BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00016216
         (381 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44082.1| hypothetical protein MIMGU_mgv1a025818mg, partial...   105   7e-21
gb|EYU24439.1| hypothetical protein MIMGU_mgv1a016444mg [Mimulus...   105   7e-21
ref|XP_004251169.1| PREDICTED: DNA-directed RNA polymerase II su...   102   7e-20
ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II su...   101   1e-19
emb|CAN70445.1| hypothetical protein VITISV_015574 [Vitis vinifera]   101   1e-19
ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II su...    99   6e-19
gb|EYU26070.1| hypothetical protein MIMGU_mgv1a016337mg [Mimulus...    98   1e-18
ref|XP_007201425.1| hypothetical protein PRUPE_ppa013559mg [Prun...    97   2e-18
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su...    97   2e-18
ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa poly...    97   2e-18
ref|XP_006439089.1| hypothetical protein CICLE_v10033103mg [Citr...    96   5e-18
ref|XP_007131395.1| hypothetical protein PHAVU_011G010100g [Phas...    94   2e-17
gb|EPS61373.1| hypothetical protein M569_13423, partial [Genlise...    94   3e-17
ref|XP_006292069.1| hypothetical protein CARUB_v10018264mg [Caps...    93   3e-17
ref|NP_190777.1| DNA-directed RNA polymerases II, IV and V subun...    93   3e-17
ref|XP_002877842.1| ATRPB13.6 [Arabidopsis lyrata subsp. lyrata]...    93   3e-17
ref|XP_004289694.1| PREDICTED: DNA-directed RNA polymerase II su...    92   6e-17
ref|XP_006403846.1| hypothetical protein EUTSA_v10010833mg [Eutr...    92   1e-16
ref|XP_007052503.1| DNA-directed RNA polymerase II subunit RPB11...    92   1e-16
ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, ...    92   1e-16

>gb|EYU44082.1| hypothetical protein MIMGU_mgv1a025818mg, partial [Mimulus
           guttatus]
          Length = 73

 Score =  105 bits (262), Expect = 7e-21
 Identities = 49/55 (89%), Positives = 52/55 (94%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAKHVGR 167
           YKLPHPLQYKIL+RI TTSQSSPMQAYNQAINDLDKELDHLKNEFEV LA+H G+
Sbjct: 13  YKLPHPLQYKILLRIHTTSQSSPMQAYNQAINDLDKELDHLKNEFEVALARHTGK 67


>gb|EYU24439.1| hypothetical protein MIMGU_mgv1a016444mg [Mimulus guttatus]
           gi|604305261|gb|EYU24440.1| hypothetical protein
           MIMGU_mgv1a016444mg [Mimulus guttatus]
          Length = 121

 Score =  105 bits (262), Expect = 7e-21
 Identities = 49/55 (89%), Positives = 52/55 (94%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAKHVGR 167
           YKLPHPLQYKIL+RI TTSQSSPMQAYNQAINDLDKELDHLKNEFEV LA+H G+
Sbjct: 61  YKLPHPLQYKILLRIHTTSQSSPMQAYNQAINDLDKELDHLKNEFEVALARHTGK 115


>ref|XP_004251169.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Solanum lycopersicum] gi|565346226|ref|XP_006340167.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 11-like [Solanum tuberosum]
          Length = 116

 Score =  102 bits (253), Expect = 7e-20
 Identities = 48/52 (92%), Positives = 51/52 (98%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAKH 158
           YKLPHPLQYKIL+RIQTTSQSSPMQAYNQAINDLDKELDHLK++FE ELAKH
Sbjct: 61  YKLPHPLQYKILLRIQTTSQSSPMQAYNQAINDLDKELDHLKSQFEGELAKH 112


>ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Vitis
           vinifera] gi|296082163|emb|CBI21168.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAKH 158
           YKLPHPLQYKI+IRI TTSQSSPMQAYNQAINDLDKELD+LKN FEVELAKH
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFEVELAKH 112


>emb|CAN70445.1| hypothetical protein VITISV_015574 [Vitis vinifera]
          Length = 129

