BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00018576
         (431 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus...   108   8e-22
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    99   6e-19
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    97   2e-18
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]        90   3e-16
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...    81   1e-13
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...    75   9e-12
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    62   8e-08
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch...    62   8e-08
ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast ...    59   7e-07
ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isof...    57   2e-06
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof...    57   2e-06
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...    57   2e-06

>gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus guttatus]
          Length = 941

 Score =  108 bits (270), Expect = 8e-22
 Identities = 56/112 (50%), Positives = 67/112 (59%)
 Frame = +2

Query: 95  PETPXXXXXXXXXXXXFPQTLKLPSFHNXXXXXXXXVSDATDHNYTGNAENMSNLQVIPN 274
           PE P            FPQ LKLPS HN        VSD++D N+ GN + ++ LQ    
Sbjct: 4   PEAPILSQSPQFSSSSFPQNLKLPSLHNPALLLPPPVSDSSDDNFRGNLDKVATLQ---- 59

Query: 275 GFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRKY 430
                   ES  RVFI+DPPWIS+LFMKNLLFRS+   G+K+EFQEMERRKY
Sbjct: 60  --------ESKDRVFIQDPPWISSLFMKNLLFRSRNRGGVKIEFQEMERRKY 103


>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Solanum lycopersicum]
          Length = 1007

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 48/95 (50%), Positives = 62/95 (65%)
 Frame = +2

Query: 143 FPQTLKLPSFHNXXXXXXXXVSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFI 322
           FP+TLKLP            V  +TD N T N E + NLQ IPNG+P  L  ES  RVFI
Sbjct: 74  FPKTLKLPIIQLPITVHSEVVCVSTDENLTENLEELVNLQKIPNGYPLVLQKESNKRVFI 133

Query: 323 RDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRK 427
           +DPPW+S+LFM NL  R+K+  G++ EF+E+ERR+
Sbjct: 134 QDPPWVSSLFMNNLFVRAKQVKGVRREFREIERRR 168


>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Solanum tuberosum]
          Length = 1015

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 47/95 (49%), Positives = 62/95 (65%)
 Frame = +2

Query: 143 FPQTLKLPSFHNXXXXXXXXVSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFI 322
           FP+TLKLP            V  +TD N T N E + NLQ IPNG+P  L  ES  RVFI
Sbjct: 82  FPKTLKLPVIQLPITVHSEVVCVSTDENLTENLEELVNLQKIPNGYPLVLQKESNKRVFI 141

Query: 323 RDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRK 427
           +DPPW+S+LFM +L  R+K+  G++ EF+E+ERR+
Sbjct: 142 QDPPWVSSLFMNSLFVRAKQVKGVRREFREIERRR 176


>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
          Length = 952

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
 Frame = +2

Query: 143 FPQTLKLPSFHNXXXXXXXXVSDATDHNYTGNAENMSNLQVIPNG-FPSKLPSESGGRV- 316
           FP+ +KLPS H         VSD++D N+T N  N++ + V PNG   S+   E   RV 
Sbjct: 19  FPRNVKLPSLHTPAPFLSHPVSDSSDDNFTENPGNLATMLVTPNGGISSEFSKELRDRVV 78

Query: 317 FIRDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRKY 430
            I+DPPWIS+L++K+LLFR++    +K+EF+EMER KY
Sbjct: 79  IIQDPPWISSLYIKSLLFRNRNRCDVKIEFKEMERHKY 116


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic;
           AltName: Full=NictaRpoT3-tom; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 3B;
           Flags: Precursor gi|21425667|emb|CAC95021.2| chloroplast
           RNA polymerase [Nicotiana tabacum]
          Length = 977

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/97 (47%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
 Frame = +2

Query: 143 FPQTLKLPSFHNXXXXXXXX--VSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRV 316
           FP+TLKLP  H           V  +TD N     E + NLQ IPNGF +K   ES  RV
Sbjct: 48  FPKTLKLPVIHMPINNIQSQTTVCVSTDENL----EELVNLQKIPNGFLNK---ESNKRV 100

Query: 317 FIRDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRK 427
           FI+DPPW+S+LFM +L  R+K+  G++ EF+E+ERR+
Sbjct: 101 FIQDPPWVSSLFMNSLFVRAKQVQGVRREFREIERRR 137


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic;
           AltName: Full=NsRpoT-C; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 3;
           Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC
           RecName: Full=DNA-directed RNA polymerase 3A,
           chloroplastic; AltName: Full=NictaRpoT3-syl; AltName:
           Full=T7 bacteriophage-type single subunit RNA polymerase
           3A; Flags: Precursor gi|21425641|emb|CAC82576.3|
           phage-type RNA polymerase [Nicotiana sylvestris]
           gi|21425679|emb|CAC95027.2| plastid RNA polymerase
           [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 977

