BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00010426
         (758 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus...   108   2e-21
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...    91   3e-16
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]    91   3e-16
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-...    79   2e-12
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...    78   4e-12
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-...    73   9e-11
ref|XP_003588449.1| RNA polymerase sigma-B factor [Medicago trun...    72   3e-10
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr...    69   1e-09
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr...    69   1e-09
ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citr...    69   1e-09
ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citr...    69   1e-09
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun...    69   1e-09
emb|CAD20832.1| sigma factor [Spinacia oleracea]                       69   1e-09
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-...    69   2e-09
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-...    69   2e-09
ref|XP_006450755.1| hypothetical protein CICLE_v10007968mg [Citr...    68   4e-09
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu...    67   9e-09
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...    66   1e-08
ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC ...    64   4e-08
ref|XP_006601059.1| PREDICTED: RNA polymerase sigma factor sigC ...    64   4e-08

>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus guttatus]
          Length = 478

 Score =  108 bits (270), Expect = 2e-21
 Identities = 74/195 (37%), Positives = 101/195 (51%), Gaps = 3/195 (1%)
 Frame = +3

Query: 183 KYFLETRELKVAVGKGSADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLD 362
           K+   ++ ++VA+GKGS+D LY LL +D Q   +++K   + S    QAS+ RLLMKNLD
Sbjct: 4   KHVYVSKYIQVALGKGSSDSLYSLLDSDIQIPKNEDKLENLTSVQATQASKLRLLMKNLD 63

Query: 363 MLEYMFTDSDVVRLERDILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTENVDEPR 542
           +LE MF DS+ VRLE DILE L+RLGALRLF                  + PTE V+E +
Sbjct: 64  VLEDMFADSNAVRLEGDILEQLERLGALRLF-HSCLSRTIKSYTSFDLSDGPTEIVEECK 122

Query: 543 LNENHXXXXXXXXXXXXXXXXXXXXXMEKENDTLQED---XXXXXXXXXXXXXNKKLKVA 713
           +  +                       E  + T+ +D                NK+ K A
Sbjct: 123 VFVHSGKKELRKLRRKRTSDNESPTIQESPSKTISKDLQQLKFAIAGRTPRSRNKRQKTA 182

Query: 714 RNEAEMSNGVKMVAE 758
           RNEA+MS+GVK VAE
Sbjct: 183 RNEADMSSGVKRVAE 197


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 76/250 (30%), Positives = 122/250 (48%), Gaps = 17/250 (6%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAET--QNDTSRTQVSSSSHQFFEKYFLETRELKVAVGKG 230
           +G+++S+   R S  SV   + E+  ++       SS + Q FE  +     +K+ +GK 
Sbjct: 33  QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKC 92

Query: 231 SADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLER 410
           S   L++++ N +Q+   ++ SA V      +ASQ+ LL++NLD+LE MF DS++VRLER
Sbjct: 93  SHGDLFKIV-NASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLER 151

Query: 411 DILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTENVDEPRLN---ENHXXXXXXXX 581
           DI+  L RLGAL+LF                  +APTE++ E + N   ++H        
Sbjct: 152 DIMVQLGRLGALKLFQ-ICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRS 210

Query: 582 XXXXXXXXXXXXXMEKEND---------TLQEDXXXXXXXXXXXXXN---KKLKVARNEA 725
                        +EK ++         T+++              N   K+L  A+NEA
Sbjct: 211 GKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEA 270

Query: 726 EMSNGVKMVA 755
           EMS GVK+VA
Sbjct: 271 EMSKGVKLVA 280


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 76/250 (30%), Positives = 122/250 (48%), Gaps = 17/250 (6%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAET--QNDTSRTQVSSSSHQFFEKYFLETRELKVAVGKG 230
           +G+++S+   R S  SV   + E+  ++       SS + Q FE  +     +K+ +GK 
Sbjct: 83  QGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKC 142

Query: 231 SADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLER 410
           S   L++++ N +Q+   ++ SA V      +ASQ+ LL++NLD+LE MF DS++VRLER
Sbjct: 143 SHGDLFKIV-NASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLER 201

