BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00012538
         (2589 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle...   200   2e-48
ref|NP_861409.1| putative capsid protein [Cestrum yellow leaf cu...   172   9e-40
dbj|BAO53392.1| capsid protein [Cauliflower mosaic virus] gi|591...   129   5e-27
dbj|BAO53385.1| capsid protein [Cauliflower mosaic virus]             129   5e-27
ref|NP_056727.1| capsid protein [Cauliflower mosaic virus] gi|11...   129   5e-27
ref|XP_003614350.1| Capsid protein, partial [Medicago truncatula...   129   5e-27
gb|AAA21735.1| capsid protein [Cauliflower mosaic virus]              127   3e-26
gb|AGT42181.1| coat protein [Cauliflower mosaic virus] gi|591288...   127   3e-26
gb|AGT42167.1| coat protein [Cauliflower mosaic virus] gi|591288...   126   4e-26
dbj|BAO53546.1| capsid protein [Cauliflower mosaic virus]             125   7e-26
emb|CCK73154.1| coat protein, partial [Cauliflower mosaic virus]...   125   7e-26
dbj|BAO53588.1| capsid protein [Cauliflower mosaic virus]             125   1e-25
dbj|BAO53567.1| capsid protein [Cauliflower mosaic virus]             125   1e-25
dbj|BAO53560.1| capsid protein [Cauliflower mosaic virus]             125   1e-25
dbj|BAO53364.1| capsid protein [Cauliflower mosaic virus]             125   1e-25
dbj|BAO53665.1| capsid protein [Cauliflower mosaic virus]             125   1e-25
dbj|BAO53658.1| capsid protein [Cauliflower mosaic virus]             125   1e-25
dbj|BAO53644.1| capsid protein [Cauliflower mosaic virus]             125   1e-25
dbj|BAO53637.1| capsid protein [Cauliflower mosaic virus]             125   1e-25
dbj|BAO53553.1| capsid protein [Cauliflower mosaic virus]             125   1e-25

>ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle virus]
            gi|18266819|sp|P15627.2|CAPSD_SOCMV RecName: Full=Capsid
            protein; Short=CP; AltName: Full=Coat protein
            gi|11322952|emb|CAC16944.1| putative coat protein
            [Soybean chlorotic mottle virus]
          Length = 441

 Score =  200 bits (509), Expect = 2e-48
 Identities = 121/342 (35%), Positives = 176/342 (51%), Gaps = 9/342 (2%)
 Frame = -1

Query: 1251 TENSYRNIPSQYIPKYQTNTDM--LDIDCNEDTLKNILEWGNKTALIVATNKDDFGKLSA 1078
            T   Y+ IP +Y+P +QT + +  LDIDC  +T K I EW N  ++++  N ++   LS+
Sbjct: 87   TRFKYQKIPKEYVPAHQTTSTIGVLDIDCVANTEKIIKEWFNHHSILITIN-EELKNLSS 145

Query: 1077 EEIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKEFVG--QQ 904
             + F ++ ++ +GIA  +L  L  +   LS I     D  +V + V  L+++EFVG  ++
Sbjct: 146  LDTFYYLVYKTRGIAHAYLSNLPSEV--LSRI---PADRKQVDDWVYNLLLREFVGRLER 200

Query: 903  VENNTELERNAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRH--LYDDIFFNKLPD 730
             E+     +N  Y L NL ICNMCY   ++CEFQ  YY I+  +R     D + + KLP+
Sbjct: 201  PESEEAFSQNNYYKLINLEICNMCYLENFLCEFQSRYYGINPIDRENLKVDLLLYAKLPE 260

Query: 729  AVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKLYCPSNNPE 550
             V   V+ YF   +      +TLGGRI ALK W T QCN++  ++Q  V    C S   +
Sbjct: 261  YVRTQVEAYFNASITSNKLDNTLGGRITALKLWQTEQCNQKLAKRQASVG--LCCSKIED 318

Query: 549  KIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQ---FKKYTKKNDKYCPQDK 379
            KIG YGC                                K+    KK   +  + CP  K
Sbjct: 319  KIGKYGCRKSNPRAKKPKKKFRKIKKYPKKNFWKWNNQRKKKTFRKKRPFRKQQTCPTGK 378

Query: 378  KDCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            K C+CWLC E GHYAN+CP KK NKK + L + +  G EP+E
Sbjct: 379  KKCQCWLCHEEGHYANECP-KKDNKKAQTLKLIFDLGFEPVE 419


>ref|NP_861409.1| putative capsid protein [Cestrum yellow leaf curling virus]
            gi|81991105|sp|Q7TD09.1|CAPSD_CYLCV RecName: Full=Capsid
            protein; Short=CP; AltName: Full=coat protein
            gi|32305281|gb|AAP78923.1| putative capsid protein
            [Cestrum yellow leaf curling virus]
          Length = 501

