BLASTX nr result
ID: Mentha24_contig00017401
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00017401
(1086 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU42962.1| hypothetical protein MIMGU_mgv1a021045mg [Mimulus... 583 e-164
ref|XP_006345374.1| PREDICTED: pentatricopeptide repeat-containi... 516 e-144
emb|CBI17752.3| unnamed protein product [Vitis vinifera] 513 e-143
ref|XP_002304774.1| pentatricopeptide repeat-containing family p... 456 e-126
ref|XP_007220734.1| hypothetical protein PRUPE_ppa023145mg [Prun... 450 e-124
ref|NP_193806.1| pentatricopeptide repeat-containing protein [Ar... 450 e-124
ref|XP_006413862.1| hypothetical protein EUTSA_v10024515mg [Eutr... 449 e-124
ref|XP_002869928.1| pentatricopeptide repeat-containing protein ... 445 e-122
ref|XP_004140286.1| PREDICTED: pentatricopeptide repeat-containi... 444 e-122
gb|EXC10461.1| hypothetical protein L484_008628 [Morus notabilis] 441 e-121
ref|XP_006283187.1| hypothetical protein CARUB_v10004218mg, part... 441 e-121
ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ... 439 e-121
ref|XP_004229293.1| PREDICTED: pentatricopeptide repeat-containi... 434 e-119
ref|XP_006482966.1| PREDICTED: pentatricopeptide repeat-containi... 430 e-118
ref|XP_004494981.1| PREDICTED: pentatricopeptide repeat-containi... 430 e-118
ref|XP_007008770.1| Pentatricopeptide repeat (PPR-like) superfam... 429 e-118
ref|XP_006605814.1| PREDICTED: pentatricopeptide repeat-containi... 427 e-117
ref|XP_006438906.1| hypothetical protein CICLE_v10030824mg [Citr... 427 e-117
ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi... 422 e-116
ref|XP_004515007.1| PREDICTED: pentatricopeptide repeat-containi... 421 e-115
>gb|EYU42962.1| hypothetical protein MIMGU_mgv1a021045mg [Mimulus guttatus]
Length = 726
Score = 583 bits (1502), Expect = e-164
Identities = 281/360 (78%), Positives = 319/360 (88%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPSAASDEPFDLRKWDPEDESNLKLPYVKDPSERFFIS 185
+RPTVRGGLFSNRQT+NP+ F R +AA EPFDL+KWDP+DE+N K PY KDPSE+FF
Sbjct: 29 SRPTVRGGLFSNRQTVNPENFRRRTAAH-EPFDLQKWDPDDEANRKPPYGKDPSEKFFSL 87
Query: 186 AKNLSPIARYIVDAFRTHKNWNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKFFNW 365
AKNLSPIARYIVDAFR HK W+ +LV ELNRLRRVTP LV EVLKFP+VDPR+SSKFF+W
Sbjct: 88 AKNLSPIARYIVDAFRKHKQWSPQLVQELNRLRRVTPTLVTEVLKFPDVDPRVSSKFFHW 147
Query: 366 AGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAK 545
AGKQKGY+HDFACYNA+AYFLNR+NHFR+ADQ+PELMHMQGKPP+EKQFEILIRMHAD+
Sbjct: 148 AGKQKGYKHDFACYNAYAYFLNRSNHFREADQLPELMHMQGKPPTEKQFEILIRMHADSN 207
Query: 546 RGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYM 725
RGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKT+HLDLAMSVY DFKE+GL EEN+TYM
Sbjct: 208 RGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTNHLDLAMSVYRDFKEEGLSEENVTYM 267
Query: 726 ILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKD 905
ILIKGLCKAGR+DE+F L+D+MRKNL KPDVFAYTAMVKVL++EGNL+GCL VW+EM KD
Sbjct: 268 ILIKGLCKAGRLDEMFDLVDRMRKNLCKPDVFAYTAMVKVLVSEGNLNGCLTVWEEMKKD 327
Query: 906 RIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRVGSA 1085
++PD MAY+TL+MALC+G VD LIDRA+YGSLIEAYVVDG+VGSA
Sbjct: 328 GVEPDSMAYSTLIMALCEGKFVDKGYELFKEMKGRNCLIDRAIYGSLIEAYVVDGKVGSA 387
Score = 73.2 bits (178), Expect = 2e-10
Identities = 48/201 (23%), Positives = 91/201 (45%)
Frame = +3
Query: 372 KQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRG 551
K+ G + YN L + NH A V +G + ILI+ A R
Sbjct: 220 KKFGVKPRVFLYNRIMDALVKTNHLDLAMSVYRDFKEEGLSEENVTYMILIKGLCKAGRL 279
Query: 552 LRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMIL 731
+ + ++M+K KP VF Y ++ LV +L+ ++V+ + K+DG+ ++M Y L
Sbjct: 280 DEMFDLVDRMRKNLCKPDVFAYTAMVKVLVSEGNLNGCLTVWEEMKKDGVEPDSMAYSTL 339
Query: 732 IKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRI 911
I LC+ +D+ + L +M+ D Y ++++ + +G + + +++
Sbjct: 340 IMALCEGKFVDKGYELFKEMKGRNCLIDRAIYGSLIEAYVVDGKVGSACDLLKDLINSGY 399
Query: 912 DPDVMAYTTLVMALCKGNRVD 974
D+ Y +L+ LC VD
Sbjct: 400 RADLAIYNSLIKGLCNSKLVD 420
>ref|XP_006345374.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Solanum tuberosum]
Length = 720
Score = 516 bits (1329), Expect = e-144
Identities = 253/362 (69%), Positives = 295/362 (81%), Gaps = 2/362 (0%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSR--PSAASDEPFDLRKWDPEDESNLKLPYVKDPSERFF 179
+RPTV+GGLFSNRQTINP + ++ PS+ + F L+KWDP+ S + +DPS+ FF
Sbjct: 22 HRPTVQGGLFSNRQTINPNRTTKNSPSSVTQGDFQLQKWDPDGVSGQQS---RDPSQEFF 78
Query: 180 ISAKNLSPIARYIVDAFRTHKNWNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKFF 359
A+ LSPIARYIVD+FR H NW A L+A+LN LRRVTPKLV EVLK PN+DP++SSKFF
Sbjct: 79 SLAQRLSPIARYIVDSFRKHGNWGAPLLADLNSLRRVTPKLVTEVLKHPNLDPKISSKFF 138
Query: 360 NWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHAD 539
WAGKQKGYRHDF+CYNAFAY LNRAN FR ADQVPELMHMQGKPPSEKQFEILIRMH D
Sbjct: 139 YWAGKQKGYRHDFSCYNAFAYGLNRANQFRTADQVPELMHMQGKPPSEKQFEILIRMHGD 198
Query: 540 AKRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMT 719
A RGLRV+YVYEKMKKFGVKPRVFLYNRIMDALVKT+HLD+AMSVY DFK+DGLVEE+MT
Sbjct: 199 ANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDALVKTNHLDMAMSVYDDFKKDGLVEESMT 258
Query: 720 YMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEML 899
+MILIKGLCK GRMDEVF LL +MR+N KPDVFAYTAMVK+L+AE NLDGC VW EM
Sbjct: 259 FMILIKGLCKLGRMDEVFELLGRMRENRCKPDVFAYTAMVKILVAERNLDGCSKVWKEMQ 318
Query: 900 KDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRVG 1079
+D ++PDV+AY+T + LCK N+VD LIDR +YGSLIE++V +G+VG
Sbjct: 319 QDAVEPDVIAYSTFIAGLCKNNQVDKGYELFKEMKQKNILIDRGIYGSLIESFVANGKVG 378
Query: 1080 SA 1085
A
Sbjct: 379 LA 380
Score = 68.9 bits (167), Expect = 3e-09
Identities = 47/201 (23%), Positives = 88/201 (43%)
Frame = +3
Query: 372 KQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRG 551
K+ G + YN L + NH A V + G F ILI+ R
Sbjct: 213 KKFGVKPRVFLYNRIMDALVKTNHLDMAMSVYDDFKKDGLVEESMTFMILIKGLCKLGRM 272
Query: 552 LRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMIL 731
V + +M++ KP VF Y ++ LV +LD V+ + ++D + + + Y
Sbjct: 273 DEVFELLGRMRENRCKPDVFAYTAMVKILVAERNLDGCSKVWKEMQQDAVEPDVIAYSTF 332
Query: 732 IKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRI 911
I GLCK ++D+ + L +M++ D Y ++++ +A G + + ++++
