BLASTX nr result
ID: Mentha24_contig00008716
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha24_contig00008716 (3208 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus... 2016 0.0 ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 1966 0.0 ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 1964 0.0 ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 1941 0.0 ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [S... 1909 0.0 ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A... 1909 0.0 gb|AFW57310.1| RNA polymerase II large subunit family protein [Z... 1908 0.0 ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun... 1907 0.0 ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su... 1905 0.0 ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su... 1904 0.0 ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1904 0.0 ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II su... 1902 0.0 ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su... 1902 0.0 ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II su... 1902 0.0 ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ... 1902 0.0 ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II su... 1900 0.0 ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phas... 1897 0.0 ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su... 1897 0.0 ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su... 1897 0.0 ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su... 1897 0.0 >gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus guttatus] Length = 1842 Score = 2016 bits (5223), Expect = 0.0 Identities = 997/1068 (93%), Positives = 1029/1068 (96%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+K VLSILRCVCFNCSKILA+ EEPKFKQAMRIRNPKNRL+KIL+ACK+K+ Sbjct: 86 AKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPKFKQAMRIRNPKNRLRKILDACKNKT 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KC+GGDEIDGH QDTEEPVKKSRGGCGAQQPK+++DGMK+VA+YK QMPEP Sbjct: 146 KCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISIDGMKMVAEYKLQKKKSDDQDQMPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ LSAEKVLSILKRITDEDC+ LGLNPKFARPDWMILQVL PSVMMDTS Sbjct: 206 VERKQQLSAEKVLSILKRITDEDCQLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 +RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDN+LPGQPRAT Sbjct: 266 ARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV Sbjct: 386 YPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTFI+KDVFMNILMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+QINLLRYSAWHQE EKGFITPGDTQVRI Sbjct: 566 WEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQETEKGFITPGDTQVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELL+GTLCKK LG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG Sbjct: 626 EKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM KI+ETI+ AKNEV ELIRAAQEKQLE EPGRTMMESFENRVNQVLNKARD Sbjct: 686 DTIADAATMEKINETISNAKNEVKELIRAAQEKQLEPEPGRTMMESFENRVNQVLNKARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF Sbjct: 746 DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLK+ DFNDMYKYEID NWN Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKKSDFNDMYKYEIDNSNWN 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 PNYMLPEAVEDLKTIREIRSVFDAEV KLE DRFQLGTEIATTGDNSWPLPVNIKRLVLN Sbjct: 926 PNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDRFQLGTEIATTGDNSWPLPVNIKRLVLN 985 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF+VDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLS EAQKNATLFFNILLRSAL Sbjct: 986 AQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSTEAQKNATLFFNILLRSAL 1045 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVLKEYRLTREAF+WV+GEIESRFLQSLVAAGEMIGCVAAQSIGE Sbjct: 1046 ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIGE 1093 >ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum lycopersicum] Length = 1846 Score = 1966 bits (5093), Expect = 0.0 Identities = 966/1068 (90%), Positives = 1018/1068 (95%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMANMA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+K VLSILRCVCFNCSKILA+ ++PKFKQAMRIRNPKNRL+K+L+ACK+K+ Sbjct: 86 AKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKNRLRKMLDACKNKT 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGDEID GQDTEEPVKKSRGGCGAQQPK+++DGMK+VA+YK QMPEP Sbjct: 146 KCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISIDGMKMVAEYKMQKKKSDDPEQMPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ LSAE+VLSILKR++DEDC LGLNP+FARPDWMILQ L PSVMMDTS Sbjct: 206 VERKQQLSAERVLSILKRVSDEDCLLLGLNPEFARPDWMILQALPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+ATYFDNDLPGQPRAT Sbjct: 266 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIATYFDNDLPGQPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRK+TKRDTFI+KDVFMNILMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+QINLLRYSAWH + EKG+ITPGDTQVRI Sbjct: 566 WEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSEKGYITPGDTQVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ AFS+GIG Sbjct: 626 EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM KI+ETI+ AK +V ELI+AAQEK LEAEPGRTMMESFENRVNQVLNKARD Sbjct: 686 DTIADASTMEKINETISNAKAKVKELIKAAQEKLLEAEPGRTMMESFENRVNQVLNKARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPHF Sbjct: 746 DAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q L+SLK K+ F+DMY YEID PNWN Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKGTFDDMYAYEIDDPNWN 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 P+YMLPEAVEDLK IREIRSVFDAEVQKLEADR QLGTEIA TGDNSWPLPVNI+RLVLN Sbjct: 926 PSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNSWPLPVNIQRLVLN 985 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF++DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLS+EAQKNATLFFNILLRSAL Sbjct: 986 AQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKNATLFFNILLRSAL 1045 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVLKEYRL+REAF+WVVGEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1046 ASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093 >ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum tuberosum] Length = 1839 Score = 1964 bits (5088), Expect = 0.0 Identities = 965/1068 (90%), Positives = 1017/1068 (95%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMANMA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+K VLSILRCVCFNCSKILA+ ++PKFKQAMRIRNPKNRL+K+L+ACK+K+ Sbjct: 86 AKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKNRLRKMLDACKNKT 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGDEID G DTEEPVKKSRGGCGAQQPK+++DGMK+VA+YK QMPEP Sbjct: 146 KCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISIDGMKMVAEYKMQKKKSDDPEQMPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ LSAE+VLSILKR++DEDC LGLNP+FARPDWMILQ L PSVMMDTS Sbjct: 206 VERKQQLSAERVLSILKRVSDEDCLLLGLNPEFARPDWMILQALPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+ATYFDNDLPGQPRAT Sbjct: 266 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIATYFDNDLPGQPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRK+TKRDTFI+KDVFMNILMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+QINLLRYSAWH + EKG+ITPGDTQVRI Sbjct: 566 WEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSEKGYITPGDTQVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ AFS+GIG Sbjct: 626 EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM KI+ETI+ AK +V ELI+AAQEK LEAEPGRTMMESFENRVNQVLNKARD