 Score =  172 bits (435), Expect = 9e-40
 Identities = 106/352 (30%), Positives = 167/352 (47%), Gaps = 14/352 (3%)
 Frame = -1

Query: 1239 YRNIPSQYIPKYQT-NTDMLDIDCNEDTLKNILEWGNKTALIVATNKDDFGKLSAEEIFN 1063
            Y  IP +Y P +Q  N+ +L++DC ++     + W +K  L +  NK  F   S  EI+N
Sbjct: 133  YSKIPKEYKPIHQDENSSILNLDCIDNAPALFVSWTSKHGLELQLNKH-FENFSDNEIWN 191

Query: 1062 FITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKEFVGQQVEN---- 895
            +  +  +G   +FL   D + D    + L +  P+   + + + +  EF+G+ + +    
Sbjct: 192  YTQYYTRGSVQKFLSEQDYQTDVAPNLALVQGGPYAKFKYIVQTIYGEFIGKDIRDHSQD 251

Query: 894  --NTELERNAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDDIFFNKLPDAVS 721
              N E E+ A +HL N+ IC++CY+  Y CE++KY+Y ++ D R  Y ++F  KLP    
Sbjct: 252  LINQEAEK-ARFHLANMIICDLCYFDNYTCEYRKYFYMLTPDERSTYIELFLQKLPAPFG 310

Query: 720  NTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKLYCPSNNPEKIG 541
              + + F+    E    +TLGG I  +++ +  +C +   R+    A   C   NPE   
Sbjct: 311  RKMMEGFRKETAENKIANTLGGAIDIVRRTIDEECIQRSYRRTIGGAVKICCKGNPEIPQ 370

Query: 540  NYGC-EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKN---DKYCPQDKKD 373
             YGC +                               + F K  K+N    K+CP  KK 
Sbjct: 371  RYGCYDITKRKKTSKKKWKKRSYKPDLWKKKKRFFKRRDFSKKKKENPGKKKFCPTGKKS 430

Query: 372  CKCWLCEEIGHYANKCPNK---KGNKKTEFLNIAYKTGLEPIEVFEEISDSE 226
            CKCW+C E GHYAN+CP K   K   K + L  A + G EP+E   E SD E
Sbjct: 431  CKCWICHEEGHYANECPKKTKEKHKDKVKLLMEAEEEGFEPLE--SEASDIE 480


>dbj|BAO53392.1| capsid protein [Cauliflower mosaic virus]
            gi|591288585|dbj|BAO53399.1| capsid protein [Cauliflower
            mosaic virus]
          Length = 489

 Score =  129 bits (325), Expect = 5e-27
 Identities = 95/349 (27%), Positives = 157/349 (44%), Gaps = 7/349 (2%)
 Frame = -1

Query: 1278 YPYSQGKIPTENSYRNIPSQYIPKYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKD 1099
            Y   + K P +  +   P     + QT+  ML+IDC  +    I +W  +  LIV TN++
Sbjct: 119  YNERKRKTPEDRYFPTQPKTIPGQKQTSMGMLNIDCQTNRRTLIDDWAAEIGLIVKTNRE 178

Query: 1098 DFGKLSAEEIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKE 919
            D+  L  E I   +  +  GIA + +          +T + R T    ++EQV   M   
Sbjct: 179  DY--LDPETILLLMEHKTSGIAKELI---------RNTRWNRTTGD--ILEQVIDAMYTM 225

Query: 918  FVGQQVENNTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDD 754
            F+G    +N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y +
Sbjct: 226  FLGLNYSDNKVAEKIDEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYIN 285

Query: 753  IFFNKLPDAVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKL 574
             + +K+P  +       F+   N G +  +LG     +K+ ++  C+  K +++ +    
Sbjct: 286  QYLSKIP-IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFSK 343

Query: 573  YCPSNNPEKIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK- 397
             C S   E    YGC+                               K FK   KK  K 
Sbjct: 344  KCCSIG-EASAEYGCKKTSTKKYHKKRYRKKYKAYKPYKKKKKFRSGKYFKPKEKKGSKQ 402

Query: 396  -YCPQDKKDCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
             YCP+ KKDC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 403  KYCPKGKKDCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 451


>dbj|BAO53385.1| capsid protein [Cauliflower mosaic virus]
          Length = 488

 Score =  129 bits (325), Expect = 5e-27
 Identities = 95/349 (27%), Positives = 157/349 (44%), Gaps = 7/349 (2%)
 Frame = -1

Query: 1278 YPYSQGKIPTENSYRNIPSQYIPKYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKD 1099
            Y   + K P +  +   P     + QT+  ML+IDC  +    I +W  +  LIV TN++
Sbjct: 118  YNERKRKTPEDRYFPTQPKTIPGQKQTSMGMLNIDCQTNRRTLIDDWAAEIGLIVKTNRE 177