Sbjct: 333 IAGLCKNNQVDKGYELFKEMKQKNILIDRGIYGSLIESFVANGKVGLACDLLKDLIESGY 392
Query: 912 DPDVMAYTTLVMALCKGNRVD 974
D+ Y +++ LC R D
Sbjct: 393 RADLAIYNSIIEGLCNAKRTD 413
>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 513 bits (1320), Expect = e-143
Identities = 257/360 (71%), Positives = 291/360 (80%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPSAASDEPFDLRKWDPEDESNLKLPYVKDPSERFFIS 185
NRPTV GGLFSNR T+NPK + + + F+L+ WDP+ L +P K P ERFF
Sbjct: 25 NRPTVHGGLFSNRTTLNPKPPTLQNPTTH--FNLQNWDPDSPKALAIPPSKTPCERFFDI 82
Query: 186 AKNLSPIARYIVDAFRTHKNWNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKFFNW 365
AKNLSPIARYI D+FR H+NW +VA+LN+LRRVTP LVAEVLK DP + SKFF+W
Sbjct: 83 AKNLSPIARYICDSFRKHRNWGPPVVADLNKLRRVTPVLVAEVLKV-QTDPVICSKFFHW 141
Query: 366 AGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAK 545
AGKQKGY+H+FA YNAFAY LNR+N FR ADQVPELM+MQGKPPSEKQFEILIRMH DA
Sbjct: 142 AGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQFEILIRMHIDAN 201
Query: 546 RGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYM 725
RGLRV+YVYEKMKKFG+KPRVFLYNRIMD LVKT HLDLAMSVY DFKEDGLVEE++TYM
Sbjct: 202 RGLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYM 261
Query: 726 ILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKD 905
IL+KGLCKAGR+DEV LLD+MR NL KPDVFAYTAMVKVL+AEGNLDGCL VW+EM KD
Sbjct: 262 ILVKGLCKAGRIDEVLELLDRMRGNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKD 321
Query: 906 RIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRVGSA 1085
+++PDVMAYTTLV ALC GNRV LIDRA+YGSLIE +VV+ RVGSA
Sbjct: 322 KVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSA 381
>ref|XP_002304774.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222842206|gb|EEE79753.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 728
Score = 456 bits (1173), Expect = e-126
Identities = 230/368 (62%), Positives = 280/368 (76%), Gaps = 8/368 (2%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPSAASDEPFDLRKWDPEDESNLKLPYVKDPSE----- 170
NRP VRGGLF+NRQT+ P+ P +PFDL KWDP+ LP+ PS+
Sbjct: 28 NRPVVRGGLFTNRQTVKPQPPKNPITPF-KPFDLHKWDPQQN----LPHQPQPSKPQSPR 82
Query: 171 --RFFISAKNLSPIARYIVDAFRTHKN-WNAELVAELNRLRRVTPKLVAEVLKFPNVDPR 341
++ LSPIAR+I+DAFR ++N W E+V EL +LRRVTP LVAEVLK N +P+
Sbjct: 83 SRHSLALSQRLSPIARFILDAFRKNRNQWGPEVVTELCKLRRVTPDLVAEVLKVEN-NPQ 141
Query: 342 LSSKFFNWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEIL 521
L++KFF+WAGKQKG++H FA YNAFAY LNR+N FR ADQ+PELM QGKPP+EKQFEIL
Sbjct: 142 LATKFFHWAGKQKGFKHTFASYNAFAYNLNRSNFFRAADQLPELMEAQGKPPTEKQFEIL 201
Query: 522 IRMHADAKRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGL 701
IRMH+DA RGLRV+YVY+KM KFGVKPRVFLYNRIMD+L+KT HLDLA+SVY DF+ DGL
Sbjct: 202 IRMHSDANRGLRVYYVYQKMVKFGVKPRVFLYNRIMDSLIKTGHLDLALSVYEDFRRDGL 261
Query: 702 VEENMTYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLM 881
VEE++TYMILIKGLCKAGR++E+ +L +MR+NL KPDVFAYTAMV+ L EGNLD CL
Sbjct: 262 VEESVTYMILIKGLCKAGRIEEMMEVLGRMRENLCKPDVFAYTAMVRALAGEGNLDACLR 321
Query: 882 VWDEMLKDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYV 1061
VW+EM +D ++PDVMAY TLV ALCKG RVD LIDR +YG L+EA+V
Sbjct: 322 VWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYEVFKEMKGRRILIDRGIYGILVEAFV 381
Query: 1062 VDGRVGSA 1085
DG++G A
Sbjct: 382 ADGKIGLA 389
Score = 75.9 bits (185), Expect = 3e-11
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 5/195 (2%)
Frame = +3
Query: 405 YNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRGLRVHYVYEKMK 584
YN L + H A V E G + ILI+ A R + V +M+
Sbjct: 233 YNRIMDSLIKTGHLDLALSVYEDFRRDGLVEESVTYMILIKGLCKAGRIEEMMEVLGRMR 292
Query: 585 KFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMILIKGLCKAGRMD 764
+ KP VF Y ++ AL +LD + V+ + K DG+ + M Y+ L+ LCK GR+D
Sbjct: 293 ENLCKPDVFAYTAMVRALAGEGNLDACLRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVD 352
Query: 765 EVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLD-GCLMVWDEMLKDRID----PDVMA 929
+ + + +M+ D Y +V+ +A+G + C ++LKD +D D+
Sbjct: 353 KGYEVFKEMKGRRILIDRGIYGILVEAFVADGKIGLAC-----DLLKDLVDSGYRADLRI 407
Query: 930 YTTLVMALCKGNRVD 974
Y +L+ C RVD
Sbjct: 408 YNSLIEGFCNVKRVD 422
Score = 57.8 bits (138), Expect = 8e-06
Identities = 46/198 (23%), Positives = 84/198 (42%)
Frame = +3
Query: 381 GYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRGLRV 560
GYR D YN+ A ++ ++ +G K L+ +A+ K+
Sbjct: 400 GYRADLRIYNSLIEGFCNVKRVDKAHKLFQVTVQEGLERDFKTVNPLLMSYAEMKKMDDF 459
Query: 561 HYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMILIKG 740
+ ++M+K G L + K + +A+ V+ D K G + Y IL++
Sbjct: 460 CKLLKQMEKLGFSVFDDLSKFFSYVVGKPERTMMALEVFEDLKVKGYSSVPI-YNILMEA 518
Query: 741 LCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRIDPD 920
L G M L +M K+L+KPD Y+ + + +GN+ + +++++ P
Sbjct: 519 LLTIGEMKRALSLFGEM-KDLNKPDSTTYSIAIICFVEDGNIQEACVSHNKIVEMFCVPS 577
Query: 921 VMAYTTLVMALCKGNRVD 974
V AY +L LC +D
Sbjct: 578 VAAYCSLAKGLCDNGEID 595
>ref|XP_007220734.1| hypothetical protein PRUPE_ppa023145mg [Prunus persica]
gi|462417196|gb|EMJ21933.1| hypothetical protein
PRUPE_ppa023145mg [Prunus persica]
Length = 721
Score = 450 bits (1157), Expect = e-124
Identities = 231/361 (63%), Positives = 279/361 (77%), Gaps = 1/361 (0%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPSAASDEPFDLRKWDPEDESNLKLPYVKDPSERFFIS 185
NRP VRGGLFSNR ++ +++ +A +PF+L KWDP + +P++ +S
Sbjct: 25 NRPRVRGGLFSNRVSLPNRRYPI-AAPQPQPFELSKWDPHLPQSSPSTSSSNPADTTLLS 83
Query: 186 AKNLSPIARYIVDAFRTHKN-WNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKFFN 362
LSPIAR+I+DAFR ++N W +V+EL +LRRVTP LVAEVLK N DP +SKFF+
Sbjct: 84 F--LSPIARFILDAFRKNQNHWGPPVVSELRKLRRVTPDLVAEVLKVQN-DPVSASKFFH 140
Query: 363 WAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADA 542
WAGKQKG++H +A YNA AY LNR+N FR ADQVPELM QGKPPSEKQFEILIRMH+DA
Sbjct: 141 WAGKQKGFKHTYASYNALAYCLNRSNRFRSADQVPELMDSQGKPPSEKQFEILIRMHSDA 200
Query: 543 KRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTY 722
RGLRV+YVYEKMKKFGVKPRVFLYNRIMDALVK+ +LDLA+SVY DF+ DGLVEE++T+
Sbjct: 201 NRGLRVYYVYEKMKKFGVKPRVFLYNRIMDALVKSGYLDLALSVYEDFRGDGLVEESVTF 260
Query: 723 MILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLK 902
MILIKGLCK GRMDE+ +LL++MR NL KPDVFAYTAMVKVLI+EGNLDGCL VW+EM +
Sbjct: 261 MILIKGLCKMGRMDEMLQLLERMRVNLCKPDVFAYTAMVKVLISEGNLDGCLRVWEEMKR 320
