            PDIKTWTILI+GHC+A EV+K L+ F KM E+  + D DLLDVLI GF+ Q    GAY  
Sbjct: 439  PDIKTWTILIQGHCSAGEVDKGLMCFMKMMEEDCNVDGDLLDVLIKGFLSQRKIKGAYDL 498

Query: 899  XXXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFG 1078
                       PWQATYKNLI+K+LE RK+EEAM LLR+MKKH YPP+ +PFV  ISKFG
Sbjct: 499  LIELVDKARVIPWQATYKNLIEKMLEVRKLEEAMNLLRLMKKHKYPPYHDPFVPYISKFG 558

Query: 1079 SVEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLF 1258
            +VE+A EFL AL+VK++P+ SAY HIF+SFF EGRHSEAKDLLFKCPHH+RKH  I+ LF
Sbjct: 559  TVEEAAEFLKALSVKKNPSPSAYFHIFESFFREGRHSEAKDLLFKCPHHIRKHRDIAKLF 618

Query: 1259 GS 1264
            GS
Sbjct: 619  GS 620



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 79/378 (20%), Positives = 155/378 (41%), Gaps = 35/378 (9%)
 Frame = +2

Query: 11   VIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLGFK 190
            V++++ ++ W               +   ++ V K+L    +P KA  FF WV +  GF+
Sbjct: 68   VVELVLANEWSTELENELDDSNLGWTHERVIYVLKKL--DKNPQKASVFFNWVSQKDGFR 125

Query: 191  HNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCVKL 370
             + + Y+ MLR+L  ++ + +FW  L +MK   F +D +T+  +  QL K KM  D V L
Sbjct: 126  PSSLLYSLMLRILVLKD-MKRFWATLAKMKEQSFYIDEETFDSILAQLVKEKMTNDVVAL 184

Query: 371  YEHMMDSSYKPS--DSECSLILRAIAG-----------SSVDIDLVNRV-------FNKY 490
              H  D   + +  DS    ++  + G             + +DL + +          Y
Sbjct: 185  -RHFNDRMIEDNAMDSVVKKVVDVVLGLQWSDEVEKQLGKIIVDLSDNIVLRVLKGLRTY 243

Query: 491  EASGKPFSKSI------------YDGIHRCLTSLGMFDEAEKIVEKMKNDGYEPDNITYS 634
             +    F + +            Y+   R L+      E   ++E+MK  GY+ D   Y 
Sbjct: 244  PSKASSFFRWVGRYPGYEHNSVTYNAAARVLSRDDSIGEFWGMIEEMKGAGYDLDIDNYI 303

Query: 635  QIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHCAANEVEKALVYFAKMTEK 814
            +I   + K++  +++ ++ + M +   KP  +   +L++   A +  + +L +  ++ +K
Sbjct: 304  KISRQFQKSKMMEDSVKLYEFMMDGPFKPSAQDCNLLLRSISAGDNPDCSLAF--RVAKK 361

Query: 815  GFDADADLLDVLIGGFMGQSHTVGAY---XXXXXXXXXXXXXPWQATYKNLIQKLLEERK 985
                   L      G      + G +                P   TY  L+  L + R+
Sbjct: 362  YESTGRTLSKAAYDGIHRSLTSAGRFDEAEKMMKVMRNAGYEPDNITYSQLVFGLCKARR 421

Query: 986  IEEAMKLLRMMKKHNYPP 1039
            +EEA ++L  M+ +   P
Sbjct: 422  LEEARRVLDEMEANGCTP 439


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cucumis sativus]
            gi|449524136|ref|XP_004169079.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  502 bits (1293), Expect = e-139
 Identities = 252/423 (59%), Positives = 308/423 (72%), Gaps = 1/423 (0%)
 Frame = +2

Query: 2    VKEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSL 181
            V++V+D++  S W               SDN ++RV KELR   SPLKA +FF WV    
Sbjct: 195  VQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRN--SPLKALSFFHWVGCRP 252

Query: 182  GFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDC 361
             + HN V+YN + RVL  +++I  FW V+EEMK+A  E+D+DTYIK+SRQ QK+KM+ + 
Sbjct: 253  DYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEA 312

Query: 362  VKLYEHMMDSSYKPSDSECSLILRAIAGS-SVDIDLVNRVFNKYEASGKPFSKSIYDGIH 538
            VKLYE MMD  YKPS  +CS++LR IA S + D+ LV RV  K+EA+G   SK++YDGIH
Sbjct: 313  VKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIH 372

Query: 539  RCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCK 718
            R LTS G FD+AE IV+ M+N GYEPDN+TYSQ+VFG CKARR +EA ++LD ME  GC 
Sbjct: 373  RSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCI 432

Query: 719  PDIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXX 898
            PDIKTWTILI+GHC ANE++ ALV FAKM EK  D DADLLDVLI GF+ Q    GAY  
Sbjct: 433  PDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQL 492

Query: 899  XXXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFG 1078
                       PWQATYK LI+ LLE RK+EEA+ LLR+MKK NYPPFPEPFVQ ISKFG
Sbjct: 493  LIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFG 552

Query: 1079 SVEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLF 1258
            +V+DA +FL  L+ KE+P+VSAY HIF SFFNEGR+SEAKDLLFKCPHH+RKH  +  LF
Sbjct: 553  TVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLF 612

Query: 1259 GSA 1267
            GSA
Sbjct: 613  GSA 615


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  501 bits (1290), Expect = e-139
 Identities = 247/423 (58%), Positives = 310/423 (73%), Gaps = 1/423 (0%)
 Frame = +2

Query: 2    VKEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSL 181
            VK+V++++  S W               SDN +L V +ELRG   PLKA  FF+WV    
Sbjct: 202  VKKVVELVTMSVWSSEVEKKLGELKNSFSDNFVLHVLRELRGY--PLKALRFFQWVGECP 259

Query: 182  GFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDC 361
            G++H+ +TYN + RVL  +++I +FW ++EEMK+ G EMD+DTYIK+SRQ QKNKM+ED 
Sbjct: 260  GYEHSSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLEDA 319

Query: 362  VKLYEHMMDSSYKPSDSECSLILRAIA-GSSVDIDLVNRVFNKYEASGKPFSKSIYDGIH 538
            VKLYE MMD  YKPS  +C+++LR+I+  S+ D+ LV RV  KYEA G    K++YDGIH
Sbjct: 320  VKLYEIMMDGPYKPSVQDCTMLLRSISLSSNPDLALVFRVTEKYEAVGNSLCKAVYDGIH 379