Query: 1098 DFGKLSAEEIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKE 919
            D+  L  E I   +  +  GIA + +          +T + R T    ++EQV   M   
Sbjct: 178  DY--LDPETILLLMEHKTSGIAKELI---------RNTRWNRTTGD--ILEQVIDAMYTM 224

Query: 918  FVGQQVENNTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDD 754
            F+G    +N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y +
Sbjct: 225  FLGLNYSDNKVAEKIDEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYIN 284

Query: 753  IFFNKLPDAVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKL 574
             + +K+P  +       F+   N G +  +LG     +K+ ++  C+  K +++ +    
Sbjct: 285  QYLSKIP-IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFSK 342

Query: 573  YCPSNNPEKIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKN--D 400
             C S   E    YGC+                               K FK   KK    
Sbjct: 343  KCCSIG-EASAEYGCKKTSTKKYHKKRYRKKYKAYKPYKKKKKFRSGKYFKPKEKKGLKQ 401

Query: 399  KYCPQDKKDCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            KYCP+ KKDC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 402  KYCPKGKKDCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 450


>ref|NP_056727.1| capsid protein [Cauliflower mosaic virus]
            gi|116719|sp|P03542.1|CAPSD_CAMVS RecName: Full=Capsid
            protein; Short=CP; AltName: Full=Coat protein
            gi|58825|emb|CAA23459.1| unnamed protein product
            [Cauliflower mosaic virus]
          Length = 489

 Score =  129 bits (325), Expect = 5e-27
 Identities = 95/349 (27%), Positives = 157/349 (44%), Gaps = 7/349 (2%)
 Frame = -1

Query: 1278 YPYSQGKIPTENSYRNIPSQYIPKYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKD 1099
            Y   + K P +  +   P     + QT+  ML+IDC  +    I +W  +  LIV TN++
Sbjct: 119  YNERKRKTPEDRYFPTQPKTIPGQKQTSMGMLNIDCQTNRRTLIDDWAAEIGLIVKTNRE 178

Query: 1098 DFGKLSAEEIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKE 919
            D+  L  E I   +  +  GIA + +          +T + R T    ++EQV   M   
Sbjct: 179  DY--LDPETILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVIDAMYTM 225

Query: 918  FVGQQVENNTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDD 754
            F+G    +N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y +
Sbjct: 226  FLGLNYSDNKVAEKIDEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYIN 285

Query: 753  IFFNKLPDAVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKL 574
             + +K+P  +       F+   N G +  +LG     +K+ ++  C+  K +++ +    
Sbjct: 286  QYLSKIP-IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNK 343

Query: 573  YCPSNNPEKIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK- 397
             C S   E    YGC+                               K FK   KK  K 
Sbjct: 344  KCCSIG-EASTEYGCKKTSTKKYHKKRYKKKYKAYKPYKKKKKFRSGKYFKPKEKKGSKQ 402

Query: 396  -YCPQDKKDCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
             YCP+ KKDC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 403  KYCPKGKKDCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 451


>ref|XP_003614350.1| Capsid protein, partial [Medicago truncatula]
            gi|355515685|gb|AES97308.1| Capsid protein, partial
            [Medicago truncatula]
          Length = 420

 Score =  129 bits (325), Expect = 5e-27
 Identities = 95/341 (27%), Positives = 150/341 (43%), Gaps = 4/341 (1%)
 Frame = -1

Query: 1323 NLIMNIKGHIRQNWNYPYSQGKIPTENSYRNIPSQYIPKYQTNTD--MLDIDCNEDTLKN 1150
            N  MN +G+ R N               +  I  ++ P Y+      +L++DC  +  + 
Sbjct: 112  NETMNRRGYTRAN-------------GKWTKISDEFKPHYEEGKSKKLLNLDCVRNPEEI 158

Query: 1149 ILEWGNKTALIVATNKDDFGKLSAEEIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRE 970
            +  W N   +++AT+ + F K    + +  IT   +  A + ++GL            +E
Sbjct: 159  LERWSNNMIMLLATD-ERFSKDETWQQYARITENNQQFA-KLIIGL----------IYKE 206

Query: 969  TDPFKVVEQVEKLMIKEFVGQQVENNTELERNAIYHLTNLRICNMCYYPQYICEFQKYYY 790
               F ++E   K+            N  L   A  HL N++ICNMC    +ICEF+KYYY
Sbjct: 207  FIGFNILEHKAKV------------NKRLRERAEAHLNNMQICNMCEIDSFICEFKKYYY 254

Query: 789  QISHDNRHLYDDIFFNKLPDAVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQC-N 613
             +    + +Y +IF +KLP  +S ++++ +++   E G   TL G I  L + + NQC  
Sbjct: 255  DLDRKTQLIYTNIFISKLPYPLSTSIREKWKSRPEELG--DTLAGVIQILYEEIRNQCLE 312