Query: 903 DRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRVGS 1082
DR+ DVMAY TLV LCKG RV+ LIDRA+YG LIE +V D +VG+
Sbjct: 321 DRVGADVMAYATLVTGLCKGGRVEKGYKLFREMKVKGFLIDRAIYGVLIEGFVADRKVGA 380
Query: 1083 A 1085
A
Sbjct: 381 A 381
>ref|NP_193806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75211707|sp|Q9SVH3.1|PP328_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g20740 gi|5262214|emb|CAB45840.1| putative protein
[Arabidopsis thaliana] gi|7268870|emb|CAB79074.1|
putative protein [Arabidopsis thaliana]
gi|332658957|gb|AEE84357.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 450 bits (1157), Expect = e-124
Identities = 234/366 (63%), Positives = 277/366 (75%), Gaps = 6/366 (1%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRP---SAASDEPFDLRKWDPEDESNLKLPYVKDPSERF 176
NRPTV GGLFSNRQ+I P+ +P S A PFDLRKWDPE LP PS
Sbjct: 28 NRPTVYGGLFSNRQSI-PRVSPQPQSNSLAHRTPFDLRKWDPETH----LPPPSPPSHST 82
Query: 177 FISA--KNLSPIARYIVDAFRTHKN-WNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLS 347
ISA + LSPIAR+++DAFR ++N W +V+ELN+LRRVTP +VAEVLK N D ++
Sbjct: 83 VISAASERLSPIARFVLDAFRKNRNHWGPSVVSELNKLRRVTPSIVAEVLKLGN-DAAVA 141
Query: 348 SKFFNWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIR 527
+KFF+WAGKQKGY+HDFA YNAFAY LNR HFR ADQ+PELM QG+PPSEKQFEILIR
Sbjct: 142 AKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIR 201
Query: 528 MHADAKRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVE 707
MHAD +RGLRV+YVYEKMKKFG KPRVFLYNRIMDALVK + DLA++VY DFKEDGLVE
Sbjct: 202 MHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVE 261
Query: 708 ENMTYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVW 887
E+ T+MIL+KGLCKAGR++E+ +L +MR+NL KPDVFAYTAM+K L++EGNLD L VW
Sbjct: 262 ESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVW 321
Query: 888 DEMLKDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVD 1067
DEM +D I PDVMAY TLV+ LCK RV+ LIDR +Y LIE +V D
Sbjct: 322 DEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVAD 381
Query: 1068 GRVGSA 1085
G+V SA
Sbjct: 382 GKVRSA 387
Score = 81.3 bits (199), Expect = 7e-13
Identities = 56/235 (23%), Positives = 103/235 (43%)
Frame = +3
Query: 372 KQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRG 551
K+ G++ YN L + +F A V E G F IL++ A R
Sbjct: 220 KKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRI 279
Query: 552 LRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMIL 731
+ + ++M++ KP VF Y ++ LV +LD ++ V+ + + D + + M Y L
Sbjct: 280 EEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTL 339
Query: 732 IKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRI 911
+ GLCK GR++ + L +M+ D Y +++ +A+G + +W++++
Sbjct: 340 VVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGY 399
Query: 912 DPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRV 1076
D+ Y ++ LC N+VD D ++ AYVV R+
Sbjct: 400 IADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRL 454
>ref|XP_006413862.1| hypothetical protein EUTSA_v10024515mg [Eutrema salsugineum]
gi|557115032|gb|ESQ55315.1| hypothetical protein
EUTSA_v10024515mg [Eutrema salsugineum]
Length = 735
Score = 449 bits (1155), Expect = e-124
Identities = 225/363 (61%), Positives = 273/363 (75%), Gaps = 3/363 (0%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPSAASDE--PFDLRKWDPEDESNLKLPYVKDPSERFF 179
NRP V GGLFSNRQ ++ PS A + PFDLRKWDPE + PS
Sbjct: 28 NRPVVHGGLFSNRQYLSRDPPQSPSNAVADRIPFDLRKWDPESRLPSERASSSSPSTSIS 87
Query: 180 ISAKNLSPIARYIVDAFRTHKN-WNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKF 356
+++ LSPIAR+++DAFR ++N W +V+ELN+LRRVTP +VAEVLK N D +S+KF
Sbjct: 88 AASERLSPIARFVLDAFRKNRNRWGPSVVSELNKLRRVTPSIVAEVLKVGN-DAAVSAKF 146
Query: 357 FNWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHA 536
F+WAGKQKGY+HDFA YNAFAY LNR HFR ADQ+PELM QG+PPSEKQFEILIRMH+
Sbjct: 147 FHWAGKQKGYKHDFAAYNAFAYCLNRTGHFRAADQLPELMDSQGRPPSEKQFEILIRMHS 206
Query: 537 DAKRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENM 716
D KRGLRV+YVYEKMKKFG KPRVFLYNRIMDAL+KT + DLA++VY DFKEDGLVEE+
Sbjct: 207 DNKRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALMKTGYFDLALAVYEDFKEDGLVEEST 266
Query: 717 TYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEM 896
T+MIL+KGLCK+GRM+E+ +L +MR+NL +PDVFAYTAM+K L++EGN+D L VWDEM
Sbjct: 267 TFMILVKGLCKSGRMEEMLEILQRMRENLCRPDVFAYTAMIKTLVSEGNMDASLRVWDEM 326
Query: 897 LKDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRV 1076
+D + PDVMAY TLVM LCK RV+ LIDR +Y LIE +V DG+V
Sbjct: 327 KRDEVKPDVMAYGTLVMGLCKDGRVEKGYELFMEMKEKQILIDRDIYRVLIEGFVADGKV 386
Query: 1077 GSA 1085
SA
Sbjct: 387 RSA 389
Score = 77.0 bits (188), Expect = 1e-11
Identities = 53/235 (22%), Positives = 103/235 (43%)
Frame = +3
Query: 372 KQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRG 551
K+ G++ YN L + +F A V E G F IL++ + R
Sbjct: 222 KKFGFKPRVFLYNRIMDALMKTGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKSGRM 281
Query: 552 LRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMIL 731
+ + ++M++ +P VF Y ++ LV ++D ++ V+ + K D + + M Y L
Sbjct: 282 EEMLEILQRMRENLCRPDVFAYTAMIKTLVSEGNMDASLRVWDEMKRDEVKPDVMAYGTL 341
Query: 732 IKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRI 911
+ GLCK GR+++ + L +M++ D Y +++ +A+G + +W +++
Sbjct: 342 VMGLCKDGRVEKGYELFMEMKEKQILIDRDIYRVLIEGFVADGKVRSACDLWKDLVDSGY 401
Query: 912 DPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRV 1076
D+ Y ++ LC +VD D ++ AYVV R+
Sbjct: 402 IADLGIYNAIIKGLCTVKQVDKAYKLFQIATEEELEPDFETLSPIMVAYVVMKRL 456
>ref|XP_002869928.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315764|gb|EFH46187.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 731
Score = 445 bits (1145), Expect = e-122
Identities = 228/365 (62%), Positives = 272/365 (74%), Gaps = 5/365 (1%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPS--AASDEPFDLRKWDPEDESNLKLPYVKDPSERFF 179
NRP V GGLFS RQ+++ PS A PFDLRKWDPE L+ PS
Sbjct: 28 NRPIVYGGLFSTRQSLSRDSPQSPSNAVAHRTPFDLRKWDPETHLPLERSSSSPPSHSTV 87
Query: 180 ISA--KNLSPIARYIVDAFRTHKN-WNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSS 350
ISA + LSPIAR+++DAFR ++N W +V+ELN+LRRVTP +VAEVLK N D ++
Sbjct: 88 ISAASERLSPIARFVLDAFRKNRNHWGPSVVSELNKLRRVTPSIVAEVLKLGN-DATAAA 146
