BLASTX nr result
ID: Mentha24_contig00014181
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00014181
(483 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007049273.1| RNA-binding family protein isoform 3 [Theobr... 69 5e-10
ref|XP_007049271.1| HnRNP isoform 1 [Theobroma cacao] gi|5087015... 69 5e-10
ref|XP_007049272.1| RNA-binding family protein isoform 2 [Theobr... 66 4e-09
ref|XP_002320502.2| hypothetical protein POPTR_0014s15970g [Popu... 65 1e-08
ref|XP_004293449.1| PREDICTED: uncharacterized protein LOC101314... 64 3e-08
ref|XP_006447738.1| hypothetical protein CICLE_v10015084mg [Citr... 63 4e-08
emb|CBI28407.3| unnamed protein product [Vitis vinifera] 63 4e-08
ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246... 63 4e-08
ref|XP_007215320.1| hypothetical protein PRUPE_ppa005132mg [Prun... 62 6e-08
ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C,... 62 6e-08
ref|XP_006467314.1| PREDICTED: heterogeneous nuclear ribonucleop... 61 1e-07
ref|XP_006449887.1| hypothetical protein CICLE_v10015098mg [Citr... 61 1e-07
ref|XP_002308799.1| hypothetical protein POPTR_0006s01680g [Popu... 61 2e-07
ref|XP_007215319.1| hypothetical protein PRUPE_ppa005119mg [Prun... 60 3e-07
ref|XP_007026294.1| RNA-binding family protein isoform 4 [Theobr... 60 4e-07
ref|XP_007026291.1| RNA-binding family protein isoform 1 [Theobr... 60 4e-07
ref|XP_004293446.1| PREDICTED: uncharacterized protein LOC101313... 59 5e-07
ref|XP_006836782.1| hypothetical protein AMTR_s00088p00174110 [A... 59 7e-07
ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C,... 59 9e-07
ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267... 57 3e-06
>ref|XP_007049273.1| RNA-binding family protein isoform 3 [Theobroma cacao]
gi|508701534|gb|EOX93430.1| RNA-binding family protein
isoform 3 [Theobroma cacao]
Length = 390
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/64 (56%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
Frame = -2
Query: 326 FGNLYGG-SFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSN 159
F +LYGG S GD W +ST E + SFGYG GSAT++V+ +++PGY GGYSV +SN
Sbjct: 326 FADLYGGASVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQSN 385
Query: 158 RGIA 147
RGIA
Sbjct: 386 RGIA 389
>ref|XP_007049271.1| HnRNP isoform 1 [Theobroma cacao] gi|508701532|gb|EOX93428.1| HnRNP
isoform 1 [Theobroma cacao]
Length = 477
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/64 (56%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
Frame = -2
Query: 326 FGNLYGG-SFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSN 159
F +LYGG S GD W +ST E + SFGYG GSAT++V+ +++PGY GGYSV +SN
Sbjct: 413 FADLYGGASVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQSN 472
Query: 158 RGIA 147
RGIA
Sbjct: 473 RGIA 476
>ref|XP_007049272.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508701533|gb|EOX93429.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 391
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 4/62 (6%)
Frame = -2
Query: 326 FGNLYGG-SFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSN 159
F +LYGG S GD W +ST E + SFGYG GSAT++V+ +++PGY GGYSV +SN
Sbjct: 326 FADLYGGASVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQSN 385
Query: 158 RG 153
RG
Sbjct: 386 RG 387
>ref|XP_002320502.2| hypothetical protein POPTR_0014s15970g [Populus trichocarpa]
gi|550324302|gb|EEE98817.2| hypothetical protein
POPTR_0014s15970g [Populus trichocarpa]
Length = 479
Score = 65.1 bits (157), Expect = 1e-08
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Frame = -2
Query: 326 FGNLYGGSFN-GDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSN 159
F +LYGGS + GD W SS E + SFGYG G+AT++V +T+PGY GGYSV +SN
Sbjct: 415 FADLYGGSSDYGDPAWQSSNSERDGSVSFGYGLGNATSDVPVKTSPGYVGGYSVNKRQSN 474
Query: 158 RG 153
RG
Sbjct: 475 RG 476
