BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00016358
         (475 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise...   269   7e-75
gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh...   267   2e-74
gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus...   263   3e-73
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub...   253   6e-70
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...   252   8e-70
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub...   252   8e-70
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   252   8e-70
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   260   1e-69
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...   249   9e-69
gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptid...   249   9e-69
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              248   1e-68
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   248   1e-68
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...   248   6e-68
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [...   250   2e-67
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub...   240   4e-66
ref|XP_006300099.1| hypothetical protein CARUB_v10016327mg [Caps...   240   9e-66
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun...   239   3e-65
dbj|BAD43874.1| putative DNA-directed RNA polymerase subunit [Ar...   237   3e-65
emb|CAJ86030.1| B0414F07.4 [Oryza sativa Indica Group]                240   1e-64
emb|CAD41847.2| OSJNBb0079B02.6 [Oryza sativa Japonica Group]         240   1e-64

>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
          Length = 1205

 Score =  269 bits (688), Expect(2) = 7e-75
 Identities = 128/145 (88%), Positives = 135/145 (93%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            YDGRTGE ++SLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 1051 YDGRTGEALKSLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1110

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGAAANLHERLFTL DSSQMHICRKCK MANVIQRPV GG+K+RGPYCRFCE
Sbjct: 1111 MERDCLIAHGAAANLHERLFTLSDSSQMHICRKCKNMANVIQRPVFGGRKVRGPYCRFCE 1170

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            SVEDVVRVNVPYGAKLL +   + G
Sbjct: 1171 SVEDVVRVNVPYGAKLLCQELFSMG 1195



 Score = 37.4 bits (85), Expect(2) = 7e-75
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGISL F+TE+C
Sbjct: 1188 CQELFSMGISLKFDTEIC 1205


>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
          Length = 821

 Score =  267 bits (682), Expect(2) = 2e-74
 Identities = 126/145 (86%), Positives = 135/145 (93%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            YDGRTGEKVESLIFMGPTFYQRLTHMAEDK+KFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 667  YDGRTGEKVESLIFMGPTFYQRLTHMAEDKIKFRNTGPVHPLTRQPVADRKRFGGIKFGE 726

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGAAANLHERLFTL DSSQMH+CRKC+ MANVIQR V GG+KIRGPYCRFC+
Sbjct: 727  MERDCLIAHGAAANLHERLFTLSDSSQMHVCRKCQNMANVIQRSVFGGRKIRGPYCRFCD 786

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            SVEDVVR+NVPYGAKLL +   + G
Sbjct: 787  SVEDVVRLNVPYGAKLLCQELFSMG 811



 Score = 38.1 bits (87), Expect(2) = 2e-74
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +3

Query: 411 CQELFSMGISLSFETELC 464
           CQELFSMGISL F+TELC
Sbjct: 804 CQELFSMGISLKFDTELC 821


>gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus guttatus]
          Length = 1211

 Score =  263 bits (672), Expect(2) = 3e-73
 Identities = 129/147 (87%), Positives = 134/147 (91%), Gaps = 2/147 (1%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            YDGRTGEKV SLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 1055 YDGRTGEKVNSLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1114

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVS--GGKKIRGPYCRF 354
            ME DCLIAHGAAANLHERLFTL DSSQMHICRKCK MANVIQRP S  GG+KIRGP+CR 
Sbjct: 1115 MERDCLIAHGAAANLHERLFTLSDSSQMHICRKCKNMANVIQRPGSGGGGRKIRGPFCRV 1174

Query: 355  CESVEDVVRVNVPYGAKLLARSSSAWG 435
            CESVEDVVRVNVPYGAKLL +   + G
Sbjct: 1175 CESVEDVVRVNVPYGAKLLCQELFSMG 1201



 Score = 38.1 bits (87), Expect(2) = 3e-73
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGISL F+TELC
Sbjct: 1194 CQELFSMGISLKFDTELC 1211


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
            lycopersicum]
          Length = 1219

 Score =  253 bits (645), Expect(2) = 6e-70
 Identities = 122/145 (84%), Positives = 130/145 (89%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            Y+GRTGE V SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 1066 YNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1125

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGAAANLHERLFTL DSSQMHIC KCK MANVIQRPV GG K+RGP+CRFCE
Sbjct: 1126 MERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRPVPGG-KVRGPFCRFCE 1184

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            SVED+V+V VPYGAKLL +   + G
Sbjct: 1185 SVEDIVKVGVPYGAKLLCQELFSMG 1209



 Score = 37.4 bits (85), Expect(2) = 6e-70
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGISL F+TE+C
Sbjct: 1202 CQELFSMGISLKFDTEIC 1219


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score =  252 bits (644), Expect(2) = 8e-70
 Identities = 122/145 (84%), Positives = 130/145 (89%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            Y+GRTGE V SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 1064 YNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1123

