BLASTX nr result

ID: Mentha24_contig00013888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00013888
         (396 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU19310.1| hypothetical protein MIMGU_mgv1a007883mg [Mimulus...    81   1e-13
ref|XP_004245583.1| PREDICTED: GPN-loop GTPase 1 homolog [Solanu...    75   1e-11
ref|XP_006343951.1| PREDICTED: GPN-loop GTPase 1 homolog isoform...    73   5e-11
ref|XP_004296989.1| PREDICTED: GPN-loop GTPase 1 homolog [Fragar...    60   4e-07

>gb|EYU19310.1| hypothetical protein MIMGU_mgv1a007883mg [Mimulus guttatus]
          Length = 392

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 43/61 (70%), Positives = 49/61 (80%), Gaps = 3/61 (4%)
 Frame = +3

Query: 222 MDIDSKAPENAASVDAQI---KDADNISKTMEQLNIGASSSSFKKKPVIIIVVGMAGCGK 392
           MDIDSK PE+A SV   +   KDAD+ISKTMEQL+IG  SS FK+KPVI+IVVGMAG GK
Sbjct: 1   MDIDSKTPESATSVTEGVTENKDADSISKTMEQLDIGEPSSCFKRKPVIVIVVGMAGSGK 60

Query: 393 T 395
           T
Sbjct: 61  T 61


>ref|XP_004245583.1| PREDICTED: GPN-loop GTPase 1 homolog [Solanum lycopersicum]
          Length = 386

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/61 (62%), Positives = 48/61 (78%), Gaps = 3/61 (4%)
 Frame = +3

Query: 222 MDIDSKAPENAAS---VDAQIKDADNISKTMEQLNIGASSSSFKKKPVIIIVVGMAGCGK 392
           MDIDSK PE A S   VD+++++ D+IS +M+ LNI  SS +FKKKP+IIIVVGMAG GK
Sbjct: 1   MDIDSKVPEEAGSSMQVDSKVQEKDDISNSMQNLNIEGSSFTFKKKPIIIIVVGMAGSGK 60

Query: 393 T 395
           T
Sbjct: 61  T 61


>ref|XP_006343951.1| PREDICTED: GPN-loop GTPase 1 homolog isoform X1 [Solanum tuberosum]
           gi|565354094|ref|XP_006343952.1| PREDICTED: GPN-loop
           GTPase 1 homolog isoform X2 [Solanum tuberosum]
           gi|565354096|ref|XP_006343953.1| PREDICTED: GPN-loop
           GTPase 1 homolog isoform X3 [Solanum tuberosum]
          Length = 388

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 37/61 (60%), Positives = 48/61 (78%), Gaps = 3/61 (4%)
 Frame = +3

Query: 222 MDIDSKAPENAAS---VDAQIKDADNISKTMEQLNIGASSSSFKKKPVIIIVVGMAGCGK 392
           M+IDSK PE A S   VD+++++ D+IS +M+ LNI  SS +FKKKP+IIIVVGMAG GK
Sbjct: 1   MEIDSKVPEEAESSMQVDSKVQEKDDISNSMQNLNIEGSSFTFKKKPIIIIVVGMAGSGK 60

Query: 393 T 395
           T
Sbjct: 61  T 61


>ref|XP_004296989.1| PREDICTED: GPN-loop GTPase 1 homolog [Fragaria vesca subsp. vesca]
          Length = 404

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 3/57 (5%)
 Frame = +3

Query: 234 SKAPENAASVDAQI---KDADNISKTMEQLNIGASSSSFKKKPVIIIVVGMAGCGKT 395
           S  P +A   D+ +   K+ ++++ +ME+LNI  SSSSFKKKPVIIIVVGMAG GKT
Sbjct: 22  SSVPMDAEKDDSAVVKGKETEDLNGSMEKLNIEESSSSFKKKPVIIIVVGMAGSGKT 78


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