BLASTX nr result

ID: Mentha24_contig00016949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00016949
         (360 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007042377.1| RNA-binding protein 47A [Theobroma cacao] gi...    58   2e-06
ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP...    57   4e-06
ref|XP_004153627.1| PREDICTED: polyadenylate-binding protein RBP...    57   4e-06
ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP...    57   4e-06
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...    57   4e-06
ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP...    56   5e-06

>ref|XP_007042377.1| RNA-binding protein 47A [Theobroma cacao]
           gi|508706312|gb|EOX98208.1| RNA-binding protein 47A
           [Theobroma cacao]
          Length = 436

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/35 (80%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   AEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGD 107
           AE+AI  LNGT IGKQ VRLSWGRSL NK QWRGD
Sbjct: 361 AEDAIQSLNGTTIGKQTVRLSWGRSLGNK-QWRGD 394


>ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
           sativus]
          Length = 437

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/35 (80%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   AEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGD 107
           AE+AI  LNGTVIGKQ VRLSWGRS  NK QWRGD
Sbjct: 359 AEDAIQGLNGTVIGKQTVRLSWGRSTGNK-QWRGD 392


>ref|XP_004153627.1| PREDICTED: polyadenylate-binding protein RBP47C'-like, partial
           [Cucumis sativus]
          Length = 81

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/35 (80%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   AEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGD 107
           AE+AI  LNGTVIGKQ VRLSWGRS  NK QWRGD
Sbjct: 3   AEDAIQGLNGTVIGKQTVRLSWGRSTGNK-QWRGD 36


>ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
           sativus]
          Length = 436

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/35 (80%), Positives = 29/35 (82%)
 Frame = +3

Query: 3   AEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGD 107
           AE+AI  LNGTVIGKQ VRLSWGRS  NK QWRGD
Sbjct: 358 AEDAIQGLNGTVIGKQTVRLSWGRSTGNK-QWRGD 391


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
           gi|223550967|gb|EEF52453.1| nuclear acid binding
           protein, putative [Ricinus communis]
          Length = 443

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +3

Query: 3   AEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGDW 110
           AEEA+ KLNGTVIGKQ VRLSWGR+  NKQQ R D+
Sbjct: 360 AEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDF 395


>ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
           sativus] gi|449496017|ref|XP_004160013.1| PREDICTED:
           polyadenylate-binding protein RBP47C-like [Cucumis
           sativus]
          Length = 429

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   AEEAINKLNGTVIGKQKVRLSWGRSLNNKQQWRGDW 110
           AEEA+ KLNGTVIGKQ VRLSWGRS  NK Q+RGD+
Sbjct: 346 AEEALQKLNGTVIGKQTVRLSWGRSPTNK-QYRGDY 380


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