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGAAANLHERLFTL DSSQMHIC KCK MANVIQR V GG K+RGP+CRFCE
Sbjct: 1124 MERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFCE 1182

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            SVED+V+VNVPYGAKLL +   + G
Sbjct: 1183 SVEDIVKVNVPYGAKLLCQELFSMG 1207



 Score = 37.4 bits (85), Expect(2) = 8e-70
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGISL F+TE+C
Sbjct: 1200 CQELFSMGISLKFDTEIC 1217


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
            lycopersicum]
          Length = 1217

 Score =  252 bits (644), Expect(2) = 8e-70
 Identities = 122/145 (84%), Positives = 130/145 (89%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            Y+GRTGE V SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 1064 YNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1123

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGAAANLHERLFTL DSSQMHIC KCK MANVIQR V GG K+RGP+CRFCE
Sbjct: 1124 MERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQGG-KVRGPFCRFCE 1182

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            SVED+V+VNVPYGAKLL +   + G
Sbjct: 1183 SVEDIVKVNVPYGAKLLCQELFSMG 1207



 Score = 37.4 bits (85), Expect(2) = 8e-70
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGISL F+TE+C
Sbjct: 1200 CQELFSMGISLKFDTEIC 1217


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  252 bits (644), Expect(2) = 8e-70
 Identities = 119/145 (82%), Positives = 131/145 (90%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            Y+GRTGE V SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 1049 YNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1108

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGA+ANLHERLFTL DSSQMHIC+KCK +ANVIQR V GG+KIRGPYCR CE
Sbjct: 1109 MERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGGRKIRGPYCRVCE 1168

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            SV+++V+VNVPYGAKLL +   + G
Sbjct: 1169 SVDEIVKVNVPYGAKLLCQELFSMG 1193



 Score = 37.4 bits (85), Expect(2) = 8e-70
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGISL FET LC
Sbjct: 1186 CQELFSMGISLKFETRLC 1203


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  260 bits (664), Expect(2) = 1e-69
 Identities = 122/145 (84%), Positives = 133/145 (91%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            Y+GRTGE + SL+FMGPTFYQRLTHM+EDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 865  YNGRTGEMIHSLVFMGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 924

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGAAANLHERLFTL DSSQMHICRKC  +ANVIQR V GG+KIRGPYCRFCE
Sbjct: 925  MERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNIANVIQRAVPGGRKIRGPYCRFCE 984

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            SVE++VRVNVPYGAKLLA+   + G
Sbjct: 985  SVEEIVRVNVPYGAKLLAQELFSMG 1009



 Score = 29.3 bits (64), Expect(2) = 1e-69
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +3

Query: 414  QELFSMGISLSFETEL 461
            QELFSMGI++ F+TEL
Sbjct: 1003 QELFSMGITMKFDTEL 1018


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score =  249 bits (635), Expect(2) = 9e-69
 Identities = 121/145 (83%), Positives = 129/145 (88%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            Y+GRTGE V SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 1066 YNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1125

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGAAANLHERLFTL DSSQMHIC KCK MANVIQR   GG KIRGP+CRFCE
Sbjct: 1126 MERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGG-KIRGPFCRFCE 1184

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            SVED+V+V+VPYGAKLL +   + G
Sbjct: 1185 SVEDIVKVDVPYGAKLLCQELFSMG 1209



 Score = 37.4 bits (85), Expect(2) = 9e-69
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGISL F+TE+C
Sbjct: 1202 CQELFSMGISLKFDTEIC 1219


>gb|ABG29322.1| DNA-directed RNA polymerase II 135 kDa polypeptide, putative
           [Solanum bulbocastanum]
          Length = 304

 Score =  249 bits (635), Expect(2) = 9e-69
 Identities = 121/145 (83%), Positives = 129/145 (88%)
 Frame = +1

Query: 1   YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
           Y+GRTGE V SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 151 YNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 210

Query: 181 ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
           ME DCLIAHGAAANLHERLFTL DSSQMHIC KCK MANVIQR   GG KIRGP+CRFCE
Sbjct: 211 MERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGG-KIRGPFCRFCE 269

Query: 361 SVEDVVRVNVPYGAKLLARSSSAWG 435
           SVED+V+V+VPYGAKLL +   + G
Sbjct: 270 SVEDIVKVDVPYGAKLLCQELFSMG 294



 Score = 37.4 bits (85), Expect(2) = 9e-69
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 411 CQELFSMGISLSFETELC 464
           CQELFSMGISL F+TE+C
Sbjct: 287 CQELFSMGISLKFDTEIC 304


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  248 bits (632), Expect(2) = 1e-68
 Identities = 114/145 (78%), Positives = 131/145 (90%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            Y+GRTGE + SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPV+DRK+FGGIKFGE
Sbjct: 1066 YNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGE 1125