Query: 612  KEKIRQ-QTQVAKLYCPSNNPEKIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 436
            +EKI+        L C   + +  GNYGC                               
Sbjct: 313  REKIKNLNLGSTSLCCNKLDLDLPGNYGCS---KRSRKNPRRKPRLRKTYPKKRANKNTK 369

Query: 435  XKQFKKYTKKNDKYCPQDKKDCKCWLCEEIGHYANKCPNKK 313
             K F+K  +   KYCP+ KK C CW+C   GHYAN+CP KK
Sbjct: 370  KKYFRKKRQTPRKYCPKGKKKCVCWICNVEGHYANECPKKK 410


>gb|AAA21735.1| capsid protein [Cauliflower mosaic virus]
          Length = 489

 Score =  127 bits (319), Expect = 3e-26
 Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 8/341 (2%)
 Frame = -1

Query: 1251 TENSYRNIPSQYIP-KYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKDDFGKLSAE 1075
            TE  Y     + IP + QT+  ML+IDC  +    I +W  +  LIV TN++D+  L  E
Sbjct: 126  TEGRYFPTQPKTIPGQKQTSMGMLNIDCQTNRRTLIDDWAAEIGLIVKTNREDY--LDPE 183

Query: 1074 EIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKEFVGQQVEN 895
             I   +  +  GI  + +          +T + R T    ++EQV   M   F+G    +
Sbjct: 184  TILLLMEHKTSGIPKELI---------RNTRWNRTTGD--IIEQVIDAMYTMFLGLNYSD 232

Query: 894  NTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDDIFFNKLPD 730
            N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y + + +K+P 
Sbjct: 233  NKVAEKIDEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIP- 291

Query: 729  AVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKLYCPSNNPE 550
             +       F+   N G +  +LG     +K+ ++  C+  K +++ +     C S   E
Sbjct: 292  IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIG-E 349

Query: 549  KIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK--YCPQDKK 376
                YGC+                               K FK   KK  K  YCP+ KK
Sbjct: 350  ASAEYGCKKTSTKKYHKKRYKKKYKVYKPYKKKKKFRSGKYFKPKEKKGSKQKYCPKGKK 409

Query: 375  DCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            DC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 410  DCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 450


>gb|AGT42181.1| coat protein [Cauliflower mosaic virus] gi|591288441|dbj|BAO53273.1|
            capsid protein [Cauliflower mosaic virus]
          Length = 489

 Score =  127 bits (318), Expect = 3e-26
 Identities = 96/341 (28%), Positives = 154/341 (45%), Gaps = 8/341 (2%)
 Frame = -1

Query: 1251 TENSYRNIPSQYIP-KYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKDDFGKLSAE 1075
            TE+ Y     + IP + QT   ML+IDC  +    I +W  +  LIV TNK+D+  L  E
Sbjct: 126  TEDRYFPTQPKTIPGQKQTTMGMLNIDCQANRRTLIDDWAAEIGLIVKTNKEDY--LDPE 183

Query: 1074 EIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKEFVGQQVEN 895
             I   +  +  GIA + +          +T + R T    ++EQV   M   F+G    +
Sbjct: 184  TILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVIDAMYTMFLGLNYSD 232

Query: 894  NTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDDIFFNKLPD 730
            N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y + + +K+P 
Sbjct: 233  NKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIP- 291

Query: 729  AVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKLYCPSNNPE 550
             +       F+   N   T S LG     +K+ ++  C+  K +++ +     C S    
Sbjct: 292  IIGEKALTRFRHEANGTSTYS-LGFAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGEA 350

Query: 549  KIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK--YCPQDKK 376
             +  YGC+                                 FK   KK  K  YCP+ KK
Sbjct: 351  SV-EYGCKKTSKKKYHKRYKKKYKVYKPYKKKKKFRSGKY-FKPKEKKGSKQKYCPKGKK 408

Query: 375  DCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            DC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 409  DCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 449


>gb|AGT42167.1| coat protein [Cauliflower mosaic virus] gi|591288521|dbj|BAO53343.1|
            capsid protein [Cauliflower mosaic virus]
          Length = 489

 Score =  126 bits (317), Expect = 4e-26
 Identities = 95/341 (27%), Positives = 156/341 (45%), Gaps = 8/341 (2%)
 Frame = -1

Query: 1251 TENSYRNIPSQYIP-KYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKDDFGKLSAE 1075
            TE+ Y     + IP + QT   ML+IDC  +    I +WG +  LIV TN++D+  L  E
Sbjct: 126  TEDRYFPTQPKTIPGQKQTTMGMLNIDCQANRRTLIDDWGAEIGLIVKTNREDY--LDPE 183

