BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00013201
         (2063 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]  1230   0.0  
gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Mimulus...  1079   0.0  
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   987   0.0  
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...   985   0.0  
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   984   0.0  
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun...   971   0.0  
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici...   962   0.0  
gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise...   961   0.0  
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   950   0.0  
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...   948   0.0  
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   944   0.0  
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]       939   0.0  
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu...   938   0.0  
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th...   929   0.0  
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]              919   0.0  
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]              917   0.0  
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   917   0.0  
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis...   917   0.0  
ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   906   0.0  
ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   906   0.0  

>gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
          Length = 972

 Score = 1230 bits (3183), Expect = 0.0
 Identities = 608/691 (87%), Positives = 651/691 (94%), Gaps = 4/691 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIEDS--- 1892
            PK+FKK+SGPKIASRFTTDRYHICKEDYDF+WVRTTDFSSMKSIGYLSSLCWEIE+    
Sbjct: 194  PKIFKKVSGPKIASRFTTDRYHICKEDYDFIWVRTTDFSSMKSIGYLSSLCWEIEEGFSN 253

Query: 1891 -DLYTSLPYYTKDVTELAFEGVEFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKLS 1715
             DLYTSLPYYTK+VTELAFE V+F+HASDLVPIVKN S F+VAYE+LFQLNSLVH QKLS
Sbjct: 254  LDLYTSLPYYTKEVTELAFEEVQFNHASDLVPIVKNDSVFQVAYEVLFQLNSLVHCQKLS 313

Query: 1714 LASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAAS 1535
            LA+V+ DLFQILSRLDMD ALLILKEMHKLHSTCY PKSF+EN PSITT  RKNLPSA  
Sbjct: 314  LAAVNTDLFQILSRLDMDTALLILKEMHKLHSTCYEPKSFVENQPSITTHNRKNLPSA-- 371

Query: 1534 EMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLSQ 1355
            E LI+HNIMSCHRVLVTP+KIFCLGPELESSNYIVKNFA YASDF+RVTFVDEDWGRLS 
Sbjct: 372  ERLIEHNIMSCHRVLVTPTKIFCLGPELESSNYIVKNFADYASDFMRVTFVDEDWGRLSP 431

Query: 1354 GAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFASN 1175
            GAVSTSIMKGIFAKPYRTDIY RILSVL+DG+VIG+K+FEFLAFSASQLRSNSVWMFASN
Sbjct: 432  GAVSTSIMKGIFAKPYRTDIYRRILSVLQDGLVIGDKKFEFLAFSASQLRSNSVWMFASN 491

Query: 1174 DHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGVK 995
            DHVKAEDIREWMGCF+ IRSISKCAARMGQLFSSSMQTL+V PRDV+LIP+IEVVSDGVK
Sbjct: 492  DHVKAEDIREWMGCFNKIRSISKCAARMGQLFSSSMQTLKVIPRDVELIPEIEVVSDGVK 551

Query: 994  YCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSMLK 815
            +CFSDGIGKIS  FA ++VR LGLSH+PSAFQIRYGGYKGVIAV+RHSFRKLSLRSSMLK
Sbjct: 552  HCFSDGIGKISIPFAREVVRKLGLSHIPSAFQIRYGGYKGVIAVNRHSFRKLSLRSSMLK 611

Query: 814  FESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKAA 635
            FES NCMLNITKWSESQPCYLNREIITLLSTLGV+D VFL MQ++QLQ LGTMLT++KAA
Sbjct: 612  FESTNCMLNITKWSESQPCYLNREIITLLSTLGVKDSVFLAMQDEQLQLLGTMLTDAKAA 671

Query: 634  LNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGRV 455
            LNVLESTGGGDMKS MARMLLQGY+P NEPYLL MLQS+LENQISD+RSRCRIFVPKGRV
Sbjct: 672  LNVLESTGGGDMKSSMARMLLQGYDPSNEPYLLTMLQSYLENQISDIRSRCRIFVPKGRV 731

Query: 454  LVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLHPG 275
            LVGCLDESGTLEYGQVF R+TMN AELE GDQPFF RVD+TT+ILRGKVVVTKNPCLHPG
Sbjct: 732  LVGCLDESGTLEYGQVFVRLTMNTAELEGGDQPFFQRVDETTSILRGKVVVTKNPCLHPG 791

Query: 274  DVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPRTV 95
            DVRVLEAV+D+KLQEDN+VDCLVFPQKG+RPHPNECSGGDLDGDLYFISWD  LVPPRTV
Sbjct: 792  DVRVLEAVYDIKLQEDNMVDCLVFPQKGERPHPNECSGGDLDGDLYFISWDVDLVPPRTV 851

Query: 94   TPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
            TPMDYTGRRPRIMNHEVTLEEIQTFFADYMI
Sbjct: 852  TPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 882


>gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Mimulus guttatus]
          Length = 1135

 Score = 1079 bits (2790), Expect = 0.0
 Identities = 530/695 (76%), Positives = 608/695 (87%), Gaps = 8/695 (1%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRF-TTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIEDS-- 1892
            PKV+KKISGPK++SRF  TDRY ICKED+DF WVRTTDFS +KSIGYLSSLCWEI++   
Sbjct: 188  PKVYKKISGPKVSSRFPATDRYRICKEDFDFAWVRTTDFSKVKSIGYLSSLCWEIKEGFS 247

Query: 1891 --DLYTSLPYYTKDVTELAFE-GVEFDHA--SDLVPIVKNSSEFEVAYEILFQLNSLVHA 1727
              D YTSLP ++KDV EL  E G  F++A  SDLVPI+ N  +F V YE+LFQ+NSLVH 
Sbjct: 248  SLDAYTSLPCFSKDVIELYLEDGARFNNAPSSDLVPIIPNCPDFRVPYEVLFQINSLVHT 307

Query: 1726 QKLSLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLP 1547
            QK+SLASVD +LFQ LS LDMD+ALLIL +MHKLHSTCY PKSFIE   S++    KNLP
Sbjct: 308  QKMSLASVDNNLFQTLSELDMDRALLILAKMHKLHSTCYEPKSFIETRSSMSIHNVKNLP 367

Query: 1546 SAASEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWG 1367
            S + + L  HN+MSCHR+LVTPS+IFC+GPELESSNYIVKNFAS+ASDF+RVTFVDEDWG
Sbjct: 368  SESFKRLKDHNVMSCHRILVTPSRIFCVGPELESSNYIVKNFASHASDFVRVTFVDEDWG 427

Query: 1366 RLSQGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWM 1187
            R+S  +VSTSI +GIF+KPYRTDIY RILS+LRDGIVIG+K+FEFLAFSASQLRSNSVWM
Sbjct: 428  RISANSVSTSINRGIFSKPYRTDIYRRILSILRDGIVIGDKKFEFLAFSASQLRSNSVWM 487

Query: 1186 FASNDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVS 1007
            FAS++ +KA++IREWMG F+ IRSI+KCAARMGQLFSSS+QTL V+PRDVDLIPDIEV +
Sbjct: 488  FASSETLKADNIREWMGSFTKIRSIAKCAARMGQLFSSSVQTLTVQPRDVDLIPDIEVTT 547

Query: 1006 DGVKYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRS 827
            D VKYCFSDGIGK+SYAFA ++V+ LGLSHMPSAFQIRYGGYKGV+ VDRHSFRKL LR 
Sbjct: 548  DYVKYCFSDGIGKMSYAFAREVVKKLGLSHMPSAFQIRYGGYKGVVVVDRHSFRKLGLRG 607

Query: 826  SMLKFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTN 647
            SM KFES NCMLNITKWSESQPCYLNREIITLLSTLGVED V L MQ++QL+ LG +L  
Sbjct: 608  SMRKFESDNCMLNITKWSESQPCYLNREIITLLSTLGVEDGVLLAMQDEQLKQLGKILIE 667

Query: 646  SKAALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVP 467
             +AALNVLE+ GGG+MK  + RML +GY+P  EPYL MML+SHLENQ+SDLRSR RIFVP
Sbjct: 668  KEAALNVLEAAGGGEMKRVLTRMLTEGYQPSKEPYLCMMLKSHLENQLSDLRSRGRIFVP 727

Query: 466  KGRVLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPC 287
            KGRVLVG LDE+G LEYGQV+ R+TM  +E+ESG+Q FFHR+D+TTA+L+GKVVVTKNPC
Sbjct: 728  KGRVLVGVLDETGNLEYGQVYVRITMTMSEIESGNQRFFHRIDETTAVLKGKVVVTKNPC 787

Query: 286  LHPGDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVP 107
            LHPGDVRVLEAV DVKLQE+NLVDCLVFPQKGDRPHPNECSGGDLDGDLYF+SWD+ LVP
Sbjct: 788  LHPGDVRVLEAVLDVKLQENNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFVSWDENLVP 847

Query: 106  PRTVTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
            PRTV PMDYTGRRPRIM+H+VTLEEIQ FFADYMI
Sbjct: 848  PRTVDPMDYTGRRPRIMDHDVTLEEIQRFFADYMI 882


>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
          Length = 1119

 Score =  987 bits (2551), Expect = 0.0
 Identities = 477/692 (68%), Positives = 582/692 (84%), Gaps = 5/692 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIED---- 1895
            PK+++++SGP +AS+F+ DRYHICKED +FLW+RTTDFS++KSIG  SSLCWE ED    
Sbjct: 184  PKLYQRVSGPAVASKFSADRYHICKEDCEFLWIRTTDFSNIKSIGCSSSLCWETEDGWLS 243

Query: 1894 SDLYTSLPYYTKDVTELAFEGV-EFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
            SDL++SLP   +DV +L  + V +    S+ VP+V+  S+ ++ YEILFQLNSLV  QK+
Sbjct: 244  SDLFSSLPCCNQDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNSLVQTQKI 303

