BLASTX nr result
ID: Mentha24_contig00011487
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00011487
(576 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006361948.1| PREDICTED: uncharacterized HTH La-type RNA-b... 60 3e-14
ref|XP_006361949.1| PREDICTED: uncharacterized HTH La-type RNA-b... 60 3e-14
ref|XP_004233568.1| PREDICTED: uncharacterized protein LOC101255... 58 6e-14
ref|XP_004233569.1| PREDICTED: uncharacterized protein LOC101255... 58 6e-14
ref|XP_006361945.1| PREDICTED: la-related protein-like [Solanum ... 62 5e-13
ref|XP_006361946.1| PREDICTED: la-related protein-like [Solanum ... 52 6e-09
gb|EYU18067.1| hypothetical protein MIMGU_mgv1a005127mg [Mimulus... 61 2e-07
ref|XP_007046622.1| Winged-helix DNA-binding transcription facto... 58 2e-06
ref|XP_003519856.1| PREDICTED: la-related protein 1-like [Glycin... 58 2e-06
ref|XP_004287781.1| PREDICTED: uncharacterized protein LOC101290... 57 3e-06
ref|XP_004509397.1| PREDICTED: uncharacterized protein LOC101504... 57 5e-06
ref|XP_002279250.2| PREDICTED: uncharacterized protein LOC100243... 57 5e-06
emb|CBI19921.3| unnamed protein product [Vitis vinifera] 57 5e-06
ref|XP_003629259.1| La-related protein 1B [Medicago truncatula] ... 57 5e-06
ref|XP_007156194.1| hypothetical protein PHAVU_003G266200g [Phas... 56 6e-06
>ref|XP_006361948.1| PREDICTED: uncharacterized HTH La-type RNA-binding protein
C1527.03-like isoform X1 [Solanum tuberosum]
Length = 570
Score = 60.5 bits (145), Expect(2) = 3e-14
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
Frame = -3
Query: 193 RNNSGPLTRGDGSYHSNHGGRRDQERGKQDW-GHRSFGSR----ENQRSGSRPFLRG 38
R N GP RGDG+Y++ +GGRRDQER DW HRS+G+R + QR +RPF+ G
Sbjct: 288 RGNVGPHPRGDGTYYNGYGGRRDQERRNPDWKPHRSWGNRDAHMQPQRGPARPFMGG 344
Score = 43.9 bits (102), Expect(2) = 3e-14
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Frame = -1
Query: 576 RASPKSP----LKAISHGSVNVSQDMSGGDSLSSPKEXXXXXXXXXXXXXXVGPSRQKRE 409
+ASPK P LK++S GSV+V++ G + +S ++ V PSRQ+
Sbjct: 151 KASPKLPSSDSLKSLSDGSVSVTEGT--GMASASHRQANTNNVNPNTMLNHVVPSRQR-- 206
Query: 408 SIKRSSGNSSQHLPPSDDISP--ASPLAQHVVLDSPSGKFVGSAGEPSKDNKTVKDGGHR 235
+KR GNS+ + + S A V ++ + A S+DN ++GG
Sbjct: 207 FMKRGGGNSNHNASANGGFSQQQAQGFEVETVFNNSAKSGNSGAESSSRDNNNYRNGGQW 266
Query: 234 G-----SYGGNESQPQR 199
G S+GGN+ Q QR
Sbjct: 267 GGFGSQSHGGNDYQHQR 283
>ref|XP_006361949.1| PREDICTED: uncharacterized HTH La-type RNA-binding protein
C1527.03-like isoform X2 [Solanum tuberosum]
Length = 561
Score = 60.5 bits (145), Expect(2) = 3e-14
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
Frame = -3
Query: 193 RNNSGPLTRGDGSYHSNHGGRRDQERGKQDW-GHRSFGSR----ENQRSGSRPFLRG 38
R N GP RGDG+Y++ +GGRRDQER DW HRS+G+R + QR +RPF+ G
Sbjct: 288 RGNVGPHPRGDGTYYNGYGGRRDQERRNPDWKPHRSWGNRDAHMQPQRGPARPFMGG 344
Score = 43.9 bits (102), Expect(2) = 3e-14
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Frame = -1