Sbjct: 686 DTIADASTMEKINETISNAKAKVKELIKAAQEKLLEAEPGRTMMESFENRVNQVLNKARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPHF Sbjct: 746 DAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q L+SLK K+ F+DMY YEID PNWN Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKGTFDDMYAYEIDDPNWN 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 P+YMLPEAVEDLK IREIRSVFDAEVQKLEADR QLGTEIA TGDNSWPLPVNI+RLVLN Sbjct: 926 PSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNSWPLPVNIQRLVLN 985 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF++DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLS+EAQKNATLFFNILLRSAL Sbjct: 986 AQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKNATLFFNILLRSAL 1045 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVLKEYRL+REAF+WVVGEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1046 ASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093 >ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis vinifera] Length = 1848 Score = 1941 bits (5028), Expect = 0.0 Identities = 952/1068 (89%), Positives = 1012/1068 (94%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVV IEHSETTERGKPK GGLSDPRLGTIDRKMKCETC ANMA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+KTVLSI+RCVCFNCSKILA+ E+ KFKQA +IRNPKNRLKKIL+ACK+KS Sbjct: 86 AKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQAQKIRNPKNRLKKILDACKNKS 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGDEI+ D++EPVKKSRGGCGAQQPKLT++GMK++A+YK Q+PEP Sbjct: 146 KCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTIEGMKMIAEYKIQRKKNDDPEQLPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ LSAE+VL++LKRI+DEDC LGLNPK+ARPDWMILQVL PSVMMDTS Sbjct: 206 VERKQQLSAERVLNVLKRISDEDCILLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQFHVATYFDN+LPGQPRAT Sbjct: 266 SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLKKSSD HLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI+KDVFMNILMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+QINLLR SAWH E E GFITPGDTQVRI Sbjct: 566 WEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FS+GIG Sbjct: 626 EKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM KI+ETI+KAKNEV ELIRAAQE+QLEAEPGRTMMESFENRVNQVLNKARD Sbjct: 686 DTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMESFENRVNQVLNKARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF+DRTLPHF Sbjct: 746 DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q L+SLK+K+ +F+ ++KYEID NWN Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWN 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 P+YMLPE VEDLKTIRE R+VFDAEVQKLEADRFQLGTEIATTGDNSWP+PVN+KRL+ N Sbjct: 926 PSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNSWPMPVNLKRLIWN 985 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF+VD RRPSDMHPMEIVEAVDKLQERLKVV GDD +S+EAQKNATLFFNILLRS Sbjct: 986 AQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLISMEAQKNATLFFNILLRSTF 1045 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVLKEYRLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1046 ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093 >ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor] gi|241940227|gb|EES13372.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor] Length = 1857 Score = 1909 bits (4946), Expect = 0.0 Identities = 930/1068 (87%), Positives = 1005/1068 (94%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVV IEH+ET ERGKPK GGLSDPRLGTIDRK+KCETCMA MA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTIDRKIKCETCMAGMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGFIKTVLSI+RCVCFNCSKILA+ +E KFKQA++IRNPKNRLK+I +ACKSK Sbjct: 86 AKPMFHIGFIKTVLSIMRCVCFNCSKILADEDETKFKQALKIRNPKNRLKRIYDACKSKK 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 C GGD++D QDT+EPVKK RGGCGAQQP +T+DGMK+VA++KA Q+PEP Sbjct: 146 VCAGGDDLDVQEQDTDEPVKK-RGGCGAQQPNITVDGMKMVAEFKAPKKKSDDQDQLPEP 204 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQILSAE+VL++LKRI+DEDC LGLNPK+ARPDWMILQVL PSVMMDTS Sbjct: 205 VERKQILSAERVLNVLKRISDEDCLLLGLNPKYARPDWMILQVLPVPPPPVRPSVMMDTS 264 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQLLQFH+ATYFDN+LPGQPRAT Sbjct: 265 SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRAT 324 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LGVPWSIALNLT Sbjct: 325 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLT 384 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+KKSSDQHLELGYKV Sbjct: 385 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKV 444 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 445 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 504 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT I+KDVFMNILMW Sbjct: 505 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMW 564 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 W+DFDGK+PAP ILKP+P+WTGKQVFNLIIP+QINL+R+SAWH E EKGFITPGDT VRI Sbjct: 565 WQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSAWHSEEEKGFITPGDTMVRI 624 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELLSGTLCKK+LG+ +GSLIH+IWEEVGPDAARKFLGHTQWLVNYWLLQN FS+GIG Sbjct: 625 EKGELLSGTLCKKSLGTGTGSLIHIIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIG 684 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM I++TI KAK+EV ELI+ A EKQLEAEPGRTMMESFENRVNQVLNKARD Sbjct: 685 DTIADASTMQTINDTICKAKDEVKELIKKAHEKQLEAEPGRTMMESFENRVNQVLNKARD 744 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPHF Sbjct: 745 DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 804 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 805 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 864 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F+++++YE+D NW Sbjct: 865 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKPEFDNLFRYELDDENWR 924 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 PNYMLPE V+DLKTIRE R+VF+AEVQKLEADR+QLGTEIATTGDNSWP+PVN+KRL+ N Sbjct: 925 PNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGDNSWPMPVNLKRLIWN 984 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTFR+DFRRPSDMHPMEIVEAVDKLQERLKVV GDD +S+EAQKNATLFFNILLRS Sbjct: 985 AQKTFRIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDPMSIEAQKNATLFFNILLRSTF 1044 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1045 ASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1092 >ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda] gi|548833823|gb|ERM96260.