Query: 411 DILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTENVDEPRLN---ENHXXXXXXXX 581
           DI+  L RLGAL+LF                  +APTE++ E + N   ++H        
Sbjct: 202 DIMVQLGRLGALKLFQ-ICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRS 260

Query: 582 XXXXXXXXXXXXXMEKEND---------TLQEDXXXXXXXXXXXXXN---KKLKVARNEA 725
                        +EK ++         T+++              N   K+L  A+NEA
Sbjct: 261 GKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEA 320

Query: 726 EMSNGVKMVA 755
           EMS GVK+VA
Sbjct: 321 EMSKGVKLVA 330


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
           tuberosum]
          Length = 555

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 74/250 (29%), Positives = 105/250 (42%), Gaps = 16/250 (6%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAETQNDTSRTQVSSSSHQFFEKYFLETRELKVAVGKGSA 236
           +GR++ Y  AR     +      + +D  R Q   S  Q +      T E+K   G+GS 
Sbjct: 31  KGREALYDPARSLKPFITGDCEPSHSDPFRVQTCLSDPQLWTSDTSVTTEIKTRNGRGSP 90

Query: 237 DGLYRLLGNDNQS-SNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLERD 413
             +Y  +G+     S D EK  ++ ++  +  S   LLMKNLD+LE MF DS++ RLERD
Sbjct: 91  SNVYGDIGSHKIGISPDGEKPTYLNTTKSLHFS---LLMKNLDLLENMFADSEMSRLERD 147

Query: 414 ILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTE---NVDEPRLNENHXXXXXXXXX 584
           IL  L++LGAL  F                  + P E    V++  L  N          
Sbjct: 148 ILVQLEKLGALEFF-HTCLSRTHHSSTFPKVLDVPRELIKEVEKDDLVGNAIDKVVVRSR 206

Query: 585 XXXXXXXXXXXXMEKEND---------TLQED---XXXXXXXXXXXXXNKKLKVARNEAE 728
                           ND          +QED                NK+ K+A+NEAE
Sbjct: 207 KKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRTQASRNKRQKIAKNEAE 266

Query: 729 MSNGVKMVAE 758
           MS GVK+VA+
Sbjct: 267 MSRGVKLVAQ 276


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
           gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
           C, putative [Theobroma cacao]
          Length = 848

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
 Frame = +3

Query: 135 DTSRTQVSSSSHQFFEKYFLETRELKVAVGKGSA---------DGLYRLLGNDNQSSNDK 287
           D  +   SS++ Q  EK  LE  E+KV +GKGS          D  + L+G D  SS   
Sbjct: 347 DPLKAYASSAAPQTLEKGCLEIEEMKVNIGKGSQAHSHSLTMIDKTHELIGGDKSSSRTS 406

Query: 288 EKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLERDILEHLQRLGALRLFD 458
            ++         +AS Y LLM+NLD+LE  F DSDV+ LER+IL  L R GAL+LF+
Sbjct: 407 PQAC--------KASHYSLLMENLDVLEETFADSDVLTLEREILLQLGRFGALKLFN 455


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
           lycopersicum]
          Length = 551

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 72/249 (28%), Positives = 101/249 (40%), Gaps = 15/249 (6%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAETQNDTSRTQVSSSSHQFFEKYFLETRELKVAVGKGSA 236
           +GR++ Y  AR     +      + +D  R Q   S  Q +      T E K   G+GS 
Sbjct: 31  KGRETLYDPARSLKPFINGDCEPSHSDPFRVQTCLSDPQLWTSDASVTTETKTRNGRGSP 90

Query: 237 DGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLERDI 416
             +Y   G+      D EK  ++ ++  +  S   LLMKNLD+LE MF DS++ RLERDI
Sbjct: 91  SNVY---GDIGSYKIDGEKPTYLNTTKSLHFS---LLMKNLDLLENMFADSEMSRLERDI 144