Query: 576 RASPKSP----LKAISHGSVNVSQDMSGGDSLSSPKEXXXXXXXXXXXXXXVGPSRQKRE 409
+ASPK P LK++S GSV+V++ G + +S ++ V PSRQ+
Sbjct: 151 KASPKLPSSDSLKSLSDGSVSVTEGT--GMASASHRQANTNNVNPNTMLNHVVPSRQR-- 206
Query: 408 SIKRSSGNSSQHLPPSDDISP--ASPLAQHVVLDSPSGKFVGSAGEPSKDNKTVKDGGHR 235
+KR GNS+ + + S A V ++ + A S+DN ++GG
Sbjct: 207 FMKRGGGNSNHNASANGGFSQQQAQGFEVETVFNNSAKSGNSGAESSSRDNNNYRNGGQW 266
Query: 234 G-----SYGGNESQPQR 199
G S+GGN+ Q QR
Sbjct: 267 GGFGSQSHGGNDYQHQR 283
>ref|XP_004233568.1| PREDICTED: uncharacterized protein LOC101255266 isoform 1 [Solanum
lycopersicum]
Length = 570
Score = 58.2 bits (139), Expect(2) = 6e-14
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 5/57 (8%)
Frame = -3
Query: 193 RNNSGPLTRGDGSYHSNHGGRRDQERGKQDW-GHRSFGSR----ENQRSGSRPFLRG 38
R + GP RGDG YH+ +GGRRDQ+R QDW RS+G+R + QR +RPF+ G
Sbjct: 288 RGSVGPHPRGDGMYHNGYGGRRDQDRRNQDWKPQRSWGNRDARMQPQRGPARPFMGG 344
Score = 45.1 bits (105), Expect(2) = 6e-14
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Frame = -1
Query: 576 RASPKSP----LKAISHGSVNVSQDMSGGDSLSSPKEXXXXXXXXXXXXXXVGPSRQKRE 409
+ASPK P LK++S GSV+V+Q G + +S ++ V PSRQ+
Sbjct: 151 KASPKLPSSDSLKSLSDGSVSVTQ--GSGMASASHRQANTNNVNPNTMPNHVVPSRQR-- 206
Query: 408 SIKRSSGNSSQHLPPSDDISPASPLAQHVVLDSPSGKFVGSAG--EPSKDNKTVKDGGHR 235
S+KR GNS+ + + S V + G++G S+DN ++GG
Sbjct: 207 SMKRGGGNSNHNASANGGFSQQQTQGFEVETVHNNSVKSGNSGAESSSRDNNNYRNGGQW 266
Query: 234 G-----SYGGNESQPQ 202
G S+GGN+ Q Q
Sbjct: 267 GGFGSQSHGGNDYQHQ 282
>ref|XP_004233569.1| PREDICTED: uncharacterized protein LOC101255266 isoform 2 [Solanum
lycopersicum]
Length = 563
Score = 58.2 bits (139), Expect(2) = 6e-14
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 5/57 (8%)
Frame = -3
Query: 193 RNNSGPLTRGDGSYHSNHGGRRDQERGKQDW-GHRSFGSR----ENQRSGSRPFLRG 38
R + GP RGDG YH+ +GGRRDQ+R QDW RS+G+R + QR +RPF+ G
Sbjct: 288 RGSVGPHPRGDGMYHNGYGGRRDQDRRNQDWKPQRSWGNRDARMQPQRGPARPFMGG 344
Score = 45.1 bits (105), Expect(2) = 6e-14
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Frame = -1
Query: 576 RASPKSP----LKAISHGSVNVSQDMSGGDSLSSPKEXXXXXXXXXXXXXXVGPSRQKRE 409
+ASPK P LK++S GSV+V+Q G + +S ++ V PSRQ+
Sbjct: 151 KASPKLPSSDSLKSLSDGSVSVTQ--GSGMASASHRQANTNNVNPNTMPNHVVPSRQR-- 206
Query: 408 SIKRSSGNSSQHLPPSDDISPASPLAQHVVLDSPSGKFVGSAG--EPSKDNKTVKDGGHR 235
S+KR GNS+ + + S V + G++G S+DN ++GG
Sbjct: 207 SMKRGGGNSNHNASANGGFSQQQTQGFEVETVHNNSVKSGNSGAESSSRDNNNYRNGGQW 266
Query: 234 G-----SYGGNESQPQ 202
G S+GGN+ Q Q
Sbjct: 267 GGFGSQSHGGNDYQHQ 282
>ref|XP_006361945.1| PREDICTED: la-related protein-like [Solanum tuberosum]
Length = 501
Score = 62.0 bits (149), Expect(2) = 5e-13
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Frame = -3
Query: 193 RNNSGPLTRGDGSYHSNHGGRRDQERGKQDW-GHRSFGSR----ENQRSGSRPFL 44
R N GP RGDG+YH+ +GGRRDQER QDW HR +G+R + QR +RPF+
Sbjct: 243 RGNVGPHPRGDGTYHNGYGGRRDQERQNQDWKPHRGWGNRDAHMQPQRGPARPFM 297