Query: 1074 EIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKEFVGQQVEN 895
             I   +  +  GIA + +          +T + R T    ++EQV   M   F+G    +
Sbjct: 184  TILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVIDAMYTMFLGLNYSD 232

Query: 894  NTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDDIFFNKLPD 730
            N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y + + +K+P 
Sbjct: 233  NKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIP- 291

Query: 729  AVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKLYCPSNNPE 550
             +       F+   N G +  +LG     +K+ ++  C+  K +++ +     C S    
Sbjct: 292  IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGEA 350

Query: 549  KIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK--YCPQDKK 376
             +  YGC+                                 FK   KK  K  YCP+ KK
Sbjct: 351  SV-EYGCKKTSKKKYHKRYKKKYKVYKPYKKKKKFRSGKY-FKPKEKKGSKQKYCPKGKK 408

Query: 375  DCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            DC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 409  DCRCWICNIEGHYANECPNRQSSEKAHVLQQAEKLGLQPIE 449


>dbj|BAO53546.1| capsid protein [Cauliflower mosaic virus]
          Length = 491

 Score =  125 bits (315), Expect = 7e-26
 Identities = 93/349 (26%), Positives = 155/349 (44%), Gaps = 7/349 (2%)
 Frame = -1

Query: 1278 YPYSQGKIPTENSYRNIPSQYIPKYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKD 1099
            Y   + K P +  +   P     + QT   ML+IDC  +    I +W  +  LIV TN++
Sbjct: 120  YNERKRKTPEDRYFPTQPKTIPGQKQTTIGMLNIDCQANRRTLIDDWAAEIGLIVKTNRE 179

Query: 1098 DFGKLSAEEIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKE 919
            D+  L  E I   +  +  GIA + +          +T + R T    ++EQV   M   
Sbjct: 180  DY--LDPETILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVINAMYTM 226

Query: 918  FVGQQVENNTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDD 754
            F+G    +N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y +
Sbjct: 227  FLGLNYSDNKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYIN 286

Query: 753  IFFNKLPDAVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKL 574
             + +K+P  +       F+   N G +  +LG     +K+ ++  C+  K +++ +    
Sbjct: 287  QYLSKIP-IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNK 344

Query: 573  YCPSNNPEKIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK- 397
             C S     +  YGC+                                 FK   KK  K 
Sbjct: 345  KCCSIGEASV-EYGCKKTSKKKYHKRYKKKYKAYKPYKKKKKFRSGKY-FKPKEKKGSKQ 402

Query: 396  -YCPQDKKDCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
             YCP+ KKDC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 403  KYCPKGKKDCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 451


>emb|CCK73154.1| coat protein, partial [Cauliflower mosaic virus]
            gi|449713924|emb|CCK73155.1| coat protein, partial
            [Cauliflower mosaic virus]
          Length = 464

 Score =  125 bits (315), Expect = 7e-26
 Identities = 95/341 (27%), Positives = 154/341 (45%), Gaps = 8/341 (2%)
 Frame = -1

Query: 1251 TENSYRNIPSQYIP-KYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKDDFGKLSAE 1075
            TE+ Y     + IP + QT   ML+IDC  +    I +W  +  LIV TN++D+  L  E
Sbjct: 120  TEDRYFPTQPKTIPGQKQTTMGMLNIDCQANRRTLIDDWAAEIGLIVKTNREDY--LDPE 177

Query: 1074 EIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKEFVGQQVEN 895
             I   +  +  GIA + +          +T + R T    ++EQV   M   F+G    +
Sbjct: 178  TILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVIDAMYTMFLGLNYSD 226

Query: 894  NTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDDIFFNKLPD 730
            N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y + + +K+P 
Sbjct: 227  NKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIP- 285

Query: 729  AVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKLYCPSNNPE 550
             +       F+   N   T S LG     +K+ ++  C+  K +++ +     C S    
Sbjct: 286  IIGEKALTRFRHEANGTSTYS-LGFAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGEA 344

Query: 549  KIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK--YCPQDKK 376
             +  YGC+                                 FK   KK  K  YCP+ KK
Sbjct: 345  SV-EYGCKKTSKKKYHKRYKKKYKAYKPYKKKKKFRSGKY-FKPKEKKGSKQKYCPKGKK 402

Query: 375  DCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            DC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 403  DCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 443


>dbj|BAO53588.1| capsid protein [Cauliflower mosaic virus]
          Length = 491

 Score =  125 bits (314), Expect = 1e-25
 Identities = 93/349 (26%), Positives = 155/349 (44%), Gaps = 7/349 (2%)
 Frame = -1

