BLASTX nr result
ID: Mentha24_contig00008675
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha24_contig00008675 (2252 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU40077.1| hypothetical protein MIMGU_mgv1a001651mg [Mimulus... 1289 0.0 ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi... 1263 0.0 ref|XP_007040301.1| Xeroderma pigmentosum complementation group ... 1258 0.0 ref|XP_007210350.1| hypothetical protein PRUPE_ppa001762mg [Prun... 1251 0.0 ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So... 1248 0.0 ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So... 1246 0.0 ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri... 1238 0.0 gb|EXB37318.1| DNA repair helicase [Morus notabilis] 1238 0.0 ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Popu... 1229 0.0 ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cu... 1229 0.0 ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Popu... 1225 0.0 gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabido... 1225 0.0 ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]... 1224 0.0 ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fr... 1219 0.0 ref|XP_006476522.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h... 1218 0.0 ref|XP_002299520.2| DNA repair protein and transcription factor ... 1217 0.0 ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp.... 1217 0.0 ref|XP_002870640.1| DNA repair and transcription factor XPB1 [Ar... 1216 0.0 ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutr... 1212 0.0 ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Ci... 1211 0.0 >gb|EYU40077.1| hypothetical protein MIMGU_mgv1a001651mg [Mimulus guttatus] Length = 778 Score = 1289 bits (3335), Expect = 0.0 Identities = 658/754 (87%), Positives = 681/754 (90%), Gaps = 12/754 (1%) Frame = -1 Query: 2228 MGNGDKNRPSKKIKFSKDEH-RASAAEDYS-SHFGENVDDDPRDGEGKKRDFSKLELKPD 2055 MGNGDK RPSKKIKFSK+E+ RAS ED + S FGE++D+D RDGEGKKRDF+KLELKPD Sbjct: 1 MGNGDKGRPSKKIKFSKEEYNRASVPEDNNESRFGEDMDED-RDGEGKKRDFTKLELKPD 59 Query: 2054 HMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 1875 H NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG Sbjct: 60 HANRPLWACADGRIFLETFSQLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 119 Query: 1874 LETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPE------- 1716 LETETIISVLNKLSKTKLP+EMIDFIH STANYGKVKLVLKKNKY VESPFPE Sbjct: 120 LETETIISVLNKLSKTKLPQEMIDFIHGSTANYGKVKLVLKKNKYLVESPFPEARYDDPI 179 Query: 1715 ---VLKTLLKDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXX 1545 VL LL DEVIGRAR S+G+ G++GF GKSA EI G H Sbjct: 180 CSWVLNRLLHDEVIGRARKLSDGNHGSEGFMKGKSAAEIGGAHDELLNEAELAAVAEEKE 239 Query: 1544 XXXXEIDPTQVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSL 1365 EIDP QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSL Sbjct: 240 THSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSL 299 Query: 1364 SKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTI 1185 SKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTI Sbjct: 300 SKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTI 359 Query: 1184 KEDQICRFTSDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEV 1005 KEDQICRFTSDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIE+IRNREWGLLLMDEV Sbjct: 360 KEDQICRFTSDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEIRNREWGLLLMDEV 419 Query: 1004 HVVPAQMFRKVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIA 825 HVVPA MFRKVI+LTKSHCKLGLTATLVRED+RITDLNFLIGPKLYEANWLDLV+GGFIA Sbjct: 420 HVVPAHMFRKVISLTKSHCKLGLTATLVREDDRITDLNFLIGPKLYEANWLDLVRGGFIA 479 Query: 824 NVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVF 645 NVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVF Sbjct: 480 NVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVF 539 Query: 644 ADNLFALTEYAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEAN 465 ADNLFALTEYAMKLRKPMIYGATSHPERTKILEAFKTS++VNT+FLSKVGDNSIDIPEAN Sbjct: 540 ADNLFALTEYAMKLRKPMIYGATSHPERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEAN 599 Query: 464 VIIQISSHAGSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTK 285 VIIQISSHAGSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTK Sbjct: 600 VIIQISSHAGSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTK 659 Query: 284 RQQFLIDQGYSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDAD 105 RQQFLIDQGYSFKVITSLPP D+G+ELSYHR +DQLALLGKVLSAGD+ VGLEQLEEDAD Sbjct: 660 RQQFLIDQGYSFKVITSLPPSDSGSELSYHRLEDQLALLGKVLSAGDDAVGLEQLEEDAD 719 Query: 104 DIALQKXXXXXXXXXXXXXANGRVYMEYSTGQKK 3 DIALQK ANG VYMEYSTGQKK Sbjct: 720 DIALQKARRSAGSMSAMSGANGMVYMEYSTGQKK 753 >ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera] Length = 771 Score = 1263 bits (3267), Expect = 0.0 Identities = 634/745 (85%), Positives = 674/745 (90%), Gaps = 3/745 (0%) Frame = -1 Query: 2228 MGNGDKNRPSKKIKFS-KDEHRASAAEDYSSHFGENVDDDPRDGE--GKKRDFSKLELKP 2058 MG+G+K RPSK+ K S KDEH+ ED +++GE +DD RDGE GKKRDF+KLELK Sbjct: 1 MGHGEKGRPSKRHKSSSKDEHKNPVVEDEDAYYGEEFEDDYRDGEKEGKKRDFTKLELKV 60 Query: 2057 DHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 1878 DH NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV Sbjct: 61 DHSNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 120 Query: 1877 GLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLL 1698 GLETETII+VL+KLSKTKLPKEMIDFIH STANYGKVKLVLKKN+YFVESPFPEVLKTLL Sbjct: 121 GLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLL 180 Query: 1697 KDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPT 1518 +DEVI R+RIS EGS G DGFT+ K+ GEIEG H E+DP Sbjct: 181 RDEVISRSRISHEGSTGNDGFTISKTVGEIEGRHDELINEAELAAAAEEKETHSFEVDPA 240 Query: 1517 QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRA 1338 QVENVKQRCLPNALNYPMLEEYDFRND VNPDL++ELKP AQPRPYQEKSLSKMFGNGRA Sbjct: 241 QVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRA 300 Query: 1337 RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFT 1158 RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTI+++QICRFT Sbjct: 301 RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFT 360 Query: 1157 SDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFR 978 SDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGLLLMDEVHVVPA MFR Sbjct: 361 SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFR 420 Query: 977 KVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 798 KVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC Sbjct: 421 KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 480 Query: 797 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 618 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE Sbjct: 481 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 540 Query: 617 YAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHA 438 YAMKLRKPMIYGATSH ERTKILEAFKT ++VNTIFLSKVGDNSIDIPEANVIIQISSHA Sbjct: 541 YAMKLRKPMIYGATSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQISSHA 600 Query: 437 GSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 258 GSRRQEAQRLGRILRAKG+ QDR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG Sbjct: 601 GSRRQEAQRLGRILRAKGRLQDRLAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 660 Query: 257 YSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXX 78 YSFK+ITSLPPPD+GA+LSYHR D+QLALLGKVLSAGD+ VGLEQL+EDADDIALQK Sbjct: 661 YSFKIITSLPPPDSGADLSYHRLDEQLALLGKVLSAGDDAVGLEQLDEDADDIALQKARR 720 Query: 77 XXXXXXXXXXANGRVYMEYSTGQKK 3 A+G VYMEY+TG+ K Sbjct: 721 SVGSMSAMSGASGMVYMEYNTGRNK 745 >ref|XP_007040301.1| Xeroderma pigmentosum complementation group B 1 isoform 1 [Theobroma cacao] gi|508777546|gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 isoform 1 [Theobroma cacao] Length = 771 Score = 1258 bits (3255), Expect = 0.0 Identities = 634/745 (85%), Positives = 673/745 (90%), Gaps = 3/745 (0%) Frame = -1 Query: 2228 MGNGDKNRPSKKIKFS-KDEHRASAAEDYSSHFGENVDDDPRDGE--GKKRDFSKLELKP 2058 MG+G+K RP+KK+KF+ KD+HR+S ED S + + DD RDGE GKKRDFSKLELKP Sbjct: 1 MGHGEKGRPTKKLKFAAKDDHRSSTVEDEYSFYPDEGDDASRDGENEGKKRDFSKLELKP 60 Query: 2057 DHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 1878 DH NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV Sbjct: 61 DHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 120 Query: 1877 GLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLL 1698 GLETETIISVLNKLSKTKLPKEMIDFIH STANYGKVKLVLKKN+YF+ESPFPEVLK LL Sbjct: 121 GLETETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKLL 180 Query: 1697 KDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPT 1518 +D+VI RARI+SE + G+DGFT+ K+AGEI H EIDP Sbjct: 181 QDDVIARARIASESAHGSDGFTISKAAGEIGTGHDGLLNEAELAAATEEKETHAFEIDPA 240 Query: 1517 QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRA 1338 QVENVKQRCLPNALNYPMLEEYDFRND VNPDL++ELKPHAQPRPYQEKSLSKMFGNGRA Sbjct: 241 QVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRA 300 Query: 1337 RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFT 1158 RSGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTI++DQICRFT Sbjct: 301 RSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFT 360 Query: 1157 SDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFR 978 SDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGLLLMDEVHVVPA MFR Sbjct: 361 SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFR 420 Query: 977 KVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 798 KVI+LTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC Sbjct: 421 KVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 480 Query: 797 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 618 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHE++RGDKIIVFADNLFALTE Sbjct: 481 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHERERGDKIIVFADNLFALTE 540 Query: 617 YAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHA 438 YAMKLRKPMIYGATSH ERTKIL+AFKTSR+VNTIFLSKVGDNSIDIPEANVIIQISSHA Sbjct: 541 YAMKLRKPMIYGATSHLERTKILQAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHA 600 Query: 437 GSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 258 GSRRQEAQRLGRILRAKGK +DR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG Sbjct: 601 GSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 660 Query: 257 YSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXX 78 YSFKVITSLPPPD GA+LSY+ D+QLALLGKVL+AGD+ VGLEQLEEDADDIAL K Sbjct: 661 YSFKVITSLPPPDAGADLSYYHLDEQLALLGKVLTAGDDAVGLEQLEEDADDIALHKARR 720 Query: 77 XXXXXXXXXXANGRVYMEYSTGQKK 3 ANG VYMEYSTG+ K Sbjct: 721 STGSMSAMSGANGMVYMEYSTGKHK 745 >ref|XP_007210350.1| hypothetical protein PRUPE_ppa001762mg [Prunus persica] gi|462406085|gb|EMJ11549.1| hypothetical protein PRUPE_ppa001762mg [Prunus persica] Length = 768 Score = 1251 bits (3237), Expect = 0.0 Identities = 635/745 (85%), Positives = 669/745 (89%), Gaps = 3/745 (0%) Frame = -1 Query: 2228 MGNGDKNRPSKKIKFSKDEHRASAAEDYSSHFG-ENVDDDPRDGEGKKRDFSKLELKPDH 2052 MG+GDK RPSKK+KFS E + +D ++FG E++D+D RDGEGKKRDF+KLELKPDH Sbjct: 1 MGHGDKGRPSKKLKFSAKE--ITHLDDEDAYFGGEDIDEDVRDGEGKKRDFTKLELKPDH 58 Query: 2051 MNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 1872 +NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL Sbjct: 59 INRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 118 Query: 1871 ETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPE--VLKTLL 1698 ETETIISVLNKLSKTKLPKEMIDFIH STANYGKVKLVLKKN+Y VESPFPE VLKTLL Sbjct: 119 ETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYLVESPFPEARVLKTLL 178 Query: 1697 KDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPT 1518 KDEVI ++RI SEGSRG+DGFT+ K+ GEI E+DPT Sbjct: 179 KDEVISKSRIISEGSRGSDGFTISKTMGEIGAGPSDLLNEAELAAAAEEKETHAFEVDPT 238 Query: 1517 QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRA 1338 QVENVK+RCLPNALNYPMLEEYDFRND VNPDL++ELKP AQPRPYQEKSLSKMFGNGRA Sbjct: 239 QVENVKERCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRA 298 Query: 1337 RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFT 1158 RSGIIVLPCGAGKSLVGVSAA RIRKSCLCLATNAVSVDQWAFQFKLWSTI+++QICRFT Sbjct: 299 RSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFT 358 Query: 1157 SDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFR 978 SDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGLLLMDEVHVVPAQMFR Sbjct: 359 SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAQMFR 418 Query: 977 KVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 798 KVI+LTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC Sbjct: 419 KVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 478 Query: 797 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 618 PMTKEFFA+YLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFAL E Sbjct: 479 PMTKEFFAQYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALVE 538 Query: 617 YAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHA 438 YAMKLRKPMIYGATSH ERTKILEAFKTSR+VNTIFLSKVGDNSIDIPEANVIIQISSHA Sbjct: 539 YAMKLRKPMIYGATSHVERTKILEAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHA 598 Query: 437 GSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 258 GSRRQEAQRLGRILRAKGK QDR+AGGKEEYNAFFYSLVS DTQEMYYSTKRQQFLIDQG Sbjct: 599 GSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSMDTQEMYYSTKRQQFLIDQG 658 Query: 257 YSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXX 78 YSFKVIT LPPPD+G EL+YH DDQLALL KVLSAGD VGLEQLEEDADDIAL K Sbjct: 659 YSFKVITGLPPPDSGPELNYHSLDDQLALLTKVLSAGDEAVGLEQLEEDADDIALHKARR 718 Query: 77 XXXXXXXXXXANGRVYMEYSTGQKK 3 ANG VYMEYSTG+ K Sbjct: 719 FGGSMSAMSGANGMVYMEYSTGRHK 743 >ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum] Length = 768 Score = 1248 bits (3228), Expect = 0.0 Identities = 631/745 (84%), Positives = 667/745 (89%), Gaps = 3/745 (0%) Frame = -1 Query: 2231 HMGNGDKNRPSKKIKF-SKDEHRASAAEDYSSHFGENVDDDPRDGE--GKKRDFSKLELK 2061 H G+GDK+RPSKKIKF SK+E+RAS A+D ++ E DD DGE GKK DF+KLELK Sbjct: 3 HHGHGDKSRPSKKIKFASKEEYRASTADD-DQYYPEEGGDDFHDGEREGKKMDFTKLELK 61 Query: 2060 PDHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 1881 PDH NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS Sbjct: 62 PDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 121 Query: 1880 VGLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTL 1701 VGLETETII+VL+KLSKTKLPKEMIDFIH STANYGKVKLVLKKN+YF+ESPFPEVLK L Sbjct: 122 VGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRL 181 Query: 1700 LKDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDP 1521 L D+ IG+ARISSEG G DGFTV K EIEG H EIDP Sbjct: 182 LADDAIGKARISSEGMHGKDGFTVSKPVNEIEGGHDELINEVDVAAAAEEKETHSFEIDP 241 Query: 1520 TQVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGR 1341 QVENVKQRCLPNALNYPM+EEYDFRND VNPDL++ELKP AQPRPYQEKSLSKMFGNGR Sbjct: 242 AQVENVKQRCLPNALNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGR 301 Query: 1340 ARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRF 1161 ARSGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTI+E+QICRF Sbjct: 302 ARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRF 361 Query: 1160 TSDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMF 981 TSDSKERFRGN GVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGLLLMDEVHVVPA MF Sbjct: 362 TSDSKERFRGNVGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMF 421 Query: 980 RKVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVW 801 RKVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVW Sbjct: 422 RKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVW 481 Query: 800 CPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALT 621 CPMTKEFFAEYLKKENSKK+QALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFAL Sbjct: 482 CPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALV 541 Query: 620 EYAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSH 441 EYAMKLRKPMIYGATSH ERTKILEAFKTS+EVNTIFLSKVGDNSIDIPEANVIIQISSH Sbjct: 542 EYAMKLRKPMIYGATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDIPEANVIIQISSH 601 Query: 440 AGSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQ 261 AGSRRQEAQRLGRILRAKGK QDR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQ Sbjct: 602 AGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQ 661 Query: 260 GYSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXX 81 GYSFKVITSLPP D+G+ELSYHR DDQL LLGKVLSAGD+ VGLEQL+EDADD+ALQK Sbjct: 662 GYSFKVITSLPPSDSGSELSYHRLDDQLQLLGKVLSAGDDAVGLEQLDEDADDVALQKAR 721 Query: 80 XXXXXXXXXXXANGRVYMEYSTGQK 6 A G VYMEY+TG++ Sbjct: 722 RYMGSMSAMSGAKGMVYMEYNTGKR 746 >ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum] Length = 768 Score = 1246 bits (3225), Expect = 0.0 Identities = 631/745 (84%), Positives = 668/745 (89%), Gaps = 3/745 (0%) Frame = -1 Query: 2231 HMGNGDKNRPSKKIKF-SKDEHRASAAEDYSSHFGENVDDDPRDGE--GKKRDFSKLELK 2061 H G+GDK+RPSKKIKF SK+E+RAS A+D ++ E DD DGE GKK DF+KLELK Sbjct: 3 HHGHGDKSRPSKKIKFASKEEYRASTADD-DHYYPEEGGDDFHDGEREGKKMDFTKLELK 61 Query: 2060 PDHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 1881 PDH NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS Sbjct: 62 PDHGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 121 Query: 1880 VGLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTL 1701 VGLETETII+VL+KLSKTKLPKEMIDFIH STANYGKVKLVLKKN+YF+ESPFPEVLK L Sbjct: 122 VGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRL 181 Query: 1700 LKDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDP 1521 L D+ IG+ARISSEG G DGFTV K EIEG H EIDP Sbjct: 182 LADDAIGKARISSEGMHGKDGFTVSKPVNEIEGGHDELINEVDVAAAAEEKETHSFEIDP 241 Query: 1520 TQVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGR 1341 QVENVKQRCLPNALNYPM+EEYDFRND VNPDL++ELKP AQPRPYQEKSLSKMFGNGR Sbjct: 242 AQVENVKQRCLPNALNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGR 301 Query: 1340 ARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRF 1161 ARSGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTI+E+QICRF Sbjct: 302 ARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRF 361 Query: 1160 TSDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMF 981 TSDSKERFRGN GVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGLLLMDEVHVVPA MF Sbjct: 362 TSDSKERFRGNVGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMF 421 Query: 980 RKVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVW 801 RKVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVW Sbjct: 422 RKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVW 481 Query: 800 CPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALT 621 CPMTKEFFAEYLKKENSKK+QALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALT Sbjct: 482 CPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALT 541 Query: 620 EYAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSH 441 EYAMKLRKPMIYGATSH ERTKILEAFKTS+EVNTIFLSKVGDNSIDIPEANVIIQISSH Sbjct: 542 EYAMKLRKPMIYGATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDIPEANVIIQISSH 601 Query: 440 AGSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQ 261 AGSRRQEAQRLGRILRAKGK QDR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQ Sbjct: 602 AGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQ 661 Query: 260 GYSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXX 81 GYSFKVITSLPP D+G+ELSYHR D+QL LLGKVLSAGD+ VGLEQL+EDADD+ALQK Sbjct: 662 GYSFKVITSLPPSDSGSELSYHRLDEQLQLLGKVLSAGDDAVGLEQLDEDADDVALQKAR 