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda] Length = 1844 Score = 1909 bits (4945), Expect = 0.0 Identities = 940/1071 (87%), Positives = 1004/1071 (93%), Gaps = 3/1071 (0%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 +EIR MSVV I+HSET ERGKPK GLSDPRLGTIDRKMKC+TC ANMA+CPGHFGHLEL Sbjct: 26 EEIRNMSVVEIQHSETMERGKPKPSGLSDPRLGTIDRKMKCDTCTANMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+KTVLSI+RCVCFNCS+ILA+ E+ +FKQA++IRNPK RLKK+L+ CK+K+ Sbjct: 86 AKPMFHIGFLKTVLSIMRCVCFNCSRILADEEDHRFKQALKIRNPKTRLKKVLDCCKNKT 145 Query: 2846 KCEGGDEID-GHGQDTEEPVKKSR-GGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQM- 2676 KCEGGD+ID QD+EE VKK R GGCGAQQPK+T++GMK+VA+YK QM Sbjct: 146 KCEGGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKITIEGMKMVAEYKLPRKKNDEQEQML 205 Query: 2675 PEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMM 2496 PEPVERKQ L+AEKVL++LKRITDEDC+ LGLNPK+ARPDWMILQV+ PSVMM Sbjct: 206 PEPVERKQQLAAEKVLNVLKRITDEDCQLLGLNPKYARPDWMILQVMPIPPPPVRPSVMM 265 Query: 2495 DTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQP 2316 DTSSRSEDDLTHQLAM+IRHNENLKRQE+NGAPAHIISEFAQLLQFHVATYFDN+LPGQP Sbjct: 266 DTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAHIISEFAQLLQFHVATYFDNELPGQP 325 Query: 2315 RATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIAL 2136 RATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LGVPWSIAL Sbjct: 326 RATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIAL 385 Query: 2135 NLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELG 1956 NLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLKKS D HLELG Sbjct: 386 NLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKKSGDHHLELG 445 Query: 1955 YKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNM 1776 YKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNM Sbjct: 446 YKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNM 505 Query: 1775 HVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNI 1596 HVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI+KDVFMNI Sbjct: 506 HVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNI 565 Query: 1595 LMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQ 1416 LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+QINL+RYSAWH E E GFITPGDT Sbjct: 566 LMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRYSAWHSESESGFITPGDTC 625 Query: 1415 VRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSM 1236 VRIE+GELLSGTLCKKTLG+SSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ AFS+ Sbjct: 626 VRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSI 685 Query: 1235 GIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNK 1056 GIGDTIAD TM KI+ETI+KAKNEV ELI+AAQEKQLEAEPGRTMMESFENRVNQVLNK Sbjct: 686 GIGDTIADAATMEKINETISKAKNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNK 745 Query: 1055 ARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTL 876 ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF DRTL Sbjct: 746 ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFNDRTL 805 Query: 875 PHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKA 696 PHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKA Sbjct: 806 PHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKA 865 Query: 695 MEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQP 516 MEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+KR +F ++YKYEIDQ Sbjct: 866 MEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRAEFENVYKYEIDQE 925 Query: 515 NWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRL 336 NW+P+YMLPE VEDLKTIRE ++VFDAEVQKLEADR QLGTEI TTGDNSWP+PVN+KRL Sbjct: 926 NWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEADRHQLGTEITTTGDNSWPMPVNLKRL 985 Query: 335 VLNAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLR 156 + NAQK F+VD RRPSDMHPMEIVEAVDKLQERLKVV GDD +S+EAQKNATLFFNILLR Sbjct: 986 IWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLMSIEAQKNATLFFNILLR 1045 Query: 155 SALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 S ASKRVLKEYRLTREAFDWV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1046 STFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1096 >gb|AFW57310.1| RNA polymerase II large subunit family protein [Zea mays] Length = 1850 Score = 1908 bits (4943), Expect = 0.0 Identities = 927/1068 (86%), Positives = 1004/1068 (94%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSV+ IEH+ET ERGKPK GGLSDPRLGTIDRK+KCETCMA MA+CPGHFGHLEL Sbjct: 26 DEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTIDRKIKCETCMAGMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGFIKTVLSI+RCVCFNCSKILA+ +E KFKQA++IRNPKNRLK+I +ACKSK Sbjct: 86 AKPMFHIGFIKTVLSIMRCVCFNCSKILADEDETKFKQALKIRNPKNRLKRIYDACKSKK 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 C GGD++D QDT+EP+KK RGGCGAQQP +T+DGMK+VA++KA Q+PEP Sbjct: 146 VCAGGDDLDVQEQDTDEPIKK-RGGCGAQQPNITVDGMKMVAEFKAPKKKTDDQDQLPEP 204 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQILSAE+VL++LKRI+DEDC LGLNPK+ARPDWMILQVL PSVMMDTS Sbjct: 205 VERKQILSAERVLNVLKRISDEDCLLLGLNPKYARPDWMILQVLPVPPPPVRPSVMMDTS 264 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQLLQFH+ATYFDNDLPGQPRAT Sbjct: 265 SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNDLPGQPRAT 324 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LGVPWSIALNLT Sbjct: 325 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLT 384 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+KKSSDQHLELGYKV Sbjct: 385 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYKV 444 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 445 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 504 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT I+KDVFMNILMW Sbjct: 505 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILMW 564 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 W+DFDGK+PAPTILKP+P+WTGKQVFNLIIP+QINL+R+SAWH E EKGFITPGDT VRI Sbjct: 565 WQDFDGKIPAPTILKPRPIWTGKQVFNLIIPKQINLIRFSAWHSEEEKGFITPGDTMVRI 624 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELLSGTLCKK+LG+ SGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FS+GIG Sbjct: 625 EKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIG 684 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM I++TI+KAKN V ELI+ A EKQLEAEPGRTMMESFENRVNQVLNKARD Sbjct: 685 DTIADASTMETINDTISKAKNAVKELIKKAHEKQLEAEPGRTMMESFENRVNQVLNKARD 744 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAGSSAQ SL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPHF Sbjct: 745 DAGSSAQNSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 804 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 805 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 864 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F+++++YE+D NW Sbjct: 865 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKPEFDNVFRYELDDENWR 924 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 PNYMLPE V+DLKTIRE R+VF+AEVQKLEADR+QLG+EI TTGDNSWP+PVN+KRL+ N Sbjct: 925 PNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRYQLGSEITTTGDNSWPMPVNLKRLIWN 984 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF++DFRRPSDMHPMEIVEA+DKLQERLKVV GDD +S+EAQKNATLFFNILLRS Sbjct: 985 AQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRSTF 1044 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1045 ASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1092 >ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein [Populus trichocarpa] gi|550338614|gb|ERP60834.1| DNA-directed RNA polymerase II largest subunit family protein [Populus trichocarpa] Length = 1837 Score = 1907 bits (4940), Expect = 0.0 Identities = 932/1070 (87%), Positives = 1007/1070 (94%), Gaps = 2/1070 (0%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSV+ IEHSETTERGKPK GGLSDPRLGTIDRKMKCETC ANMA+CPGHFGHLEL Sbjct: 26 DEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+KTVLSI+RCVCFNCSKILA+ E+ KFKQA++I+NPK+RLKKIL+ACK+K+ Sbjct: 86 AKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQALKIKNPKSRLKKILDACKNKT 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGDEID GQD EEPVKKSRGGCGAQQPKLT++GMK++A+YK Q+PEP Sbjct: 146 KCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTIEGMKMIAEYKVQRKKSDDQEQLPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ L+AE+VLS+LKRI+DEDC+ LGL+PK+ARPDWMILQVL PSVMMDTS Sbjct: 206 VERKQTLTAERVLSVLKRISDEDCQLLGLDPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENL+RQER+GAPAHIISEFAQLLQFHVATYFDN+LPGQPRAT