Query: 351 KFFNWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRM 530
KFF+WAGKQKGY+HDFA YNAFAY LNR HFR ADQ+PELM QG+PPSEKQFEILIRM
Sbjct: 147 KFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRM 206
Query: 531 HADAKRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEE 710
HAD +RGLRV+YVYEKMKKFG KPRVFLYNRIMDALVK + DLA++VY DFKEDGLVEE
Sbjct: 207 HADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEE 266
Query: 711 NMTYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWD 890
+ T+MIL+KGLCKAGR++E+ +L +MR+NL KPDVFAYTAM+K L++EGNLD L VWD
Sbjct: 267 STTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWD 326
Query: 891 EMLKDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDG 1070
EM +D I PDVMAY TLV+ LCK R++ LIDR +Y LIE +V DG
Sbjct: 327 EMKRDEIKPDVMAYGTLVVGLCKDGRIERGYELFMEMKGKQILIDREIYRVLIEGFVADG 386
Query: 1071 RVGSA 1085
+V SA
Sbjct: 387 KVRSA 391
Score = 80.1 bits (196), Expect = 1e-12
Identities = 57/235 (24%), Positives = 102/235 (43%)
Frame = +3
Query: 372 KQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRG 551
K+ G++ YN L + +F A V E G F IL++ A R
Sbjct: 224 KKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRI 283
Query: 552 LRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMIL 731
+ + ++M++ KP VF Y ++ LV +LD ++ V+ + K D + + M Y L
Sbjct: 284 EEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMKRDEIKPDVMAYGTL 343
Query: 732 IKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRI 911
+ GLCK GR++ + L +M+ D Y +++ +A+G + +W +++
Sbjct: 344 VVGLCKDGRIERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACDLWKDLVDSGY 403
Query: 912 DPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRV 1076
D+ Y ++ LC N+VD D ++ AYVV R+
Sbjct: 404 IADLGIYNAVIKGLCSVNQVDKAYNLFQVAIEEELEPDFETLSPIMVAYVVMNRL 458
>ref|XP_004140286.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Cucumis sativus] gi|449531474|ref|XP_004172711.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Cucumis sativus]
Length = 726
Score = 444 bits (1141), Expect = e-122
Identities = 225/364 (61%), Positives = 274/364 (75%), Gaps = 4/364 (1%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPSAASDEPFDLRKWDPEDESNLKLPYVKDPSERFFIS 185
+RPTV GG F+NR+++ P +P++ +PF L WDP+ S + S+ FF +
Sbjct: 23 HRPTVYGGFFTNRRSLPPPSPHQPTSPKPQPFLLHNWDPDLPSQKRSNLPSSTSDAFFST 82
Query: 186 AKNLSPIARYIVDAFRTHKN-WNAELVAELNRLRRVTPKLVAEVLKFPN---VDPRLSSK 353
+ LSPIAR+IVD FR ++N W +++ELN+LRRVTP LVAEVLK + + L+SK
Sbjct: 83 SLRLSPIARFIVDVFRKNQNQWGPPVISELNKLRRVTPDLVAEVLKASHRRDSNSILASK 142
Query: 354 FFNWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMH 533
FF WAGKQKG+ H FA YNAFAY LNR N FR ADQ+PELM QGKPPSEKQFEILIRMH
Sbjct: 143 FFYWAGKQKGFHHTFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILIRMH 202
Query: 534 ADAKRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEEN 713
DA RGLRV+YVYEKMKKFGV PRVFLYNRI+DALVKTDHLDLA++VY DF+E+GLVEE+
Sbjct: 203 CDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDALVKTDHLDLALTVYRDFQENGLVEES 262
Query: 714 MTYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDE 893
+T+MILIKGLCKAGR+DE+ LL +MR NL KPDVFAYTAMVKVL ++ NL+GCL VWDE
Sbjct: 263 VTFMILIKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLASKDNLEGCLRVWDE 322
Query: 894 MLKDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGR 1073
M DR++PDVMAY TL++ LCK R LIDRA+YG+LIEA+V D +
Sbjct: 323 MRADRVEPDVMAYGTLIIGLCKVGRAQKGYELFQEMKGKRILIDRAIYGTLIEAFVQDEK 382
Query: 1074 VGSA 1085
VG A
Sbjct: 383 VGLA 386
Score = 62.8 bits (151), Expect = 2e-07
Identities = 46/190 (24%), Positives = 82/190 (43%)
Frame = +3
Query: 405 YNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRGLRVHYVYEKMK 584
YN L + +H A V G F ILI+ A R + + +M+
Sbjct: 230 YNRILDALVKTDHLDLALTVYRDFQENGLVEESVTFMILIKGLCKAGRVDEMLELLARMR 289
Query: 585 KFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMILIKGLCKAGRMD 764
KP VF Y ++ L D+L+ + V+ + + D + + M Y LI GLCK GR
Sbjct: 290 ANLCKPDVFAYTAMVKVLASKDNLEGCLRVWDEMRADRVEPDVMAYGTLIIGLCKVGRAQ 349
Query: 765 EVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRIDPDVMAYTTLV 944
+ + L +M+ D Y +++ + + + ++ +++ D+ Y +L+
Sbjct: 350 KGYELFQEMKGKRILIDRAIYGTLIEAFVQDEKVGLACDLFKDLVDSGYRADLGIYHSLI 409
Query: 945 MALCKGNRVD 974
LC N+VD
Sbjct: 410 KGLCNVNQVD 419
>gb|EXC10461.1| hypothetical protein L484_008628 [Morus notabilis]
Length = 716
Score = 441 bits (1133), Expect = e-121
Identities = 221/361 (61%), Positives = 269/361 (74%), Gaps = 1/361 (0%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPSAASDEPFDLRKWDPEDESNLKLPYVKDPSERFFIS 185
NRPTVRGGLFSNRQ++ P++ P P DL KWDP + P+ F
Sbjct: 25 NRPTVRGGLFSNRQSLKPRQ--NPHHHHKPPSDLSKWDPHLLPSPSSTTTTTPTLSF--- 79
Query: 186 AKNLSPIARYIVDAFR-THKNWNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKFFN 362
LSPIAR+I DAFR H W +V EL++LRRVTP LV EVLK DP L+SKFF+
Sbjct: 80 ---LSPIARFITDAFRKNHSKWGPPVVTELHKLRRVTPNLVTEVLKV-QTDPSLASKFFH 135
Query: 363 WAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADA 542
WAGKQKGYRH+FA YNAFAY LNR + +R ADQVP LM QGKPPSEKQFEILIRMH+DA
Sbjct: 136 WAGKQKGYRHNFASYNAFAYCLNRGDRYRSADQVPHLMEAQGKPPSEKQFEILIRMHSDA 195
Query: 543 KRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTY 722
RGLRV+Y YE MKKFG+KPRVFL+NR+MDALV+T +LDLA+SVY DFKE GLVEE++T+
Sbjct: 196 NRGLRVYYAYENMKKFGIKPRVFLFNRVMDALVRTGYLDLALSVYGDFKEAGLVEESVTF 255
Query: 723 MILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLK 902
MILIKGLCKAGR++E+ +L +MR L KPDVFAYTAMV+V++ EGNLDGCL VW+EM
Sbjct: 256 MILIKGLCKAGRVEEMLEVLGRMRGELCKPDVFAYTAMVRVMVGEGNLDGCLRVWEEMRS 315
Query: 903 DRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRVGS 1082
DR++PDV+AY T++ LCKG RV+ L+DRA+YG+L++A+V DG+VG
Sbjct: 316 DRVEPDVIAYGTVIAGLCKGGRVEKGYELFKEMKGKGALVDRAIYGALVKAFVEDGKVGL 375
Query: 1083 A 1085
A
Sbjct: 376 A 376
Score = 69.3 bits (168), Expect = 3e-09
Identities = 43/155 (27%), Positives = 76/155 (49%)
Frame = +3
Query: 510 FEILIRMHADAKRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFK 689
F ILI+ A R + V +M+ KP VF Y ++ +V +LD + V+ + +
Sbjct: 255 FMILIKGLCKAGRVEEMLEVLGRMRGELCKPDVFAYTAMVRVMVGEGNLDGCLRVWEEMR 314
Query: 690 EDGLVEENMTYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLD 869
D + + + Y +I GLCK GR+++ + L +M+ + D Y A+VK + +G +
Sbjct: 315 SDRVEPDVIAYGTVIAGLCKGGRVEKGYELFKEMKGKGALVDRAIYGALVKAFVEDGKVG 374
