BLASTX nr result
ID: Mentha24_contig00019212
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00019212
(351 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU41877.1| hypothetical protein MIMGU_mgv1a001645mg [Mimulus... 91 2e-16
ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 65 7e-09
ref|XP_006373980.1| hypothetical protein POPTR_0016s12200g [Popu... 64 2e-08
ref|XP_006373979.1| hypothetical protein POPTR_0016s12200g [Popu... 64 2e-08
gb|EXC23668.1| hypothetical protein L484_015578 [Morus notabilis] 60 4e-07
ref|XP_002528114.1| double-stranded RNA binding protein, putativ... 57 2e-06
ref|XP_006366356.1| PREDICTED: RNA polymerase II C-terminal doma... 55 8e-06
>gb|EYU41877.1| hypothetical protein MIMGU_mgv1a001645mg [Mimulus guttatus]
Length = 779
Score = 90.5 bits (223), Expect = 2e-16
Identities = 55/100 (55%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
Frame = +2
Query: 2 PSLLGDPFRRDGRYLASTEPPILSRLXXXXXXXXXXXXXKGGWIVEDDTSRGNLSNRTPG 181
PSLLGDPFRRD RY S EPP+LSRL +GGW+ E+DT+RGN +R PG
Sbjct: 514 PSLLGDPFRRDSRYPRSNEPPLLSRL----PWQAPVLQPQGGWL-EEDTNRGNFRSRAPG 568
Query: 182 IGPEF-----QRSLQNSLSRGTPTTVPVELSHINQVKTEE 286
I EF QR QNSL GT ++VP ELS QVKTEE
Sbjct: 569 IISEFDPSDRQRLHQNSLGHGTSSSVPAELS---QVKTEE 605
>ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 2-like [Vitis vinifera]
Length = 789
Score = 65.5 bits (158), Expect = 7e-09
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Frame = +2
Query: 2 PSLLGDPFRRDGRYLASTEPPILSRLXXXXXXXXXXXXXKGGWIVEDDTSRGNLSNRTPG 181
PSLLG P +RD R + +PPILSRL +G W+VEDD++RG+L+NR G
Sbjct: 471 PSLLGAPIKRDLRNQSLGDPPILSRLPQISTSSLHP---QGVWLVEDDSNRGHLNNRASG 527
Query: 182 -------IGPEFQRSLQNSLSRGTPTTVPVE-LSHINQVKTEE 286
+ P+ QR Q TP + PV L H+ Q+K +E
Sbjct: 528 LVQEADVLKPDKQRGHQIPFGHNTPGSTPVSLLPHLPQLKNDE 570
>ref|XP_006373980.1| hypothetical protein POPTR_0016s12200g [Populus trichocarpa]
gi|550321331|gb|ERP51777.1| hypothetical protein
POPTR_0016s12200g [Populus trichocarpa]
Length = 830
Score = 64.3 bits (155), Expect = 2e-08
Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Frame = +2
Query: 2 PSLLGDPFRRDGRYLASTEPPILSRLXXXXXXXXXXXXXKGGWIVEDDTSRGNLSNRTPG 181
PSLLG P RRD R S +PP+LSR+ +GGW+VE+DTSR +NR
Sbjct: 508 PSLLGAPVRRDLRNQNSAQPPLLSRI--PAAIPLSSLQPQGGWLVEEDTSRAQSNNRPSA 565
Query: 182 IGPEFQ-------RSLQNSLSRGTPTTVPVE---LSHINQVKTEE 286
E R LQN L+ G + P +SH +++K EE
Sbjct: 566 TAQELDSLKSDKLRGLQNPLAHGASASAPAPSSLVSHSSELKVEE 610