 Score =  101 bits (251), Expect = 1e-19
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAKH 158
           YKLPHPLQYKI+IRI TTSQSSPMQAYNQAINDLDKELD+LKN FEVELAKH
Sbjct: 74  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFEVELAKH 125


>ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           isoform 2 [Fragaria vesca subsp. vesca]
          Length = 118

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAKH 158
           YKLPHPLQYKI++RI TTSQSSPMQAYNQAINDLDKELDHLK+ FE E+AKH
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSNFEAEVAKH 112


>gb|EYU26070.1| hypothetical protein MIMGU_mgv1a016337mg [Mimulus guttatus]
           gi|604312291|gb|EYU26071.1| hypothetical protein
           MIMGU_mgv1a016337mg [Mimulus guttatus]
          Length = 125

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 47/52 (90%), Positives = 48/52 (92%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAKH 158
           YKLPHPLQYKIL+RI TTSQSSPMQAYNQAINDLDKELDHLKNEFEV L  H
Sbjct: 61  YKLPHPLQYKILLRIHTTSQSSPMQAYNQAINDLDKELDHLKNEFEVMLFLH 112


>ref|XP_007201425.1| hypothetical protein PRUPE_ppa013559mg [Prunus persica]
           gi|462396825|gb|EMJ02624.1| hypothetical protein
           PRUPE_ppa013559mg [Prunus persica]
          Length = 116

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAKH 158
           YKLPHPLQYKI++RI TTSQSSPMQAYNQAINDLDKELDHLK+ FE E+AKH
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSCFEAEVAKH 112


>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Cucumis sativus] gi|449516703|ref|XP_004165386.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB11-like [Cucumis sativus]
          Length = 116

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 45/51 (88%), Positives = 47/51 (92%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAK 155
           YKLPHPLQYKI++RI TTSQSSPMQAYNQAINDLDKELDHLKN FE E AK
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAK 111


>ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa polypeptide family protein
           [Populus trichocarpa] gi|566186802|ref|XP_006379118.1|
           hypothetical protein POPTR_0009s07520g [Populus
           trichocarpa] gi|118484276|gb|ABK94017.1| unknown
           [Populus trichocarpa] gi|222849662|gb|EEE87209.1|
           DNA-directed RNA polymerase II 13.6 kDa polypeptide
           family protein [Populus trichocarpa]
           gi|550331237|gb|ERP56915.1| hypothetical protein
           POPTR_0009s07520g [Populus trichocarpa]
          Length = 116

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 45/55 (81%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAKHVGR 167
           YKLPHPL+YKI++RI TTSQSSPMQAYNQAINDLDKELDHLKN FE ELA   G+
Sbjct: 61  YKLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAELANRPGQ 115


>ref|XP_006439089.1| hypothetical protein CICLE_v10033103mg [Citrus clementina]
           gi|568858641|ref|XP_006482856.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 11-like [Citrus
           sinensis] gi|557541285|gb|ESR52329.1| hypothetical
           protein CICLE_v10033103mg [Citrus clementina]
          Length = 116

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 45/52 (86%), Positives = 48/52 (92%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAKH 158
           YKLPHPLQYKI++RI TTSQSSPMQAYNQAINDLDKELD LK+ FE ELAKH
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDTLKSAFEAELAKH 112


>ref|XP_007131395.1| hypothetical protein PHAVU_011G010100g [Phaseolus vulgaris]
           gi|561004395|gb|ESW03389.1| hypothetical protein
           PHAVU_011G010100g [Phaseolus vulgaris]
          Length = 116

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAK 155
           YKLPHPLQYKI+IRI TTSQSSPMQAYNQ+INDLD+ELDHLKN FE E+ K
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDRELDHLKNAFEAEMLK 111


>gb|EPS61373.1| hypothetical protein M569_13423, partial [Genlisea aurea]
          Length = 116

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAKH 158
           YKLPHPLQYKI++RI TTSQSSPMQAYNQAINDLDKELD LK +FE ELA H
Sbjct: 64  YKLPHPLQYKIILRIHTTSQSSPMQAYNQAINDLDKELDFLKTQFEAELAIH 115