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            SL +++ +L ++LS+L++D A++IL++MHKL S C+ P  FI+    +     KN PS++
Sbjct: 304  SLGAINPNLIEVLSKLELDTAMMILQKMHKLQSICFDPLLFIKTRLHVLGKNNKNRPSSS 363

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
               L+ H++MS HRVLVTPSKI+CLGPELE+SNYIVKNFAS+ASDFLRVTFV+EDWG+L 
Sbjct: 364  YSRLVNHSMMSVHRVLVTPSKIYCLGPELETSNYIVKNFASHASDFLRVTFVEEDWGKLF 423

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
              AVS S+ +GIFAKPYRT IYHRILS+LR+GIVIG KRF FLAFSASQLRSNSVWMFAS
Sbjct: 424  PNAVSMSVEQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSNSVWMFAS 483

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            N++VKAEDIREWMGCF+ IRSISKCAARMGQLFS+S+QT+EVK + V+++PDIEV SDGV
Sbjct: 484  NEYVKAEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVKLQHVEILPDIEVTSDGV 543

Query: 997  KYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSML 818
             YCFSDGIGKIS AFA ++ +  GL+H PSAFQIRYGGYKGVIAVDR+SFRKLSLR SML
Sbjct: 544  SYCFSDGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSML 603

Query: 817  KFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKA 638
            KFES N MLNITKWS++ PCYLNREI+ LLSTLGVED+ F ++ +  L  LG MLT ++A
Sbjct: 604  KFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKAFEDLLDNHLCLLGKMLTTNEA 663

Query: 637  ALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGR 458
            AL+VLES GGG++K  + RMLLQGY P  EPYL MMLQSH ENQISDLRSRCRIF+PKGR
Sbjct: 664  ALDVLESMGGGEVKKILMRMLLQGYAPNQEPYLSMMLQSHFENQISDLRSRCRIFIPKGR 723

Query: 457  VLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLHP 278
            +LVGCLDE+G L+YGQV+ R+TM KAEL++G Q FF +VD+TTA++RGKVVVTKNPCLHP
Sbjct: 724  ILVGCLDETGILKYGQVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVVTKNPCLHP 783

Query: 277  GDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPRT 98
            GDVRVLEAV++V L+E   VDC++FPQKG+RPHPNECSGGDLDGDLYFI WD+ L+P +T
Sbjct: 784  GDVRVLEAVYEVTLEEKTWVDCIIFPQKGERPHPNECSGGDLDGDLYFICWDESLIPCQT 843

Query: 97   VTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
            VTPMDYTGRRPRIM+HEVTLEEIQ FF DYMI
Sbjct: 844  VTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMI 875


>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score =  985 bits (2546), Expect = 0.0
 Identities = 477/692 (68%), Positives = 576/692 (83%), Gaps = 5/692 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIED---- 1895
            PK+++++SGP +AS+F++DRYH+C+ED +FLWVRTTDFS+MKSIG  SS CWEIED    
Sbjct: 185  PKLYQRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFSAMKSIGCSSSPCWEIEDGLLS 244

Query: 1894 SDLYTSLPYYTKDVTELAFEGV-EFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
            SDL + LPY   DV +L  + V +   AS+LVP+    S+ ++ YEILFQLNSL+H  K+
Sbjct: 245  SDLLSGLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLNSLIHTHKI 304

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            SL +V  DL ++LS+L++D A++IL++MHKL STC+ P  FI+    +     KN PS++
Sbjct: 305  SLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLGKNSKNQPSSS 364

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
               L+  N+MS HRVLVTPSK++CLGPELE+SNYIVKNFA +ASDFLRVTFV+EDWG+LS
Sbjct: 365  YSRLVNQNMMSVHRVLVTPSKVYCLGPELETSNYIVKNFALHASDFLRVTFVEEDWGKLS 424

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
              A+S S+ +GIFAKPYRT IYHRILS+LRDG+VIG KRF FLAFSASQLRSNSVWMFAS
Sbjct: 425  PNAISMSVEQGIFAKPYRTKIYHRILSILRDGLVIGSKRFLFLAFSASQLRSNSVWMFAS 484

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            N+HVKAEDIREWMGCF+ IRS+SKCAARMGQLFS+S QT+EV+   V+++PDIEV SDGV
Sbjct: 485  NEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDIEVTSDGV 544

Query: 997  KYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSML 818
             YCFSDGIGKIS AFAS++ +  GLS+ PSAFQIRYGGYKGVIAVDR+SFRKLSLR SML
Sbjct: 545  SYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSML 604

Query: 817  KFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKA 638
            KFES N MLNITKWS++ PCYLNREI+ LLSTLGVED+VF ++ +  L  LG MLT ++A
Sbjct: 605  KFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKVFEDLLDNHLHLLGKMLTTNEA 664

Query: 637  ALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGR 458
            AL+VLES GGGD+K  + RML QGY P  EPYL MMLQSH ENQ+SDLRSRCRIF+ KGR
Sbjct: 665  ALDVLESIGGGDVKKILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRCRIFIHKGR 724

Query: 457  VLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLHP 278
            VLVGCLDE+G L YGQV+AR+TM KAEL+S  Q FF +VD+TTA++RG VVVTKNPCLHP
Sbjct: 725  VLVGCLDETGILNYGQVYARITMTKAELQSAQQSFFQKVDETTAVVRGNVVVTKNPCLHP 784

Query: 277  GDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPRT 98
            GDVRVLEAV++V L+E   VDC++FPQKG+RPHPNECSGGDLDGDLYFISWD+ L+P +T
Sbjct: 785  GDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWDENLIPRQT 844

Query: 97   VTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
            VTPMDYTGRR RIM+HEVTL+EIQ FF DYMI
Sbjct: 845  VTPMDYTGRRTRIMDHEVTLQEIQRFFVDYMI 876


>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
          Length = 1119

 Score =  984 bits (2545), Expect = 0.0
 Identities = 477/692 (68%), Positives = 580/692 (83%), Gaps = 5/692 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIED---- 1895
            PK+++++SGP +AS+F+ DRYHICKED +FLWVRTTDFS++KSIG  SSLCWE ED    
Sbjct: 184  PKLYQRVSGPAVASKFSADRYHICKEDCEFLWVRTTDFSNIKSIGCSSSLCWETEDGWLS 243

Query: 1894 SDLYTSLPYYTKDVTELAFEGV-EFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
            SDL +SLP   KDV +L  + V +    S+ VP+V+  S+ ++ YEILFQLNSLV  QK+
Sbjct: 244  SDLLSSLPCCNKDVIDLDLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNSLVQTQKI 303

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            SL +V+ DL ++LS+L++D A++IL++MHKL STC+ P +FI+    +     KN  S++
Sbjct: 304  SLGAVNPDLIEVLSKLELDTAMMILQKMHKLQSTCFEPLTFIKTRLHVLGKNNKNQLSSS 363

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
               L+ H++MS HRVLVTPSKI+CLGPELE+SNYIVKNFA +ASDFLRVTFV+EDWG+L 
Sbjct: 364  YSRLVNHSMMSVHRVLVTPSKIYCLGPELETSNYIVKNFAEHASDFLRVTFVEEDWGKLF 423

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
              AVS S+ +GIFAKPYRT IYHRILS+LR+GIVIG KRF FLAFSASQLRSNSVWMFAS
Sbjct: 424  PNAVSMSVEQGIFAKPYRTKIYHRILSILREGIVIGTKRFFFLAFSASQLRSNSVWMFAS 483

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            N++VKAEDIREWMGCF+ IRSISKCAARMGQLFS+S+QT+EV+ + V+++PDIEV SDGV
Sbjct: 484  NEYVKAEDIREWMGCFNKIRSISKCAARMGQLFSTSVQTMEVQLQHVEILPDIEVTSDGV 543

Query: 997  KYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSML 818
             YCFSDGIGKIS AFA ++ +  GL+H PSAFQIRYGGYKGVIAVDR+SFRKLSLR SML
Sbjct: 544  SYCFSDGIGKISQAFARQVAQKCGLNHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSML 603

Query: 817  KFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKA 638
            KFES N MLNITKWS++ PCYLNREI+ LLSTLGVED+   ++ +  L+ LG MLT ++A
Sbjct: 604  KFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKALEDLLDNHLRLLGKMLTTNEA 663

Query: 637  ALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGR 458
            AL+VLES GGGD+K  + RMLLQGY P  EPYL MMLQSH ENQISDLRSRCRIF+PKGR
Sbjct: 664  ALDVLESMGGGDVKKILMRMLLQGYAPNREPYLSMMLQSHFENQISDLRSRCRIFIPKGR 723

Query: 457  VLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLHP 278
            +LVGCLDE+G L+YG+V+ R+TM KAEL++G Q FF +VD+TTA++RGKVVVTKNPCLHP
Sbjct: 724  ILVGCLDETGILKYGEVYVRITMTKAELQNGQQNFFQKVDETTAVVRGKVVVTKNPCLHP 783

Query: 277  GDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPRT 98
            GDVRVLEAV++V L+E   VDC++FPQ G+RPHPNECSGGDLDGDLYFI WD+ L+P +T
Sbjct: 784  GDVRVLEAVYEVTLEEKTWVDCIIFPQNGERPHPNECSGGDLDGDLYFICWDESLIPHQT 843

Query: 97   VTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
            VTPMDYTGRRPRIM+HEVTLEEIQ FF DYMI
Sbjct: 844  VTPMDYTGRRPRIMDHEVTLEEIQRFFVDYMI 875


>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
            gi|462407047|gb|EMJ12511.1| hypothetical protein
            PRUPE_ppa000513mg [Prunus persica]
          Length = 1118