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGAAANLHERLFTL DS+ MHICR+CK ++NVIQR V+GG+K+RGPYCR+CE
Sbjct: 1126 MERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCE 1185

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            S E++V+VNVPYGAKLL +   + G
Sbjct: 1186 SSEEIVKVNVPYGAKLLCQELFSMG 1210



 Score = 38.1 bits (87), Expect(2) = 1e-68
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGISL FET+LC
Sbjct: 1203 CQELFSMGISLKFETQLC 1220


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  248 bits (632), Expect(2) = 1e-68
 Identities = 114/145 (78%), Positives = 131/145 (90%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            Y+GRTGE + SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPV+DRK+FGGIKFGE
Sbjct: 1044 YNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGE 1103

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGAAANLHERLFTL DS+ MHICR+CK ++NVIQR V+GG+K+RGPYCR+CE
Sbjct: 1104 MERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCE 1163

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            S E++V+VNVPYGAKLL +   + G
Sbjct: 1164 SSEEIVKVNVPYGAKLLCQELFSMG 1188



 Score = 38.1 bits (87), Expect(2) = 1e-68
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGISL FET+LC
Sbjct: 1181 CQELFSMGISLKFETQLC 1198


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score =  248 bits (633), Expect(2) = 6e-68
 Identities = 116/145 (80%), Positives = 128/145 (88%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            YDGRTGE V SLIF+GPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 1044 YDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1103

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGAAANLHERLFTL DS QMHICRKCK +ANVIQR V GG+K+RGPYCR C+
Sbjct: 1104 MERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQRVVGGGRKVRGPYCRICD 1163

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            S +D+V+ NVPYGAKLL +   + G
Sbjct: 1164 SGDDIVKANVPYGAKLLCQELFSMG 1188



 Score = 35.4 bits (80), Expect(2) = 6e-68
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGI+L F+TE C
Sbjct: 1181 CQELFSMGITLKFDTEFC 1198


>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1181

 Score =  250 bits (638), Expect(2) = 2e-67
 Identities = 118/145 (81%), Positives = 131/145 (90%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            Y+GRTGE V SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 1027 YNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1086

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGA+ANLHERLFTL DSS+MHIC+KCK +ANVIQR V GG+KIRGPYCR CE
Sbjct: 1087 MERDCLIAHGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGGRKIRGPYCRVCE 1146

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            SV+D+V+V+VPYGAKLL +   + G
Sbjct: 1147 SVDDLVKVSVPYGAKLLCQELFSMG 1171



 Score = 31.6 bits (70), Expect(2) = 2e-67
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +3

Query: 411  CQELFSMGISLSFETEL 461
            CQELFSMGISL F+T +
Sbjct: 1164 CQELFSMGISLKFDTRV 1180


>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria
            vesca subsp. vesca]
          Length = 1201

 Score =  240 bits (612), Expect(2) = 4e-66
 Identities = 111/145 (76%), Positives = 128/145 (88%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            Y+GRTGE V  LIFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 1047 YNGRTGEMVRQLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1106

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGA+ANLHERLFTL DSS M++C+KC+  ANVI+R ++GG+KIRGPYCR C+
Sbjct: 1107 MERDCLIAHGASANLHERLFTLSDSSLMNVCQKCQNAANVIERKLTGGRKIRGPYCRVCD 1166

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            S +D+VRVNVPYGAKLL +   + G
Sbjct: 1167 SADDIVRVNVPYGAKLLCQELFSMG 1191



 Score = 37.4 bits (85), Expect(2) = 4e-66
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGISL FET LC
Sbjct: 1184 CQELFSMGISLKFETRLC 1201


>ref|XP_006300099.1| hypothetical protein CARUB_v10016327mg [Capsella rubella]
            gi|482568808|gb|EOA32997.1| hypothetical protein
            CARUB_v10016327mg [Capsella rubella]
          Length = 1161

 Score =  240 bits (613), Expect(2) = 9e-66
 Identities = 115/145 (79%), Positives = 126/145 (86%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            Y+GR+GE + SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 1007 YNGRSGEMMRSLIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1066

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGA+ANLHERLFTL DSSQMHICRKCK  ANVI+R  S G+KIRGPYCR CE
Sbjct: 1067 MERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGRKIRGPYCRVCE 1126

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            S + VVRV VPYGAKLL +   + G
Sbjct: 1127 SPDHVVRVYVPYGAKLLCQELFSMG 1151



 Score = 35.8 bits (81), Expect(2) = 9e-66
 Identities = 14/18 (77%), Positives = 18/18 (100%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGI+L+F+T+LC
Sbjct: 1144 CQELFSMGITLNFDTKLC 1161