Query: 1278 YPYSQGKIPTENSYRNIPSQYIPKYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKD 1099
            Y   + K P +  +   P     + QT   ML+IDC  +    I +W  +  LIV TN++
Sbjct: 120  YNERKRKTPEDRYFPTQPKTIPGQKQTTIGMLNIDCQANRRTLIDDWAAEIGLIVKTNRE 179

Query: 1098 DFGKLSAEEIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKE 919
            D+  L  E I   +  +  GIA + +          +T + R T    ++EQV   M   
Sbjct: 180  DY--LDPETILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVIDAMYTM 226

Query: 918  FVGQQVENNTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDD 754
            F+G    +N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y +
Sbjct: 227  FLGLNYSDNKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYIN 286

Query: 753  IFFNKLPDAVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKL 574
             + +K+P  +       F+   N G +  +LG     +K+ ++  C+  K +++ +    
Sbjct: 287  QYLSKIP-IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNK 344

Query: 573  YCPSNNPEKIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK- 397
             C S     +  YGC+                                 FK   KK  K 
Sbjct: 345  KCCSIGEASV-EYGCKKTSKKKYHKRYKKKYKAYKPYKKKKKFRSGKY-FKPKEKKGSKQ 402

Query: 396  -YCPQDKKDCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
             YCP+ KKDC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 403  KYCPKGKKDCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 451


>dbj|BAO53567.1| capsid protein [Cauliflower mosaic virus]
          Length = 489

 Score =  125 bits (314), Expect = 1e-25
 Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 8/341 (2%)
 Frame = -1

Query: 1251 TENSYRNIPSQYIP-KYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKDDFGKLSAE 1075
            TE+ Y     + IP + QT   ML+IDC  +    I +W  +  LIV TN++D+  L  E
Sbjct: 126  TEDRYFPTQPKTIPGQKQTTMGMLNIDCQANRRTLIDDWAAEIGLIVKTNREDY--LDPE 183

Query: 1074 EIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKEFVGQQVEN 895
             I   +  +  GIA + +          +T + R T    ++EQV   M   F+G    +
Sbjct: 184  TILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVIDAMYTMFLGLNYSD 232

Query: 894  NTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDDIFFNKLPD 730
            N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y + + +K+P 
Sbjct: 233  NKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIP- 291

Query: 729  AVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKLYCPSNNPE 550
             +       F+   N G +  +LG     +K+ ++  C+  K +++ +     C S    
Sbjct: 292  IIGEKALTRFRHEAN-GSSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGEA 350

Query: 549  KIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK--YCPQDKK 376
             +  YGC+                                 FK   KK  K  YCP+ KK
Sbjct: 351  SV-EYGCKKTSKKKYHKRYKKKYKAYKPYKKKKKFRSGKY-FKPKEKKGSKQKYCPKGKK 408

Query: 375  DCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            DC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 409  DCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 449


>dbj|BAO53560.1| capsid protein [Cauliflower mosaic virus]
          Length = 491

 Score =  125 bits (314), Expect = 1e-25
 Identities = 93/349 (26%), Positives = 155/349 (44%), Gaps = 7/349 (2%)
 Frame = -1

Query: 1278 YPYSQGKIPTENSYRNIPSQYIPKYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKD 1099
            Y   + K P +  +   P     + QT   ML+IDC  +    I +W  +  LIV TN++
Sbjct: 120  YNERKRKTPEDRYFPTQPKTIPGQKQTTIGMLNIDCQANRRTLIDDWAAEIGLIVKTNRE 179

Query: 1098 DFGKLSAEEIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKE 919
            D+  L  E I   +  +  GIA + +          +T + R T    ++EQV   M   
Sbjct: 180  DY--LDPETILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVIDAMYTM 226

Query: 918  FVGQQVENNTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDD 754
            F+G    +N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y +
Sbjct: 227  FLGLNYSDNKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYIN 286

Query: 753  IFFNKLPDAVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKL 574
             + +K+P  +       F+   N G +  +LG     +K+ ++  C+  K +++ +    
Sbjct: 287  QYLSKIP-IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNK 344

Query: 573  YCPSNNPEKIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK- 397
             C S     +  YGC+                                 FK   KK  K 
Sbjct: 345  KCCSIGEASV-EYGCKKTSKKKYHKRYKKKYKAYKPYKKKKKFRSGKY-FKPKEKKGSKQ 402

Query: 396  -YCPQDKKDCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
             YCP+ KKDC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 403  KYCPKGKKDCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 451


>dbj|BAO53364.1| capsid protein [Cauliflower mosaic virus]
          Length = 485

 Score =  125 bits (314), Expect = 1e-25
 Identities = 90/347 (25%), Positives = 154/347 (44%), Gaps = 5/347 (1%)
 Frame = -1

Query: 1278 YPYSQGKIPTENSYRNIPSQYIPKYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKD 1099
            Y   + K P +  +   P     + QT+  ML+IDC  +    I +W  +  LIV TN++
Sbjct: 117  YNERKRKTPEDRYFPTQPKTIPGQKQTSMGMLNIDCQTNRRTLIDDWAAEIGLIVKTNRE 176