 Score =  971 bits (2509), Expect = 0.0
 Identities = 473/693 (68%), Positives = 567/693 (81%), Gaps = 6/693 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIED---- 1895
            P++F+KISGP +A+RF+TDRYH+CK+D+DFLWVRTTDFS MKSIGY +S CWEIE+    
Sbjct: 183  PRIFRKISGPNVAARFSTDRYHVCKDDFDFLWVRTTDFSDMKSIGYSTSFCWEIEEEFSV 242

Query: 1894 SDLYTSLPYYT-KDVTELAFE-GVEFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQK 1721
            SD++   PYY   DV +L  + G ++   S+ VP+VK  S+ ++ YEILFQLN+LVH+QK
Sbjct: 243  SDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLVKCRSDSKLPYEILFQLNALVHSQK 302

Query: 1720 LSLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSA 1541
            +SLA+ D+DL + LS L +D   ++L+++HK  +TCY P SF++    +     K+ PS 
Sbjct: 303  ISLAATDSDLIEFLSGLSVDTTNVLLEKLHKRKTTCYDPLSFLKMQLHVLERNHKSRPSP 362

Query: 1540 ASEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRL 1361
                L++HN+MSCHRVL+TPSKI CLGPELE SNY+VKNFA+YASDF+RVTFVDEDW +L
Sbjct: 363  YKR-LMEHNVMSCHRVLITPSKICCLGPELEKSNYVVKNFAAYASDFMRVTFVDEDWSKL 421

Query: 1360 SQGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFA 1181
               A+STSI +GIFAKP+RT IYHR+LS+LRDGIVIGEKRFEFLAFSASQLRS+SVWMF+
Sbjct: 422  PANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIGEKRFEFLAFSASQLRSSSVWMFS 481

Query: 1180 SNDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDG 1001
            SND+VKAEDIREWMGCFS IRSISKCAARMGQLFSSS QTL V  +DV++IPD+E  SDG
Sbjct: 482  SNDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSSTQTLVVPAQDVEIIPDVETSSDG 541

Query: 1000 VKYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSM 821
            V YCFSDGIGKIS +FA K+ +  GL   PSAFQIRYGGYKGVIAVD  SFRKLSLRSSM
Sbjct: 542  VTYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRYGGYKGVIAVDCRSFRKLSLRSSM 601

Query: 820  LKFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSK 641
            LKFES N MLN+TKWS++ PCYLNREII+LLSTLGV+D  F  +QE+QL+ LG M T   
Sbjct: 602  LKFESKNRMLNVTKWSDAMPCYLNREIISLLSTLGVKDETFEALQEEQLRLLGKMRTERG 661

Query: 640  AALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKG 461
            AALNV E   G D K+ + +MLL GYEP  EPYL MMLQ++ EN +SDL+SRCRIFVPKG
Sbjct: 662  AALNVFERLNGADSKNTLVKMLLHGYEPNAEPYLSMMLQAYYENHLSDLKSRCRIFVPKG 721

Query: 460  RVLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLH 281
            RVLVGCLDE+G L+YGQV+ R+TM KAE E GDQ FF +VD+TT ++ GKVVVTKNPCLH
Sbjct: 722  RVLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFFQKVDETTLVVTGKVVVTKNPCLH 781

Query: 280  PGDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPR 101
            PGDVRVL+AV+DV L+E N+VDCL+FPQKG+RPHPNECSGGDLDGDL+FISWDK LVP  
Sbjct: 782  PGDVRVLDAVYDVVLEEKNMVDCLIFPQKGERPHPNECSGGDLDGDLFFISWDKDLVPSH 841

Query: 100  TVTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
            TV PMDY+ RRPRIM+H VTLEEIQ FF DYMI
Sbjct: 842  TVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMI 874


>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 983

 Score =  962 bits (2487), Expect = 0.0
 Identities = 464/691 (67%), Positives = 568/691 (82%), Gaps = 5/691 (0%)
 Frame = -2

Query: 2059 KVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIED----S 1892
            +++KKISGP IAS+F+ DRYH+CKED+DF+WVRTTDFSS+KS+G  +S CWEIE+    S
Sbjct: 33   RIYKKISGPDIASKFSADRYHMCKEDFDFIWVRTTDFSSVKSVGQSTSFCWEIEEGLEAS 92

Query: 1891 DLYTSLPYYTKDVTELAFE-GVEFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKLS 1715
            D++ S PYYT+   E+  E G E+  AS++VP+VK  S+ ++ YEILFQLNSLVH QK+S
Sbjct: 93   DIFKSFPYYTEAREEVILEDGEEWGSASEIVPLVKCGSDSKLPYEILFQLNSLVHTQKIS 152

Query: 1714 LASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAAS 1535
            LA+VD +L   L  L +D A +IL+++HKL  TCY P +FI+    +     K    ++S
Sbjct: 153  LAAVDTNLITTLGSLTIDTATMILQKLHKLAVTCYDPLAFIKKQLHVPGRNLKRPFFSSS 212

Query: 1534 EMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLSQ 1355
            + L+ HNIMSCHR L+TPSKI+CLGPELESSNY+VKNFASYASDF+RVTFV+EDW +L  
Sbjct: 213  KNLVNHNIMSCHRALITPSKIYCLGPELESSNYVVKNFASYASDFMRVTFVEEDWSKLPA 272

Query: 1354 GAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFASN 1175
             A+S SI +GIFAKP+RT IYHRILS+LRDGIVIG K+FEFLAFSASQLRSNSVWMFASN
Sbjct: 273  NAISMSIQRGIFAKPFRTGIYHRILSILRDGIVIGAKKFEFLAFSASQLRSNSVWMFASN 332

Query: 1174 DHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGVK 995
            D  KAE+IREWMGCF+ I SISKCAARMGQLFSSS QT  V P+D+++IPDIEV SDG+ 
Sbjct: 333  DKKKAEEIREWMGCFNKIHSISKCAARMGQLFSSSKQTFIVSPQDMEIIPDIEVTSDGIN 392

Query: 994  YCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSMLK 815
            YCFSDGIGKIS +FA ++ +  GL+  PSAFQIRYGGYKGVIAVDR+SFRKLSLR SM K
Sbjct: 393  YCFSDGIGKISLSFARQVAQKCGLNRTPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMCK 452

Query: 814  FESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKAA 635
            FES N MLN+TKWSES PCYLNREIITLL+TLGV+D +F  +Q+QQLQ L  MLTN ++A
Sbjct: 453  FESENRMLNVTKWSESMPCYLNREIITLLTTLGVKDEIFEGLQQQQLQLLNRMLTNRESA 512

Query: 634  LNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGRV 455
            LNVLE+    + K+ + +ML+QGYEP  EPYL MMLQ++ EN + +LRSRCRIFVPKGR+
Sbjct: 513  LNVLENLAWANCKNILIKMLVQGYEPNVEPYLSMMLQAYHENLLVELRSRCRIFVPKGRI 572

Query: 454  LVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLHPG 275
            L+GCLDE+  L+YGQV+ R+TM KAEL+  DQ  FHRVD+TTA++ GKV+VTKNPCLHPG
Sbjct: 573  LIGCLDETRILDYGQVYVRITMTKAELQDADQASFHRVDETTAVVTGKVIVTKNPCLHPG 632

Query: 274  DVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPRTV 95
            D+RVLEAV++V+L+E  LVDC++FPQKG+RPHPNECSGGDLDGD +FISWDKGL+P  T 
Sbjct: 633  DIRVLEAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFISWDKGLIPGETE 692

Query: 94   TPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
            +PMDY GRRPR M+H+VTLEEIQ FF DYMI
Sbjct: 693  SPMDYQGRRPRKMDHDVTLEEIQKFFIDYMI 723


>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
          Length = 1094

 Score =  961 bits (2484), Expect = 0.0
 Identities = 471/698 (67%), Positives = 574/698 (82%), Gaps = 11/698 (1%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEI----ED 1895
            PKVF+KISGP + S+F +DRY+IC +D DF+WVRTTDFS  KSIGY S+LC  I      
Sbjct: 159  PKVFRKISGPDVTSKFASDRYNICIQDMDFIWVRTTDFSEKKSIGYSSALCLNIPKGLNS 218

Query: 1894 SDLYTSLPYYTKDVTELAFEGVEFDHASD-LVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
              L TSLPY +KD+ +L+ + +  +H  D LVP+  N+S FE+AYE+LFQ++SLVH QK+
Sbjct: 219  PKLCTSLPYMSKDLIKLSLQEMNLNHLRDSLVPVFANNSGFEIAYEVLFQVHSLVHTQKI 278

Query: 1717 SLASV-DADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSA 1541
               S  D++LF ILSRLD+D ALL+LKEMHKL STCY PK +I  V  ++   R++  + 
Sbjct: 279  GFVSAFDSELFGILSRLDVDTALLVLKEMHKLPSTCYNPKEWITEVGLLSVESRRSKKNV 338

Query: 1540 ASEMLIKH-----NIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDE 1376
            +    +K+     N+MSCHR+LVTP +I+CLGPELE+SNY++KNFASY SDF+RVTFVDE
Sbjct: 339  SVSSSMKNGLKDQNVMSCHRILVTPLRIYCLGPELEASNYVIKNFASYGSDFVRVTFVDE 398

Query: 1375 DWGRLSQGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNS 1196
            DWGRL   ++ST+  +GIFAKPY+TDIY+RILSVLRDGI IGEK+FEFLAFSASQLRSNS
Sbjct: 399  DWGRLPAASISTTTKQGIFAKPYKTDIYYRILSVLRDGIAIGEKKFEFLAFSASQLRSNS 458

Query: 1195 VWMFASNDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIE 1016
            VWMFASND +K+ DIR+WMGCF+ IRSISKCAARMGQLFSSS QT+EV P + +LIPD+E
Sbjct: 459  VWMFASNDSIKSVDIRDWMGCFNSIRSISKCAARMGQLFSSSRQTIEVSPGETELIPDVE 518