Query: 417 LEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTE---NVDEPRLNENHXXXXXXXXXX 587
           L  L++LGAL  F                  + P E    V++  L  N           
Sbjct: 145 LVQLEKLGALEFF-HTCLSRTHHSSSFPKVLDVPRELIKEVEKDDLVGNAMDKVVVRSRK 203

Query: 588 XXXXXXXXXXXMEKEND---------TLQED---XXXXXXXXXXXXXNKKLKVARNEAEM 731
                          ND          +QED                 K+ K+A+NEAEM
Sbjct: 204 KQERMSRRKRASRNANDIITVQPHTKNIQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEM 263

Query: 732 SNGVKMVAE 758
           S GVK+VA+
Sbjct: 264 SKGVKLVAQ 272


>ref|XP_003588449.1| RNA polymerase sigma-B factor [Medicago truncatula]
           gi|355477497|gb|AES58700.1| RNA polymerase sigma-B
           factor [Medicago truncatula]
          Length = 549

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 70/249 (28%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
 Frame = +3

Query: 60  GRDSSYILARVSAVSVLYSEAET-QNDTSRTQVSSSSHQFFEKYFLETREL-KVAVGKGS 233
           GR++ +   R+S +S +Y E ET Q D  +T   SS+ +  EK  L+  EL KV  GK S
Sbjct: 42  GRETLFNPVRLSLLSTVYEEGETLQKDFRKTFAFSSALEAPEKDLLQGGELTKVNKGKRS 101

Query: 234 ADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLERD 413
              ++ ++ N               S L  + S + LLM+NL +LE  F DS+ +RLE++
Sbjct: 102 LSSVHEMIDN---------------SHLPFEESHFGLLMENLGVLEETFADSEALRLEKN 146

Query: 414 ILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTENVDEPRLNEN----------HXX 563
           I+  L++LGAL LF+                     E V+E + N            H  
Sbjct: 147 IILQLEKLGALELFNVCLTTSFGTSCISNCTHKV-LEQVEENKRNHKVDDYTGKVIVHSS 205

Query: 564 XXXXXXXXXXXXXXXXXXXMEKENDTLQED----XXXXXXXXXXXXXNKKLKVARNEAEM 731
                                   D  QED                 NK+  +A+ E EM
Sbjct: 206 KRKENRRRKRGSVSIAPSSRSLPLDDNQEDPLRSSPASFVKRASNTKNKRAVIAQREVEM 265

Query: 732 SNGVKMVAE 758
           S GVK++AE
Sbjct: 266 SKGVKVLAE 274


>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553990|gb|ESR64004.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 442

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 67/250 (26%), Positives = 104/250 (41%), Gaps = 17/250 (6%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAET--QNDTSRTQVSSSSHQFFEKYFLETRELKVAVGKG 230
           RGR+ S+  AR+S +S +  ++ +  Q+       S  + Q  E  + ET E++      
Sbjct: 33  RGREGSFNSARLSFLSTISEDSASYFQDPVKAYTCSFVNTQTVENDYSETEEIR------ 86

Query: 231 SADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLER 410
                              +KS   I       S +RLLM+NLD+LE  F DSD +RLER
Sbjct: 87  -------------------QKSTSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLER 127

Query: 411 DILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTENVDEPRLNEN---HXXXXXXXX 581
           +IL+ L +LGAL+LF+                 +    + +E ++N++   H        
Sbjct: 128 EILQQLGKLGALKLFN----SHLSRIVKTSNVLDLSDVHTEEQKMNDSRDYHMGKILVPS 183

Query: 582 XXXXXXXXXXXXXMEKENDT---------LQEDXXXXXXXXXXXXXN---KKLKVARNEA 725
                         E+  +T         LQE              N   ++L +ARNEA
Sbjct: 184 KRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEA 243

Query: 726 EMSNGVKMVA 755
           EMS GV++VA
Sbjct: 244 EMSKGVQVVA 253


>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553989|gb|ESR64003.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 534

