BLASTX nr result

ID: Mentha24_contig00012023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00012023
         (541 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004236463.1| PREDICTED: pentatricopeptide repeat-containi...    62   7e-08
ref|XP_006364204.1| PREDICTED: pentatricopeptide repeat-containi...    59   8e-07
ref|XP_007216422.1| hypothetical protein PRUPE_ppa023053mg [Prun...    57   3e-06
ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06

>ref|XP_004236463.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Solanum lycopersicum]
          Length = 828

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 30/55 (54%), Positives = 38/55 (69%)
 Frame = +3

Query: 6   DSVSLAALLHGVCLVGKSKEWKSVIASKSIDAKLDVALKYLNIFEHYSTQELTNE 170
           DSV+ AALLHG+CL GKSKEWKS+I+      +L VALKY  IF+ Y +    +E
Sbjct: 746 DSVTFAALLHGICLNGKSKEWKSIISCSLSATELSVALKYSLIFDQYLSHGFNSE 800


>ref|XP_006364204.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like isoform X1 [Solanum tuberosum]
           gi|565397234|ref|XP_006364205.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g52620-like isoform X2 [Solanum tuberosum]
          Length = 816

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 28/55 (50%), Positives = 37/55 (67%)
 Frame = +3

Query: 6   DSVSLAALLHGVCLVGKSKEWKSVIASKSIDAKLDVALKYLNIFEHYSTQELTNE 170
           DSV+ AALLHG+CL GK+KEWKS+I+      +L  ALKY  IF+ Y +    +E
Sbjct: 748 DSVTFAALLHGICLDGKAKEWKSIISCSLSATELSFALKYSLIFDQYLSHGFDSE 802


>ref|XP_007216422.1| hypothetical protein PRUPE_ppa023053mg [Prunus persica]
           gi|462412572|gb|EMJ17621.1| hypothetical protein
           PRUPE_ppa023053mg [Prunus persica]
          Length = 803

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/56 (48%), Positives = 38/56 (67%)
 Frame = +3

Query: 3   LDSVSLAALLHGVCLVGKSKEWKSVIASKSIDAKLDVALKYLNIFEHYSTQELTNE 170
           LDSVS A LL+G+CL G+SKEWK++I+    D +L  +LKYL + + Y  Q   +E
Sbjct: 724 LDSVSFAGLLYGICLEGRSKEWKNIISFDLKDQELQTSLKYLLVLDDYLHQGRPSE 779


>ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/50 (48%), Positives = 35/50 (70%)
 Frame = +3

Query: 6   DSVSLAALLHGVCLVGKSKEWKSVIASKSIDAKLDVALKYLNIFEHYSTQ 155
           DSVS  ALLHGVCL G+SKEWK++++    + +L +A+ Y +I + Y  Q
Sbjct: 742 DSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQ 791


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