Query: 1015 VVSDGVKYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLS 836
              SDGVKYCFSDGIGKIS +FA +I  MLGLSH+PSAFQIRYGGYKG++ V+RHS  KL+
Sbjct: 519  CFSDGVKYCFSDGIGKISSSFAQEISSMLGLSHVPSAFQIRYGGYKGIVVVNRHSRYKLA 578

Query: 835  LRSSMLKFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTM 656
            LRSSMLKFES N MLN+TKWSESQPCYLNREII LLSTLGV+D   LEMQ++QL+ LG++
Sbjct: 579  LRSSMLKFESNNRMLNVTKWSESQPCYLNREIIVLLSTLGVKDAALLEMQQRQLEFLGSV 638

Query: 655  LTNSKAALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRI 476
            L +S+AA++VLES+G G+ KS + RML  GY+P  EPYL MML+S+LENQI+DLR+RCR+
Sbjct: 639  LVDSQAAMSVLESSGMGESKSILPRMLSLGYKPTEEPYLHMMLRSYLENQIADLRTRCRV 698

Query: 475  FVPKGRVLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTK 296
            FVPKGRVL+G LDE G LEYGQV+ RVTMNK+E+    QP+F  VD  ++++ GKVV+TK
Sbjct: 699  FVPKGRVLLGVLDEFGRLEYGQVYVRVTMNKSEV-GEKQPYFRSVDGNSSVVVGKVVITK 757

Query: 295  NPCLHPGDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKG 116
            NPCLHPGDVRVLEAV D +L  +NLVDCLVFPQKG RPHPNECSGGDLDGDLYF+SWD  
Sbjct: 758  NPCLHPGDVRVLEAVCDPELVSENLVDCLVFPQKGHRPHPNECSGGDLDGDLYFVSWDTD 817

Query: 115  LVPPRTVTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
            LVPPRTV PMDYTGRRPRIM+H+VT++EIQ FFADYM+
Sbjct: 818  LVPPRTVDPMDYTGRRPRIMDHDVTIQEIQRFFADYMV 855


>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
          Length = 1131

 Score =  950 bits (2456), Expect = 0.0
 Identities = 460/692 (66%), Positives = 563/692 (81%), Gaps = 5/692 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIED---- 1895
            PK+++K+SGP +AS+F +DRYHICKED+DF WVRTTDFS  KSIG  +S  WEI++    
Sbjct: 198  PKIYQKVSGPHVASKFPSDRYHICKEDFDFFWVRTTDFSVTKSIGCSTSFFWEIKNGLLA 257

Query: 1894 SDLYTSLPYYTKDVTELAFE-GVEFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
            SD+    P+Y +D T+L  E G EF   S++VP+VK    F +++E+LFQLNSLVH QK+
Sbjct: 258  SDISNIFPFYKEDKTDLILEEGEEFCTTSEIVPLVKCRPGFNLSHEVLFQLNSLVHNQKV 317

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            SL + DA+L QIL+ L M+ AL++L+++HKL S CY P SF++    +     K++P ++
Sbjct: 318  SLVAADAELIQILNGLSMETALMVLQKLHKLKSICYDPVSFVKTQLHVLGRNCKSIPLSS 377

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
             + LI HN+MSC+R LVTP KI+CLGPELE+SNY+VKNFA YASDF+RVTFV+EDW +L 
Sbjct: 378  HKRLIDHNVMSCYRALVTPMKIYCLGPELETSNYVVKNFAKYASDFMRVTFVEEDWSKLP 437

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
              A+STSI +GIFAKPYRT IY RIL++L+DGIVIG+K +EFLAFSASQLR+NSVWMFAS
Sbjct: 438  ANALSTSIQRGIFAKPYRTKIYSRILTILQDGIVIGDKHYEFLAFSASQLRNNSVWMFAS 497

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            ND V AED+REWMGCF+ I S+SKCAARMGQLFSSS QTL V  +DV++IPD+EV SDG 
Sbjct: 498  NDEVSAEDVREWMGCFNKIHSVSKCAARMGQLFSSSKQTLVVPVQDVEMIPDVEVTSDGN 557

Query: 997  KYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSML 818
             YCFSDGIGKIS +FA ++ +  GLSH PSAFQIRYGGYKGVIAVDR+SFRKLSLR SML
Sbjct: 558  TYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGYKGVIAVDRNSFRKLSLRRSML 617

Query: 817  KFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKA 638
            KFES N MLN+TKWSES PC+LNREII+LLSTLGV+D VF  MQ+QQL  LG ML N +A
Sbjct: 618  KFESRNRMLNVTKWSESMPCFLNREIISLLSTLGVKDDVFEAMQQQQLILLGKMLINREA 677

Query: 637  ALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGR 458
            AL+VL+   G D K+ + +MLLQGYEP  EPYL MML SH ENQ+SDL+SRCRI+VPKGR
Sbjct: 678  ALDVLQKLNGVDSKNILVKMLLQGYEPNVEPYLSMMLLSHHENQLSDLKSRCRIYVPKGR 737

Query: 457  VLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLHP 278
            +L+GC DE+G L YGQVF RVTM + ELES DQ FFHRVD  T+I++GKV+VTKNPCLHP
Sbjct: 738  LLIGCFDETGILNYGQVFVRVTMTREELESKDQSFFHRVDDKTSIVKGKVLVTKNPCLHP 797

Query: 277  GDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPRT 98
            GDVRVLEAV+++KL+E + VDC++FPQKG+RPHPNECSGGDLDGD++FISWD  L+P  T
Sbjct: 798  GDVRVLEAVYEMKLEEKDYVDCIIFPQKGERPHPNECSGGDLDGDIFFISWDNDLIPCET 857

Query: 97   VTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
              PMDYTGRR RIM+H+VTLEEI  FF DYMI
Sbjct: 858  EPPMDYTGRRSRIMDHDVTLEEIHKFFVDYMI 889


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score =  948 bits (2450), Expect = 0.0
 Identities = 465/692 (67%), Positives = 567/692 (81%), Gaps = 5/692 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIEDS--- 1892
            PK+F+K +GP IAS+F+ DRYHI KED +FLW+RTTDFSS+KS+G  +S CWEI++    
Sbjct: 183  PKIFQKFAGPNIASKFSADRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFCWEIKEGFPA 242

Query: 1891 -DLYTSLPYYTKDVTELAFE-GVEFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
             D++ S PYY KD+TEL  E G  F   S LVP+VK  S  ++AYEILFQLNSLVHAQK+
Sbjct: 243  LDIFASFPYY-KDLTELTLEQGEGFCSDSGLVPLVKCESGPKLAYEILFQLNSLVHAQKI 301

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            SLA+VD DL +ILS L +D A++IL+++HK  ST Y P SFI+    I  +  KNLP ++
Sbjct: 302  SLAAVDTDLIEILSNLPVDTAIMILQKLHKRKSTRYDPISFIKAQAHIINMNIKNLPPSS 361

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
               L  +N+MSCHRVLVTPSKI+CLGPELESSNY+VK++A+YASDF+RV+FV+EDW +L 
Sbjct: 362  HSRLTNNNVMSCHRVLVTPSKIYCLGPELESSNYVVKHYAAYASDFVRVSFVEEDWSKLP 421

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
              A+S SI K  FA P+RT+IYHRILS+LR+GIVIG KRF+FLAFSASQLRSNSVWMFAS
Sbjct: 422  SNALSMSIRKAFFADPFRTEIYHRILSILREGIVIGAKRFQFLAFSASQLRSNSVWMFAS 481

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            ND V+ +DIREWMGCF  IRS+SKCAARMGQLFSSS+QTL V  +DV++IPDIEV SDG 
Sbjct: 482  NDKVRVDDIREWMGCFKKIRSVSKCAARMGQLFSSSVQTLPVPVQDVEVIPDIEVTSDGF 541

Query: 997  KYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSML 818
             YCFSDGIGKIS +FA ++ +  GL   PSAFQIRYGGYKGVIAVDR+SFRKLSLRSSML
Sbjct: 542  GYCFSDGIGKISLSFAKQVAQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFRKLSLRSSML 601

Query: 817  KFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKA 638
            KFES N MLN+TKWSES PCYLNREI++LLSTLGVED  F  +  +Q+  L  MLTN +A
Sbjct: 602  KFESQNRMLNVTKWSESTPCYLNREIVSLLSTLGVEDENFEALLNEQMHLLDKMLTNRQA 661

Query: 637  ALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGR 458
            AL+VLES GG D K+ +A+MLLQGYEP  EPYL MMLQ++ E+Q+SD+R+RCRIFVPK R
Sbjct: 662  ALDVLESMGGIDNKNILAKMLLQGYEPNVEPYLSMMLQAYRESQLSDIRTRCRIFVPKAR 721

Query: 457  VLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLHP 278
            VL+GCLDE+G L YGQV+ RVTM KAE +  +Q FF +VD TT+++ GKV+VTKNPCLHP
Sbjct: 722  VLIGCLDETGILNYGQVYVRVTMTKAEHKCRNQSFFQKVDDTTSVVIGKVIVTKNPCLHP 781

Query: 277  GDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPRT 98
            GD+RVL+AV++V+L+E  LVDC++FPQKG+RPHPNECSGGDLDGD +FI WD+GL+P +T
Sbjct: 782  GDIRVLDAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFICWDEGLIPSQT 841

Query: 97   VTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
              PMDYT RRPRIM+H+VTLEEIQ FF DYMI
Sbjct: 842  EAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMI 873


>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca subsp.
            vesca]
          Length = 1136

 Score =  944 bits (2441), Expect = 0.0
 Identities = 455/694 (65%), Positives = 561/694 (80%), Gaps = 7/694 (1%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIED---- 1895
            PK+F+++SGP +AS+F+ DRYH+CKED+D+LWVR TDFS MKSIG+ ++ CWEI++    
Sbjct: 186  PKIFRQLSGPNVASKFSADRYHVCKEDFDYLWVRCTDFSEMKSIGHSTAFCWEIQEDVAA 245