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 67/250 (26%), Positives = 104/250 (41%), Gaps = 17/250 (6%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAET--QNDTSRTQVSSSSHQFFEKYFLETRELKVAVGKG 230
           RGR+ S+  AR+S +S +  ++ +  Q+       S  + Q  E  + ET E++      
Sbjct: 33  RGREGSFNSARLSFLSTISEDSASYFQDPVKAYTCSFVNTQTVENDYSETEEIR------ 86

Query: 231 SADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLER 410
                              +KS   I       S +RLLM+NLD+LE  F DSD +RLER
Sbjct: 87  -------------------QKSTSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLER 127

Query: 411 DILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTENVDEPRLNEN---HXXXXXXXX 581
           +IL+ L +LGAL+LF+                 +    + +E ++N++   H        
Sbjct: 128 EILQQLGKLGALKLFN----SHLSRIVKTSNVLDLSDVHTEEQKMNDSRDYHMGKILVPS 183

Query: 582 XXXXXXXXXXXXXMEKENDT---------LQEDXXXXXXXXXXXXXN---KKLKVARNEA 725
                         E+  +T         LQE              N   ++L +ARNEA
Sbjct: 184 KRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEA 243

Query: 726 EMSNGVKMVA 755
           EMS GV++VA
Sbjct: 244 EMSKGVQVVA 253


>ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|567917506|ref|XP_006450759.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553984|gb|ESR63998.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553985|gb|ESR63999.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 383

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 67/250 (26%), Positives = 104/250 (41%), Gaps = 17/250 (6%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAET--QNDTSRTQVSSSSHQFFEKYFLETRELKVAVGKG 230
           RGR+ S+  AR+S +S +  ++ +  Q+       S  + Q  E  + ET E++      
Sbjct: 33  RGREGSFNSARLSFLSTISEDSASYFQDPVKAYTCSFVNTQTVENDYSETEEIR------ 86

Query: 231 SADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLER 410
                              +KS   I       S +RLLM+NLD+LE  F DSD +RLER
Sbjct: 87  -------------------QKSTSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLER 127

Query: 411 DILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTENVDEPRLNEN---HXXXXXXXX 581
           +IL+ L +LGAL+LF+                 +    + +E ++N++   H        
Sbjct: 128 EILQQLGKLGALKLFN----SHLSRIVKTSNVLDLSDVHTEEQKMNDSRDYHMGKILVPS 183

Query: 582 XXXXXXXXXXXXXMEKENDT---------LQEDXXXXXXXXXXXXXN---KKLKVARNEA 725
                         E+  +T         LQE              N   ++L +ARNEA
Sbjct: 184 KRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEA 243

Query: 726 EMSNGVKMVA 755
           EMS GV++VA
Sbjct: 244 EMSKGVQVVA 253


>ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|567917512|ref|XP_006450762.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553983|gb|ESR63997.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553988|gb|ESR64002.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 381

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 67/250 (26%), Positives = 104/250 (41%), Gaps = 17/250 (6%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAET--QNDTSRTQVSSSSHQFFEKYFLETRELKVAVGKG 230
           RGR+ S+  AR+S +S +  ++ +  Q+       S  + Q  E  + ET E++      
Sbjct: 33  RGREGSFNSARLSFLSTISEDSASYFQDPVKAYTCSFVNTQTVENDYSETEEIR------ 86

Query: 231 SADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLER 410
                              +KS   I       S +RLLM+NLD+LE  F DSD +RLER
Sbjct: 87  -------------------QKSTSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLER 127

Query: 411 DILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTENVDEPRLNEN---HXXXXXXXX 581
           +IL+ L +LGAL+LF+                 +    + +E ++N++   H        
Sbjct: 128 EILQQLGKLGALKLFN----SHLSRIVKTSNVLDLSDVHTEEQKMNDSRDYHMGKILVPS 183

Query: 582 XXXXXXXXXXXXXMEKENDT---------LQEDXXXXXXXXXXXXXN---KKLKVARNEA 725
                         E+  +T         LQE              N   ++L +ARNEA
Sbjct: 184 KRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEA 243