>ref|XP_006292069.1| hypothetical protein CARUB_v10018264mg [Capsella rubella]
           gi|482560776|gb|EOA24967.1| hypothetical protein
           CARUB_v10018264mg [Capsella rubella]
          Length = 116

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/51 (82%), Positives = 49/51 (96%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAK 155
           Y+LPHPL+YKI++RI TTSQSSPMQAYNQAINDLDKELD+LKN+FE E+AK
Sbjct: 61  YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAK 111


>ref|NP_190777.1| DNA-directed RNA polymerases II, IV and V subunit 11 [Arabidopsis
           thaliana] gi|3219858|sp|Q38859.1|NRPBB_ARATH RecName:
           Full=DNA-directed RNA polymerases II, IV and V subunit
           11; AltName: Full=DNA-directed RNA polymerase II 13.6
           kDa polypeptide; AltName: Full=DNA-directed RNA
           polymerase II subunit J; AltName: Full=DNA-directed RNA
           polymerase II subunit RPB11; Short=RNA polymerase II
           subunit B11 gi|881501|gb|AAB02849.1| RNA polymerase II
           13.6 kDa subunit [Arabidopsis thaliana]
           gi|4678938|emb|CAB41329.1| DNA-directed RNA polymerase
           II 13.6K chain [Arabidopsis thaliana]
           gi|29029080|gb|AAO64919.1| At3g52090 [Arabidopsis
           thaliana] gi|332645368|gb|AEE78889.1| non-catalytic
           subunit of DNA-dependent RNA polymerases II, IV and V
           [Arabidopsis thaliana]
          Length = 116

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/51 (82%), Positives = 49/51 (96%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAK 155
           Y+LPHPL+YKI++RI TTSQSSPMQAYNQAINDLDKELD+LKN+FE E+AK
Sbjct: 61  YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAK 111


>ref|XP_002877842.1| ATRPB13.6 [Arabidopsis lyrata subsp. lyrata]
           gi|297323680|gb|EFH54101.1| ATRPB13.6 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 116

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/51 (82%), Positives = 49/51 (96%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAK 155
           Y+LPHPL+YKI++RI TTSQSSPMQAYNQAINDLDKELD+LKN+FE E+AK
Sbjct: 61  YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAK 111


>ref|XP_004289694.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           isoform 1 [Fragaria vesca subsp. vesca]
          Length = 134

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 43/49 (87%), Positives = 46/49 (93%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVEL 149
           YKLPHPLQYKI++RI TTSQSSPMQAYNQAINDLDKELDHLK+ FEV L
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSNFEVML 109


>ref|XP_006403846.1| hypothetical protein EUTSA_v10010833mg [Eutrema salsugineum]
           gi|557104965|gb|ESQ45299.1| hypothetical protein
           EUTSA_v10010833mg [Eutrema salsugineum]
          Length = 116

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 41/51 (80%), Positives = 49/51 (96%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAK 155
           Y+LPHPL+YKI++RI TTSQSSPMQAYNQAINDLDKEL++LKN+FE E+AK
Sbjct: 61  YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELEYLKNQFEAEVAK 111


>ref|XP_007052503.1| DNA-directed RNA polymerase II subunit RPB11 [Theobroma cacao]
           gi|508704764|gb|EOX96660.1| DNA-directed RNA polymerase
           II subunit RPB11 [Theobroma cacao]
          Length = 169

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFE 140
           YKLPHPLQYKI++RI TTSQSSPMQAYNQAINDLDKELDHLKN FE
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE 106


>ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11
           [Glycine max]
          Length = 116

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 41/51 (80%), Positives = 47/51 (92%)
 Frame = +3

Query: 3   YKLPHPLQYKILIRIQTTSQSSPMQAYNQAINDLDKELDHLKNEFEVELAK 155
           YKLPHPLQYKI++RI TTSQSSPMQAYNQ+INDLD+ELDHLK+ FE E+ K
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKSAFEAEMLK 111