Query: 1894 SDLYTSLPYYTKDVTELAFE-GVEFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
            + ++T+ P + KDV +L FE G +    S+ VP+VK  ++ +  YEILFQLN LVHAQK+
Sbjct: 246  AGVFTTFPSFRKDVVDLMFEDGGDCLLVSETVPLVKCEADMKFPYEILFQLNVLVHAQKI 305

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            SLA+V +DL +    L MD A ++L+++ KL +TCY P SF++       L+ +N     
Sbjct: 306  SLAAVGSDLIEFFGGLSMDTANVLLEKLQKLKTTCYDPLSFVKVQ---LQLLERNSKKRL 362

Query: 1537 S--EMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGR 1364
            S  + L++HN+MSCHRVL+TPSKI+CLGPELE SNY+VKNFA YASDF+RVTFV+EDWG+
Sbjct: 363  SPHQRLMEHNVMSCHRVLITPSKIYCLGPELEKSNYVVKNFAQYASDFMRVTFVEEDWGK 422

Query: 1363 LSQGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMF 1184
            L   A+STSI +G FAKP+RT IY RILS+LRDGIVIG+KRFEFLAFSASQLRSNSVWMF
Sbjct: 423  LPVNALSTSIEQGFFAKPFRTGIYQRILSILRDGIVIGDKRFEFLAFSASQLRSNSVWMF 482

Query: 1183 ASNDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSD 1004
            ASND VKAEDIR+WMGCF+ IRS+SKCAARMGQLFSSS QTL V  +DV+LIPDIE  +D
Sbjct: 483  ASNDSVKAEDIRDWMGCFNKIRSVSKCAARMGQLFSSSTQTLTVPQKDVELIPDIETTTD 542

Query: 1003 GVKYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSS 824
            GV YCFSDGIGKIS +FA ++ +  GL+  PSAFQIRYGGYKGVIAVDR+SFRKLSLRSS
Sbjct: 543  GVSYCFSDGIGKISLSFARQVAQKCGLNDTPSAFQIRYGGYKGVIAVDRNSFRKLSLRSS 602

Query: 823  MLKFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNS 644
            MLKF+S N MLN+TKWS S PC+LNREIITL+STLGVED  F  +Q++QL  LG M  + 
Sbjct: 603  MLKFDSDNRMLNVTKWSSSMPCFLNREIITLMSTLGVEDEAFEALQQEQLDLLGRMRKDR 662

Query: 643  KAALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPK 464
              AL+ LE   G D  + + ++LLQGYEP  EPYL MMLQ+H E+ ++DL+SRCR++VPK
Sbjct: 663  NVALSSLEKLSGADSNNILVKLLLQGYEPNLEPYLSMMLQAHYEHHLADLKSRCRMYVPK 722

Query: 463  GRVLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCL 284
            GR+LVGCLDE+GTL YGQV+ R+TM KAE E G Q FF RVD+ T I+ GKVVVTKNPCL
Sbjct: 723  GRILVGCLDETGTLNYGQVYLRITMTKAEQEMGHQSFFQRVDEATCIVTGKVVVTKNPCL 782

Query: 283  HPGDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPP 104
            HPGD+RVLEAV+DV L+E N+VDC++FPQKG+RPHPNECSGGDLDGDL+FISWDK L+PP
Sbjct: 783  HPGDIRVLEAVYDVGLEEKNMVDCILFPQKGERPHPNECSGGDLDGDLFFISWDKSLIPP 842

Query: 103  RTVTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
             TV PMDY+ RRPR M+H+VTLEEIQ FF DYMI
Sbjct: 843  TTVPPMDYSARRPRNMDHDVTLEEIQKFFVDYMI 876


>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
          Length = 1115

 Score =  939 bits (2427), Expect = 0.0
 Identities = 458/692 (66%), Positives = 560/692 (80%), Gaps = 5/692 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIED---- 1895
            PK++K+IS P   S+F  DRYHICKED++F WVRTTDF   KSIG+ +SLCW+ ++    
Sbjct: 184  PKIYKRISRP---SKFVADRYHICKEDFEFHWVRTTDFLESKSIGHSTSLCWDAKEDFLS 240

Query: 1894 SDLYTSLPYYTKDVTELAFEGV-EFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
            SD + S PYY + + +L  E   EF   S+ VP++K  +   ++YEILFQLNSLVH QK+
Sbjct: 241  SDTFRSFPYYREGMKDLILEDSDEFCSVSETVPLIKCPAGSNLSYEILFQLNSLVHMQKI 300

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            S AS DADL +    L++D A  +++++HKL STCY P S  +    I     KN PS+A
Sbjct: 301  SFASADADLIEYFGSLNIDTANAVIQKLHKLKSTCYDPLSLAKTYAHILEKNTKN-PSSA 359

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
             + L ++++MSCHR L+TPSKI+C+GPELE+SNY+VKNFA+YASDFLRVTFV+EDWG+L 
Sbjct: 360  IKRLTENSLMSCHRALITPSKIYCMGPELETSNYVVKNFAAYASDFLRVTFVEEDWGKLH 419

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
               VSTSI +GIFAKPYRT IY RILS+LR+GI+IG KR+EFLAFSASQLRS++VWMFAS
Sbjct: 420  PHVVSTSIEQGIFAKPYRTGIYDRILSILRNGILIGAKRYEFLAFSASQLRSSAVWMFAS 479

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            ND+VKAEDIREWMGCF+ IRS+SKCAARMGQLFSSS QTL V  +D+++IPD+EV +DG+
Sbjct: 480  NDNVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSRQTLIVPTQDLEIIPDVEVTTDGI 539

Query: 997  KYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSML 818
             YCFSDGIGKIS +FA ++ +  GL   PSAFQIRYGGYKGVIAV+R SFRKLSLRSSML
Sbjct: 540  DYCFSDGIGKISSSFARQVAQKCGLKETPSAFQIRYGGYKGVIAVNRSSFRKLSLRSSML 599

Query: 817  KFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKA 638
            KFES N MLN+TKWS S PCYLNREI++LLS+LGV+D  FL +  +QL  LG M TN +A
Sbjct: 600  KFESSNRMLNVTKWSGSMPCYLNREIVSLLSSLGVKDESFLALLREQLLLLGKMRTNREA 659

Query: 637  ALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGR 458
            ALNVLE+  G D  + + +MLLQGYEP  EPYL MM+QS+ ENQ+SDL++RCRIFVPKG+
Sbjct: 660  ALNVLENLNGSDSSNILVKMLLQGYEPNAEPYLSMMIQSYYENQLSDLKTRCRIFVPKGK 719

Query: 457  VLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLHP 278
            VL+GCLDE+G LEYGQV+ R+TM KAELE+G+Q FF +VD  T+I+ GKVVVTKNPCLHP
Sbjct: 720  VLIGCLDETGILEYGQVYVRLTMKKAELEAGNQSFFRKVDDETSIVVGKVVVTKNPCLHP 779

Query: 277  GDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPRT 98
            GDVRVLEAV+D KL+E+ LVDCLVFPQKG+RPHPNECSGGDLDGDL+FISWD  L+PPRT
Sbjct: 780  GDVRVLEAVYDAKLEEEGLVDCLVFPQKGERPHPNECSGGDLDGDLFFISWDTNLIPPRT 839

Query: 97   VTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
              PMDY GRRPRIM+H+VTLEEIQ FF DYMI
Sbjct: 840  TAPMDYIGRRPRIMDHDVTLEEIQKFFVDYMI 871


>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
            gi|222868578|gb|EEF05709.1| hypothetical protein
            POPTR_0015s08500g [Populus trichocarpa]
          Length = 1110

 Score =  938 bits (2425), Expect = 0.0
 Identities = 456/692 (65%), Positives = 564/692 (81%), Gaps = 5/692 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEI----ED 1895
            P++++KISGP IAS+F+T+RY  CKED+DFLWVRTTD S++KSIG  +S CWEI    E 
Sbjct: 185  PRIYQKISGPGIASKFSTNRYFYCKEDFDFLWVRTTDISAIKSIGQSTSFCWEIGEGLEA 244

Query: 1894 SDLYTSLPYYTKDVTELAFE-GVEFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
            SD + + PYY +D+  L  E G EF  AS+ VP+++  S+ ++AYE+LFQLNSLVH QK+
Sbjct: 245  SDTFRNFPYYQEDMNRLDLEDGEEFCSASETVPLIRCGSD-KLAYEVLFQLNSLVHTQKI 303

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            SLA+VD+DL +IL  L ++ A++IL+++HKL  TCY P SF++        +R++L S+ 
Sbjct: 304  SLAAVDSDLIKILRNLTVNTAIIILQKLHKLKMTCYDPLSFVKQS------LRESL-SSP 356

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
             + L ++NIMSCHR L+TPSKIFCLGPE E+SNY+VK+FA YASDF+RVTFV+EDW +L 
Sbjct: 357  PKSLTENNIMSCHRALITPSKIFCLGPEYETSNYVVKHFAQYASDFIRVTFVEEDWSKLP 416

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
              A+STSI +GIFAKP+RT IYHRILS+LRDG VIG KRFEFLAFSASQLRSNSVWMFAS
Sbjct: 417  ANAISTSIQRGIFAKPFRTGIYHRILSILRDGFVIGAKRFEFLAFSASQLRSNSVWMFAS 476

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            N+ VKAEDIR+WMGCF  IRS+SKCAARMGQLFSSS+QT  V  +DV++IPDIEV +DG+
Sbjct: 477  NNGVKAEDIRKWMGCFDKIRSVSKCAARMGQLFSSSLQTFVVPVQDVEIIPDIEVTTDGI 536