Query: 870 GCLMVWDEMLKDRIDPDVMAYTTLVMALCKGNRVD 974
V+ +++ D+ Y L+ LC RVD
Sbjct: 375 LACDVFKDLVNSGYRADLDIYNYLIQGLCNAKRVD 409
Score = 58.2 bits (139), Expect = 6e-06
Identities = 45/198 (22%), Positives = 86/198 (43%)
Frame = +3
Query: 381 GYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRGLRV 560
GYR D YN L A A ++ + +G P+ ++ +A+ ++
Sbjct: 387 GYRADLDIYNYLIQGLCNAKRVDKAYKLFRVTVQEGLGPNFVTINPILLCYAEMRKIDEF 446
Query: 561 HYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMILIKG 740
+ +M+K G+ L + K D L +A+ V+ D K G ++ Y IL++
Sbjct: 447 CDLLVQMQKLGISVVDDLTKFFSFVVRKGDGLKMALEVFEDLKVRGYYSVSI-YNILMEA 505
Query: 741 LCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRIDPD 920
K + LL++M+ ++PD Y+ ++ + EG+L +++++ P
Sbjct: 506 FYKTEMAKKALSLLNEMKDMNAQPDSSTYSVAIECFVEEGDLKEACACHNKIIEMSCVPS 565
Query: 921 VMAYTTLVMALCKGNRVD 974
V AY +L LC +D
Sbjct: 566 VSAYCSLARGLCNIGEID 583
>ref|XP_006283187.1| hypothetical protein CARUB_v10004218mg, partial [Capsella rubella]
gi|482551892|gb|EOA16085.1| hypothetical protein
CARUB_v10004218mg, partial [Capsella rubella]
Length = 745
Score = 441 bits (1133), Expect = e-121
Identities = 228/366 (62%), Positives = 273/366 (74%), Gaps = 6/366 (1%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTIN---PKKFSRPSAASDEPFDLRKWDPEDESNLKLPYVKDPSERF 176
NRP V GGLFSNRQ+++ P+ S + A PFDLRKWDPE + PS
Sbjct: 42 NRPIVYGGLFSNRQSLSRDSPQPQSN-AVAHRTPFDLRKWDPESHLPSERASSSPPSHST 100
Query: 177 FISA--KNLSPIARYIVDAFRTHKN-WNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLS 347
ISA + LSPIAR+++DAFR ++N W +V+ELN+LRRVTP +VAEVLK N D ++
Sbjct: 101 GISAASERLSPIARFVLDAFRKNRNHWGPSVVSELNKLRRVTPSIVAEVLKLGN-DAAVA 159
Query: 348 SKFFNWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIR 527
+KFF+WAGKQKGYRHDFA YNAFAY LNR HFR ADQ+PELM QG+PPSEKQFEILIR
Sbjct: 160 AKFFHWAGKQKGYRHDFASYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIR 219
Query: 528 MHADAKRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVE 707
MHAD KRGLRV+YVYEKMKKFG KPRVFLYNRIMDALVK + DLA++VY DFKEDGLVE
Sbjct: 220 MHADNKRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVE 279
Query: 708 ENMTYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVW 887
E+ T+MIL+KGLCKAGR++E+ +L +MR NL KPDVFAYTAM+K L++EGN+D L VW
Sbjct: 280 ESTTFMILVKGLCKAGRIEEMLEILQRMRANLCKPDVFAYTAMIKTLVSEGNMDASLQVW 339
Query: 888 DEMLKDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVD 1067
DEM +D I PDVMAY TLV LC+ RV+ LIDR +Y LIE +V +
Sbjct: 340 DEMKRDEIKPDVMAYGTLVTGLCRDGRVERGYELFMEMKEKQILIDREIYRVLIEGFVAE 399
Query: 1068 GRVGSA 1085
G+V SA
Sbjct: 400 GKVRSA 405
Score = 82.4 bits (202), Expect = 3e-13
Identities = 56/235 (23%), Positives = 103/235 (43%)
Frame = +3
Query: 372 KQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRG 551
K+ G++ YN L + +F A V E G F IL++ A R
Sbjct: 238 KKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRI 297
Query: 552 LRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMIL 731
+ + ++M+ KP VF Y ++ LV ++D ++ V+ + K D + + M Y L
Sbjct: 298 EEMLEILQRMRANLCKPDVFAYTAMIKTLVSEGNMDASLQVWDEMKRDEIKPDVMAYGTL 357
Query: 732 IKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRI 911
+ GLC+ GR++ + L +M++ D Y +++ +AEG + +W++++
Sbjct: 358 VTGLCRDGRVERGYELFMEMKEKQILIDREIYRVLIEGFVAEGKVRSACNLWEDLVDSGY 417
Query: 912 DPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRV 1076
D+ Y ++ LC N+VD D ++ AYVV R+
Sbjct: 418 IADLGIYNAVIKGLCSVNQVDKAYKLFQIAIDEELEPDFETLSPILVAYVVMNRL 472
>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487951|gb|AES69154.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 767
Score = 439 bits (1130), Expect = e-121
Identities = 224/364 (61%), Positives = 271/364 (74%), Gaps = 4/364 (1%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPSAASDEPFDLRKWDPE--DESNLKLPYVKDPSERFF 179
NRPTVRGGLFSNR+T+ P K S F ++KWDP + N P E F
Sbjct: 24 NRPTVRGGLFSNRKTLTPPK--PKSTKPTNSFQIQKWDPHFLSQPNSPSPSPSPSPEATF 81
Query: 180 ISAKNLSPIARYIVDAFR-THKNWNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKF 356
++ LSPIAR+I+DAFR + NW +V ELN+LRRVTP LVAEVLK +P L+ KF
Sbjct: 82 SASLRLSPIARFILDAFRKNNNNWGPPVVTELNKLRRVTPTLVAEVLKV-QTNPTLAFKF 140
Query: 357 FNWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHA 536
F+W KQKGY H+FA YNAF Y LNRANHFR ADQ+PELM QGKPPSEKQFEILIRMH+
Sbjct: 141 FHWVEKQKGYHHNFASYNAFTYCLNRANHFRAADQLPELMDAQGKPPSEKQFEILIRMHS 200
Query: 537 DAKRGLRVHYVYEKMK-KFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEEN 713
DA RGLRV++VY+KM+ KFGVKPRVFLYNRIMDALVKT HLDLA+SVY DF+EDGLVEE+
Sbjct: 201 DAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVKTGHLDLALSVYNDFREDGLVEES 260
Query: 714 MTYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDE 893
+T+MILIKGLCK G++DE+ +L +MR+ L KPDVFAYTA+V++++ EGNLDGCL VW E
Sbjct: 261 VTFMILIKGLCKGGKIDEMLEVLGRMREKLCKPDVFAYTALVRIMVKEGNLDGCLRVWKE 320
Query: 894 MLKDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGR 1073
M +DR+DPDVMAY T++ L KG RV LIDRA+YGSL+E++V +
Sbjct: 321 MKRDRVDPDVMAYGTIIGGLAKGGRVSEGYELFKEMKSKGHLIDRAIYGSLVESFVAGNK 380
Query: 1074 VGSA 1085
VG A
Sbjct: 381 VGLA 384
Score = 68.6 bits (166), Expect = 4e-09
Identities = 48/198 (24%), Positives = 89/198 (44%)
Frame = +3
Query: 381 GYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRGLRV 560
GYR D YN L N A ++ ++ +G P + L+ +A+AKR
Sbjct: 395 GYRADLGMYNNLIEGLCNLNKVEKAYKLFQVTIQEGLEPDFLSVKPLLLAYAEAKRMEEF 454
Query: 561 HYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMILIKG 740
+ EKMKK G P + ++ LV+ ++A+ ++ KE V + Y I ++
Sbjct: 455 FMLLEKMKKLGF-PVIDDLSKFFSHLVEKKGPEMALEIFTHLKEKSYVSVEI-YNIFMES 512
Query: 741 LCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRIDPD 920
L +G++++ L D+++ + +PD Y + L+ G + +++++ P
Sbjct: 513 LHLSGKVEKALSLFDEIKGSDLEPDSSTYNIAILCLVDHGQIKEACECHNKIIEMSSIPS 572
Query: 921 VMAYTTLVMALCKGNRVD 974
V AY L LC +D
Sbjct: 573 VAAYNCLAKGLCNIGEID 590
Score = 61.6 bits (148), Expect = 5e-07
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 4/194 (2%)
Frame = +3
Query: 405 YNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRGLRVHYVYEKMK 584
YN L + H A V G F ILI+ + + V +M+
Sbjct: 228 YNRIMDALVKTGHLDLALSVYNDFREDGLVEESVTFMILIKGLCKGGKIDEMLEVLGRMR 287