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
 Frame = +2

Query: 143 FPQTLKLPSFH---NXXXXXXXXVSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGR 313
           FP+TLKLP      N        V  +TD N     E + NLQ I NG  +K   ES  R
Sbjct: 48  FPKTLKLPVIQMPINNNIQSQTTVCVSTDENL----EELVNLQKIANGVLTK---ESNKR 100

Query: 314 VFIRDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRK 427
           VFI+DPPW+S+LFM +L  R+K+  G++ EF+E+ERR+
Sbjct: 101 VFIQDPPWVSSLFMNSLFVRAKQVQGVRREFREIERRR 138


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Cucumis sativus]
          Length = 975

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = +2

Query: 203 VSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKK 382
           ++D+   N+T   +N  NLQ+  +        ES  R+FI+DPPWI++LF+K L    +K
Sbjct: 67  LADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGLYKCVQK 126

Query: 383 SSGIKLEFQEMERRKY 430
              +KLEF E+E+RKY
Sbjct: 127 E--VKLEFMEIEKRKY 140


>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Cucumis sativus]
          Length = 975

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = +2

Query: 203 VSDATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKK 382
           ++D+   N+T   +N  NLQ+  +        ES  R+FI+DPPWI++LF+K L    +K
Sbjct: 67  LADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGLYKCVQK 126

Query: 383 SSGIKLEFQEMERRKY 430
              +KLEF E+E+RKY
Sbjct: 127 E--VKLEFMEIEKRKY 140


>ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast precursor, putative
           [Ricinus communis] gi|223532193|gb|EEF33998.1|
           DNA-directed RNA polymerase 3B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 1000

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 41/99 (41%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
 Frame = +2

Query: 143 FPQTLKLPSFHNXXXXXXXXVSDATDHNYTGN---AENMSNLQVIPNGFPSKLPSESGGR 313
           FP+ L LP FH         + +    N  GN    E +  L +  N     LP ES  R
Sbjct: 56  FPRNL-LP-FHPLHDAVEEHLLEDLVENPIGNHQKLETLIKLDLPTNHNHQVLPEESSRR 113

Query: 314 VFIRDPPWISALFMKNLLFRSKKSSGIKLEFQEMERRKY 430
           VFI+DPPWISALF K L     K   +KLEF+++E+RKY
Sbjct: 114 VFIQDPPWISALFFKGLYKIPNKE--VKLEFKDIEKRKY 150


>ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
           gi|508784242|gb|EOY31498.1| DNA/RNA polymerases
           superfamily protein isoform 3 [Theobroma cacao]
          Length = 927

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/74 (41%), Positives = 45/74 (60%)
 Frame = +2

Query: 209 DATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKKSS 388
           D+   N+  N EN SN  +        L  ES  R+FI+DPPWISALF+K L   + ++ 
Sbjct: 69  DSLHDNFVENIENPSNFLLPKAQSHQILSPESTPRLFIQDPPWISALFLKGLYKMTNQT- 127

Query: 389 GIKLEFQEMERRKY 430
            +K+E +E+E+RKY
Sbjct: 128 -VKIEHKEIEKRKY 140


>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
           gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
           superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/74 (41%), Positives = 45/74 (60%)
 Frame = +2

Query: 209 DATDHNYTGNAENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKKSS 388
           D+   N+  N EN SN  +        L  ES  R+FI+DPPWISALF+K L   + ++ 
Sbjct: 69  DSLHDNFVENIENPSNFLLPKAQSHQILSPESTPRLFIQDPPWISALFLKGLYKMTNQT- 127

Query: 389 GIKLEFQEMERRKY 430
            +K+E +E+E+RKY
Sbjct: 128 -VKIEHKEIEKRKY 140


>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
           gi|462398756|gb|EMJ04424.1| hypothetical protein
           PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 41/63 (65%)
 Frame = +2

Query: 242 ENMSNLQVIPNGFPSKLPSESGGRVFIRDPPWISALFMKNLLFRSKKSSGIKLEFQEMER 421
           EN  N Q+  + F    P ES  R+FI+DPPWI++LF+K +  R+ +   +KLE +E+ER
Sbjct: 79  ENSMNFQIPMSEFHLITPQESAPRIFIQDPPWIASLFLKGIYKRANQE--LKLESKEIER 136

Query: 422 RKY 430
           R Y
Sbjct: 137 RNY 139