Query: 539  RCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCK 718
            R LTS+G FDEA KI+E M++ G EPDNITYSQ+V+G CKAR+ +EA ++LD ME  GC 
Sbjct: 380  RSLTSVGRFDEAGKIMESMRSAGCEPDNITYSQLVYGLCKARKLEEACKLLDEMEACGCV 439

Query: 719  PDIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXX 898
            PDIKTWTILI+GHCAA EV+KAL+ FAKM EK  DADADLL+VLI GF+ Q    GAY  
Sbjct: 440  PDIKTWTILIQGHCAAKEVDKALICFAKMMEKNCDADADLLEVLINGFLSQKRIDGAYKL 499

Query: 899  XXXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFG 1078
                       PWQATYK +I KLL  RK+EEA+ LL +MKK NYPPFPEPF++ ISKFG
Sbjct: 500  LVEMVNTAHLVPWQATYKLMINKLLGVRKLEEAINLLHLMKKQNYPPFPEPFIEYISKFG 559

Query: 1079 SVEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLF 1258
            +VEDA EFL AL+ K++P+ SAY H+F+SFF EGR SEAKDLL+KCPHH+RKHP I  LF
Sbjct: 560  TVEDAGEFLNALSAKKYPSQSAYVHVFESFFQEGRESEAKDLLYKCPHHIRKHPDICKLF 619

Query: 1259 GSA 1267
            GSA
Sbjct: 620  GSA 622



 Score =  101 bits (252), Expect = 7e-19
 Identities = 91/374 (24%), Positives = 156/374 (41%), Gaps = 37/374 (9%)
 Frame = +2

Query: 11   VIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLGFK 190
            +++++  + W               +   ++ V K+L     P + +NFF WV    GF+
Sbjct: 68   IVELVLENDWSDELESELEKSSSVLTHETVIYVLKKL--DKDPQRTWNFFNWVTEKNGFR 125

Query: 191  HNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCVKL 370
             +   Y+ +LR L   E++ +FW  + +MK  GF +D +TY+ +    +K KM  + V L
Sbjct: 126  PSSAMYSLILRSLVHGESMKQFWVTIRKMKEQGFCIDKETYLTILGVFKKGKMASEEVAL 185

Query: 371  --------YEHMMDSSYKPSDSECSLILRAIAGSSVDIDL--------------VNRVFN 484
                     E+ MD   K       L+  ++  S V+  L              V R   
Sbjct: 186  THFYNRMVQENAMDEVVK---KVVELVTMSVWSSEVEKKLGELKNSFSDNFVLHVLRELR 242

Query: 485  KY------------EASGKPFSKSIYDGIHRCLTSLGMFDEAEKIVEKMKNDGYEPDNIT 628
             Y            E  G   S   Y+ I R L       E   +VE+MK+ G+E D  T
Sbjct: 243  GYPLKALRFFQWVGECPGYEHSSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDT 302

Query: 629  YSQIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHCAANEVEKALVYFAKMT 808
            Y +I   + K +  ++A ++ ++M +   KP ++  T+L++    ++  + ALV+  ++T
Sbjct: 303  YIKISRQFQKNKMLEDAVKLYEIMMDGPYKPSVQDCTMLLRSISLSSNPDLALVF--RVT 360

Query: 809  EKGFDADADLLDVLIGGFMGQSHTVGAY---XXXXXXXXXXXXXPWQATYKNLIQKLLEE 979
            EK       L   +  G      +VG +                P   TY  L+  L + 
Sbjct: 361  EKYEAVGNSLCKAVYDGIHRSLTSVGRFDEAGKIMESMRSAGCEPDNITYSQLVYGLCKA 420

Query: 980  RKIEEAMKLLRMMK 1021
            RK+EEA KLL  M+
Sbjct: 421  RKLEEACKLLDEME 434


>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score =  492 bits (1266), Expect = e-136
 Identities = 247/422 (58%), Positives = 307/422 (72%), Gaps = 1/422 (0%)
 Frame = +2

Query: 2    VKEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSL 181
            VK+V+DV+  + W               S+  ++RV ++LR    PLKA  FF+WVE+  
Sbjct: 201  VKKVMDVVLGAEWSDKVEKELGEIDVELSEKFVVRVLRDLRV--CPLKALRFFRWVEQCA 258

Query: 182  GFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDC 361
            G++HN VTYNGM  VL    +I +FW V+EEMK AG E+DLDTYIK+SRQ QK+KMVED 
Sbjct: 259  GYEHNSVTYNGMSLVLGQASSIGEFWSVIEEMKVAGQELDLDTYIKLSRQFQKSKMVEDA 318

Query: 362  VKLYEHMMDSSYKPSDSECSLILRAI-AGSSVDIDLVNRVFNKYEASGKPFSKSIYDGIH 538
            VKLYE MMD  YKPS  + S++LR+I A    D+DLV RV  K+E++G   SK++YDGIH
Sbjct: 319  VKLYELMMDGPYKPSVQDVSILLRSISANERPDMDLVFRVVKKFESAGFTLSKAVYDGIH 378

Query: 539  RCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCK 718
            R LT+LG FDEAE  +  M+N G+EPDNITYSQ+VFG CKA++ DEA ++LD MEENGC 
Sbjct: 379  RSLTNLGRFDEAEDTLIAMRNAGFEPDNITYSQVVFGLCKAKKLDEACKLLDDMEENGCV 438

Query: 719  PDIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXX 898
            PDIKTW ILI+GHCAANE++KAL+ FAKM EK   ADAD+LDVLI G + Q+   GAY  
Sbjct: 439  PDIKTWMILIQGHCAANEIDKALICFAKMMEKECKADADILDVLINGLIKQAKVDGAYKL 498

Query: 899  XXXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFG 1078
                       PWQAT+KNLIQ LL  RK+EEAM+LL +MKK  YPP+PEPFV  ISKFG
Sbjct: 499  LIEMLNTAHVRPWQATFKNLIQNLLGARKLEEAMELLCLMKKQGYPPYPEPFVGYISKFG 558

Query: 1079 SVEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLF 1258
            SVEDA EF  AL+VKE+P+ +AY H+F+SFF EGRHSEAKDLL+KCPHH+RK   +  LF
Sbjct: 559  SVEDASEFFKALSVKEYPSNAAYVHVFKSFFKEGRHSEAKDLLYKCPHHIRKLGEVRKLF 618

Query: 1259 GS 1264
            G+
Sbjct: 619  GA 620



 Score = 98.6 bits (244), Expect = 6e-18
 Identities = 84/378 (22%), Positives = 163/378 (43%), Gaps = 35/378 (9%)
 Frame = +2