>ref|XP_004293449.1| PREDICTED: uncharacterized protein LOC101314729 [Fragaria vesca
subsp. vesca]
Length = 471
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Frame = -2
Query: 326 FGNLYG-GSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSN 159
F + Y GS GD W SS E + P FGYG GSA ++V+++++PGY GGYSV +SN
Sbjct: 407 FNDFYSSGSVYGDPTWRSSNSERDGPGPFGYGLGSAASDVSAKSSPGYVGGYSVNKRQSN 466
Query: 158 RGIAA 144
GIAA
Sbjct: 467 TGIAA 471
>ref|XP_006447738.1| hypothetical protein CICLE_v10015084mg [Citrus clementina]
gi|568830477|ref|XP_006469525.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Citrus sinensis] gi|557550349|gb|ESR60978.1|
hypothetical protein CICLE_v10015084mg [Citrus
clementina]
Length = 481
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 8/68 (11%)
Frame = -2
Query: 326 FGNLYG-----GSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV-- 168
F +LYG GS GD W SS+ E + SFGYG S TA+V+++ +PG+ GGYSV
Sbjct: 413 FADLYGTGGGSGSVYGDPTWRSSSSERDGSGSFGYGLSSGTADVSAKNSPGFVGGYSVNK 472
Query: 167 -RSNRGIA 147
+SNRGIA
Sbjct: 473 RQSNRGIA 480
>emb|CBI28407.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Frame = -2
Query: 311 GGSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSNRGIAA 144
GGS GD W S E + SFGYG G+A ++V ++++PGY GGYSV +SNRGIAA
Sbjct: 343 GGSVYGDSTWRPSNAERDGSGSFGYGLGNAASDVPAKSSPGYVGGYSVTKRQSNRGIAA 401
>ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Frame = -2
Query: 311 GGSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSNRGIAA 144
GGS GD W S E + SFGYG G+A ++V ++++PGY GGYSV +SNRGIAA
Sbjct: 420 GGSVYGDSTWRPSNAERDGSGSFGYGLGNAASDVPAKSSPGYVGGYSVTKRQSNRGIAA 478
>ref|XP_007215320.1| hypothetical protein PRUPE_ppa005132mg [Prunus persica]
gi|462411470|gb|EMJ16519.1| hypothetical protein
PRUPE_ppa005132mg [Prunus persica]
Length = 476
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Frame = -2
Query: 329 NFGNLYGG-SFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RS 162
+F + Y G S GD W SS E E FGYG G AT++V+++++PGY GGYSV +S
Sbjct: 411 SFSDFYNGNSVYGDPTWRSSNSEREGSVPFGYGLGGATSDVSAKSSPGYVGGYSVNKRQS 470
Query: 161 NRGIAA 144
N GIAA
Sbjct: 471 NTGIAA 476
>ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis] gi|223532357|gb|EEF34155.1| Heterogeneous
nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 456
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Frame = -2
Query: 326 FGNLYGG-SFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSVRS---N 159
+G++Y S GD W SS LELE SFG+G G+A ++V ++ + GY GGYSV S N
Sbjct: 392 YGDIYENISLYGDSAWRSSPLELEGSGSFGFGLGNAASDVVTKNSAGYVGGYSVASRQAN 451
Query: 158 RGIAA 144
RGIAA
Sbjct: 452 RGIAA 456
>ref|XP_006467314.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Citrus sinensis] gi|568825901|ref|XP_006467315.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
1-like isoform X2 [Citrus sinensis]
Length = 475
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Frame = -2
Query: 326 FGNLY-GGSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSN 159
+G++Y GSF GD W S+ ELE SFG+G G ++V ++ + GY GGYSV ++N
Sbjct: 411 YGDIYESGSFYGDSTWRPSSSELEGSGSFGFGVGPTASDVMTKNSAGYVGGYSVTDRQAN 470
Query: 158 RGIAA 144
RGIAA
Sbjct: 471 RGIAA 475
>ref|XP_006449887.1| hypothetical protein CICLE_v10015098mg [Citrus clementina]
gi|567915149|ref|XP_006449888.1| hypothetical protein
CICLE_v10015098mg [Citrus clementina]
gi|557552498|gb|ESR63127.1| hypothetical protein
CICLE_v10015098mg [Citrus clementina]
gi|557552499|gb|ESR63128.1| hypothetical protein
CICLE_v10015098mg [Citrus clementina]
Length = 475
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Frame = -2
Query: 326 FGNLY-GGSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSN 159
+G++Y GSF GD W S+ ELE SFG+G G ++V ++ + GY GGYSV ++N
Sbjct: 411 YGDIYESGSFYGDSTWRPSSSELEGSGSFGFGVGPTASDVMTKNSAGYVGGYSVTDRQAN 470
Query: 158 RGIAA 144
RGIAA
Sbjct: 471 RGIAA 475