>ref|XP_006373979.1| hypothetical protein POPTR_0016s12200g [Populus trichocarpa]
gi|550321330|gb|ERP51776.1| hypothetical protein
POPTR_0016s12200g [Populus trichocarpa]
Length = 765
Score = 64.3 bits (155), Expect = 2e-08
Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Frame = +2
Query: 2 PSLLGDPFRRDGRYLASTEPPILSRLXXXXXXXXXXXXXKGGWIVEDDTSRGNLSNRTPG 181
PSLLG P RRD R S +PP+LSR+ +GGW+VE+DTSR +NR
Sbjct: 508 PSLLGAPVRRDLRNQNSAQPPLLSRI--PAAIPLSSLQPQGGWLVEEDTSRAQSNNRPSA 565
Query: 182 IGPEFQ-------RSLQNSLSRGTPTTVPVE---LSHINQVKTEE 286
E R LQN L+ G + P +SH +++K EE
Sbjct: 566 TAQELDSLKSDKLRGLQNPLAHGASASAPAPSSLVSHSSELKVEE 610
>gb|EXC23668.1| hypothetical protein L484_015578 [Morus notabilis]
Length = 740
Score = 59.7 bits (143), Expect = 4e-07
Identities = 52/153 (33%), Positives = 68/153 (44%), Gaps = 37/153 (24%)
Frame = +2
Query: 2 PSLLGDPFRRDG---------------------RYLASTEPPILSRLXXXXXXXXXXXXX 118
P LLG P RRDG R +S EPP+LSRL
Sbjct: 492 PGLLGTPVRRDGFSDRDHDMKKGVSTLKYGVEMRNQSSGEPPLLSRLPTHLSMPPVQAH- 550
Query: 119 KGGWIVEDDTSRGNLSNRTPG-------IGPEFQRSLQNSLSRGTPTTVPVE-LSHINQV 274
GGW+VEDD +RG L NR G + PE QR+ QNS S T P LS +V
Sbjct: 551 -GGWLVEDDINRGPLRNRPSGLVQESDVLKPEKQRAHQNSSSYTTSCYTPTGLLSQTPEV 609
Query: 275 KTEE--------KQGPLLLNQFADYAMPIDQSS 349
K+EE KQ +++Q +D + +Q++
Sbjct: 610 KSEEGHNGNSLQKQNLPIVSQLSDAGVSQNQAA 642
>ref|XP_002528114.1| double-stranded RNA binding protein, putative [Ricinus communis]
gi|223532503|gb|EEF34293.1| double-stranded RNA binding
protein, putative [Ricinus communis]
Length = 786
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Frame = +2
Query: 2 PSLLGDPFRRDGRYLASTEPPILSRLXXXXXXXXXXXXXKGGWIVEDDTSRGNLSNRTPG 181
PSLLG P RRD R S +PP+LSR+ +GGW+VE+D SR ++++R+ G
Sbjct: 471 PSLLGTPVRRDLRNQTSGQPPLLSRV--PAPLPSSSIQPQGGWLVEEDISRAHINSRSSG 528
Query: 182 IGPEFQ-------RSLQNSLSRGTPTTVPV-ELSHINQVKTEE 286
E R+ N TP + + H +QVK EE
Sbjct: 529 FAQESDILKSDKLRTHLNPFVHSTPVSASTSSVFHASQVKGEE 571
>ref|XP_006366356.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
2-like [Solanum tuberosum]
Length = 811
Score = 55.5 bits (132), Expect = 8e-06
Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 29/105 (27%)
Frame = +2
Query: 2 PSLLGDPFRRDG----------------------RYLASTEPPILSRLXXXXXXXXXXXX 115
PSLLG PFRRD RY S EPP+L R+
Sbjct: 510 PSLLGAPFRRDNSFSEADVDGKRRYPILNPSQDMRYRGSAEPPLLPRVPQKPPILPIPS- 568
Query: 116 XKGGWIVEDDTSRGNLSNRTPGIGPEF-------QRSLQNSLSRG 229
+GGW+VEDD ++G + +R+PGI E QR QN LS+G
Sbjct: 569 -QGGWLVEDDLNKGQMGSRSPGIFQESDASRYAKQRGHQNFLSQG 612