Query: 11   VIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLGFK 190
            V+ ++ S+ W               + ++++ V K+L     P KA++FF WV    GF 
Sbjct: 67   VLQLVLSNQWSPELETELSESHLSLTHDVVIYVLKKLNK--DPAKAWSFFNWVCEKKGFS 124

Query: 191  HNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCVKL 370
                 ++ MLRVL  ++T+ +FW VL  M++ GF +D  TY+ +   L+  KM  D V  
Sbjct: 125  PGHSMFSLMLRVLVHKDTMRQFWGVLTRMRDEGFYIDAQTYLSILELLKTGKMDAD-VSA 183

Query: 371  YEHMMDSSYKPS--DSECSLILRAIAGS-----------SVDIDL----VNRVFNKY--- 490
            ++H  +   + +  D +   ++  + G+            +D++L    V RV       
Sbjct: 184  FKHFYERMIQENAGDEDVKKVMDVVLGAEWSDKVEKELGEIDVELSEKFVVRVLRDLRVC 243

Query: 491  ------------EASGKPFSKSIYDGIHRCLTSLGMFDEAEKIVEKMKNDGYEPDNITYS 634
                        + +G   +   Y+G+   L       E   ++E+MK  G E D  TY 
Sbjct: 244  PLKALRFFRWVEQCAGYEHNSVTYNGMSLVLGQASSIGEFWSVIEEMKVAGQELDLDTYI 303

Query: 635  QIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHCAANEVEKALVYFAKMTEK 814
            ++   + K++  ++A ++ ++M +   KP ++  +IL++   A    +  LV+  ++ +K
Sbjct: 304  KLSRQFQKSKMVEDAVKLYELMMDGPYKPSVQDVSILLRSISANERPDMDLVF--RVVKK 361

Query: 815  GFDADADLLDVLIGGFMGQSHTVGAY---XXXXXXXXXXXXXPWQATYKNLIQKLLEERK 985
               A   L   +  G       +G +                P   TY  ++  L + +K
Sbjct: 362  FESAGFTLSKAVYDGIHRSLTNLGRFDEAEDTLIAMRNAGFEPDNITYSQVVFGLCKAKK 421

Query: 986  IEEAMKLLRMMKKHNYPP 1039
            ++EA KLL  M+++   P
Sbjct: 422  LDEACKLLDDMEENGCVP 439


>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550322390|gb|EEF05766.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 486

 Score =  489 bits (1259), Expect = e-135
 Identities = 241/423 (56%), Positives = 306/423 (72%), Gaps = 1/423 (0%)
 Frame = +2

Query: 2    VKEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSL 181
            VK+V+ +I    W               +DN ++RV KELR    P+KA  FF+WV+R  
Sbjct: 59   VKDVVRIILEREWNKEVEKKLVGMRIVLTDNFVIRVLKELRSY--PVKALRFFQWVDRRE 116

Query: 182  GFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDC 361
            G++HN VTYN ++RVL  +++I +FW V++EMKNAG+EMD+DTYIK+SRQ QK K++ED 
Sbjct: 117  GYQHNTVTYNALVRVLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKLMEDA 176

Query: 362  VKLYEHMMDSSYKPSDSECSLILRAIAGS-SVDIDLVNRVFNKYEASGKPFSKSIYDGIH 538
            V+LYE MMD  +KPS  +C ++LR++A S + D+DLV+RV + Y+A+G   SKS+YDG+H
Sbjct: 177  VRLYEFMMDGPFKPSVQDCYILLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSVYDGMH 236

Query: 539  RCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCK 718
            R  TS G FDEAEKIV+ M++ GYEPDNITYSQ+VFG CK++R +EA ++LD ME  GC 
Sbjct: 237  RSFTSAGKFDEAEKIVKAMRDAGYEPDNITYSQLVFGLCKSKRLEEACKVLDEMEAGGCI 296

Query: 719  PDIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXX 898
            PDIKTWTILI+GH AAN+V+K L+   KMTEK  D DADLLDVL+ GF+ Q    GAY  
Sbjct: 297  PDIKTWTILIQGHFAANQVDKGLLCLVKMTEKNTDPDADLLDVLVKGFLSQRKMDGAYTF 356

Query: 899  XXXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFG 1078
                       PWQATYK LI+KLL+ RK+EEA  LLR+MKKHNYPPFPEPF Q ISKFG
Sbjct: 357  LVEMVNKLRLVPWQATYKLLIEKLLQVRKLEEATDLLRLMKKHNYPPFPEPFDQYISKFG 416

Query: 1079 SVEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLF 1258
            +VEDA  F   L+VKE+P+  AY  +  SF  EGR SEA+DLLFKCPHH+RK   IS LF
Sbjct: 417  TVEDAVNFFKVLSVKEYPSSVAYLRMLDSFLREGRDSEARDLLFKCPHHIRKDHKISKLF 476

Query: 1259 GSA 1267
            GSA
Sbjct: 477  GSA 479


>ref|XP_007155484.1| hypothetical protein PHAVU_003G205300g [Phaseolus vulgaris]
            gi|561028838|gb|ESW27478.1| hypothetical protein
            PHAVU_003G205300g [Phaseolus vulgaris]
          Length = 631

 Score =  481 bits (1239), Expect = e-133
 Identities = 239/423 (56%), Positives = 299/423 (70%), Gaps = 1/423 (0%)
 Frame = +2

Query: 2    VKEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSL 181
            V +V+ +I  S WG              SDN ++RV K+LR   +PLK+Y FF WV    
Sbjct: 199  VTKVVGIISVSEWGEEVMGELAKLKIQLSDNFVIRVLKDLRN--TPLKSYKFFHWVGTQP 256

Query: 182  GFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDC 361
            G++HN VTYN +  VL   ++I +FW V+EE+K+ G E+D+DTYIK+SRQLQKN+M+ED 
Sbjct: 257  GYEHNTVTYNAVASVLARNDSIQEFWSVIEELKSVGHELDIDTYIKISRQLQKNRMMEDA 316

Query: 362  VKLYEHMMDSSYKPSDSECSLILRAIAGSSV-DIDLVNRVFNKYEASGKPFSKSIYDGIH 538
            VKLYEHMMD SYKP   +CSL+L++I+ S   ++DLV RV  KYE++G   SK+IYDGIH
Sbjct: 317  VKLYEHMMDGSYKPLVQDCSLLLKSISASDKPNLDLVFRVARKYESTGHTLSKAIYDGIH 376