Query: 1098 DFGKLSAEEIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKE 919
            D+  L  E I   +  +  GIA + +          +T + R T    ++EQV   M   
Sbjct: 177  DY--LDPETILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVINAMYTM 223

Query: 918  FVGQQVENNTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDD 754
            F+G    +N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y +
Sbjct: 224  FLGLNYSDNKVAEKIDEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYIN 283

Query: 753  IFFNKLPDAVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKL 574
             + +K+P  +       F+   N G +  +LG     +K+ ++  C+  K +++ +    
Sbjct: 284  QYLSKIP-IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNK 341

Query: 573  YCPSNNPEKIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDKY 394
             C S     +  YGC+                                 FK+      KY
Sbjct: 342  KCCSIGEASV-EYGCKKTSKKKYHKRYKKKYKVYKPYKKKKKFRSGKY-FKEKKGSKQKY 399

Query: 393  CPQDKKDCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            CP+ KKDC+CW+C   GHYAN+CPN++ ++K   L  A   GL+PIE
Sbjct: 400  CPKGKKDCRCWICNIEGHYANECPNRQSSEKAHILQQAKNLGLQPIE 446


>dbj|BAO53665.1| capsid protein [Cauliflower mosaic virus]
          Length = 492

 Score =  125 bits (313), Expect = 1e-25
 Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 8/341 (2%)
 Frame = -1

Query: 1251 TENSYRNIPSQYIP-KYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKDDFGKLSAE 1075
            TE+ Y     + IP + QT   ML+IDC  +    I +W  +  LIV TN++D+  L  E
Sbjct: 129  TEDRYFPTQPKTIPGQKQTTMGMLNIDCQANRRTLIDDWAAEIGLIVKTNREDY--LDPE 186

Query: 1074 EIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKEFVGQQVEN 895
             I   +  +  GIA + +          +T + R T    ++EQV   M   F+G    +
Sbjct: 187  TILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVINAMYTMFLGLNYSD 235

Query: 894  NTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDDIFFNKLPD 730
            N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y + + +K+P 
Sbjct: 236  NKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIP- 294

Query: 729  AVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKLYCPSNNPE 550
             +       F+   N G +  +LG     +K+ ++  C+  K +++ +     C S    
Sbjct: 295  IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGEA 353

Query: 549  KIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK--YCPQDKK 376
             +  YGC+                                 FK   KK  K  YCP+ KK
Sbjct: 354  SV-EYGCKKTSKKKYHKRYKKKYKAYKPYKKKKKFRSGKY-FKPKEKKGSKQKYCPKGKK 411

Query: 375  DCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            DC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 412  DCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 452


>dbj|BAO53658.1| capsid protein [Cauliflower mosaic virus]
          Length = 492

 Score =  125 bits (313), Expect = 1e-25
 Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 8/341 (2%)
 Frame = -1

Query: 1251 TENSYRNIPSQYIP-KYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKDDFGKLSAE 1075
            TE+ Y     + IP + QT   ML+IDC  +    I +W  +  LIV TN++D+  L  E
Sbjct: 129  TEDRYFPTQPKTIPGQKQTTMGMLNIDCQANRRTLIDDWAAEIGLIVKTNREDY--LDPE 186

Query: 1074 EIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKEFVGQQVEN 895
             I   +  +  GIA + +          +T + R T    ++EQV   M   F+G    +
Sbjct: 187  TILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVINAMYTMFLGLNYSD 235

Query: 894  NTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDDIFFNKLPD 730
            N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y + + +K+P 
Sbjct: 236  NKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIP- 294

Query: 729  AVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKLYCPSNNPE 550
             +       F+   N G +  +LG     +K+ ++  C+  K +++ +     C S    
Sbjct: 295  IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGEA 353

Query: 549  KIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK--YCPQDKK 376
             +  YGC+                                 FK   KK  K  YCP+ KK
Sbjct: 354  SV-EYGCKKTSKKKYHKRYKKKYKAYKPYKKKKKFRSGKY-FKPKEKKGSKQKYCPKGKK 411

Query: 375  DCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            DC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 412  DCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 452


>dbj|BAO53644.1| capsid protein [Cauliflower mosaic virus]
          Length = 492

 Score =  125 bits (313), Expect = 1e-25
 Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 8/341 (2%)
 Frame = -1

Query: 1251 TENSYRNIPSQYIP-KYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKDDFGKLSAE 1075
            TE+ Y     + IP + QT   ML+IDC  +    I +W  +  LIV TN++D+  L  E
Sbjct: 129  TEDRYFPTQPKTIPGQKQTTMGMLNIDCQANRRTLIDDWAAEIGLIVKTNREDY--LDPE 186