Score = 38.1 bits (87), Expect(2) = 5e-13
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Frame = -1
Query: 573 ASPKSPLKAISHGSVNVSQDMSGGDSLSSPKEXXXXXXXXXXXXXXVGPSRQKRESIKRS 394
+S L+ + +GSV+ +Q G + +S ++ V PSRQ+ S+KR
Sbjct: 113 SSSSDSLRTLPNGSVSETQVT--GMASASHRQANTNNANPNTMLNHVVPSRQR--SMKRG 168
Query: 393 SGNSSQHLPPSDDISPASPLAQHVVLDSPSGKFVGSAGEPSKDNKTVKDGGHRG-----S 229
GNS+ + + S V + SGK E S + +DGG G S
Sbjct: 169 GGNSNHNASANGVFSQQQAHGFEVETVNNSGKSGNYGAEFSSRDNNRRDGGQWGGFGAQS 228
Query: 228 YGGNESQPQR 199
+GGN+ Q QR
Sbjct: 229 HGGNDHQHQR 238
>ref|XP_006361946.1| PREDICTED: la-related protein-like [Solanum tuberosum]
Length = 567
Score = 52.4 bits (124), Expect(2) = 6e-09
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Frame = -3
Query: 193 RNNSGPLTRGDGSYHSNHGGRRDQERGKQDW-GHRSFGSR----ENQRSGSRPFL 44
R N GP RGDG+Y + +GGRRDQER QDW HR + +R + R +RP++
Sbjct: 287 RGNVGPHPRGDGTYQNGYGGRRDQERRNQDWKPHRGWVNRDAHMQPHRGPARPYM 341
Score = 33.9 bits (76), Expect(2) = 6e-09
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Frame = -1
Query: 576 RASPK---SPLKAISHGSVNVSQDMSGGDSLSSPKEXXXXXXXXXXXXXXVGPSRQKRES 406
+ASPK S + S +VS G + +S ++ V PSRQ+ S
Sbjct: 150 KASPKLSSSSSDLLKTPSRSVSLSQGPGMASASHRQSNTNNVNPDTMLNHVVPSRQR--S 207
Query: 405 IKRSSGNSSQHLPPSDDISP--ASPLAQHVVLDSPSGKFVGSAGEPSKDNKTVKDGGHRG 232
+KR GNS+ + + S A VL++ SGK S E S + + +DGG G
Sbjct: 208 MKRGGGNSNHNASANGVFSSQQAQGFEVETVLNN-SGKTGNSGVESSSRDYSHRDGGQWG 266
Query: 231 -----SYGGNESQPQR 199
S+GG + Q QR
Sbjct: 267 GFGAQSHGGIDHQHQR 282
>gb|EYU18067.1| hypothetical protein MIMGU_mgv1a005127mg [Mimulus guttatus]
Length = 496
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Frame = -3
Query: 193 RNNSGPLTRGDGSYHSNHGGRRDQERGKQDWGHRSFGSREN----QRSGSRPFLRG 38
RNN+GP RGDGSYH +HGGRRD +RSFG+RE+ QR SRPF RG
Sbjct: 255 RNNNGPQPRGDGSYHHSHGGRRDNP-------NRSFGNRESHAPQQRVASRPFTRG 303
Score = 56.6 bits (135), Expect = 5e-06
Identities = 56/154 (36%), Positives = 74/154 (48%), Gaps = 25/154 (16%)
Frame = -1
Query: 576 RASPKSP----LKAISHGSVNVSQDMSGGDSLSSPKEXXXXXXXXXXXXXXVGPSRQKRE 409
RASPKS LKA+S GS+ +SQ++ G S SSPKE V P+RQK
Sbjct: 137 RASPKSSSAHSLKALSVGSIPLSQELGVGSS-SSPKEVNTSLSSPNLTSTHVVPARQK-- 193
Query: 408 SIKRSSGNSSQH--LPPSDDISPASPLAQHVVLDSP---SGKFVGSAGEPSKDNKTVK-- 250
S+KR G+SSQ L +D S SP+ Q ++++P SGK S GE S+D +
Sbjct: 194 SMKRGGGSSSQGSILAANDTSSQVSPM-QVAMVEAPSPNSGK--SSVGEFSRDRDVGQRS 250
Query: 249 --------------DGGHRGSYGGNESQPQRXEG 190
DG + S+GG P R G
Sbjct: 251 YPFRRNNNGPQPRGDGSYHHSHGGRRDNPNRSFG 284
>ref|XP_007046622.1| Winged-helix DNA-binding transcription factor family protein,
putative [Theobroma cacao] gi|508698883|gb|EOX90779.1|
Winged-helix DNA-binding transcription factor family
protein, putative [Theobroma cacao]
Length = 533
Score = 58.2 bits (139), Expect = 2e-06
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = -3