Query: 585 KFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMILIKGLCKAGRMD 764
+ KP VF Y ++ +VK +LD + V+ + K D + + M Y +I GL K GR+
Sbjct: 288 EKLCKPDVFAYTALVRIMVKEGNLDGCLRVWKEMKRDRVDPDVMAYGTIIGGLAKGGRVS 347
Query: 765 EVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRID----PDVMAY 932
E + L +M+ D Y ++V+ +A GN G ++LKD + D+ Y
Sbjct: 348 EGYELFKEMKSKGHLIDRAIYGSLVESFVA-GNKVGLAF---DLLKDLVSSGYRADLGMY 403
Query: 933 TTLVMALCKGNRVD 974
L+ LC N+V+
Sbjct: 404 NNLIEGLCNLNKVE 417
>ref|XP_004229293.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Solanum lycopersicum]
Length = 1256
Score = 434 bits (1115), Expect = e-119
Identities = 224/362 (61%), Positives = 261/362 (72%), Gaps = 2/362 (0%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSR--PSAASDEPFDLRKWDPEDESNLKLPYVKDPSERFF 179
+RPTV+GGLFSNRQTINP ++ PS + F L+KWDP++ S K +DPS+ FF
Sbjct: 593 HRPTVQGGLFSNRQTINPNLTTKNSPSPVTQGDFQLQKWDPDEVSGQKS---RDPSQEFF 649
Query: 180 ISAKNLSPIARYIVDAFRTHKNWNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKFF 359
A+ LSPIARYIVD+FR H W A L+A+LN LRRVTPKLV EVLK PN+DP++SSKFF
Sbjct: 650 SLAQRLSPIARYIVDSFRKHGKWGAPLLADLNTLRRVTPKLVTEVLKHPNLDPKISSKFF 709
Query: 360 NWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHAD 539
WAGKQKGYRHDF+CYNAFAY LNRAN FR ADQVPELMHMQGKPPSEKQFEILIRMH D
Sbjct: 710 YWAGKQKGYRHDFSCYNAFAYGLNRANQFRTADQVPELMHMQGKPPSEKQFEILIRMHGD 769
Query: 540 AKRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMT 719
A RGLRV+YVYEKMKKFGVKPRVFLYNRIMDALVKT+HLDLAMSVY DFK+DGLVEE++T
Sbjct: 770 ANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDALVKTNHLDLAMSVYDDFKKDGLVEESIT 829
Query: 720 YMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEML 899
+MILIKGLCK GRMDEVF + +M+++ +PDV AY
Sbjct: 830 FMILIKGLCKFGRMDEVFEVWKEMQQDAVEPDVIAY------------------------ 865
Query: 900 KDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRVG 1079
+T + LCK N+VD LIDR +YGSLIE++V G+VG
Sbjct: 866 -----------STFIAGLCKNNQVDKGYELFKEMKQKKILIDRGIYGSLIESFVASGKVG 914
Query: 1080 SA 1085
A
Sbjct: 915 LA 916
>ref|XP_006482966.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Citrus sinensis]
Length = 721
Score = 430 bits (1105), Expect = e-118
Identities = 226/363 (62%), Positives = 274/363 (75%), Gaps = 3/363 (0%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTI-NPKKFSRPSAASDEPFDLRKWDPEDESNLKLPYVKDPSE-RFF 179
NRPTV GG FSNRQ++ NP S P + +PF+++KWDP N K PS+ + F
Sbjct: 24 NRPTVYGGFFSNRQSLRNPNSTSEPHQS--QPFNVQKWDPHYLPNQKTQ--SPPSDPKTF 79
Query: 180 ISAKNLSPIARYIVDAFRTHK-NWNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKF 356
++LSPIAR+I DAFR ++ +W +V EL++LRRVTP LVAEVLK N +P L+SKF
Sbjct: 80 QLQRHLSPIARFITDAFRKNQFHWGPRVVTELSKLRRVTPDLVAEVLKVEN-NPTLASKF 138
Query: 357 FNWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHA 536
F+WAGKQKGY+H+FA YNA AY L+R N FR ADQVPELM QGKPP+EKQFEILIRMHA
Sbjct: 139 FHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGKPPTEKQFEILIRMHA 198
Query: 537 DAKRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENM 716
D RGLRV +VY+KMKKFG+ PRVFLYN+IMDALVKT+ LDLA+SVY +FK GLVEE++
Sbjct: 199 DCNRGLRVFHVYQKMKKFGILPRVFLYNKIMDALVKTNCLDLALSVYEEFKGHGLVEESV 258
Query: 717 TYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEM 896
TYMILIKGLCKAGR+ E+ +L+KMR+NL KPDVFAYTAM++VL AE NLD CL VW+EM
Sbjct: 259 TYMILIKGLCKAGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEM 318
Query: 897 LKDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRV 1076
KD ++ DVMAY TL+M LCKG RV LIDRA+YG LIE V +G+V
Sbjct: 319 KKDLVEADVMAYVTLIMGLCKGGRVVRGYELFREMKENGILIDRAIYGVLIEGLVGEGKV 378
Query: 1077 GSA 1085
G A
Sbjct: 379 GKA 381
Score = 72.0 bits (175), Expect = 4e-10
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Frame = +3
Query: 405 YNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRGLRVHYVYEKMK 584
YN L + N A V E G + ILI+ A R + + EKM+
Sbjct: 225 YNKIMDALVKTNCLDLALSVYEEFKGHGLVEESVTYMILIKGLCKAGRIAEMLEILEKMR 284
Query: 585 KFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMILIKGLCKAGRMD 764
+ KP VF Y ++ L +LD + V+ + K+D + + M Y+ LI GLCK GR+
Sbjct: 285 RNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVV 344
Query: 765 EVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRID----PDVMAY 932
+ L +M++N D Y +++ L+ EG + ++LKD +D D+ Y
Sbjct: 345 RGYELFREMKENGILIDRAIYGVLIEGLVGEGKVGKAC----DLLKDLVDSGYRADLGIY 400
Query: 933 TTLVMALCKGNRVD 974
+++ LC+ + D
Sbjct: 401 NSIIGGLCRVKQFD 414
>ref|XP_004494981.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Cicer arietinum]
Length = 720
Score = 430 bits (1105), Expect = e-118
Identities = 221/363 (60%), Positives = 269/363 (74%), Gaps = 3/363 (0%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPSAASDEPFDLRKWDPEDESNLK-LPYVKDPSERFFI 182
NRPTVRGGLFSNRQT+ P K S + PF+++KWDP S P SE F
Sbjct: 24 NRPTVRGGLFSNRQTLTPPK----SKTTSRPFEIQKWDPHFLSQQNPSPPPSPSSEASFS 79
Query: 183 SAKNLSPIARYIVDAFRTHK-NWNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKFF 359
+ LSPIAR+IVDAFR + W ++ ELN+LRRV P LVAEVLK +P L+ KFF
Sbjct: 80 PSLRLSPIARFIVDAFRKNSYKWGPSVITELNKLRRVPPNLVAEVLKV-QTNPTLAFKFF 138
Query: 360 NWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHAD 539
+W QKGY H+FA +NAFAY LNRANHF ADQ+PELM QGKPPSEKQFEILIRMH+D
Sbjct: 139 HWVENQKGYHHNFASFNAFAYCLNRANHFHAADQLPELMDAQGKPPSEKQFEILIRMHSD 198
Query: 540 AKRGLRVHYVYEKMK-KFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENM 716
A RGLR ++VY+KM+ KFGVKPRVFLYNRIMDALVKT HLDLA+SVY DF+EDGLVEE++
Sbjct: 199 AGRGLRAYHVYDKMRNKFGVKPRVFLYNRIMDALVKTRHLDLALSVYNDFREDGLVEESV 258
Query: 717 TYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEM 896
T+M+L+KGLCKAGR+ E+ +L +MR+ L KPDVFAYTA+V++++AEGNLDGCL VW+EM
Sbjct: 259 TFMVLVKGLCKAGRIGEMLEVLGRMREKLYKPDVFAYTALVRIMVAEGNLDGCLRVWEEM 318
Query: 897 LKDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRV 1076
+D + PDVMAY T++ L K RV LIDRA+YGSLIE++VV +V
Sbjct: 319 KRDGVVPDVMAYDTIIGGLAKEGRVKEGYELFKEMKSKGHLIDRAIYGSLIESFVVGNKV 378
Query: 1077 GSA 1085
G A
Sbjct: 379 GLA 381
Score = 65.1 bits (157), Expect = 5e-08
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Frame = +3
Query: 405 YNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRGLRVHYVYEKMK 584
YN L + H A V G F +L++ A R + V +M+
Sbjct: 225 YNRIMDALVKTRHLDLALSVYNDFREDGLVEESVTFMVLVKGLCKAGRIGEMLEVLGRMR 284