Query: 726 EMSNGVKMVA 755
           EMS GV++VA
Sbjct: 244 EMSKGVQVVA 253


>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
           gi|462419859|gb|EMJ24122.1| hypothetical protein
           PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 18/252 (7%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAETQNDTSRTQVS--SSSHQFFEKYFLETRELKVAVGKG 230
           RGR+ S+  AR+S +SV+  E E  +       +  S+S Q  E    E  E+K A  + 
Sbjct: 34  RGREGSFNSARLSFLSVISEEGEASSKDPLKVYTFPSASPQILEDGVSELEEVKTAFRRV 93

Query: 231 SADGLYRLLGNDNQSSNDKEKSAFVISSLGMQA---SQYRLLMKNLDMLEYMFTDSDVVR 401
                     +DNQ    + K    ISS G++A   S + LL++NL++LE  F  SDV++
Sbjct: 94  PKSF------SDNQMPVAEGK---FISSKGLEACTASHFSLLLQNLNVLEETFATSDVLK 144

Query: 402 LERDILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTENVDEPRLNENHXXXXXXXX 581
           LE++IL  L RLGAL+LFD                 + PT  V+E ++            
Sbjct: 145 LEKEILLQLARLGALKLFD-ICLSRTLKTSSFLDLSDIPTVPVEEGKMERKEDNNVGEII 203

Query: 582 XXXXXXXXXXXXXMEKENDTLQED-------------XXXXXXXXXXXXXNKKLKVARNE 722
                           +N  +  +                          +++L +++NE
Sbjct: 204 VRSGKKEERRSRKRTSDNAIVSSNSLPPKTIWKGLKKPTLSSGKRASNYRSRRLTISKNE 263

Query: 723 AEMSNGVKMVAE 758
           AEMS GVK++A+
Sbjct: 264 AEMSIGVKVIAD 275


>emb|CAD20832.1| sigma factor [Spinacia oleracea]
          Length = 548

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 8/242 (3%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAET-QNDTSRTQVSSSSHQFFEKYFLETRELKVAVGKGS 233
           RG++  +  AR+S +++ + E+ET + DT R    SSS     +   +   L+  + K S
Sbjct: 34  RGKELDFGSARLSLLTIGFDESETLRKDTLRPHAGSSSVPLTVEN--DYSNLETTISKRS 91

Query: 234 ADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLERD 413
              L     +D +  +D++ S +V S     AS +  LM N+++LE   +DS++++LE+D
Sbjct: 92  CKDLI----SDTEVLSDRDVSVYVRSVQSCSASHFHTLMANINLLENKVSDSELLKLEKD 147

Query: 414 ILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTENVDEPRLNENHXXXXXXXXXXXX 593
           IL  L RLGAL+LF                       NV +    +              
Sbjct: 148 ILVQLGRLGALQLFHACLSRIIDMSDLPGLITEDGKANVRKDNELKKKLVFSKRKEERKL 207

Query: 594 XXXXXXXXXMEKENDTLQEDXXXXXXXXXXXXXNKKLK-------VARNEAEMSNGVKMV 752
                      K      E               KK K       +A+NEAEMS G+K+V
Sbjct: 208 RQERRLQASTSKRCACKSESSIESSIHHVVSTAAKKTKARGRRAIIAKNEAEMSRGIKVV 267

Query: 753 AE 758
           A+
Sbjct: 268 AQ 269


>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
           subsp. vesca]
          Length = 545

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 10/244 (4%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAETQNDTSRTQVS--SSSHQFFEKYFLETRELKVAVGKG 230
           RGR+ S+  A +S +SV+  E ET +       +  S+S Q  +    E  E K+   + 
Sbjct: 34  RGREGSFSSAGLSFLSVISEECETSSKDPLKVYTCPSASPQLLDDGLSEMEE-KMNPRRM 92

Query: 231 SADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLER 410
           S  G   ++       +DKE S   +SS G++ S Y LL++NL++LE  F DS V +LE+
Sbjct: 93  SKSGSANMI-------DDKEYS--FMSSAGLRTSHYTLLLQNLNVLEETFADSGVSKLEK 143