Query: 539  RCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCK 718
            R LT  G FDEAE IV  M+N G++PDNITYSQ+V+G CK RRF+EA ++L+ ME  GC 
Sbjct: 377  RSLTGAGKFDEAENIVRTMRNAGHKPDNITYSQVVYGLCKMRRFEEACKVLEEMESCGCI 436

Query: 719  PDIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXX 898
            PDIKTWTILI+GHC ANE+EKAL+ F+KM EK  + DADLLDVL+ GF  Q    GAY  
Sbjct: 437  PDIKTWTILIQGHCDANELEKALLCFSKMIEKDCNPDADLLDVLVDGFFSQKRIQGAYEV 496

Query: 899  XXXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFG 1078
                       PWQATYK LI+KLLE  K EEA++LLR+MK HNYPP+  PFV  ISKFG
Sbjct: 497  FIEISRKCRISPWQATYKKLIEKLLEVTKFEEALELLRLMKTHNYPPYHLPFVPYISKFG 556

Query: 1079 SVEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLF 1258
            SVEDA  FL AL+ K +P+   Y  +F+S F EGR SEAKDLL+K PHH+R H  IS LF
Sbjct: 557  SVEDAEAFLKALSAKSYPSHVVYVQVFESLFQEGRLSEAKDLLYKTPHHIRTHSKISKLF 616

Query: 1259 GSA 1267
            GS+
Sbjct: 617  GSS 619



 Score = 80.5 bits (197), Expect = 2e-12
 Identities = 76/371 (20%), Positives = 151/371 (40%), Gaps = 34/371 (9%)
 Frame = +2

Query: 11   VIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLGFK 190
            +++++ ++ W               S   ++ V K L    +P KA  FF WV +   F+
Sbjct: 65   IVELVSTNDWSQALELNLENSCPSMSHETVIYVIKRL--DKNPEKASCFFNWVIKKDWFR 122

Query: 191  HNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCVKL 370
             +   ++ ++R+L  ++T+ +FW  L  MK+ GF ++ +TY+ +  + ++ KM  D V L
Sbjct: 123  PSSSVFSLIIRILATKDTMKQFWITLRMMKDQGFYLNEETYLTIYVRFKREKMNSDSVAL 182

Query: 371  ---YEHMMDSSYKPS-----------DSECSLILRAIAGSSVDI----------DLVNRV 478
               Y  M++ +   S                 ++  +A   + +          DL N  
Sbjct: 183  THFYNRMLEENAMQSVVTKVVGIISVSEWGEEVMGELAKLKIQLSDNFVIRVLKDLRNTP 242

Query: 479  FNKYE-------ASGKPFSKSIYDGIHRCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQ 637
               Y+         G   +   Y+ +   L       E   ++E++K+ G+E D  TY +
Sbjct: 243  LKSYKFFHWVGTQPGYEHNTVTYNAVASVLARNDSIQEFWSVIEELKSVGHELDIDTYIK 302

Query: 638  IVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHCAANEVEKALVYFAKMTEKG 817
            I     K R  ++A ++ + M +   KP ++  ++L+K   A+++    LV+  ++  K 
Sbjct: 303  ISRQLQKNRMMEDAVKLYEHMMDGSYKPLVQDCSLLLKSISASDKPNLDLVF--RVARKY 360

Query: 818  FDADADLLDVLIGGFMGQSHTVGAY---XXXXXXXXXXXXXPWQATYKNLIQKLLEERKI 988
                  L   +  G        G +                P   TY  ++  L + R+ 
Sbjct: 361  ESTGHTLSKAIYDGIHRSLTGAGKFDEAENIVRTMRNAGHKPDNITYSQVVYGLCKMRRF 420

Query: 989  EEAMKLLRMMK 1021
            EEA K+L  M+
Sbjct: 421  EEACKVLEEME 431


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Glycine max]
          Length = 635

 Score =  480 bits (1235), Expect = e-133
 Identities = 242/423 (57%), Positives = 298/423 (70%), Gaps = 1/423 (0%)
 Frame = +2

Query: 2    VKEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSL 181
            V  V+ +I  S WG              SDN ++RV KELR   +PLKAY FF WV +  
Sbjct: 201  VSNVVGIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRK--TPLKAYKFFHWVGKQS 258

Query: 182  GFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDC 361
            G++H+ VTYN + RVL   E+I +FW V+EEMK  G E+D+DTYIK++RQLQ+N+M+ED 
Sbjct: 259  GYEHDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKITRQLQRNRMMEDA 318

Query: 362  VKLYEHMMDSSYKPSDSECSLILRAI-AGSSVDIDLVNRVFNKYEASGKPFSKSIYDGIH 538
            VKLYE MMD S KP   +C+++L++I A    ++DLV RV  KYE++G   SK+IYDGIH
Sbjct: 319  VKLYELMMDGSCKPLVQDCNMLLKSISANDKPNLDLVFRVAKKYESTGHTLSKAIYDGIH 378

Query: 539  RCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCK 718
            R LTS G FDEAE IV  M+N GYEPDNITYSQ+VFG CK RRF+EA ++L+ ME + C 
Sbjct: 379  RSLTSAGNFDEAENIVRTMRNAGYEPDNITYSQMVFGLCKMRRFEEACKVLEDMESSRCI 438

Query: 719  PDIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXX 898
            PDIKTWTILI+GHC+ANEV+KAL+ FAKM EKG D DADLLDVL  GF+ Q    GAY  
Sbjct: 439  PDIKTWTILIQGHCSANEVDKALLCFAKMIEKGCDPDADLLDVLADGFLSQKRIEGAYEL 498

Query: 899  XXXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFG 1078
                       PWQATYK LI+KLL   K EEA++LLR+MK HNYPP+  PFV  ISKFG
Sbjct: 499  VAEISRKCRISPWQATYKKLIEKLLGVMKFEEALELLRLMKSHNYPPYHLPFVPYISKFG 558

Query: 1079 SVEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLF 1258
            SVEDA  FL AL+VK +P+   Y  +F+S F EGR SEAKDLL+K PHH+R H  I  LF
Sbjct: 559  SVEDAEAFLKALSVKSYPSHIVYVQVFESLFREGRLSEAKDLLYKTPHHIRTHSKICKLF 618

Query: 1259 GSA 1267
            GS+
Sbjct: 619  GSS 621



 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 86/377 (22%), Positives = 157/377 (41%), Gaps = 34/377 (9%)
 Frame = +2

Query: 11   VIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLGFK 190
            +++++ ++ W                   +L V K L    +P KA  FF WV + + F+
Sbjct: 67   IVELLLTNDWSQALELKLENRFPSMPHETVLYVIKRL--DKNPEKASCFFNWVCKKVWFR 124