Query: 187 NSGPLTRGDGSYHSNHGGRRDQERGKQDWGHRSFGSRE 74
N GP RGDGS+H N+GGRR+Q+ G QDW R+F SR+
Sbjct: 255 NGGPHPRGDGSHHQNYGGRRNQDHGNQDWNGRNFNSRD 292
>ref|XP_003519856.1| PREDICTED: la-related protein 1-like [Glycine max]
Length = 497
Score = 58.2 bits (139), Expect = 2e-06
Identities = 27/43 (62%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Frame = -3
Query: 193 RNNSGPLTRGDGSYHSNHGGRRDQE-RGKQDW-GHRSFGSREN 71
RN GP RGDG +H N+GGRRDQ+ RG QDW HRSF R+N
Sbjct: 218 RNGGGPHQRGDGHHHHNYGGRRDQDHRGNQDWNNHRSFNGRDN 260
>ref|XP_004287781.1| PREDICTED: uncharacterized protein LOC101290802 [Fragaria vesca
subsp. vesca]
Length = 337
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = -3
Query: 205 TTVXRNNSGPLTRGDGSYHSNHGGRRDQERGKQDW-GHRSFGSRENQRSGSRPFLRG 38
+++ N GP RGDGS+H N+GGR Q+RG QDW HR+F SR+N R RG
Sbjct: 59 SSLRNRNGGPHPRGDGSHHHNYGGRH-QDRGSQDWNNHRNFNSRDNHMHPQRVSPRG 114
>ref|XP_004509397.1| PREDICTED: uncharacterized protein LOC101504108 [Cicer arietinum]
Length = 481
Score = 56.6 bits (135), Expect = 5e-06
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = -3
Query: 187 NSGPLTRGDGSYHSNHGGRRDQERGKQDWG--HRSFGSRENQRS 62
N GP RGDGS+H N+GGRRDQ+R QDW R+F R+N S
Sbjct: 210 NGGPHQRGDGSHHHNYGGRRDQDRANQDWNTHRRNFNGRDNYMS 253
>ref|XP_002279250.2| PREDICTED: uncharacterized protein LOC100243746 [Vitis vinifera]
Length = 565
Score = 56.6 bits (135), Expect = 5e-06
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = -3
Query: 193 RNNSGPLTRGDGSYHSNHGGRRDQERGKQDWGHRSFGSR----ENQRSGSRPFLR 41
R N GP RGDG +H+N+GGRRDQ+RG +W RS R + QR+ R F+R
Sbjct: 277 RGNFGPHPRGDGPHHNNYGGRRDQDRGNYEWNSRSSNVRDIHMQPQRAPPRGFIR 331
>emb|CBI19921.3| unnamed protein product [Vitis vinifera]
Length = 559
Score = 56.6 bits (135), Expect = 5e-06
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = -3
Query: 193 RNNSGPLTRGDGSYHSNHGGRRDQERGKQDWGHRSFGSR----ENQRSGSRPFLR 41
R N GP RGDG +H+N+GGRRDQ+RG +W RS R + QR+ R F+R
Sbjct: 271 RGNFGPHPRGDGPHHNNYGGRRDQDRGNYEWNSRSSNVRDIHMQPQRAPPRGFIR 325
>ref|XP_003629259.1| La-related protein 1B [Medicago truncatula]
gi|355523281|gb|AET03735.1| La-related protein 1B
[Medicago truncatula]
Length = 455
Score = 56.6 bits (135), Expect = 5e-06
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = -3
Query: 193 RNNSGPLTRGDGSYHSNHGGRRDQERGKQDWG--HRSFGSRENQRS 62
RN G RGDGS+H N G RRDQ+RG QDW +R+F +R+N RS
Sbjct: 214 RNGGGLQPRGDGSHHFNSGSRRDQDRGNQDWNAHNRNFNNRDNYRS 259
>ref|XP_007156194.1| hypothetical protein PHAVU_003G266200g [Phaseolus vulgaris]
gi|561029548|gb|ESW28188.1| hypothetical protein
PHAVU_003G266200g [Phaseolus vulgaris]
Length = 487
Score = 56.2 bits (134), Expect = 6e-06
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = -3
Query: 193 RNNSGPLTRGDGSYHSNHGGRRDQERGKQDW-GHRSFGSRENQRS 62
RN GP RGDG +H N+GGRRD +RG QDW HR+F R+N S
Sbjct: 209 RNGGGPHQRGDGHHH-NYGGRRDHDRGNQDWSNHRNFNGRDNYMS 252