Query: 997  KYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSML 818
             YCFSDGIGKIS +FA ++    GLSH PSAFQIRYGGYKGV+AVDR+SFRKLSLRSSML
Sbjct: 537  DYCFSDGIGKISLSFAKQVAHKCGLSHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSML 596

Query: 817  KFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKA 638
            KF+S N MLN+TKWSES PCYLNREII+LLSTLGV D +F  +Q++QL  L  MLTN ++
Sbjct: 597  KFDSENRMLNVTKWSESMPCYLNREIISLLSTLGVADEIFQALQQKQLYRLRKMLTNKES 656

Query: 637  ALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGR 458
            AL+VLE+    D K+ + +MLLQGYEP  EPYL MMLQ++ EN + +LRSRCRIFVPKGR
Sbjct: 657  ALDVLENLAWADSKNILVQMLLQGYEPNVEPYLSMMLQAYHENSLMELRSRCRIFVPKGR 716

Query: 457  VLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLHP 278
            +L+GCLDESG L+YGQV+ R+TM KAEL+  DQ FF +VD++T+ + G+V VTKNPCLHP
Sbjct: 717  ILIGCLDESGILDYGQVYVRITMTKAELQCCDQSFFRKVDESTSTIIGEVAVTKNPCLHP 776

Query: 277  GDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPRT 98
            GD+RVLEAV+DV+L+E  LVDC++FPQ G RPHPNECSGGDLDGD +FISWD+GL+P  T
Sbjct: 777  GDIRVLEAVYDVELEEKGLVDCIIFPQNGGRPHPNECSGGDLDGDQFFISWDEGLLPCHT 836

Query: 97   VTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
              PMDY G R RIM+H VTLEEIQ FF DYMI
Sbjct: 837  EAPMDYVGGRQRIMDHNVTLEEIQRFFVDYMI 868


>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
            gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
            polymerase 2 isoform 1 [Theobroma cacao]
            gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
            2 isoform 1 [Theobroma cacao] gi|508773407|gb|EOY20663.1|
            RNA-dependent RNA polymerase 2 isoform 1 [Theobroma
            cacao]
          Length = 1149

 Score =  929 bits (2400), Expect = 0.0
 Identities = 454/693 (65%), Positives = 561/693 (80%), Gaps = 6/693 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIEDS--- 1892
            P++++K+SGP IAS+   DRYHICKE++DFLWVRTTDFS  K++G  ++  WEI      
Sbjct: 190  PRIYQKVSGPNIASKLRPDRYHICKENFDFLWVRTTDFSRTKAVGQSTAFYWEINAELLT 249

Query: 1891 -DLYTSLPYYTKDVTELAFEGV-EFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
             DL++    Y +D+  L  +G  EF  A ++VP+VK  S+ ++AYEILFQLNSLVH QK+
Sbjct: 250  LDLFSCFSCYREDMKGLTLKGGGEFSSAPEIVPLVKGPSDSKLAYEILFQLNSLVHTQKI 309

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFI-ENVPSITTLIRKNLPSA 1541
            S+ASVD DL  IL  L ++ A++IL++ HKL STCY P SF+ EN+P ++    ++ P +
Sbjct: 310  SIASVDTDLIDILRVLAVETAVMILQKFHKLLSTCYNPVSFVKENLP-VSERNFQSRPLS 368

Query: 1540 ASEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRL 1361
            + + LI HN+MSCHR LVTPSKI+CLGPELE+SNY+VKNFA YASDF+RV+FV+EDWG+L
Sbjct: 369  SFKRLIDHNVMSCHRALVTPSKIYCLGPELETSNYVVKNFAEYASDFMRVSFVEEDWGKL 428

Query: 1360 SQGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFA 1181
            S  A+STS+  GIF+KP+RT IYHRILSVL+ GIVIG+KRFEFLAFSASQLRSNSVWMFA
Sbjct: 429  SANAISTSVQLGIFSKPFRTKIYHRILSVLQHGIVIGDKRFEFLAFSASQLRSNSVWMFA 488

Query: 1180 SNDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDG 1001
            SND V AED+REWMGCF  IRS+SKCAARMGQLFSSS+ TL V  +DV +IPDIEV SDG
Sbjct: 489  SNDKVTAEDVREWMGCFKKIRSVSKCAARMGQLFSSSLPTLVVPVQDVKIIPDIEVTSDG 548

Query: 1000 VKYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSM 821
            + YCFSDGIGKIS  FA ++ +  GL+  PSAFQIRYGGYKGV+AVDR+SFRK+SLR SM
Sbjct: 549  INYCFSDGIGKISLPFAREVAQKCGLNDTPSAFQIRYGGYKGVVAVDRNSFRKMSLRGSM 608

Query: 820  LKFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSK 641
             KFES   MLN+TKWSES PC+LNREI+TLLSTLG++D  F  +Q++QL  LG MLTN +
Sbjct: 609  HKFESKIRMLNVTKWSESMPCFLNREIVTLLSTLGIKDEAFETLQQEQLHLLGQMLTNRE 668

Query: 640  AALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKG 461
            AAL+VL+S  G D ++ + +MLLQGYEP  EPYL MML ++  + +SDL+ RCRI+VPKG
Sbjct: 669  AALDVLQSLCGADSQNILVKMLLQGYEPNVEPYLSMMLLANHVSLLSDLKCRCRIYVPKG 728

Query: 460  RVLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLH 281
            +VLVGCLDE+ TL YGQV+ R+++ KAELE  DQ FFH+VD+ TAI+ GKVVVTKNPCLH
Sbjct: 729  QVLVGCLDETATLNYGQVYVRLSIKKAELEHADQNFFHKVDEKTAIVIGKVVVTKNPCLH 788

Query: 280  PGDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPR 101
            PGDVRVLEAV++ +L++  LVDCLVFPQKG+RPHPNECSGGDLDGD +FISWDK L+P +
Sbjct: 789  PGDVRVLEAVYEAELEDKGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDLIPCQ 848

Query: 100  TVTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
            T  PMDYTG RPRIM+HEVTLEEIQ FF DYMI
Sbjct: 849  TDAPMDYTGSRPRIMDHEVTLEEIQKFFVDYMI 881


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  919 bits (2375), Expect = 0.0
 Identities = 450/692 (65%), Positives = 554/692 (80%), Gaps = 5/692 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIED---- 1895
            P++++K+SGP +AS+F+TDRYHICKE +DFLWVRTTDFS +KSIG  +S  WE       
Sbjct: 185  PRIYQKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSI 244

Query: 1894 SDLYTSLPYYTKDVTELAFEGV-EFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
            SD+ T LP Y +D+   + E   EF   S++VP+VK  S+ ++AYEILFQLN+LVH QK+
Sbjct: 245  SDMSTYLPCYREDIQSPSLEARREFSSPSEIVPLVKFPSDSKLAYEILFQLNALVHTQKI 304

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            S+A+VD DL  ILS L ++ A++IL+++  L S CY P SF++    + T     +P + 
Sbjct: 305  SIAAVDTDLIGILSGLPVETAVMILQKLRLLQSPCYNPVSFVK--AKLPTGKNYRIPLSV 362

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
            SE L  HN+MSC R L+TP+KI+CLGPELE++NY+VKNF  YASDF+RVTFV+EDW +LS
Sbjct: 363  SERLKNHNVMSCRRALITPTKIYCLGPELETANYVVKNFVEYASDFMRVTFVEEDWSKLS 422

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
              A+ST +  G+F++P++T IY RIL VL++GIVIG+KRFEFLAFSASQLRSNSVWMFAS
Sbjct: 423  ANAISTGVHLGVFSRPFKTKIYDRILYVLQNGIVIGDKRFEFLAFSASQLRSNSVWMFAS 482

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            ND VKAEDIREWMGCF  IRSISKCA+RMGQLFSSSM TL V  +DV++I DIEV +DG+
Sbjct: 483  NDEVKAEDIREWMGCFKKIRSISKCASRMGQLFSSSMPTLVVPVQDVEIIDDIEVKTDGI 542

Query: 997  KYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSML 818
             YCFSDGIGKIS  FA ++    GL+H+PSAFQIRYGGYKGV+AVDR+SF K+SLR SML
Sbjct: 543  NYCFSDGIGKISLPFARQVAEKCGLNHIPSAFQIRYGGYKGVVAVDRNSFWKMSLRDSML 602

Query: 817  KFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKA 638
            KFES   MLN+TKWSES PC+LNREI+TL STLG++D VF  MQE+QL  LG MLTN +A
Sbjct: 603  KFESKVRMLNVTKWSESMPCFLNREIVTLFSTLGIKDEVFERMQEEQLCLLGKMLTNREA 662

Query: 637  ALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGR 458
            AL+ L+S GG + K+ +  M LQ YEP  +PYL MMLQ+H EN +SDL+SRCRIFVPKGR
Sbjct: 663  ALDTLQSLGGVNSKNILVEM-LQFYEPNVQPYLSMMLQAHYENLLSDLKSRCRIFVPKGR 721

Query: 457  VLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLHP 278
            +L+GCLDE+GTL YGQV+  + M KAELE  DQ +F +VD+ TAI+ GKVVVTKNPCLHP
Sbjct: 722  ILIGCLDETGTLNYGQVYLCIKMKKAELECADQSYFRKVDEETAIVIGKVVVTKNPCLHP 781

Query: 277  GDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPRT 98
            GDVRVLEAV++ +L+E  LVDCLVFPQKG+RPHPNECSGGDLDGD +FISWDK L+P +T
Sbjct: 782  GDVRVLEAVYEPQLEEKGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDLIPCQT 841

Query: 97   VTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
              PMDYTGRRPRIM+HEVTLEEIQ FF DYMI
Sbjct: 842  EPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMI 873