Query: 191  HNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCVKL 370
             +   Y+ ++R+L  ++T+ +FW  L  MK  GF +D +TY+ +S   ++ KM  D V L
Sbjct: 125  PSCSVYSLIVRILAAKDTMKQFWVTLRMMKENGFFLDEETYLTISVGFKREKMDSDSVAL 184

Query: 371  ---YEHMMDSSYKPS--DSECSLILRAIAGSSVDIDL-----------VNRVFNKY---- 490
               Y  M++ +   S   +   +I R+  G  V  +L           V RV  +     
Sbjct: 185  THFYNRMLEENAMQSVVSNVVGIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKTP 244

Query: 491  -----------EASGKPFSKSIYDGIHRCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQ 637
                       + SG       Y+ + R L      +E   ++E+MK  G+E D  TY +
Sbjct: 245  LKAYKFFHWVGKQSGYEHDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIK 304

Query: 638  IVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHCAANEVEKALVYFAKMTEKG 817
            I     + R  ++A ++ ++M +  CKP ++   +L+K   A ++    LV+  ++ +K 
Sbjct: 305  ITRQLQRNRMMEDAVKLYELMMDGSCKPLVQDCNMLLKSISANDKPNLDLVF--RVAKKY 362

Query: 818  FDADADLLDVLIGGFMGQSHTVGAY---XXXXXXXXXXXXXPWQATYKNLIQKLLEERKI 988
                  L   +  G      + G +                P   TY  ++  L + R+ 
Sbjct: 363  ESTGHTLSKAIYDGIHRSLTSAGNFDEAENIVRTMRNAGYEPDNITYSQMVFGLCKMRRF 422

Query: 989  EEAMKLLRMMKKHNYPP 1039
            EEA K+L  M+     P
Sbjct: 423  EEACKVLEDMESSRCIP 439


>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
            gi|565465717|ref|XP_006290750.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
            gi|482559456|gb|EOA23647.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
            gi|482559457|gb|EOA23648.1| hypothetical protein
            CARUB_v10016848mg [Capsella rubella]
          Length = 618

 Score =  458 bits (1178), Expect = e-126
 Identities = 225/396 (56%), Positives = 292/396 (73%), Gaps = 2/396 (0%)
 Frame = +2

Query: 86   SDNLMLRVFKELRGKGSPLKAYNFFKWVE-RSLGFKHNGVTYNGMLRVLCWEETISKFWE 262
            SDN ++RV KELR    PLKA  FF WV   S G++H+ VTYN  LRVL    ++++FW 
Sbjct: 224  SDNFVIRVLKELRDH--PLKALAFFNWVGGSSSGYQHSTVTYNAALRVLTRPNSVAEFWN 281

Query: 263  VLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCVKLYEHMMDSSYKPSDSECSLILRAI- 439
            V++EMK AG+EMDLDTYI+VSRQ QK++M+ + VKLYE+MMD  +KP   +CS +LR++ 
Sbjct: 282  VVDEMKIAGYEMDLDTYIRVSRQFQKSRMMTEAVKLYEYMMDGPFKPLVHDCSTLLRSLS 341

Query: 440  AGSSVDIDLVNRVFNKYEASGKPFSKSIYDGIHRCLTSLGMFDEAEKIVEKMKNDGYEPD 619
            AG + D+DLV RV  K+E+SG   SK++YDGIHR LTS+G FDEAE+I++ M+N  YEPD
Sbjct: 342  AGPNPDLDLVFRVSRKFESSGNSLSKAVYDGIHRSLTSVGRFDEAEEIIKAMRNASYEPD 401

Query: 620  NITYSQIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHCAANEVEKALVYFA 799
            NITYSQ+VFG CKA+R +EA  +LD ME  GC PDIKTWTILI+GHC  NE++KA   FA
Sbjct: 402  NITYSQLVFGLCKAKRLEEARGVLDQMEAQGCSPDIKTWTILIQGHCKNNELDKAFACFA 461

Query: 800  KMTEKGFDADADLLDVLIGGFMGQSHTVGAYXXXXXXXXXXXXXPWQATYKNLIQKLLEE 979
             M EKGFD D+DLL+VLIGGF+ Q+   GAY             PWQ+TYK LI KLLE 
Sbjct: 462  NMLEKGFDVDSDLLEVLIGGFLSQNRIEGAYKFLMEMVRNANVRPWQSTYKILIDKLLEI 521

Query: 980  RKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFGSVEDAWEFLTALTVKEHPTVSAYQHIF 1159
            +K EEA+ LL+MMKK NYP + EPF   ++KFG++EDA +FL  L+ K+ PT +AY H+ 
Sbjct: 522  KKGEEALDLLQMMKKQNYPAYAEPFDGYLAKFGTLEDAKKFLDVLSSKDSPTFAAYFHVI 581

Query: 1160 QSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLFGSA 1267
            ++F+ EGR ++AK+LLF CPHH + HP IS LFG+A
Sbjct: 582  EAFYREGRLTDAKNLLFICPHHFKTHPKISELFGAA 617



 Score = 97.1 bits (240), Expect = 2e-17
 Identities = 85/343 (24%), Positives = 144/343 (41%), Gaps = 41/343 (11%)
 Frame = +2

Query: 134  SPLKAYNFFKWVERSLGFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTY 313
            +P KAY F  WV R  G   +   Y+ MLR+L  + ++ +FW++L EMK  GF +D DTY
Sbjct: 101  NPDKAYCFIDWVLRDSGLSPSTPLYSIMLRILAQQRSMKRFWKILSEMKQGGFYLDDDTY 160

Query: 314  IKVSRQLQKNKMVEDCVKL---YEHMMDSSYKPSDSECSLILRAIAGSSVDID------- 463
              V  +L+K++   D V +   YE M+       D+E  ++ R ++ + + +D       
Sbjct: 161  TTVYGELKKSESKADAVAVAHFYERML------KDNEMYVVARNVSAAVLKVDWSCEVEK 214

Query: 464  ------------LVNRVFNKY----------------EASGKPFSKSIYDGIHRCLTSLG 559
                         V RV  +                  +SG   S   Y+   R LT   
Sbjct: 215  ELQEMKLVLSDNFVIRVLKELRDHPLKALAFFNWVGGSSSGYQHSTVTYNAALRVLTRPN 274

Query: 560  MFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWT 739
               E   +V++MK  GYE D  TY ++   + K+R   EA ++ + M +   KP +   +
Sbjct: 275  SVAEFWNVVDEMKIAGYEMDLDTYIRVSRQFQKSRMMTEAVKLYEYMMDGPFKPLVHDCS 334