Sbjct: 266 SRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIISEFAQLLQFHVATYFDNELPGQPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSD HLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI+KDVFMNILMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGKVPAPTI+KP+PLWTGKQVFNLIIP+QINL+R +AWH + E+G ITPGDT VRI Sbjct: 566 WEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQINLIRTAAWHMDSERGMITPGDTLVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELLSGTLCKKTLG+SSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFS+GIG Sbjct: 626 EKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM KI+ETI+ AKNEV +LIR AQ K+LEAEPGRTMMESFENRVNQVLNKARD Sbjct: 686 DTIADASTMEKINETISNAKNEVKDLIRKAQNKELEAEPGRTMMESFENRVNQVLNKARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF+DRTLPHF Sbjct: 746 DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+ +++YE D +WN Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKAEFDRVFRYEFDDEDWN 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 P YM+ + VEDL+ IRE+R VFDAEVQKLEADR+QLGTEIATTGDN+WP+PVN+KRL+ N Sbjct: 926 PTYMMTDHVEDLRNIRELRDVFDAEVQKLEADRYQLGTEIATTGDNTWPMPVNLKRLIWN 985 Query: 326 AQKTFRVDFR--RPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRS 153 AQKTF++D R R SD+HPME VEAVDKLQERLKVV GDD LS+EAQKNATLFF ILLRS Sbjct: 986 AQKTFKIDTRIGRVSDIHPMEAVEAVDKLQERLKVVPGDDLLSVEAQKNATLFFGILLRS 1045 Query: 152 ALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 LASKRVL+EYRL+REAFDWV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1046 TLASKRVLQEYRLSREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1095 >ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine max] Length = 1827 Score = 1905 bits (4934), Expect = 0.0 Identities = 930/1068 (87%), Positives = 1003/1068 (93%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVV IEH ETTERGKPK+GGLSDPRLGTIDRK+KCETC A+MA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTIDRKLKCETCTASMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+KTVL+I+RCVCFNCSKILA+ + KFKQA+RIRNPKNRLKKIL+ACK+KS Sbjct: 86 AKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHKFKQALRIRNPKNRLKKILDACKNKS 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGDEID GQDT+EPVKKSRGGCGAQQPK+T++GMK++A+YKA Q+PEP Sbjct: 146 KCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITIEGMKMIAEYKAQRKKSDDQEQLPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ LSAE+VL +LKRI+DEDC+ LGLNPK+ARPDWMILQVL PSVMMDTS Sbjct: 206 VERKQTLSAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENLKRQERNG+PAHIISEFAQLLQFH+ATYFDN+LPG PRAT Sbjct: 266 SRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSD HLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI KDVFMNILMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+QINL+RYS+WH E E+G ITPGDT VRI Sbjct: 566 WEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQINLIRYSSWHSESERGSITPGDTMVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFS+GIG Sbjct: 626 EKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM I++TI+ AK +V +LIR AQEK+LEAEPGRTMM+SFENRVNQ LN+ARD Sbjct: 686 DTIADASTMETINQTISAAKEKVKQLIREAQEKKLEAEPGRTMMDSFENRVNQTLNRARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF+DRTLPHF Sbjct: 746 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q L+SLK+K+ +F+ +++YE D NW Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKTEFDRVFRYEFDDENWK 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 P YML E VEDLKTIRE R+VF+AEVQKLEADR+QL TEIATTGD+S PLPVN+KRL+ N Sbjct: 926 PTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQLATEIATTGDSSLPLPVNLKRLIWN 985 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF+VDFRRPSDMHPMEIVEA+DKLQERLKVV G+D LS EAQKNATL FNILLRS Sbjct: 986 AQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVPGEDLLSQEAQKNATLLFNILLRSTF 1045 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVL+EYRL+REAF+WVVGEIESRFLQSLVA+GEMIGCVAAQSIGE Sbjct: 1046 ASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 1093 >ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus] Length = 1853 Score = 1904 bits (4932), Expect = 0.0 Identities = 929/1068 (86%), Positives = 998/1068 (93%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTIDRKMKCETC ANMA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+KTVL+I+R VCFNCSKIL + E+PKFKQA+RI+NPKNRL+KIL+ACK+K+ Sbjct: 86 AKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQALRIKNPKNRLRKILDACKNKT 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGDEID GQD+++PVKKSRGGCGAQQPK++++GMK+ A+YKA Q+PEP Sbjct: 146 KCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISIEGMKMTAEYKAQRKKNDDPEQLPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ L+AE+VL ILKRITDEDCK LGLNPK+ARPDWMILQVL PSVMMDTS Sbjct: 206 VERKQTLTAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIISEFAQLLQFH+ATYFDN+LPG PRAT Sbjct: 266 SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSD HLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI KDVFMN LMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNTLMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+QINL R SAWH E E G ITPGDT VRI Sbjct: 566 WEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHITPGDTFVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELLSGTLCKK LG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFS+GIG Sbjct: 626 EKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM KI+ETI+ AKNEV LI+ AQE+ LE EPGRTMM+SFEN+VNQVLNKARD Sbjct: 686 DTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPHF Sbjct: 746 DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F +++YE + NW Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWK 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 PNYMLPE VEDLKTIRE R+VF+AEVQKLEADR+QLGTEIATTG+NSWP+PVN+KRL+ N Sbjct: 926 PNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQN 985 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF++DFRR SDMHPMEIVEA+DKLQERLKVV G+D LS+EAQKNATLFFNILLRS Sbjct: 986 AQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTF 1045 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVL EYRLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1046 ASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093 >ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus] Length = 1832 Score = 1904 bits (4932), Expect = 0.0 Identities = 929/1068 (86%), Positives = 998/1068 (93%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTIDRKMKCETC ANMA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+KTVL+I+R VCFNCSKIL + E+PKFKQA+RI+NPKNRL+KIL+ACK+K+ Sbjct: 86 AKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQALRIKNPKNRLRKILDACKNKT 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGDEID GQD+++PVKKSRGGCGAQQPK++++GMK+ A+YKA Q+PEP Sbjct: 146 KCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISIEGMKMTAEYKAQRKKNDDPEQLPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ L+AE+VL ILKRITDEDCK LGLNPK+ARPDWMILQVL PSVMMDTS Sbjct: 206 VERKQTLTAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIISEFAQLLQFH+ATYFDN+LPG PRAT Sbjct: 266 SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+LGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSD HLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI KDVFMN LMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNTLMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+QINL R SAWH E E G ITPGDT VRI Sbjct: 566 WEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHITPGDTFVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELLSGTLCKK LG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFS+GIG Sbjct: 626 EKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM KI+ETI+ AKNEV LI+ AQE+ LE EPGRTMM+SFEN+VNQVLNKARD Sbjct: 686 DTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPHF Sbjct: 746 DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F +++YE + NW Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWK 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 PNYMLPE VEDLKTIRE R+VF+AEVQKLEADR+QLGTEIATTG+NSWP+PVN+KRL+ N Sbjct: 926 PNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQN 985 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF++DFRR SDMHPMEIVEA+DKLQERLKVV G+D LS+EAQKNATLFFNILLRS Sbjct: 986 AQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTF 1045 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVL EYRLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1046 ASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093 >ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform X1 [Setaria italica] Length = 1852 Score = 1902 bits (4928), Expect = 0.0 Identities = 928/1069 (86%), Positives = 1003/1069 (93%), Gaps = 1/1069 (0%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSV+ IEH+ET ERGKPK GGLSDPRLGTIDRK+KCETCMA MA+CPGHFGHLEL Sbjct: 26 DEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTIDRKIKCETCMAGMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGFIKTVLSI+RCVCFNCSKILA+ ++ KFKQA++IRNPKNRLK+I +ACKSK Sbjct: 86 AKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTKFKQALKIRNPKNRLKRIYDACKSKK 145 Query: 2846 KCEGGDEID-GHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPE 2670 C GGD++D QDT+EPVKK RGGCGAQQP +T+DGMK+VA++KA Q+PE Sbjct: 146 VCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNITVDGMKMVAEFKAPKKKTDDQDQLPE 204 Query: 2669 PVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDT 2490 PVERKQILSAE+VL++LKRI+DEDC LGLNPKFARPDWMILQVL PSVMMDT Sbjct: 205 PVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDT 264 Query: 2489 SSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRA 2310 SSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQLLQFH+ATYFDN+LPGQPRA Sbjct: 265 SSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRA 324 Query: 2309 TQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNL 2130 TQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LGVPWSIALNL Sbjct: 325 TQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNL 384 Query: 2129 TYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYK 1950 TYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+KKSSDQHLELGYK Sbjct: 385 TYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYK 444 Query: 1949 VERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHV 1770 VERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHV Sbjct: 445 VERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHV 504 Query: 1769 PQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILM 1590 PQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT I+KDVFMN LM Sbjct: 505 PQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNTLM 564 Query: 1589 WWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVR 1410 WW+DFDGK+PAP ILKP+P+WTGKQVFNLIIP+QINL+R+SAWH E E GFITPGDT VR Sbjct: 565 WWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSAWHSETETGFITPGDTMVR 624 Query: 1409 IEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGI 1230 IEKGELLSGTLCKK+LG+ SGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ FS+GI Sbjct: 625 IEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGI 684 Query: 1229 GDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKAR 1050 GDTIAD TM KI+ETI+KAKNEV ELI+ AQ+K LEAEPGRTMMESFENRVNQVLNKAR Sbjct: 685 GDTIADAATMEKINETISKAKNEVKELIKQAQDKHLEAEPGRTMMESFENRVNQVLNKAR 744 Query: 1049 DDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPH 870 DDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPH Sbjct: 745 DDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPH 804 Query: 869 FTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAME 690 FTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAME Sbjct: 805 FTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAME 864 Query: 689 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNW 510 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F+++++YE+D NW Sbjct: 865 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENW 924 Query: 509 NPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVL 330 PNYMLPE V+DLKTIRE R+VF+AEVQKLEADRFQLGTEI TTGDNSWP+PVN+KRL+ Sbjct: 925 RPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRFQLGTEITTTGDNSWPMPVNLKRLIW 984 Query: 329 NAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSA 150 NAQKTF++DFRRPSDMHPMEIVEA+DKLQERLKVV GDD +S+EAQKNATLFFNILLRS Sbjct: 985 NAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRST 1044 Query: 149 LASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1045 FASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093 >ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza brachyantha] Length = 1855 Score = 1902 bits (4927), Expect = 0.0 Identities = 930/1069 (86%), Positives = 1002/1069 (93%), Gaps = 1/1069 (0%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVV IEH+ET ERGKPK GGLSDPRLGTIDRK+KCETCMA MA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTIDRKIKCETCMAGMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGFIKTVLSI+RCVCFNCSKILA+ ++ KFKQA++IRNPKNRLK+I +ACKSK Sbjct: 86 AKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTKFKQALKIRNPKNRLKRIYDACKSKK 145 Query: 2846 KCEGGDEID-GHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPE 2670 C GGD++D QDT+EPVK+ RGGCGAQQP +T+DGMK+VA++KA Q+PE Sbjct: 146 VCAGGDDLDVQEQQDTDEPVKR-RGGCGAQQPNITVDGMKMVAEFKAPKKKNDDQEQLPE 204 Query: 2669 PVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDT 2490 PVERKQILSAE+VL++LKRI+DEDC LGLNPKFARPDWMILQVL PSVMMDT Sbjct: 205 PVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDT 264 Query: 2489 SSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRA 2310 SSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQLLQFH+ATYFDN+LPGQPRA Sbjct: 265 SSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRA 324 Query: 2309 TQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNL 2130 TQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LGVPWSIALNL Sbjct: 325 TQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNL 384 Query: 2129 TYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYK 1950 TYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+KKSSDQHLELGYK Sbjct: 385 TYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLELGYK 444 Query: 1949 VERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHV 1770 VERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHV Sbjct: 445 VERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHV 504 Query: 1769 PQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILM 1590 PQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT I+KDVFMNILM Sbjct: 505 PQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILM 564 Query: 1589 WWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVR 1410 WWEDFDGKVPAP ILKP+P+WTGKQVFNLIIP+ INL+R+SAWH E E GFITPGDT VR Sbjct: 565 WWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPINLIRFSAWHSEAETGFITPGDTMVR 624 Query: 1409 IEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGI 1230 IEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FS+GI Sbjct: 625 IEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGI 684 Query: 1229 GDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKAR 1050 GDTIAD TM KI+ETI+ AKNEV ELI+ A +K LEAEPGRTMMESFENRVNQVLNKAR Sbjct: 685 GDTIADAATMEKINETISTAKNEVKELIKQAHDKHLEAEPGRTMMESFENRVNQVLNKAR 744 Query: 1049 DDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPH 870 DDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPH Sbjct: 745 DDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPH 804 Query: 869 FTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAME 690 FTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAME Sbjct: 805 FTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAME 864 Query: 689 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNW 510 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F+ +++YE+D NW Sbjct: 865 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDTVFRYELDDENW 924 Query: 509 NPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVL 330 PNYMLPE VEDLKTIRE R+VF+AEVQKLEADRFQLGTEIATTGDN+WP+PVN+KRL+ Sbjct: 925 RPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIW 984 Query: 329 NAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSA 150 NAQKTF++D RRPSDMHPMEIVEA+DKLQERLKVV GDD +S+EAQKNATLFFNILLRS Sbjct: 985 NAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRST 1044 Query: 149 LASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1045 FASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093 >ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer arietinum] Length = 1834 Score = 1902 bits (4927), Expect = 0.0 Identities = 929/1068 (86%), Positives = 1003/1068 (93%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVV IEH ETTERGKPKIGGLSDPRLGTIDRKMKCETC A+MA+CPGHFG+LEL Sbjct: 26 DEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTIDRKMKCETCTASMAECPGHFGYLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+KTVLSI+RCVCFNCSKILA+ ++ KFKQA+RI++PKNRL+KIL+ACK+K+ Sbjct: 86 AKPMFHIGFLKTVLSIMRCVCFNCSKILADEQDHKFKQALRIKSPKNRLRKILDACKNKT 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGD+ID G DTEEPVKKSRGGCGAQQPK+T++GMK++A+YKA Q+PEP Sbjct: 146 KCEGGDDIDMPGHDTEEPVKKSRGGCGAQQPKITIEGMKMIAEYKAQRKKSDDQEQLPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ LSAE+VL +LKRI+DEDC+ LGLNPK+ARPDW+ILQVL PSVMMDTS Sbjct: 206 VERKQTLSAERVLGVLKRISDEDCQLLGLNPKYARPDWLILQVLPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENLKRQERNG+PAHIISEFAQLLQFH+ATYFDN+LPG PRAT Sbjct: 266 SRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSD HLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD+LLGCRKITKRDTFI KDVFMNILMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDSLLGCRKITKRDTFISKDVFMNILMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGKVP PTILKP+P+WTGKQVFNLIIP+QINL+RYS+WH E EKG ITPGDT VRI Sbjct: 566 WEDFDGKVPTPTILKPEPMWTGKQVFNLIIPKQINLIRYSSWHNENEKGPITPGDTMVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFS+GIG Sbjct: 626 EKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM I++TI++AK +V +LIR AQEK+LEAEPGRTMMESFENRVNQ LN+ARD Sbjct: 686 DTIADASTMETINQTISQAKEKVKQLIREAQEKKLEAEPGRTMMESFENRVNQTLNRARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPHF Sbjct: 746 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q L+SLK+K+ DF+ ++YE D NW Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKADFDRAFRYEFDDENWK 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 P YML E VEDLKTIRE R+VF+AEVQKL+ADRFQL TEIATTGD+S PLPVN+KRL+ N Sbjct: 926 PTYMLEEPVEDLKTIREFRNVFEAEVQKLDADRFQLATEIATTGDSSLPLPVNLKRLIWN 985 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF+VDFRRPSDMHPMEIVEA+DKLQERLKVV GDD LS EAQKNATL FNILLRS Sbjct: 986 AQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVPGDDLLSQEAQKNATLLFNILLRSTF 1045 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVL+EYRL+REAF+WVVGEIESRFLQSLVA+GEMIGCVAAQSIGE Sbjct: 1046 ASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 1093 >ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma cacao] gi|590702285|ref|XP_007046586.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma cacao] gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma cacao] gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma cacao] gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma cacao] Length = 1861 Score = 1902 bits (4926), Expect = 0.0 Identities = 932/1069 (87%), Positives = 1004/1069 (93%), Gaps = 1/1069 (0%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVV IEH ETTERGKPK+GGLSDPRLGTIDRKMKCETC ANMA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+KTVLSI+RCVCFNCSKILA+ EE KFKQA++I+NPKNRLKKIL+ACK+KS Sbjct: 86 AKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHKFKQALKIKNPKNRLKKILDACKNKS 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGDEID GQDTEEPVKKSRGGCGAQQPKL++DGMK++A+YK Q+PEP Sbjct: 146 KCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSIDGMKMIAEYKPQRKRNDDQEQLPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ L+AE+VLS+LKRI+DEDC+ LGLNPKFARPDWMILQVL PSVMMDTS Sbjct: 206 VERKQTLTAERVLSVLKRISDEDCQLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTH LAMIIRHNENL+RQERNG+PAHIISEFAQLLQFHVATYFDN+LPG PRAT Sbjct: 266 SRSEDDLTHALAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHVATYFDNELPGLPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSD HLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI+KDVFMNILMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+QINLLR SAWH E E GFITPGDTQVRI Sbjct: 566 WEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRNSAWHSETETGFITPGDTQVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELLSGTLCKK LG+SSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFS+GIG Sbjct: 626 EKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM KI+ETI+KAK EV LI AQ K LE EPGRTMMESFEN+VNQVLNKARD Sbjct: 686 DTIADAATMEKINETISKAKEEVKNLIVKAQNKDLEPEPGRTMMESFENKVNQVLNKARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPHF Sbjct: 746 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+ +++Y ID +WN Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFRYNIDDESWN 925 Query: 506 P-NYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVL 330 P +YMLPE +EDL+TI+E+R VF+AEVQKL+ADR+QLGTEIA TGD++WPLPVN+KRL+ Sbjct: 926 PTSYMLPEHIEDLRTIQELRDVFEAEVQKLDADRYQLGTEIAVTGDSNWPLPVNLKRLIW 985 Query: 329 NAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSA 150 NAQKTF+VDFRR SD+HP+EIV++VDKLQERLKVV G D LS+EAQKNATLFF+ILLRS Sbjct: 986 NAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVVPGTDPLSVEAQKNATLFFSILLRST 1045 Query: 149 LASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 LASKRVL+EYRLT+EAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1046 LASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1094 >ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform X2 [Setaria italica] Length = 1852 Score = 1900 bits (4923), Expect = 0.0 Identities = 927/1069 (86%), Positives = 1002/1069 (93%), Gaps = 1/1069 (0%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSV+ IEH+ET ERGKPK GGLSDPRLGTIDRK+KCETCMA MA+CPGHFGHLEL Sbjct: 26 DEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTIDRKIKCETCMAGMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGFIKTVLSI+RCVCFNCSKILA+ ++ KFKQA++IRNPKNRLK+I +ACKSK Sbjct: 86 AKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTKFKQALKIRNPKNRLKRIYDACKSKK 