Query: 585 KFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMILIKGLCKAGRMD 764
+ KP VF Y ++ +V +LD + V+ + K DG+V + M Y +I GL K GR+
Sbjct: 285 EKLYKPDVFAYTALVRIMVAEGNLDGCLRVWEEMKRDGVVPDVMAYDTIIGGLAKEGRVK 344
Query: 765 EVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRID----PDVMAY 932
E + L +M+ D Y ++++ + GN G ++LKD ++ D+ Y
Sbjct: 345 EGYELFKEMKSKGHLIDRAIYGSLIESFVV-GNKVGLAF---DLLKDLVNSGYRADLGIY 400
Query: 933 TTLVMALCKGNRVD 974
L+ LC N+V+
Sbjct: 401 NNLIKGLCNLNKVE 414
>ref|XP_007008770.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508725683|gb|EOY17580.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 716
Score = 429 bits (1104), Expect = e-118
Identities = 227/362 (62%), Positives = 268/362 (74%), Gaps = 2/362 (0%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTIN-PKKFSRPSAASDEPFDLRKWDPEDESNLKLPYVKDPSERFFI 182
NRP V GGLFSNRQ + P +PS PFDLRKWDP S P PS
Sbjct: 25 NRPVVYGGLFSNRQILKTPPTPPQPSP----PFDLRKWDPYYLSQNPSP----PSTPNPY 76
Query: 183 SAKNLSPIARYIVDAFRTHK-NWNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKFF 359
+ LSPIAR+IVDAFR ++ W +V ELN+LRRVT LVAEVLK N DP L+SKFF
Sbjct: 77 QNRKLSPIARFIVDAFRKNQYTWGPTVVFELNKLRRVTASLVAEVLKVEN-DPVLASKFF 135
Query: 360 NWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHAD 539
+WAGKQKG++H+FA YNA AY LNR FR ADQ+PELM QGK P+EKQFEILIRMHAD
Sbjct: 136 HWAGKQKGFKHNFASYNALAYCLNRNGRFRAADQLPELMDSQGKQPTEKQFEILIRMHAD 195
Query: 540 AKRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMT 719
RG RV+YVY+KMK FG+KPRVFLYNRIMDALVKT +LDLA+SVY DF+ DGLVEE++T
Sbjct: 196 NNRGQRVYYVYQKMKNFGIKPRVFLYNRIMDALVKTGYLDLALSVYEDFRGDGLVEESIT 255
Query: 720 YMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEML 899
+MILIKGLCKAGR++E+ +L +MR+ L KPDVFAYTAMV++L++E NLDGCL+VW+EM
Sbjct: 256 FMILIKGLCKAGRIEEMLEVLGRMREKLCKPDVFAYTAMVRILVSEKNLDGCLLVWEEME 315
Query: 900 KDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRVG 1079
+D ++PDVMAY TLV LCKG RV LIDRA YG LIE +V DG+VG
Sbjct: 316 RDGVEPDVMAYVTLVTGLCKGGRVQRGYELFREMKDKGILIDRATYGVLIEGFVKDGKVG 375
Query: 1080 SA 1085
SA
Sbjct: 376 SA 377
Score = 70.9 bits (172), Expect = 9e-10
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 4/205 (1%)
Frame = +3
Query: 372 KQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRG 551
K G + YN L + + A V E G F ILI+ A R
Sbjct: 210 KNFGIKPRVFLYNRIMDALVKTGYLDLALSVYEDFRGDGLVEESITFMILIKGLCKAGRI 269
Query: 552 LRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMIL 731
+ V +M++ KP VF Y ++ LV +LD + V+ + + DG+ + M Y+ L
Sbjct: 270 EEMLEVLGRMREKLCKPDVFAYTAMVRILVSEKNLDGCLLVWEEMERDGVEPDVMAYVTL 329
Query: 732 IKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRI 911
+ GLCK GR+ + L +M+ D Y +++ + +G + ++LKD +
Sbjct: 330 VTGLCKGGRVQRGYELFREMKDKGILIDRATYGVLIEGFVKDGKVGSAC----DLLKDLV 385
Query: 912 D----PDVMAYTTLVMALCKGNRVD 974
D D+ Y +L+ LC RVD
Sbjct: 386 DSGYRADLGIYNSLIEGLCDARRVD 410
>ref|XP_006605814.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
isoform X2 [Glycine max] gi|571565751|ref|XP_003555182.2|
PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like isoform X1 [Glycine max]
Length = 764
Score = 427 bits (1099), Expect = e-117
Identities = 217/360 (60%), Positives = 272/360 (75%), Gaps = 3/360 (0%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPSAASDEPFDLRKWDPEDESNLKLPYVKDPSERFFIS 185
NRPTVRGGLFSNRQT+NP S+P + +PF+++ WDP SN +PS S
Sbjct: 70 NRPTVRGGLFSNRQTLNPNP-SQPKPTT-KPFNIKNWDPHFLSNPN----SNPSPSTLSS 123
Query: 186 AK-NLSPIARYIVDAFRTHKN-WNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKFF 359
A LSPIAR+IVDAFR + N W + AEL++LRR+TP LVAEVLK + L+SKFF
Sbjct: 124 ASLRLSPIARFIVDAFRRNDNKWCPNVAAELSKLRRITPNLVAEVLKV-QTNHTLASKFF 182
Query: 360 NWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHAD 539
+WAG Q+GY H+FA YNA AY LNR + FR ADQ+PELM QGKPPSEKQFEILIRMH+D
Sbjct: 183 HWAGSQRGYHHNFASYNALAYCLNRHHQFRAADQLPELMESQGKPPSEKQFEILIRMHSD 242
Query: 540 AKRGLRVHYVYEKMK-KFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENM 716
A RGLRV++VYEKM+ KFGVKPRVFLYNR+MDALV+T HLDLA+SVY D KEDGLVEE++
Sbjct: 243 ANRGLRVYHVYEKMRNKFGVKPRVFLYNRVMDALVRTGHLDLALSVYDDLKEDGLVEESV 302
Query: 717 TYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEM 896
T+M+L+KGLCK GR+DE+ +L +MR+ L KPDVFAYTA+VK+L+ GNLD CL VW+EM
Sbjct: 303 TFMVLVKGLCKCGRIDEMLEVLGRMRERLCKPDVFAYTALVKILVPAGNLDACLRVWEEM 362
Query: 897 LKDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRV 1076
+DR++PDV AY T+++ L KG RV L+DR +YG+L+EA+V +G+V
Sbjct: 363 KRDRVEPDVKAYATMIVGLAKGGRVQEGYELFREMKGKGCLVDRVIYGALVEAFVAEGKV 422
Score = 70.1 bits (170), Expect = 2e-09
Identities = 50/189 (26%), Positives = 83/189 (43%)
Frame = +3
Query: 405 YNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRGLRVHYVYEKMK 584
YN L R H A V + + G F +L++ R + V +M+
Sbjct: 269 YNRVMDALVRTGHLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVLGRMR 328
Query: 585 KFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMILIKGLCKAGRMD 764
+ KP VF Y ++ LV +LD + V+ + K D + + Y +I GL K GR+
Sbjct: 329 ERLCKPDVFAYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGLAKGGRVQ 388
Query: 765 EVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRIDPDVMAYTTLV 944
E + L +M+ D Y A+V+ +AEG ++ + +++ D+ Y L+
Sbjct: 389 EGYELFREMKGKGCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLGIYICLI 448
Query: 945 MALCKGNRV 971
LC NRV
Sbjct: 449 EGLCNLNRV 457
Score = 64.7 bits (156), Expect = 6e-08
Identities = 50/198 (25%), Positives = 86/198 (43%)
Frame = +3
Query: 381 GYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRGLRV 560
GYR D Y L N + A ++ +L +G P + L+ +A+A R
Sbjct: 436 GYRADLGIYICLIEGLCNLNRVQKAYKLFQLTVREGLEPDFLTVKPLLVAYAEANRMEEF 495
Query: 561 HYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMILIKG 740
+ E+M+K G P + ++ LV+ +A+ + KE G V + Y I +
Sbjct: 496 CKLLEQMQKLGF-PVIADLSKFFSVLVEKKGPIMALETFGQLKEKGHVSVEI-YNIFMDS 553
Query: 741 LCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRIDPD 920
L K G + + L D+M+ KPD F Y + L+ G + + +++ P
Sbjct: 554 LHKIGEVKKALSLFDEMKGLSLKPDSFTYCTAILCLVDLGEIKEACACHNRIIEMSCIPS 613
Query: 921 VMAYTTLVMALCKGNRVD 974
V AY++L LC+ +D
Sbjct: 614 VAAYSSLTKGLCQIGEID 631
>ref|XP_006438906.1| hypothetical protein CICLE_v10030824mg [Citrus clementina]