Query: 740  ILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAY---XXXXXX 910
             L++   A    +  LV+  +++ K   +   L   +  G      +VG +         
Sbjct: 335  TLLRSLSAGPNPDLDLVF--RVSRKFESSGNSLSKAVYDGIHRSLTSVGRFDEAEEIIKA 392

Query: 911  XXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPP 1039
                   P   TY  L+  L + +++EEA  +L  M+     P
Sbjct: 393  MRNASYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCSP 435


>ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
            chloroplastic-like [Cicer arietinum]
          Length = 641

 Score =  451 bits (1161), Expect = e-124
 Identities = 232/424 (54%), Positives = 294/424 (69%), Gaps = 2/424 (0%)
 Frame = +2

Query: 2    VKEVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSL 181
            V  V+ ++  S W               SDN ++RV KELR    PLKAY FF+WV +  
Sbjct: 203  VTNVVGIVSGSEWDDKVENKLSELKIKLSDNFVIRVLKELRN--CPLKAYKFFQWVGKQS 260

Query: 182  GFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDC 361
             ++ N VTYN + RVL   ++I +FW +LEEMK+ G ++DLDTYIK+SRQLQKN+M+ED 
Sbjct: 261  SYQLNTVTYNAVARVLAKMDSIEEFWSILEEMKSVGHQLDLDTYIKISRQLQKNRMMEDA 320

Query: 362  VKLYEHMMDSSYKPSDSECSLILRAIAGSSV-DIDLVNRVFNKYEASGKPFSKSIYDGIH 538
            VKLYE MMDS YKP+  +C ++LR I+ S   +IDLV RV  K+E++G   SK +YD IH
Sbjct: 321  VKLYELMMDSLYKPTVVDCVVLLRTISASDKPNIDLVFRVAKKFESTGYTISKVVYDSIH 380

Query: 539  RCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCK 718
            R LTS G FDEAEK+V+ MKN GYE DNITYSQ +FG CK RRF+EA ++LD M+   C 
Sbjct: 381  RSLTSAGKFDEAEKMVQTMKNAGYELDNITYSQTIFGLCKFRRFEEANKVLDEMQSCNCY 440

Query: 719  PDIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAY-X 895
             D +TWTILIKG+C A +++ AL+YFAKMTE+  +ADADLLDVL+ GF+ Q+   GAY  
Sbjct: 441  ADKETWTILIKGYCDAGQLDNALLYFAKMTEQQCEADADLLDVLVNGFLAQNRIDGAYKV 500

Query: 896  XXXXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKF 1075
                        P QATYK LI +LL  RK EEA++LLRMMK   YPP+ EPFV  ISKF
Sbjct: 501  LLELTTSAYRLTPRQATYKKLIDRLLGVRKFEEALELLRMMKAQKYPPYHEPFVPHISKF 560

Query: 1076 GSVEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSL 1255
            G+VEDA EFL  L++K +P+ + Y  IF+S F EGR SEAKDLL+KCP H+RKH  IS L
Sbjct: 561  GTVEDAAEFLKVLSIKSYPSYTVYLKIFKSLFEEGRLSEAKDLLYKCPPHIRKHSQISEL 620

Query: 1256 FGSA 1267
            FGS+
Sbjct: 621  FGSS 624



 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 92/411 (22%), Positives = 179/411 (43%), Gaps = 39/411 (9%)
 Frame = +2

Query: 11   VIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVERSLGFK 190
            +++++ S+ W               +   ++ V K L    +P KA++FF WV +   F 
Sbjct: 69   ILELVYSNDWSQDLEHELENCRSSLTHETVVYVLKRL--DKNPEKAFSFFNWVSKKEWFM 126

Query: 191  HNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCVKL 370
             +   Y+ ++RVL  +ET+ +FW  L  MK  GF +D +TY+ +S   +K KM  D V L
Sbjct: 127  ASSSVYSLIIRVLANQETMKQFWITLRTMKEKGFYLDEETYLTISVGFKKQKMNSDVVAL 186

Query: 371  YEHMMDSSYKPS--DSECSLILRAIAGSSVDIDLVNRV---------------------- 478
              H  D   K +   S  + ++  ++GS  D  + N++                      
Sbjct: 187  -SHFYDGMIKQNAMQSVVTNVVGIVSGSEWDDKVENKLSELKIKLSDNFVIRVLKELRNC 245

Query: 479  ----FNKYEASGKPFSKSI----YDGIHRCLTSLGMFDEAEKIVEKMKNDGYEPDNITYS 634
                +  ++  GK  S  +    Y+ + R L  +   +E   I+E+MK+ G++ D  TY 
Sbjct: 246  PLKAYKFFQWVGKQSSYQLNTVTYNAVARVLAKMDSIEEFWSILEEMKSVGHQLDLDTYI 305

Query: 635  QIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHCAANEVEKALVYFAKMTEK 814
            +I     K R  ++A ++ ++M ++  KP +    +L++   A+++    LV+      K
Sbjct: 306  KISRQLQKNRMMEDAVKLYELMMDSLYKPTVVDCVVLLRTISASDKPNIDLVF---RVAK 362

Query: 815  GFDADADLLDVLIGGFMGQSHT-VGAYXXXXXXXXXXXXXPWQ---ATYKNLIQKLLEER 982
             F++    +  ++   + +S T  G +              ++    TY   I  L + R
Sbjct: 363  KFESTGYTISKVVYDSIHRSLTSAGKFDEAEKMVQTMKNAGYELDNITYSQTIFGLCKFR 422

Query: 983  KIEEAMKLLRMMKKHNYPPFPEPFVQCISKF---GSVEDAWEFLTALTVKE 1126
            + EEA K+L  M+  N     E +   I  +   G +++A  +   +T ++
Sbjct: 423  RFEEANKVLDEMQSCNCYADKETWTILIKGYCDAGQLDNALLYFAKMTEQQ 473


>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g48250, chloroplastic; Flags: Precursor
            gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
            thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  451 bits (1161), Expect = e-124
 Identities = 228/424 (53%), Positives = 297/424 (70%), Gaps = 4/424 (0%)
 Frame = +2

Query: 8    EVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVE---RS 178
            EV  V+    W               SDN ++RV KELR    PLKA  FF WV     S
Sbjct: 199  EVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREH--PLKALAFFHWVGGGGSS 256

Query: 179  LGFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVED 358
             G++H+ VTYN  LRVL    ++++FW V++EMK AG++MDLDTYIKVSRQ QK++M+ +
Sbjct: 257  SGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAE 316