145 Query: 2846 KCEGGDEID-GHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPE 2670 C GGD++D QDT+EPVKK RGGCGAQQP +T+DGMK+VA++KA Q+PE Sbjct: 146 VCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNITVDGMKMVAEFKAPKKKTDDQDQLPE 204 Query: 2669 PVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDT 2490 PVERKQILSAE+VL++LKRI+DEDC LGLNPKFARPDWMILQVL PSVMMDT Sbjct: 205 PVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDT 264 Query: 2489 SSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRA 2310 SSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQLLQFH+ATYFDN+LPGQPRA Sbjct: 265 SSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRA 324 Query: 2309 TQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNL 2130 TQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+LGVPWSIALNL Sbjct: 325 TQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNL 384 Query: 2129 TYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYK 1950 TYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRY+KKSSDQHL+LGYK Sbjct: 385 TYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYVKKSSDQHLDLGYK 444 Query: 1949 VERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHV 1770 VERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHV Sbjct: 445 VERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHV 504 Query: 1769 PQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILM 1590 PQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT I+KDVFMNILM Sbjct: 505 PQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLIEKDVFMNILM 564 Query: 1589 WWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVR 1410 WW+DFDGK+PAP ILKP+P+WTGKQVFNLIIP+QINL+R+SAWH E E GFITPGDT VR Sbjct: 565 WWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQINLIRFSAWHSETETGFITPGDTMVR 624 Query: 1409 IEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGI 1230 IEKGELLSGTLCKK+LG+ SGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ FS+GI Sbjct: 625 IEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGI 684 Query: 1229 GDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKAR 1050 GDTIAD TM KI+ETI+KAKNEV ELI+ A E LEAEPGRTMMESFENRVNQVLNKAR Sbjct: 685 GDTIADAATMEKINETISKAKNEVKELIKQAHENHLEAEPGRTMMESFENRVNQVLNKAR 744 Query: 1049 DDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPH 870 DDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPH Sbjct: 745 DDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPH 804 Query: 869 FTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAME 690 FTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAME Sbjct: 805 FTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAME 864 Query: 689 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNW 510 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+K+ +F+++++YE+D NW Sbjct: 865 DIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENW 924 Query: 509 NPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVL 330 PNYMLPE V+DLKTIRE R+VF+AEVQKLEADRFQLGTEI TTGDNSWP+PVN+KRL+ Sbjct: 925 RPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRFQLGTEITTTGDNSWPMPVNLKRLIW 984 Query: 329 NAQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSA 150 NAQKTF++DFRRPSDMHPMEIVEA+DKLQERLKVV GDD +S+EAQKNATLFFNILLRS Sbjct: 985 NAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVVPGDDAMSIEAQKNATLFFNILLRST 1044 Query: 149 LASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1045 FASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093 >ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris] gi|561031277|gb|ESW29856.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris] Length = 1834 Score = 1897 bits (4915), Expect = 0.0 Identities = 926/1068 (86%), Positives = 1000/1068 (93%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTIDRK+KCETC A+MA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTIDRKLKCETCTASMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+KTVL+I+RCVCFNCSKILA+ + KFKQA+RIRNPKNRLKKIL+ACK+KS Sbjct: 86 AKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHKFKQALRIRNPKNRLKKILDACKNKS 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGDEID GQDT+EPVKKSRGGCGAQQPK+T++GMK++A+YKA Q+PEP Sbjct: 146 KCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITIEGMKIIAEYKAQRKKSDDQEQLPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ LSAE+VL +LKRI+DEDC+ LGLNPK+ARPDWMILQVL PSVMMDTS Sbjct: 206 VERKQTLSAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENLKRQERNG+PAHIISEFAQLLQFH+ATYFDN+LPG PRAT Sbjct: 266 SRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSD HLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI KDVFMN LMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFISKDVFMNTLMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGKVP PTILKP+PLWTGKQVFNLIIP+ INL+RYS+WH E E+G ITPGDT VRI Sbjct: 566 WEDFDGKVPTPTILKPEPLWTGKQVFNLIIPKPINLIRYSSWHSESERGSITPGDTMVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFS+GIG Sbjct: 626 EKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM I++TI+ AK +V +LIR AQEK+LEAEPGRTMM+SFENRVNQ LN+ARD Sbjct: 686 DTIADASTMETINQTISAAKEKVKQLIRDAQEKKLEAEPGRTMMDSFENRVNQTLNRARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 DAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF+DRTLPHF Sbjct: 746 DAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q L+SLK+K+ +F+ +++YE D NW Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKTEFDRVFRYEFDDENWK 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 P YML E VEDLKTIRE R+VF+AEVQKLEADR+QL TEIATTGD+S PLPVN+KRL+ N Sbjct: 926 PTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQLATEIATTGDSSLPLPVNLKRLIWN 985 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF+VDFRRPSDMHPMEIVEA+DKLQERL+VV G+D LS EAQKNATL FNILLRS Sbjct: 986 AQKTFKVDFRRPSDMHPMEIVEAIDKLQERLRVVPGEDLLSQEAQKNATLLFNILLRSTF 1045 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVL+EYRL+REAF+WVVGEIESRFLQSLVA+GEMIGCVAAQSIGE Sbjct: 1046 ASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 1093 >ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5 [Citrus sinensis] Length = 1963 Score = 1897 bits (4913), Expect = 0.0 Identities = 926/1068 (86%), Positives = 1002/1068 (93%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVV IEH ETTERGKPK GGLSDPRLGTIDRKMKCETC ANMA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ KFKQA++IRNPKNRLKKIL+ACK+K+ Sbjct: 86 AKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHKFKQALKIRNPKNRLKKILDACKNKT 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGDEID GQD EEP+KK++GGCGAQQPKLT++GMK++A+YKA Q+PEP Sbjct: 146 KCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTIEGMKMIAEYKAQRKKNDDQEQLPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+ARPDWMILQVL PSVMMDTS Sbjct: 206 VERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQFH+ATYFDN+LPGQPRAT Sbjct: 266 SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSD HLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI+KDVFMNILMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGKVP PTILKP+PLWTGKQVFNLIIP+QINL R +AWH + +KG +T GDT VRI Sbjct: 566 WEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADNDKGILTAGDTLVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFS+GIG Sbjct: 626 EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM I++TI+KAKN V LI+ AQ+K LE EPGRTMMESFEN+VNQVLN ARD Sbjct: 686 DTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESFENKVNQVLNTARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 +AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF Sbjct: 746 EAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+ +++E+D+ NWN Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDKAFRFEMDEENWN 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 PNYML E ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+SWPLPVN+KRL+ N Sbjct: 926 PNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSWPLPVNLKRLIWN 985 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF+VD RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKNATLFFNILLRS Sbjct: 986 AQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTF 1045 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVLKE+RLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1046 ASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093 >ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4 [Citrus sinensis] Length = 1853 Score = 1897 bits (4913), Expect = 0.0 Identities = 926/1068 (86%), Positives = 1002/1068 (93%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVV IEH ETTERGKPK GGLSDPRLGTIDRKMKCETC ANMA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ KFKQA++IRNPKNRLKKIL+ACK+K+ Sbjct: 86 AKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHKFKQALKIRNPKNRLKKILDACKNKT 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGDEID GQD EEP+KK++GGCGAQQPKLT++GMK++A+YKA Q+PEP Sbjct: 146 KCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTIEGMKMIAEYKAQRKKNDDQEQLPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+ARPDWMILQVL PSVMMDTS Sbjct: 206 VERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQFH+ATYFDN+LPGQPRAT Sbjct: 266 SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSD HLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI+KDVFMNILMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGKVP PTILKP+PLWTGKQVFNLIIP+QINL R +AWH + +KG +T GDT VRI Sbjct: 566 WEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADNDKGILTAGDTLVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFS+GIG Sbjct: 626 EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM I++TI+KAKN V LI+ AQ+K LE EPGRTMMESFEN+VNQVLN ARD Sbjct: 686 DTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESFENKVNQVLNTARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 +AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF Sbjct: 746 EAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+ +++E+D+ NWN Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDKAFRFEMDEENWN 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 PNYML E ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+SWPLPVN+KRL+ N Sbjct: 926 PNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSWPLPVNLKRLIWN 985 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF+VD RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKNATLFFNILLRS Sbjct: 986 AQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTF 1045 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVLKE+RLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1046 ASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093 >ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3 [Citrus sinensis] Length = 1790 Score = 1897 bits (4913), Expect = 0.0 Identities = 926/1068 (86%), Positives = 1002/1068 (93%) Frame = -3 Query: 3206 DEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMADCPGHFGHLEL 3027 DEIRQMSVV IEH ETTERGKPK GGLSDPRLGTIDRKMKCETC ANMA+CPGHFGHLEL Sbjct: 26 DEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLEL 85 Query: 3026 AKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPKFKQAMRIRNPKNRLKKILEACKSKS 2847 AKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ KFKQA++IRNPKNRLKKIL+ACK+K+ Sbjct: 86 AKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHKFKQALKIRNPKNRLKKILDACKNKT 145 Query: 2846 KCEGGDEIDGHGQDTEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXQMPEP 2667 KCEGGDEID GQD EEP+KK++GGCGAQQPKLT++GMK++A+YKA Q+PEP Sbjct: 146 KCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTIEGMKMIAEYKAQRKKNDDQEQLPEP 205 Query: 2666 VERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXPSVMMDTS 2487 VERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+ARPDWMILQVL PSVMMDTS Sbjct: 206 VERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 265 Query: 2486 SRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNDLPGQPRAT 2307 SRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQFH+ATYFDN+LPGQPRAT Sbjct: 266 SRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRAT 325 Query: 2306 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 2127 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT Sbjct: 326 QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLT 385 Query: 2126 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKV 1947 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSD HLELGYKV Sbjct: 386 YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 445 Query: 1946 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 1767 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP Sbjct: 446 ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 505 Query: 1766 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIDKDVFMNILMW 1587 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI+KDVFMNILMW Sbjct: 506 QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMW 565 Query: 1586 WEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGEKGFITPGDTQVRI 1407 WEDFDGKVP PTILKP+PLWTGKQVFNLIIP+QINL R +AWH + +KG +T GDT VRI Sbjct: 566 WEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADNDKGILTAGDTLVRI 625 Query: 1406 EKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIG 1227 EKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFS+GIG Sbjct: 626 EKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 685 Query: 1226 DTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARD 1047 DTIAD TM I++TI+KAKN V LI+ AQ+K LE EPGRTMMESFEN+VNQVLN ARD Sbjct: 686 DTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESFENKVNQVLNTARD 745 Query: 1046 DAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 867 +AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF Sbjct: 746 EAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHF 805 Query: 866 TKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 687 TKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED Sbjct: 806 TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 865 Query: 686 IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKRMDFNDMYKYEIDQPNWN 507 IMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ L+SLK+K+ +F+ +++E+D+ NWN Sbjct: 866 IMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDKAFRFEMDEENWN 925 Query: 506 PNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLN 327 PNYML E ++DLKTI+E+R VFDAEVQKLEADR+QL TEIAT+GD+SWPLPVN+KRL+ N Sbjct: 926 PNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSWPLPVNLKRLIWN 985 Query: 326 AQKTFRVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSLEAQKNATLFFNILLRSAL 147 AQKTF+VD RRPSDMHPME+VEAVDKLQERLKVV G+D LS+EAQKNATLFFNILLRS Sbjct: 986 AQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTF 1045 Query: 146 ASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAAGEMIGCVAAQSIGE 3 ASKRVLKE+RLTREAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE Sbjct: 1046 ASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093