>ref|XP_002308799.1| hypothetical protein POPTR_0006s01680g [Populus trichocarpa]
gi|222854775|gb|EEE92322.1| hypothetical protein
POPTR_0006s01680g [Populus trichocarpa]
Length = 476
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Frame = -2
Query: 308 GSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSNRGIAA 144
GS GD W SS EL+ SFG+G G+AT++V ++ + GY GGYSV +SNRGIAA
Sbjct: 419 GSLYGDNTWQSSPSELDVSGSFGFGLGNATSDVMTKNSAGYVGGYSVANRQSNRGIAA 476
>ref|XP_007215319.1| hypothetical protein PRUPE_ppa005119mg [Prunus persica]
gi|462411469|gb|EMJ16518.1| hypothetical protein
PRUPE_ppa005119mg [Prunus persica]
Length = 476
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Frame = -2
Query: 326 FGNLY-GGSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSN 159
F + Y GS GD W SS E + P FGYG G A ++V+++++PGY GGYSV + N
Sbjct: 412 FADFYTSGSVYGDPTWRSSNSERDGPGPFGYGLGGAASDVSAKSSPGYVGGYSVNKRQPN 471
Query: 158 RGIAA 144
GIAA
Sbjct: 472 TGIAA 476
>ref|XP_007026294.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508781660|gb|EOY28916.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 439
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Frame = -2
Query: 326 FGNLY-GGSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSN 159
+ N+Y GSF GD W SS +LE +SFG+G G A+++V + + Y GGYSV ++N
Sbjct: 375 YANIYENGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQAN 434
Query: 158 RGIAA 144
RGIAA
Sbjct: 435 RGIAA 439
>ref|XP_007026291.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590626874|ref|XP_007026292.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508781657|gb|EOY28913.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508781658|gb|EOY28914.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 476
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Frame = -2
Query: 326 FGNLY-GGSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSN 159
+ N+Y GSF GD W SS +LE +SFG+G G A+++V + + Y GGYSV ++N
Sbjct: 412 YANIYENGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQAN 471
Query: 158 RGIAA 144
RGIAA
Sbjct: 472 RGIAA 476
>ref|XP_004293446.1| PREDICTED: uncharacterized protein LOC101313871 [Fragaria vesca
subsp. vesca]
Length = 473
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Frame = -2
Query: 326 FGNLY-GGSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RSN 159
F + Y GGS GD W SS E + FGYG GSA ++V+++++PG+ GGYSV + N
Sbjct: 409 FADFYNGGSVYGDPTWRSSNSERDGSGPFGYGLGSAASDVSAKSSPGFVGGYSVNKRQPN 468
Query: 158 RGIAA 144
GIAA
Sbjct: 469 TGIAA 473
>ref|XP_006836782.1| hypothetical protein AMTR_s00088p00174110 [Amborella trichopoda]
gi|548839342|gb|ERM99635.1| hypothetical protein
AMTR_s00088p00174110 [Amborella trichopoda]
Length = 472
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Frame = -2
Query: 329 NFGNLYGGS-FNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RS 162
++G+LYGGS GD W S + EL+ +SF YG G+ ++V ++ + Y GGYSV +S
Sbjct: 407 SYGDLYGGSSVYGDPTWRSGSTELDGSSSFSYGLGTMASDVATKGSGSYMGGYSVSNRQS 466
Query: 161 NRGIAA 144
NRG+AA
Sbjct: 467 NRGVAA 472
>ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis] gi|223531524|gb|EEF33355.1| Heterogeneous
nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 478
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Frame = -2
Query: 329 NFGNLY-GGSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RS 162
++G+LY GS GD W S T ELE SFGYG + A+VT++++ GY G Y V +S
Sbjct: 413 SYGDLYRSGSVYGDSTWRSGTPELEGSGSFGYGLSNIAADVTAKSSEGYIGSYGVTSRQS 472
Query: 161 NRGI 150
NRGI
Sbjct: 473 NRGI 476
>ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Frame = -2
Query: 329 NFGNLY-GGSFNGDQPWNSSTLELESPASFGYGHGSATAEVTSETAPGYGGGYSV---RS 162
++ LY GS D W + T EL+ P SF YG G+A ++VT+ +A Y G YSV +S
Sbjct: 413 SYEELYRSGSVYNDSTWRTPTSELDGPGSFSYGLGNAASDVTANSAEDYIGSYSVANRQS 472
Query: 161 NRGIAA 144
NRGIAA
Sbjct: 473 NRGIAA 478