Query: 411 DILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTENVDEPRLNENHXXXXXXXXXXX 590
           +IL  L RLGAL+LF+                 + PTE +++ +    +           
Sbjct: 144 EILLQLGRLGALKLFE-ICLSRTLKTSSFLDLSDIPTEPIEKHKTERKN--IVRSGKKEE 200

Query: 591 XXXXXXXXXXMEKENDTLQ--------EDXXXXXXXXXXXXXNKKLKVARNEAEMSNGVK 746
                      +K + TL         +              +++L +A+NEAEMS GVK
Sbjct: 201 QKSRKRTSYDSKKFSGTLPVKQMREGFKKPNPSSVRRASNSRSRRLMMAKNEAEMSVGVK 260

Query: 747 MVAE 758
           ++A+
Sbjct: 261 VIAD 264


>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
          Length = 534

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 65/246 (26%), Positives = 101/246 (41%), Gaps = 13/246 (5%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAET--QNDTSRTQVSSSSHQFFEKYFLETRELKVAVGKG 230
           RGR+ S+  AR+S +S +  ++ +  Q+       S  + Q  E  + ET E++      
Sbjct: 33  RGREGSFNSARLSFLSTISEDSASYFQDPVKAYTCSFVNTQTVENDYSETEEIR------ 86

Query: 231 SADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLER 410
                              +KS   I       S +RLLM+NLD+LE  F DSD +RLER
Sbjct: 87  -------------------QKSTSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLER 127

Query: 411 DILEHLQRLGALRLFD-XXXXXXXXXXXXXXXXXNAPTENVDEPR-------LNENHXXX 566
           +IL+ L +LGAL+LF+                  +   + +D+ R       L  +    
Sbjct: 128 EILQQLGKLGALKLFNSHLSRIVKTSNVLDLSDVHTEEQKMDDSRDYHMGKILVPSKRKG 187

Query: 567 XXXXXXXXXXXXXXXXXXMEKENDTLQEDXXXXXXXXXXXXXN---KKLKVARNEAEMSN 737
                             +   ++ LQE              N   ++L +ARNEAEMS 
Sbjct: 188 KRKLKTARVSEESIETYLLSLPSEALQEGLKQPTIFSAERALNSRGRRLMIARNEAEMSK 247

Query: 738 GVKMVA 755
           GV++VA
Sbjct: 248 GVQVVA 253


>ref|XP_006450755.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|567917500|ref|XP_006450756.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|567917508|ref|XP_006450760.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|567917510|ref|XP_006450761.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553981|gb|ESR63995.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553982|gb|ESR63996.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553986|gb|ESR64000.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
           gi|557553987|gb|ESR64001.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 286

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 66/249 (26%), Positives = 103/249 (41%), Gaps = 17/249 (6%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAET--QNDTSRTQVSSSSHQFFEKYFLETRELKVAVGKG 230
           RGR+ S+  AR+S +S +  ++ +  Q+       S  + Q  E  + ET E++      
Sbjct: 33  RGREGSFNSARLSFLSTISEDSASYFQDPVKAYTCSFVNTQTVENDYSETEEIR------ 86

Query: 231 SADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLER 410
                              +KS   I       S +RLLM+NLD+LE  F DSD +RLER
Sbjct: 87  -------------------QKSTSCIGQDASSRSDFRLLMENLDVLESTFADSDALRLER 127

Query: 411 DILEHLQRLGALRLFDXXXXXXXXXXXXXXXXXNAPTENVDEPRLNEN---HXXXXXXXX 581
           +IL+ L +LGAL+LF+                 +    + +E ++N++   H        
Sbjct: 128 EILQQLGKLGALKLFN----SHLSRIVKTSNVLDLSDVHTEEQKMNDSRDYHMGKILVPS 183

Query: 582 XXXXXXXXXXXXXMEKENDT---------LQEDXXXXXXXXXXXXXN---KKLKVARNEA 725
                         E+  +T         LQE              N   ++L +ARNEA
Sbjct: 184 KRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEA 243