Query: 1074 EIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKEFVGQQVEN 895
             I   +  +  GIA + +          +T + R T    ++EQV   M   F+G    +
Sbjct: 187  TILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVINAMYTMFLGLNYSD 235

Query: 894  NTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDDIFFNKLPD 730
            N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y + + +K+P 
Sbjct: 236  NKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIP- 294

Query: 729  AVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKLYCPSNNPE 550
             +       F+   N G +  +LG     +K+ ++  C+  K +++ +     C S    
Sbjct: 295  IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGEA 353

Query: 549  KIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK--YCPQDKK 376
             +  YGC+                                 FK   KK  K  YCP+ KK
Sbjct: 354  SV-EYGCKKTSKKKYHKRYKKKYKAYKPYKKKKKFRSGKY-FKPKEKKGSKQKYCPKGKK 411

Query: 375  DCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            DC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 412  DCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 452


>dbj|BAO53637.1| capsid protein [Cauliflower mosaic virus]
          Length = 492

 Score =  125 bits (313), Expect = 1e-25
 Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 8/341 (2%)
 Frame = -1

Query: 1251 TENSYRNIPSQYIP-KYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKDDFGKLSAE 1075
            TE+ Y     + IP + QT   ML+IDC  +    I +W  +  LIV TN++D+  L  E
Sbjct: 129  TEDRYFPTQPKTIPGQKQTTMGMLNIDCQANRRTLIDDWAAEIGLIVKTNREDY--LDPE 186

Query: 1074 EIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKEFVGQQVEN 895
             I   +  +  GIA + +          +T + R T    ++EQV   M   F+G    +
Sbjct: 187  TILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVINAMYTMFLGLNYSD 235

Query: 894  NTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDDIFFNKLPD 730
            N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y + + +K+P 
Sbjct: 236  NKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIP- 294

Query: 729  AVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKLYCPSNNPE 550
             +       F+   N G +  +LG     +K+ ++  C+  K +++ +     C S    
Sbjct: 295  IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGEA 353

Query: 549  KIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK--YCPQDKK 376
             +  YGC+                                 FK   KK  K  YCP+ KK
Sbjct: 354  SV-EYGCKKTSKKKYHKRYKKKYKAYKPYKKKKKFRSGKY-FKPKEKKGSKQKYCPKGKK 411

Query: 375  DCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            DC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 412  DCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 452


>dbj|BAO53553.1| capsid protein [Cauliflower mosaic virus]
          Length = 489

 Score =  125 bits (313), Expect = 1e-25
 Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 8/341 (2%)
 Frame = -1

Query: 1251 TENSYRNIPSQYIP-KYQTNTDMLDIDCNEDTLKNILEWGNKTALIVATNKDDFGKLSAE 1075
            TE+ Y     + IP + QT   ML+IDC  +    I +W  +  LIV TN++D+  L  E
Sbjct: 126  TEDRYFPTQPKTIPGQKQTTMGMLNIDCQANRRTLIDDWAAEIGLIVKTNREDY--LDPE 183

Query: 1074 EIFNFITFRAKGIAFQFLVGLDKKADPLSTIFLRETDPFKVVEQVEKLMIKEFVGQQVEN 895
             I   +  +  GIA + +          +T + R T    ++EQV   M   F+G    +
Sbjct: 184  TILLLMEHKTSGIAKELI---------RNTRWNRTTGD--IIEQVINAMYTMFLGLNYSD 232

Query: 894  NTELER-----NAIYHLTNLRICNMCYYPQYICEFQKYYYQISHDNRHLYDDIFFNKLPD 730
            N   E+      A   +T L++C++CY  ++ C+++K  Y+    +   Y + + +K+P 
Sbjct: 233  NKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIP- 291

Query: 729  AVSNTVKDYFQTLVNEGGTQSTLGGRIYALKQWMTNQCNKEKIRQQTQVAKLYCPSNNPE 550
             +       F+   N G +  +LG     +K+ ++  C+  K +++ +     C S    
Sbjct: 292  IIGEKALTRFRHEAN-GTSIYSLGFAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGEA 350

Query: 549  KIGNYGCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQFKKYTKKNDK--YCPQDKK 376
             +  YGC+                                 FK   KK  K  YCP+ KK
Sbjct: 351  SV-EYGCKKTSKKKYHKRYKKKYKAYKPYKKKKKFRSGKY-FKPKEKKGSKQKYCPKGKK 408

Query: 375  DCKCWLCEEIGHYANKCPNKKGNKKTEFLNIAYKTGLEPIE 253
            DC+CW+C   GHYAN+CPN++ ++K   L  A K GL+PIE
Sbjct: 409  DCRCWICNIEGHYANECPNRQSSEKAHILQQAEKLGLQPIE 449