>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
            gi|462422378|gb|EMJ26641.1| hypothetical protein
            PRUPE_ppa000410mg [Prunus persica]
          Length = 1200

 Score =  239 bits (609), Expect(2) = 3e-65
 Identities = 112/145 (77%), Positives = 127/145 (87%)
 Frame = +1

Query: 1    YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
            Y+G TG  V SLIFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 1046 YNGATGAMVRSLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 1105

Query: 181  ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
            ME DCLIAHGA+ANLHERLFTL DSSQMH+C+KCK +A VI R V+GG+KIRGP+CR C+
Sbjct: 1106 MERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVAYVILRTVAGGRKIRGPHCRICD 1165

Query: 361  SVEDVVRVNVPYGAKLLARSSSAWG 435
            S +D+VRVNVPYGAKLL +   + G
Sbjct: 1166 SADDLVRVNVPYGAKLLCQELFSMG 1190



 Score = 35.8 bits (81), Expect(2) = 3e-65
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = +3

Query: 411  CQELFSMGISLSFETELC 464
            CQELFSMGISL FET  C
Sbjct: 1183 CQELFSMGISLKFETRFC 1200


>dbj|BAD43874.1| putative DNA-directed RNA polymerase subunit [Arabidopsis thaliana]
          Length = 639

 Score =  237 bits (604), Expect(2) = 3e-65
 Identities = 113/145 (77%), Positives = 125/145 (86%)
 Frame = +1

Query: 1   YDGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGE 180
           Y+GR+GE + S+IFMGPTFYQRL HM+EDKVKFRNTGPVHPLTRQPVADRK+FGGIKFGE
Sbjct: 485 YNGRSGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGE 544

Query: 181 ME*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCE 360
           ME DCLIAHGA+ANLHERLFTL DSSQMHICRKCK  ANVI+R  S G+KIRGPYCR C 
Sbjct: 545 MERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGRKIRGPYCRVCV 604

Query: 361 SVEDVVRVNVPYGAKLLARSSSAWG 435
           S + VVRV VPYGAKLL +   + G
Sbjct: 605 SSDHVVRVYVPYGAKLLCQELFSMG 629



 Score = 37.4 bits (85), Expect(2) = 3e-65
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = +3

Query: 411 CQELFSMGISLSFETELC 464
           CQELFSMGI+L+F+TELC
Sbjct: 622 CQELFSMGITLNFDTELC 639


>emb|CAJ86030.1| B0414F07.4 [Oryza sativa Indica Group]
          Length = 1343

 Score =  240 bits (613), Expect(2) = 1e-64
 Identities = 111/144 (77%), Positives = 127/144 (88%)
 Frame = +1

Query: 4    DGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGEM 183
            +GRTGE++ SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRK+FGG+KFGEM
Sbjct: 1190 NGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEM 1249

Query: 184  E*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCES 363
            E DCL+AHGAAANLHERLF L D SQMH+C+ C+++ANVI RPV GGKKIRGPYC FC S
Sbjct: 1250 ERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFCRS 1309

Query: 364  VEDVVRVNVPYGAKLLARSSSAWG 435
             E++VR+NVPYGAKLL +   + G
Sbjct: 1310 SENIVRINVPYGAKLLYQELFSMG 1333



 Score = 32.3 bits (72), Expect(2) = 1e-64
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +3

Query: 414  QELFSMGISLSFETELC 464
            QELFSMGI L FETE+C
Sbjct: 1327 QELFSMGICLRFETEVC 1343


>emb|CAD41847.2| OSJNBb0079B02.6 [Oryza sativa Japonica Group]
          Length = 1343

 Score =  240 bits (613), Expect(2) = 1e-64
 Identities = 111/144 (77%), Positives = 127/144 (88%)
 Frame = +1

Query: 4    DGRTGEKVESLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKQFGGIKFGEM 183
            +GRTGE++ SLIFMGPTFYQRL HMAEDKVKFRNTGPVHPLTRQPVADRK+FGG+KFGEM
Sbjct: 1190 NGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEM 1249

Query: 184  E*DCLIAHGAAANLHERLFTLRDSSQMHICRKCKKMANVIQRPVSGGKKIRGPYCRFCES 363
            E DCL+AHGAAANLHERLF L D SQMH+C+ C+++ANVI RPV GGKKIRGPYC FC S
Sbjct: 1250 ERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFCRS 1309

Query: 364  VEDVVRVNVPYGAKLLARSSSAWG 435
             E++VR+NVPYGAKLL +   + G
Sbjct: 1310 SENIVRINVPYGAKLLYQELFSMG 1333



 Score = 32.3 bits (72), Expect(2) = 1e-64
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +3

Query: 414  QELFSMGISLSFETELC 464
            QELFSMGI L FETE+C
Sbjct: 1327 QELFSMGICLRFETEVC 1343