Query: 726 EMSNGVKMV 752
           EMS GV++V
Sbjct: 244 EMSKGVQVV 252


>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
           gi|222854562|gb|EEE92109.1| hypothetical protein
           POPTR_0006s25090g [Populus trichocarpa]
          Length = 559

 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAETQNDTS-RTQVSSSSHQFFEKYFLETRELKVAVGKGS 233
           RG ++S   AR+S +SV+  E +  N  S ++   SS+ Q  E   L+   LK+ V K S
Sbjct: 33  RGMEASVNQARLSFLSVVSEEGDILNKHSFKSFACSSAAQNVENDCLQMERLKMNVDKTS 92

Query: 234 ADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLERD 413
              +  ++GND  S  ++  ++       M  S+   L+ NLD LE +  D D ++LERD
Sbjct: 93  HVSINNMMGNDKVSVEEEISTSHTRLRERM-TSRISFLLDNLDTLEKLVADLDALKLERD 151

Query: 414 ILEHLQRLGALRLFD 458
           IL  L RLGAL  F+
Sbjct: 152 ILLQLGRLGALEFFN 166


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 560

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
 Frame = +3

Query: 57  RGRDSSYILARVSAVSVLYSEAE-TQNDTSRTQVSSSSHQFFEKYFLETRELKVAVGKGS 233
           RGR+++   +R+S +SV+  E +    D  +T   S + Q  E    +    KV  GK S
Sbjct: 34  RGREATSYQSRLSFLSVISEEGDIAHRDPLKTYAYSYAVQTVENEHSQGEGFKVNFGKRS 93

Query: 234 ADGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLERD 413
             GL  ++G+   S   KE      SS   + S++ LL++NL++LE  F DSD  +LE D
Sbjct: 94  HFGL-NIIGDAEVSL--KEDIFVSPSSTKERTSRFSLLLENLNILEQSFADSDASKLEED 150

Query: 414 ILEHLQRLGALRLFD 458
           IL  L +LGAL+LF+
Sbjct: 151 ILLQLGKLGALKLFN 165


>ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC isoform X3 [Glycine
           max]
          Length = 459

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
 Frame = +3

Query: 63  RDSSYILARVSAVSVLYSEAET-QNDTSRT-QVSSSSHQFFEKYFLETRELKVAVGKGSA 236
           R++ +   R+S  S  Y E E  Q D  R    SSS+ +  E   L   E +V  GK S 
Sbjct: 40  RETCFNFTRLSFPSTFYEEGEALQKDFGRVFAFSSSALETLENDSLGREETQVNKGKRSL 99

Query: 237 DGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLERDI 416
             +++++  DN      E S         +A  +RLLM+NL +LE  F DS+ +RLE+ I
Sbjct: 100 SSVHKMI--DNTQMPFGEVSTVSKKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAI 157

Query: 417 LEHLQRLGALRLFD 458
           +  L +LGAL LF+
Sbjct: 158 ILQLGKLGALELFN 171


>ref|XP_006601059.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Glycine
           max]
          Length = 476

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
 Frame = +3

Query: 63  RDSSYILARVSAVSVLYSEAET-QNDTSRT-QVSSSSHQFFEKYFLETRELKVAVGKGSA 236
           R++ +   R+S  S  Y E E  Q D  R    SSS+ +  E   L   E +V  GK S 
Sbjct: 40  RETCFNFTRLSFPSTFYEEGEALQKDFGRVFAFSSSALETLENDSLGREETQVNKGKRSL 99

Query: 237 DGLYRLLGNDNQSSNDKEKSAFVISSLGMQASQYRLLMKNLDMLEYMFTDSDVVRLERDI 416
             +++++  DN      E S         +A  +RLLM+NL +LE  F DS+ +RLE+ I
Sbjct: 100 SSVHKMI--DNTQMPFGEVSTVSKKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAI 157

Query: 417 LEHLQRLGALRLFD 458
           +  L +LGAL LF+
Sbjct: 158 ILQLGKLGALELFN 171