>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  917 bits (2371), Expect = 0.0
 Identities = 449/692 (64%), Positives = 555/692 (80%), Gaps = 5/692 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIED---- 1895
            P+ ++K+SGP +AS+F+TDRYHICKE +DFLWVRTTDFS +KSIG  +S  WE       
Sbjct: 185  PRTYRKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSI 244

Query: 1894 SDLYTSLPYYTKDVTELAFEGV-EFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
            SD+ T LP Y +D+   + E   EF   S++VP+VK  S+ ++AYEILFQLN+LVH QK+
Sbjct: 245  SDMSTYLPCYREDIQSPSLEARGEFSSPSEIVPLVKFPSDSKLAYEILFQLNALVHTQKI 304

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            S+A+VD DL  ILS L ++ A++IL+++  L S CY P SF++    + T     +P + 
Sbjct: 305  SIAAVDTDLIGILSVLPVETAVMILQKLRLLQSPCYNPVSFVK--AKLPTGKNFRIPLSV 362

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
            SE L  HN+MSCHR L+TP+KI+CLGPELE++NY+VKNFA YASDF+RVTFV+EDW +LS
Sbjct: 363  SERLKNHNVMSCHRALITPTKIYCLGPELETANYVVKNFAEYASDFMRVTFVEEDWSKLS 422

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
              A+ST +  G+F++P++T IY RILS+L++GIVIG+KRF+FLAFSASQLRSNSVWMFAS
Sbjct: 423  ANAISTGVHLGVFSRPFKTKIYDRILSILQNGIVIGDKRFKFLAFSASQLRSNSVWMFAS 482

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            ND VKAEDIREWMGCF  IRSISKCA+RMGQLFSSSM TL V  +DV++I DIEV +DG+
Sbjct: 483  NDEVKAEDIREWMGCFKKIRSISKCASRMGQLFSSSMPTLVVPVQDVEIIDDIEVKTDGI 542

Query: 997  KYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSML 818
             YCFSDGIGKIS  FA ++    GL+H+PSAFQIRYGGYKGV+AVDR+SF K+SLR SML
Sbjct: 543  NYCFSDGIGKISLPFARQVAEKCGLNHIPSAFQIRYGGYKGVVAVDRNSFWKMSLRDSML 602

Query: 817  KFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKA 638
            KFES   MLN+TKWSES PC+LNREI+TL STLG++D VF  MQE+QL  LG MLTN +A
Sbjct: 603  KFESKVRMLNVTKWSESMPCFLNREIVTLFSTLGIKDEVFERMQEEQLCLLGKMLTNREA 662

Query: 637  ALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGR 458
            AL+ L+S GG + K+ +  M LQ  EP  +PYL MMLQ+H EN +SDL+SRCRIFVPKGR
Sbjct: 663  ALDTLQSLGGVNSKNILVEM-LQFDEPNVQPYLSMMLQAHYENLLSDLKSRCRIFVPKGR 721

Query: 457  VLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLHP 278
            +L+GCLDE+GTL YGQV+  + M KAELE  DQ +F +VD+ TAI+ GKVVVTKNPCLHP
Sbjct: 722  ILIGCLDETGTLNYGQVYLCIKMKKAELECADQSYFRKVDEETAIVIGKVVVTKNPCLHP 781

Query: 277  GDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPRT 98
            GDVRVLEAV++ +L+E  LVDCLVFP+KG+RPHPNECSGGDLDGD +FISWDK L+P +T
Sbjct: 782  GDVRVLEAVYEPQLEEKGLVDCLVFPEKGERPHPNECSGGDLDGDQFFISWDKDLIPCQT 841

Query: 97   VTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
              PMDYTGRRPRIM+HEVTLEEIQ FF DYMI
Sbjct: 842  EPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMI 873


>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
          Length = 1122

 Score =  917 bits (2369), Expect = 0.0
 Identities = 443/695 (63%), Positives = 562/695 (80%), Gaps = 8/695 (1%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIE----D 1895
            P++++++ GP ++++F  DRY  CKED+ F+WVRTTDFS +KSIG+ +S CWEIE    D
Sbjct: 185  PRIYQRMEGPNVSAKFKADRYRFCKEDFAFMWVRTTDFSRLKSIGHSTSFCWEIEEESSD 244

Query: 1894 SDLYTSLPYYTKDVTELAFE-GVEFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
            SD++ S P Y +++ +L+ E G EF   ++ VP+VK   + ++ YE LFQLNSLVH QK+
Sbjct: 245  SDVFRSFPLYRENLKDLSLEDGEEFCSPTETVPLVKCRLDTKLPYEALFQLNSLVHTQKI 304

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            SLASVD +L  +++ LD +   +I +++HK+ STCY P  F++    + ++ +K+L  ++
Sbjct: 305  SLASVDDELIDLIASLDDETKAVIFQKLHKMSSTCYEPLRFVKTQLHVLSIKKKSLRPSS 364

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
             + L  +NIMSCHR L+TPSKI+CLGPELE+SN++VK+FASYASDF+R+TFV+EDW +L 
Sbjct: 365  QKRLADNNIMSCHRALITPSKIYCLGPELETSNHVVKHFASYASDFMRITFVEEDWSKLP 424

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
              AVSTS+ KGIFAKP+RTDIY R+L++LRDGIVIG KRFEFLAFSASQLRSNSVW+FAS
Sbjct: 425  INAVSTSLQKGIFAKPFRTDIYKRVLTILRDGIVIGSKRFEFLAFSASQLRSNSVWLFAS 484

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            ND VKAEDIREWMG F++IRS+SKCAARMGQLFSSS QT E+ P+DVD+IPDIE+ SDG+
Sbjct: 485  NDKVKAEDIREWMGSFTNIRSVSKCAARMGQLFSSSKQTFEMAPQDVDIIPDIELTSDGI 544

Query: 997  KYCFSDGIGKISYAFASKIVRMLGL--SHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSS 824
             YCFSDGIGKIS +FA ++ + L L  S +PSAFQIRYGGYKGVIAVDRHSFRKLS+R+S
Sbjct: 545  NYCFSDGIGKISLSFAKQLAQKLKLDQSRIPSAFQIRYGGYKGVIAVDRHSFRKLSMRNS 604

Query: 823  MLKFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNS 644
            MLKFES N ML +TKWSES PC+LNREII+LLSTLGV+D   L MQE+QLQ LG MLT+ 
Sbjct: 605  MLKFESKNRMLCVTKWSESMPCFLNREIISLLSTLGVKDEALLAMQEEQLQLLGKMLTDR 664

Query: 643  KAALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPK 464
            +AAL+VLES  G D +S + +ML   YEP +EPYL MML++H   Q+SDL+SRCRIFVPK
Sbjct: 665  EAALDVLESLSGADSRSILVKMLNGFYEPNSEPYLSMMLKAHYAYQLSDLKSRCRIFVPK 724

Query: 463  GRVLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFH-RVDKTTAILRGKVVVTKNPC 287
            GRVL+GCLDE+G L YGQVF R+T+ K + + GD+   +   D +T I+ GKVVVTKNPC
Sbjct: 725  GRVLIGCLDETGILNYGQVFVRITVTKTKEKIGDENLQNVDGDDSTRIIVGKVVVTKNPC 784

Query: 286  LHPGDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVP 107
            LHPGD+RVL+A+++ +L+E  L DCLVFPQKG RPHPNECSGGDLDGDL+FISWDK L+P
Sbjct: 785  LHPGDIRVLDAIYNEELEEKGLRDCLVFPQKGPRPHPNECSGGDLDGDLFFISWDKDLIP 844

Query: 106  PRTVTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
            P+T  PMDYTGRRPRIM+H+VTLEEI  FF DYMI
Sbjct: 845  PQTDNPMDYTGRRPRIMDHKVTLEEIHQFFVDYMI 879


>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
            gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
            2 [Cucumis sativus]
          Length = 1117

 Score =  917 bits (2369), Expect = 0.0
 Identities = 443/692 (64%), Positives = 556/692 (80%), Gaps = 5/692 (0%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIED---- 1895
            P+++KKISG  +ASRF++ RY +C EDYD+LWVRTT+FS M+S+G  +S CWE+E+    
Sbjct: 183  PRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQA 242

Query: 1894 SDLYTSLPYYTKDVTELAFE-GVEFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
            SD+++  P+Y +   ++  E G EF   S++VP++K+     +AYE+ +QLNSLVH QK+
Sbjct: 243  SDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQKI 302

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            SL++ + DL   L  LD+D AL +L+ +H+L   CY P SF++    +     K+LP ++
Sbjct: 303  SLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPPSS 362

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
             + L  +N+M+C+RVLVTPS+I+CLGPELE+SNY+VKNF+SYASDF+RVTFV+EDW +L 
Sbjct: 363  QKRL-SNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKLP 421

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
             GAV+TSI +GI +KPYRT+IYHRI++VLRDGIVIG KRFEFLAFSASQLRSNSVWMFAS
Sbjct: 422  AGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFAS 481

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            +D++KAE+IR+WMGCF  IRSISKCAARMGQLFSSS QTL V  RDV++IPDIEV +DG+
Sbjct: 482  SDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGI 541

Query: 997  KYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSML 818
             YCFSDGIGKIS +FA ++    G++H+PSAFQIRYGGYKGVIAVDR+SFRKLSLR SML
Sbjct: 542  DYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSML 601

Query: 817  KFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKA 638
            KFES N MLN+TK  +S PCYLNREI TLLSTLGV+D  F  +Q++QL  L  MLT+   
Sbjct: 602  KFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKDV 661

Query: 637  ALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGR 458
            ALNVLE+  G D  + + +ML  GYEP  EPYL MMLQ+H  N  SDLRSRCRIFVPKGR
Sbjct: 662  ALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGR 721