gi|557541102|gb|ESR52146.1| hypothetical protein
CICLE_v10030824mg [Citrus clementina]
Length = 721
Score = 427 bits (1097), Expect = e-117
Identities = 227/365 (62%), Positives = 273/365 (74%), Gaps = 5/365 (1%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTI-NPKKFSRPSAASDEPFDLRKWDPEDESNLKLPYVKDPSE-RFF 179
NRPTV GG FSNRQ++ NP S P + +PF+++KWDP + K PS+ + F
Sbjct: 24 NRPTVYGGFFSNRQSLRNPNSTSEPHQS--QPFNVQKWDPHYLPSQKTQ--SPPSDPKTF 79
Query: 180 ISAKNLSPIARYIVDAFRTHKN---WNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSS 350
++LSPIAR+I DAF HKN W +V EL++LRRVTP LVAEVLK N +P L+S
Sbjct: 80 QLQRHLSPIARFITDAF--HKNQFHWGPRVVTELSKLRRVTPDLVAEVLKVEN-NPTLAS 136
Query: 351 KFFNWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRM 530
KFF+WAGKQKGY+H+FA YNA AY L+R N FR ADQVPELM QGKPP+EKQFEILIRM
Sbjct: 137 KFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGKPPTEKQFEILIRM 196
Query: 531 HADAKRGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEE 710
HAD RGLRV +VY+KMKKFG+ PRVFLYN+IMDALVKT+ LDLA+SVY +FK GLVEE
Sbjct: 197 HADCNRGLRVFHVYQKMKKFGILPRVFLYNKIMDALVKTNCLDLALSVYEEFKGHGLVEE 256
Query: 711 NMTYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWD 890
++TYMILIKGLCKAGR+ E+ +L+KMR+NL KPDVFAYTAM++VL AE NLD CL VW+
Sbjct: 257 SVTYMILIKGLCKAGRIAEMLEILEKMRRNLCKPDVFAYTAMIRVLAAERNLDACLRVWE 316
Query: 891 EMLKDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDG 1070
EM KD ++ DVMAY TL+M LCKG RV LIDRA+YG LIE V +G
Sbjct: 317 EMKKDLVEADVMAYVTLIMGLCKGGRVVRGYKLFREMKENGILIDRAIYGVLIEGLVGEG 376
Query: 1071 RVGSA 1085
+VG A
Sbjct: 377 KVGKA 381
Score = 72.8 bits (177), Expect = 2e-10
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 4/194 (2%)
Frame = +3
Query: 405 YNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRGLRVHYVYEKMK 584
YN L + N A V E G + ILI+ A R + + EKM+
Sbjct: 225 YNKIMDALVKTNCLDLALSVYEEFKGHGLVEESVTYMILIKGLCKAGRIAEMLEILEKMR 284
Query: 585 KFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMILIKGLCKAGRMD 764
+ KP VF Y ++ L +LD + V+ + K+D + + M Y+ LI GLCK GR+
Sbjct: 285 RNLCKPDVFAYTAMIRVLAAERNLDACLRVWEEMKKDLVEADVMAYVTLIMGLCKGGRVV 344
Query: 765 EVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRID----PDVMAY 932
++L +M++N D Y +++ L+ EG + ++LKD +D D+ Y
Sbjct: 345 RGYKLFREMKENGILIDRAIYGVLIEGLVGEGKVGKAC----DLLKDLVDSGYRADLGIY 400
Query: 933 TTLVMALCKGNRVD 974
+++ LC+ + D
Sbjct: 401 NSIIGGLCRVKQFD 414
>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Vitis vinifera]
Length = 1294
Score = 422 bits (1086), Expect = e-116
Identities = 223/360 (61%), Positives = 256/360 (71%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPSAASDEPFDLRKWDPEDESNLKLPYVKDPSERFFIS 185
NRPTV GGLFSNR T+NPK + + + F+L+ WDP+ L +P K P ERFF
Sbjct: 564 NRPTVHGGLFSNRTTLNPKPPTLQNPTTH--FNLQNWDPDSPKALAIPPSKTPCERFFDI 621
Query: 186 AKNLSPIARYIVDAFRTHKNWNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKFFNW 365
AKNLSPIARYI D+FR H+NW +VA+LN+LRRVTP LVAEVLK DP + SKFF+W
Sbjct: 622 AKNLSPIARYICDSFRKHRNWGPPVVADLNKLRRVTPVLVAEVLKV-QTDPVICSKFFHW 680
Query: 366 AGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAK 545
AGKQKGY+H+FA YNAFAY LNR+N FR ADQVPELM+MQGKPPSEKQFEILIRMH DA
Sbjct: 681 AGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQFEILIRMHIDAN 740
Query: 546 RGLRVHYVYEKMKKFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYM 725
RGLRV+YVYEKMKKFG+KPRVFLYNRIMD LVKT HLDLAMSVY DFKEDGLVEE++TYM
Sbjct: 741 RGLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYM 800
Query: 726 ILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKD 905
IL+KGLCKAGR+DEV + ++MRK+ +PDV AY
Sbjct: 801 ILVKGLCKAGRIDEVLEVWEEMRKDKVEPDVMAY-------------------------- 834
Query: 906 RIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGRVGSA 1085
TTLV ALC GNRV LIDRA+YGSLIE +VV+ RVGSA
Sbjct: 835 ---------TTLVAALCNGNRVGEGFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSA 885
>ref|XP_004515007.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Cicer arietinum]
Length = 720
Score = 421 bits (1081), Expect = e-115
Identities = 218/364 (59%), Positives = 267/364 (73%), Gaps = 4/364 (1%)
Frame = +3
Query: 6 NRPTVRGGLFSNRQTINPKKFSRPSAASDEPFDLRKWDPE--DESNLKLPYVKDPSERFF 179
NRPTVRGGLFSNRQT+ P K P S PF+++KWDP + N P P+ F
Sbjct: 24 NRPTVRGGLFSNRQTLTPPK---PKTTS-RPFEIQKWDPHFLSQQNPSPPPSPSPAASFS 79
Query: 180 ISAKNLSPIARYIVDAFRTHK-NWNAELVAELNRLRRVTPKLVAEVLKFPNVDPRLSSKF 356
S + LSPI R+IVDAFR + W ++ EL++ RRV P LVAEVLK +P ++ KF
Sbjct: 80 ASLR-LSPIVRFIVDAFRKNGYKWGPSVITELSKFRRVPPNLVAEVLKV-QTNPTIAFKF 137
Query: 357 FNWAGKQKGYRHDFACYNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHA 536
F W QKGY H+FA +NAFAY LNRANHF ADQ+PELM QGKPPSEKQFEILIRMH+
Sbjct: 138 FRWVENQKGYHHNFASFNAFAYCLNRANHFHAADQLPELMDAQGKPPSEKQFEILIRMHS 197
Query: 537 DAKRGLRVHYVYEKMK-KFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEEN 713
DA RGLRV++VY+KM+ KFGVKPRVFLYNRIMDALVKT HLDLA+SVY DF+EDGLVEE+
Sbjct: 198 DAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVKTGHLDLALSVYNDFREDGLVEES 257
Query: 714 MTYMILIKGLCKAGRMDEVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDE 893
+TYM+L+KGLCKAGR+ E+ +L +MR+ L KPDV AYTA+V++++AEGNLDGCL VW+E
Sbjct: 258 VTYMVLVKGLCKAGRIGEMLEVLGRMREKLCKPDVCAYTALVRIMVAEGNLDGCLRVWEE 317
Query: 894 MLKDRIDPDVMAYTTLVMALCKGNRVDXXXXXXXXXXXXXXLIDRAVYGSLIEAYVVDGR 1073
M +D + PDVMAY T++ L K RV LIDRA+YGSLIE++V +
Sbjct: 318 MKRDGVVPDVMAYGTVIGGLAKEGRVKEGYELFKEMKSKGHLIDRAIYGSLIESFVAGNK 377
Query: 1074 VGSA 1085
VG A
Sbjct: 378 VGLA 381
Score = 60.5 bits (145), Expect = 1e-06
Identities = 45/190 (23%), Positives = 82/190 (43%)
Frame = +3
Query: 405 YNAFAYFLNRANHFRDADQVPELMHMQGKPPSEKQFEILIRMHADAKRGLRVHYVYEKMK 584
YN L + H A V G + +L++ A R + V +M+
Sbjct: 225 YNRIMDALVKTGHLDLALSVYNDFREDGLVEESVTYMVLVKGLCKAGRIGEMLEVLGRMR 284
Query: 585 KFGVKPRVFLYNRIMDALVKTDHLDLAMSVYIDFKEDGLVEENMTYMILIKGLCKAGRMD 764
+ KP V Y ++ +V +LD + V+ + K DG+V + M Y +I GL K GR+
Sbjct: 285 EKLCKPDVCAYTALVRIMVAEGNLDGCLRVWEEMKRDGVVPDVMAYGTVIGGLAKEGRVK 344
Query: 765 EVFRLLDKMRKNLSKPDVFAYTAMVKVLIAEGNLDGCLMVWDEMLKDRIDPDVMAYTTLV 944
E + L +M+ D Y ++++ +A + + +++ D+ Y L+
Sbjct: 345 EGYELFKEMKSKGHLIDRAIYGSLIESFVAGNKVGLAFDLLRDLVNSGYRADLGIYNNLI 404
Query: 945 MALCKGNRVD 974
LC N+V+
Sbjct: 405 EGLCNLNKVE 414