Query: 359  CVKLYEHMMDSSYKPSDSECSLILRAIAGS-SVDIDLVNRVFNKYEASGKPFSKSIYDGI 535
             VKLYE+MMD  +KPS  +CSL+LR ++GS + D+DLV RV  KYE++GK  SK++YDGI
Sbjct: 317  TVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGI 376

Query: 536  HRCLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGC 715
            HR LTS+G FDEAE+I + M+N GYEPDNITYSQ+VFG CKA+R +EA  +LD ME  GC
Sbjct: 377  HRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGC 436

Query: 716  KPDIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYX 895
             PDIKTWTILI+GHC  NE++KAL  FA M EKGFD D++LLDVLI GF+  +   GA  
Sbjct: 437  FPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASI 496

Query: 896  XXXXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKF 1075
                        PWQ+TYK LI KLL+ +K EEA+ LL+MMKK NYP + E F   ++KF
Sbjct: 497  FLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKF 556

Query: 1076 GSVEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSL 1255
            G++EDA +FL  L+ K+ P+ +AY H+ ++F+ EGR ++AK+LLF CPHH + HP IS L
Sbjct: 557  GTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLLFICPHHFKTHPKISEL 616

Query: 1256 FGSA 1267
            FG+A
Sbjct: 617  FGAA 620



 Score = 85.1 bits (209), Expect = 7e-14
 Identities = 79/332 (23%), Positives = 135/332 (40%), Gaps = 37/332 (11%)
 Frame = +2

Query: 137  PLKAYNFFKWVERSLGFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYI 316
            P KAY F  WV R  G   +   Y+ MLR+L  + ++ +FW  L EMK  GF +D DTY 
Sbjct: 103  PEKAYYFLDWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYK 162

Query: 317  KVSRQLQKNKMVEDCVKL---YEHMMDSSYKP--SDSECSLILRAIAGSSVDIDL----- 466
             +  +L K K   D V +   YE M+  +     +    +++ +      V+ +L     
Sbjct: 163  TIYGELSKEKSKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKL 222

Query: 467  ------VNRVFNKY------------------EASGKPFSKSIYDGIHRCLTSLGMFDEA 574
                  V RV  +                    +SG   S   Y+   R L       E 
Sbjct: 223  VLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEF 282

Query: 575  EKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKG 754
              +V++MK  GY+ D  TY ++   + K+R   E  ++ + M +   KP I+  ++L++ 
Sbjct: 283  WSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRY 342

Query: 755  HCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAY---XXXXXXXXXXX 925
               +   +  LV+  +++ K       L   +  G      +VG +              
Sbjct: 343  LSGSPNPDLDLVF--RVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAG 400

Query: 926  XXPWQATYKNLIQKLLEERKIEEAMKLLRMMK 1021
              P   TY  L+  L + +++EEA  +L  M+
Sbjct: 401  YEPDNITYSQLVFGLCKAKRLEEARGVLDQME 432


>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297323443|gb|EFH53864.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 618

 Score =  448 bits (1152), Expect = e-123
 Identities = 226/422 (53%), Positives = 295/422 (69%), Gaps = 2/422 (0%)
 Frame = +2

Query: 8    EVIDVIKSSGWGXXXXXXXXXXXXXASDNLMLRVFKELRGKGSPLKAYNFFKWVE-RSLG 184
            +V  V+    W               SDN ++RV KELR    PLKA  FF WV   S G
Sbjct: 198  DVSAVVTKVDWSCEVERELQEMNLVLSDNFVIRVLKELREH--PLKALAFFHWVGGSSSG 255

Query: 185  FKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCV 364
            ++H+ VTYN  LRVL    ++++FW V++EMK AG EMDLDTYIKVSRQ QK++M+ + V
Sbjct: 256  YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGHEMDLDTYIKVSRQFQKSRMITETV 315

Query: 365  KLYEHMMDSSYKPSDSECSLILRAI-AGSSVDIDLVNRVFNKYEASGKPFSKSIYDGIHR 541
            KLYE+MMD  +KPS  +CSL+LR + A  + D+DLV RV  KYE++GK  SK++YDGIHR
Sbjct: 316  KLYEYMMDGPFKPSIQDCSLLLRYLSARPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHR 375

Query: 542  CLTSLGMFDEAEKIVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCKP 721
             LTS+G FDEAE+I + M+N GYEPDNITYSQ+VFG CKA+R +EA  +LD ME  GC P
Sbjct: 376  SLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFP 435

Query: 722  DIKTWTILIKGHCAANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAYXXX 901
            DIKTWTILI+GHC  NE+++AL  FA M EKGFD D++LLDVLI GF+ Q+   GA    
Sbjct: 436  DIKTWTILIQGHCKNNELDRALACFANMLEKGFDIDSNLLDVLIDGFLIQNRIEGASIFL 495

Query: 902  XXXXXXXXXXPWQATYKNLIQKLLEERKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFGS 1081
                      PWQ+TYK LI KLLE +K +EA+ LL++MKK NYP + E F   ++KFG+
Sbjct: 496  MEMVKNANVKPWQSTYKRLIDKLLEIKKGKEALDLLQLMKKQNYPAYAEAFDGYLAKFGT 555

Query: 1082 VEDAWEFLTALTVKEHPTVSAYQHIFQSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLFG 1261
            +EDA +FL  L+ K+ P+ +AY H+ ++F+ EGR ++AK+LLF CPHH + HP IS LFG
Sbjct: 556  LEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLLFICPHHFKTHPKISELFG 615

Query: 1262 SA 1267
            +A
Sbjct: 616  AA 617



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 80/330 (24%), Positives = 136/330 (41%), Gaps = 35/330 (10%)
 Frame = +2

Query: 137  PLKAYNFFKWVERSLGFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYI 316
            P KAY F  WV R  G   +   Y+ MLR+L  + ++ +FW  L EMK  GF +D DTY 
Sbjct: 102  PEKAYYFLDWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLSEMKQGGFYLDEDTYK 161

Query: 317  KVSRQLQKNKMVEDCVKL---YEHMM-DSSYKPSDSECSLILRAIAGSS----------- 451
             +  +L K K   D V +   YE M+ +++      + S ++  +  S            
Sbjct: 162  TIYGELNKEKSKADAVAVAHFYERMLKENAMSVVAGDVSAVVTKVDWSCEVERELQEMNL 221