Query: 457  VLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRVDKTTAILRGKVVVTKNPCLHP 278
            +L+GCLDE+G L YGQV+A +T+ K+EL+S +Q +FH +D+T +IL GKVVVTKNPCLHP
Sbjct: 722  ILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSILLGKVVVTKNPCLHP 781

Query: 277  GDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPPRT 98
            GDVRVLEA+F V+L+E  LVDCL+FPQKG RPH NECSGGDLDGDLYFISWD+ L+PP+T
Sbjct: 782  GDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPKT 841

Query: 97   VTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
              PMDYTGRRPRIM+H+V LEEIQ FF DYMI
Sbjct: 842  EAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMI 873


>ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X2 [Glycine
            max]
          Length = 941

 Score =  906 bits (2341), Expect = 0.0
 Identities = 441/694 (63%), Positives = 553/694 (79%), Gaps = 7/694 (1%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIEDS--- 1892
            P+++KK +G  +A++F  DRY  CKED++FLWVRTTDFS +KSIG+ +S CWEI +    
Sbjct: 5    PRIYKKKTGADVAAKFRGDRYRFCKEDFEFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLA 64

Query: 1891 -DLYTSLPYYTKDVTELAFE-GVEFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
             D++ S P Y +++ +LA E G EF  +++ VP+VK +S+ ++ YE LFQLNSLVH QK+
Sbjct: 65   LDVFKSFPLYKENLRDLALEDGEEFCSSTEAVPLVKRASQSKLPYEALFQLNSLVHTQKI 124

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            SLASVD +L  +L+ LD +   +I  ++HK+  TCY P  F++    + +  +K LP ++
Sbjct: 125  SLASVDDELIDLLAGLDEETRAVIFLKLHKMSFTCYEPLKFVKTQLHVLSNKKKGLPQSS 184

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
             + L   NIMSCHR L+TP+KI+CLGPELE+SN++VK+FAS+ASDF+R+TFV+E+W +L 
Sbjct: 185  QKRLTDSNIMSCHRALITPTKIYCLGPELETSNHVVKHFASHASDFMRITFVEENWNKLP 244

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
              AVST + KG+F+KP +T+IY RIL++LRDGIVIG KRFEFLAFSASQLRSNSVW+FAS
Sbjct: 245  TNAVSTGVQKGLFSKPLKTEIYKRILTILRDGIVIGSKRFEFLAFSASQLRSNSVWLFAS 304

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            ND++KA DIREWMGCF++IRS+SKCAARMGQLFSSSMQT EV  +DV++IPD+EV+SDGV
Sbjct: 305  NDNLKAADIREWMGCFNNIRSVSKCAARMGQLFSSSMQTFEVVSQDVEIIPDVEVISDGV 364

Query: 997  KYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSML 818
             YCFSDGIGKIS +FA ++ + L L H PSAFQIRYGG+KGVIAVDR SFRKLSLRSSML
Sbjct: 365  SYCFSDGIGKISQSFARQVAQKLKLDHTPSAFQIRYGGFKGVIAVDRRSFRKLSLRSSML 424

Query: 817  KFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKA 638
            KFES N ML +TKWSES PC+LNREII+LLSTLGV+D V L MQ  QL  LG MLT+SKA
Sbjct: 425  KFESKNSMLCVTKWSESMPCFLNREIISLLSTLGVKDEVLLAMQHDQLDLLGRMLTDSKA 484

Query: 637  ALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGR 458
            AL VLES  G D KS + +ML +  EP +EPYL MML+++   Q+SDL+SRCRIFVPKGR
Sbjct: 485  ALEVLESLNGADSKSILVKMLHEFNEPNSEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGR 544

Query: 457  VLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRV--DKTTAILRGKVVVTKNPCL 284
            VLVGCLDE+G L YGQVF R+T+ K   + GD+    +V  D  T I+ GKVVVTKNPCL
Sbjct: 545  VLVGCLDETGLLNYGQVFVRITVTKTREKFGDEN-LRKVDGDDNTCIIVGKVVVTKNPCL 603

Query: 283  HPGDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPP 104
            HPGD+RVL+A++  +L+E  L DCLVFPQKG RPHPNECSGGDLDGDL+FISWDK L+P 
Sbjct: 604  HPGDIRVLDAIYSEELEEKGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFISWDKDLIPC 663

Query: 103  RTVTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
            +T  PMDYTGRRPRIM+H+VTLEEIQ FF DYMI
Sbjct: 664  QTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMI 697


>ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine
            max]
          Length = 1121

 Score =  906 bits (2341), Expect = 0.0
 Identities = 441/694 (63%), Positives = 553/694 (79%), Gaps = 7/694 (1%)
 Frame = -2

Query: 2062 PKVFKKISGPKIASRFTTDRYHICKEDYDFLWVRTTDFSSMKSIGYLSSLCWEIEDS--- 1892
            P+++KK +G  +A++F  DRY  CKED++FLWVRTTDFS +KSIG+ +S CWEI +    
Sbjct: 185  PRIYKKKTGADVAAKFRGDRYRFCKEDFEFLWVRTTDFSPLKSIGHSTSFCWEIVEEHLA 244

Query: 1891 -DLYTSLPYYTKDVTELAFE-GVEFDHASDLVPIVKNSSEFEVAYEILFQLNSLVHAQKL 1718
             D++ S P Y +++ +LA E G EF  +++ VP+VK +S+ ++ YE LFQLNSLVH QK+
Sbjct: 245  LDVFKSFPLYKENLRDLALEDGEEFCSSTEAVPLVKRASQSKLPYEALFQLNSLVHTQKI 304

Query: 1717 SLASVDADLFQILSRLDMDKALLILKEMHKLHSTCYYPKSFIENVPSITTLIRKNLPSAA 1538
            SLASVD +L  +L+ LD +   +I  ++HK+  TCY P  F++    + +  +K LP ++
Sbjct: 305  SLASVDDELIDLLAGLDEETRAVIFLKLHKMSFTCYEPLKFVKTQLHVLSNKKKGLPQSS 364

Query: 1537 SEMLIKHNIMSCHRVLVTPSKIFCLGPELESSNYIVKNFASYASDFLRVTFVDEDWGRLS 1358
             + L   NIMSCHR L+TP+KI+CLGPELE+SN++VK+FAS+ASDF+R+TFV+E+W +L 
Sbjct: 365  QKRLTDSNIMSCHRALITPTKIYCLGPELETSNHVVKHFASHASDFMRITFVEENWNKLP 424

Query: 1357 QGAVSTSIMKGIFAKPYRTDIYHRILSVLRDGIVIGEKRFEFLAFSASQLRSNSVWMFAS 1178
              AVST + KG+F+KP +T+IY RIL++LRDGIVIG KRFEFLAFSASQLRSNSVW+FAS
Sbjct: 425  TNAVSTGVQKGLFSKPLKTEIYKRILTILRDGIVIGSKRFEFLAFSASQLRSNSVWLFAS 484

Query: 1177 NDHVKAEDIREWMGCFSHIRSISKCAARMGQLFSSSMQTLEVKPRDVDLIPDIEVVSDGV 998
            ND++KA DIREWMGCF++IRS+SKCAARMGQLFSSSMQT EV  +DV++IPD+EV+SDGV
Sbjct: 485  NDNLKAADIREWMGCFNNIRSVSKCAARMGQLFSSSMQTFEVVSQDVEIIPDVEVISDGV 544

Query: 997  KYCFSDGIGKISYAFASKIVRMLGLSHMPSAFQIRYGGYKGVIAVDRHSFRKLSLRSSML 818
             YCFSDGIGKIS +FA ++ + L L H PSAFQIRYGG+KGVIAVDR SFRKLSLRSSML
Sbjct: 545  SYCFSDGIGKISQSFARQVAQKLKLDHTPSAFQIRYGGFKGVIAVDRRSFRKLSLRSSML 604

Query: 817  KFESPNCMLNITKWSESQPCYLNREIITLLSTLGVEDRVFLEMQEQQLQHLGTMLTNSKA 638
            KFES N ML +TKWSES PC+LNREII+LLSTLGV+D V L MQ  QL  LG MLT+SKA
Sbjct: 605  KFESKNSMLCVTKWSESMPCFLNREIISLLSTLGVKDEVLLAMQHDQLDLLGRMLTDSKA 664

Query: 637  ALNVLESTGGGDMKSFMARMLLQGYEPKNEPYLLMMLQSHLENQISDLRSRCRIFVPKGR 458
            AL VLES  G D KS + +ML +  EP +EPYL MML+++   Q+SDL+SRCRIFVPKGR
Sbjct: 665  ALEVLESLNGADSKSILVKMLHEFNEPNSEPYLSMMLKAYYAYQLSDLKSRCRIFVPKGR 724

Query: 457  VLVGCLDESGTLEYGQVFARVTMNKAELESGDQPFFHRV--DKTTAILRGKVVVTKNPCL 284
            VLVGCLDE+G L YGQVF R+T+ K   + GD+    +V  D  T I+ GKVVVTKNPCL
Sbjct: 725  VLVGCLDETGLLNYGQVFVRITVTKTREKFGDEN-LRKVDGDDNTCIIVGKVVVTKNPCL 783

Query: 283  HPGDVRVLEAVFDVKLQEDNLVDCLVFPQKGDRPHPNECSGGDLDGDLYFISWDKGLVPP 104
            HPGD+RVL+A++  +L+E  L DCLVFPQKG RPHPNECSGGDLDGDL+FISWDK L+P 
Sbjct: 784  HPGDIRVLDAIYSEELEEKGLRDCLVFPQKGHRPHPNECSGGDLDGDLFFISWDKDLIPC 843

Query: 103  RTVTPMDYTGRRPRIMNHEVTLEEIQTFFADYMI 2
            +T  PMDYTGRRPRIM+H+VTLEEIQ FF DYMI
Sbjct: 844  QTEAPMDYTGRRPRIMDHKVTLEEIQQFFVDYMI 877