Query: 452  -VDIDLVNRVFNKY----------------EASGKPFSKSIYDGIHRCLTSLGMFDEAEK 580
             +  + V RV  +                  +SG   S   Y+   R L       E   
Sbjct: 222  VLSDNFVIRVLKELREHPLKALAFFHWVGGSSSGYQHSTVTYNAALRVLARPNSVAEFWS 281

Query: 581  IVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHC 760
            +V++MK  G+E D  TY ++   + K+R   E  ++ + M +   KP I+  ++L++   
Sbjct: 282  VVDEMKTAGHEMDLDTYIKVSRQFQKSRMITETVKLYEYMMDGPFKPSIQDCSLLLRYLS 341

Query: 761  AANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAY---XXXXXXXXXXXXX 931
            A    +  LV+  +++ K       L   +  G      +VG +                
Sbjct: 342  ARPNPDLDLVF--RVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYE 399

Query: 932  PWQATYKNLIQKLLEERKIEEAMKLLRMMK 1021
            P   TY  L+  L + +++EEA  +L  M+
Sbjct: 400  PDNITYSQLVFGLCKAKRLEEARGVLDQME 429


>ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutrema salsugineum]
            gi|557105401|gb|ESQ45735.1| hypothetical protein
            EUTSA_v10010209mg [Eutrema salsugineum]
          Length = 617

 Score =  439 bits (1129), Expect = e-120
 Identities = 220/396 (55%), Positives = 285/396 (71%), Gaps = 2/396 (0%)
 Frame = +2

Query: 86   SDNLMLRVFKELRGKGSPLKAYNFFKWVE-RSLGFKHNGVTYNGMLRVLCWEETISKFWE 262
            SDN ++RV KELR    PLKA  FF WV   S G+KH+ +TYN  LRVL    ++++FW 
Sbjct: 224  SDNFVIRVLKELRDH--PLKALAFFHWVGGSSSGYKHSTITYNAALRVLARPNSVAEFWS 281

Query: 263  VLEEMKNAGFEMDLDTYIKVSRQLQKNKMVEDCVKLYEHMMDSSYKPSDSECSLILRAI- 439
            V++EMK AG E+DLDTYIKV RQ QK++M+ + VKLYE MMD  +KPS  +CSL+LR++ 
Sbjct: 282  VVDEMKVAGHEVDLDTYIKVLRQFQKSRMMIEAVKLYELMMDGPFKPSAQDCSLLLRSLS 341

Query: 440  AGSSVDIDLVNRVFNKYEASGKPFSKSIYDGIHRCLTSLGMFDEAEKIVEKMKNDGYEPD 619
            AG   D+DLV RV  KYE++GK  SK++YDGIHR LTS+G FDEAE+I++ M++ GYEPD
Sbjct: 342  AGHKPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEIIKAMRDSGYEPD 401

Query: 620  NITYSQIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHCAANEVEKALVYFA 799
            NITYSQ+VFG CKA+R +EA  +L+ ME  GC PDIKTWTILI+GHC  +EV++A   F 
Sbjct: 402  NITYSQLVFGLCKAKRLEEARGVLEQMEAQGCFPDIKTWTILIQGHCKNSEVDQAFACFG 461

Query: 800  KMTEKGFDADADLLDVLIGGFMGQSHTVGAYXXXXXXXXXXXXXPWQATYKNLIQKLLEE 979
             M EKGFD D+DLL VL+ GF+ Q+   GA              PWQ TYK LI KLLE 
Sbjct: 462  NMLEKGFDIDSDLLAVLVNGFLSQNRIEGACKFLMEMVRNANVKPWQNTYKALIDKLLEI 521

Query: 980  RKIEEAMKLLRMMKKHNYPPFPEPFVQCISKFGSVEDAWEFLTALTVKEHPTVSAYQHIF 1159
            +K EEA+ LL+MMKK NYP + EPF   ++KFGSVEDA +FL  L+ K+ P+ +A   + 
Sbjct: 522  KKGEEALDLLQMMKKQNYPVYAEPFDGYLAKFGSVEDAKKFLDVLSSKDFPSFAAIFRVI 581

Query: 1160 QSFFNEGRHSEAKDLLFKCPHHVRKHPAISSLFGSA 1267
            +SF+ EGR ++AK+L+F CPHH R HP I+ LFG+A
Sbjct: 582  ESFYREGRLADAKNLVFICPHHFRTHPKITELFGAA 617



 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 80/330 (24%), Positives = 139/330 (42%), Gaps = 35/330 (10%)
 Frame = +2

Query: 137  PLKAYNFFKWVERSLGFKHNGVTYNGMLRVLCWEETISKFWEVLEEMKNAGFEMDLDTYI 316
            P KAY+F  WV R  G   +   Y+ MLR+L  + ++ +FW  L +MK  GF MD +TY 
Sbjct: 102  PDKAYSFLDWVIRESGLSPSSPLYSTMLRILVQQRSMKRFWMTLSDMKRGGFYMDEETYQ 161

Query: 317  KVSRQLQKNKMVEDCVKL---YEHMM-DSSYKPSDSECSLILRAIAGS------------ 448
             V   L K     D V L   YE M+ +++        S ++  +  S            
Sbjct: 162  TVYSLLDKENSKADAVALAHFYERMLKENAMSVVAGNVSALVSKVDWSYEVESKLQDMKL 221

Query: 449  SVDIDLVNRVFNKY----------------EASGKPFSKSIYDGIHRCLTSLGMFDEAEK 580
            ++  + V RV  +                  +SG   S   Y+   R L       E   
Sbjct: 222  ALSDNFVIRVLKELRDHPLKALAFFHWVGGSSSGYKHSTITYNAALRVLARPNSVAEFWS 281

Query: 581  IVEKMKNDGYEPDNITYSQIVFGYCKARRFDEAAEILDMMEENGCKPDIKTWTILIKGHC 760
            +V++MK  G+E D  TY +++  + K+R   EA ++ ++M +   KP  +  ++L++   
Sbjct: 282  VVDEMKVAGHEVDLDTYIKVLRQFQKSRMMIEAVKLYELMMDGPFKPSAQDCSLLLRSLS 341

Query: 761  AANEVEKALVYFAKMTEKGFDADADLLDVLIGGFMGQSHTVGAY---XXXXXXXXXXXXX 931
            A ++ +  LV+  +++ K       L   +  G      +VG +                
Sbjct: 342  AGHKPDLDLVF--RVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEIIKAMRDSGYE 399

Query: 932  PWQATYKNLIQKLLEERKIEEAMKLLRMMK 1021
            P   TY  L+  L + +++EEA  +L  M+
Sbjct: 400  PDNITYSQLVFGLCKAKRLEEARGVLEQME 429