721 Query: 80 XXXXXXXXXXXANGRVYMEYSTGQK 6 A G VYMEY++G+K Sbjct: 722 RYVGSMSAMSGAKGMVYMEYNSGKK 746 >ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis] gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis] Length = 768 Score = 1238 bits (3204), Expect = 0.0 Identities = 625/743 (84%), Positives = 665/743 (89%), Gaps = 1/743 (0%) Frame = -1 Query: 2228 MGNGDKNRPSKKIKFSKDEHRASAAEDYSSHFGENVDDD-PRDGEGKKRDFSKLELKPDH 2052 MG+G+K RPSKK K S D+HR++ ED + GE+++DD P DGEGKK+DFSKLELK DH Sbjct: 1 MGHGEKGRPSKKQKSSNDDHRSTIMEDEDVYCGEDMEDDRPDDGEGKKKDFSKLELKLDH 60 Query: 2051 MNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 1872 NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL Sbjct: 61 ANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGL 120 Query: 1871 ETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLLKD 1692 ETETIISVLNKLSKTKLPKEMIDFIH STANYGKVKLVLKKN+Y VESPFPEVLK LLKD Sbjct: 121 ETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYLVESPFPEVLKRLLKD 180 Query: 1691 EVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPTQV 1512 EVI RAR+ SE FT+ K+AGEI +H E+DP+QV Sbjct: 181 EVISRARLVSEAHVNGS-FTISKTAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQV 239 Query: 1511 ENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRARS 1332 ENVKQRCLPNALNYPMLEEYDFRND VNPDL++ELKPHAQPRPYQEKSLSKMFGNGRARS Sbjct: 240 ENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARS 299 Query: 1331 GIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFTSD 1152 GIIVLPCGAGKSLVGVSAACRI+KSCLCLATNAVSVDQWAFQF+LWSTI+E+QICRFTSD Sbjct: 300 GIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFQLWSTIREEQICRFTSD 359 Query: 1151 SKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFRKV 972 SKERF+GNAGVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGLLLMDEVHVVPA MFRKV Sbjct: 360 SKERFQGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV 419 Query: 971 IALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPM 792 I+LTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPM Sbjct: 420 ISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPM 479 Query: 791 TKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA 612 TKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA Sbjct: 480 TKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA 539 Query: 611 MKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHAGS 432 MKLRKPMIYGATSH ERTKIL+AFKTS++VNT+FLSKVGDNSIDIPEANVIIQISSHAGS Sbjct: 540 MKLRKPMIYGATSHAERTKILQAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGS 599 Query: 431 RRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS 252 RRQEAQRLGRILRAKGK QDR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS Sbjct: 600 RRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYS 659 Query: 251 FKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXXXX 72 FKVITSLPP D+G +LSY+ D+QLALL KVL+AGD+ VGLEQLEEDADDIAL K Sbjct: 660 FKVITSLPPLDSGPDLSYYHLDEQLALLAKVLNAGDDAVGLEQLEEDADDIALHKARRSM 719 Query: 71 XXXXXXXXANGRVYMEYSTGQKK 3 A G VYMEYSTG+ K Sbjct: 720 GSMSAMSGAKGMVYMEYSTGRNK 742 >gb|EXB37318.1| DNA repair helicase [Morus notabilis] Length = 787 Score = 1238 bits (3202), Expect = 0.0 Identities = 638/764 (83%), Positives = 668/764 (87%), Gaps = 22/764 (2%) Frame = -1 Query: 2228 MGNGD-KNRPSKKIKFS-KDEHRASAAEDYSSHFGENVDDDPRDGEGKKRDFSKLELKPD 2055 MG+GD K RPSKK K S K+E + ED ++FG+ +DDD R GEGKKRDFSKLELKPD Sbjct: 1 MGHGDHKGRPSKKHKSSAKEEQKNPFFEDEDAYFGDEIDDDFRYGEGKKRDFSKLELKPD 60 Query: 2054 HMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 1875 H NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG Sbjct: 61 HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120 Query: 1874 LETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPE-----VL 1710 LETETIISVLNKLSKTKLPKEMIDFIH STANYGKVKLVLKKN+YF+ESPFPE VL Sbjct: 121 LETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYFIESPFPEARFCSVL 180 Query: 1709 KTLLKDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXE 1530 K LLKDEVI RARI+SEGS G DGFT+ K+ GE+ E Sbjct: 181 KRLLKDEVISRARITSEGSHGNDGFTISKTMGEMGNGPDSLLNEAELAAAAEEKETHSFE 240 Query: 1529 IDPTQ---------------VENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHA 1395 IDP+Q VENVKQRCLPNALNYPMLEEYDFRND VNPDL++ELKP A Sbjct: 241 IDPSQALSQKVRNRTSSCQQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQA 300 Query: 1394 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQW 1215 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQW Sbjct: 301 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQW 360 Query: 1214 AFQFKLWSTIKEDQICRFTSDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNR 1035 AFQFKLWSTI++DQICRFTSDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIE+IRNR Sbjct: 361 AFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNR 420 Query: 1034 EWGLLLMDEVHVVPAQMFRKVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANW 855 EWGLLLMDEVHVVPA MFRKVI+LTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANW Sbjct: 421 EWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANW 480 Query: 854 LDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHE 675 LDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHE Sbjct: 481 LDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHE 540 Query: 674 QQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVG 495 QQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSH ERTKILEAFKTSR+VNTIFLSKVG Sbjct: 541 QQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILEAFKTSRDVNTIFLSKVG 600 Query: 494 DNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVST 315 DNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGK QDR+AGGKEEYNAFFYSLVST Sbjct: 601 DNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVST 660 Query: 314 DTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEV 135 DTQEMYYSTKRQQFLIDQGYSFKVITSLPPPD+ AELSYHR ++QL LL KVLSAGD+ V Sbjct: 661 DTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDSEAELSYHRLEEQLILLSKVLSAGDDAV 720 Query: 134 GLEQLEEDADDIALQKXXXXXXXXXXXXXANGRVYMEYSTGQKK 3 GLEQLEEDADDIAL K ANG VYMEYSTG+ K Sbjct: 721 GLEQLEEDADDIALHKARRSLGSMSAMSGANGMVYMEYSTGKGK 764 >ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa] gi|550346909|gb|ERP65333.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa] Length = 783 Score = 1229 bits (3180), Expect = 0.0 Identities = 629/759 (82%), Positives = 664/759 (87%), Gaps = 18/759 (2%) Frame = -1 Query: 2228 MGNGDKN-RPSKKIKFS-KDEHRASAAEDYSSHFGENVDDDPRDGE--GKKRDFSKLELK 2061 MG+GDK+ RP+KK KF+ KD++R+S AED + + E DD RDGE GKKRDFSKLELK Sbjct: 1 MGHGDKSGRPNKKFKFTTKDDYRSSVAED-DAFYPEEAGDDFRDGETEGKKRDFSKLELK 59 Query: 2060 PDHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 1881 PDH NRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS Sbjct: 60 PDHANRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 119 Query: 1880 VGLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPE----- 1716 VGLETETIISVLNKLSKTKLPKEMIDFIH STANYGKVKLVLKKN+YF+ESPF E Sbjct: 120 VGLETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYFIESPFTEASWFF 179 Query: 1715 ---------VLKTLLKDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXX 1563 VLK LLKDEVI +ARI E S G +GFT+ K+AGEI +H Sbjct: 180 VSGFPPLSLVLKKLLKDEVIAKARIQPESSHGTEGFTISKAAGEIGTSHDGLLNEAELAA 239 Query: 1562 XXXXXXXXXXEIDPTQVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRP 1383 E+DP+QVENVKQRCLPNALNYPMLEEYDFRND VNPDL +ELKPHAQPRP Sbjct: 240 AAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLNMELKPHAQPRP 299 Query: 1382 YQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQF 1203 YQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI+KSCLCLATNAVSVDQWAFQF Sbjct: 300 YQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQF 359 Query: 1202 KLWSTIKEDQICRFTSDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGL 1023 LWS I +DQICRFTSDSKERF+GNAGVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGL Sbjct: 360 SLWSDISQDQICRFTSDSKERFKGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGL 419 Query: 1022 LLMDEVHVVPAQMFRKVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLV 843 LLMDEVHVVPA MFRKVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLV Sbjct: 420 LLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLV 479 Query: 842 KGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRG 663 KGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHE+QR Sbjct: 480 KGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEEQRR 539 Query: 662 DKIIVFADNLFALTEYAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSI 483 DKIIVFADNLFALTEYAMKL KPMIYGATSH ERTKIL AFKTS EVNT+FLSKVGDNSI Sbjct: 540 DKIIVFADNLFALTEYAMKLHKPMIYGATSHAERTKILHAFKTSSEVNTVFLSKVGDNSI 599 Query: 482 DIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQE 303 DIPEANVIIQISSHAGSRRQEAQRLGRILRAKGK QDR+AGGKEEYNAFFYSLVSTDTQE Sbjct: 600 DIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQE 659 Query: 302 MYYSTKRQQFLIDQGYSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQ 123 MYYSTKRQQFLIDQGYSFKVITSLPP D+GA+LSY+ DDQL LL KVLSAGD+ VGLEQ Sbjct: 660 MYYSTKRQQFLIDQGYSFKVITSLPPADSGADLSYNSLDDQLGLLAKVLSAGDDAVGLEQ 719 Query: 122 LEEDADDIALQKXXXXXXXXXXXXXANGRVYMEYSTGQK 6 L+EDADDIAL K ANG VYMEYSTGQK Sbjct: 720 LDEDADDIALHKARRYMGSMSAMSGANGMVYMEYSTGQK 758 >ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cucumis sativus] Length = 768 Score = 1229 bits (3179), Expect = 0.0 Identities = 625/743 (84%), Positives = 660/743 (88%), Gaps = 2/743 (0%) Frame = -1 Query: 2228 MGNGDKNRPSKKIKFSKDEHRASAAEDYSSHFGENVDDDPR--DGEGKKRDFSKLELKPD 2055 MG+GDK RP+KK KF K++++ + ED + ++ DDD R D EG KRDFSKLELKPD Sbjct: 1 MGHGDKGRPNKKPKFGKEDYKKANFEDDDVYHLDDPDDDDRYGDKEGGKRDFSKLELKPD 60 Query: 2054 HMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 1875 H NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG Sbjct: 61 HANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 120 Query: 1874 LETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLLK 1695 LETETII+VL+KLSK KLPKEMIDFI+ ST NYGKVKLVLKKN+Y VESPFPEVL+ LLK Sbjct: 121 LETETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVESPFPEVLQKLLK 180 Query: 1694 DEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPTQ 1515 DEVIGRAR+ E S G FTV K+AGE+ H EIDP+Q Sbjct: 181 DEVIGRARVVHEDS-GNGEFTVSKTAGELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQ 239 Query: 1514 VENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRAR 1335 VENVKQRCLPNALNYPMLEEYDFRND +NPDL++ELKP AQPRPYQEKSLSKMFGNGRAR Sbjct: 240 VENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEKSLSKMFGNGRAR 299 Query: 1334 SGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFTS 1155 SGIIVLPCGAGKSLVGVSAA RIRKSCLCLATNAVSVDQWAFQFKLWSTI++DQICRFTS Sbjct: 300 SGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTS 359 Query: 1154 DSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFRK 975 DSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGLLLMDEVHVVPA MFRK Sbjct: 360 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 419 Query: 974 VIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 795 VI+LTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP Sbjct: 420 VISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 479 Query: 794 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 615 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY Sbjct: 480 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 539 Query: 614 AMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHAG 435 AMKLRKPMIYGATSH ERTKILEAFKTSR+VNT+FLSKVGDNSIDIPEANVIIQISSHAG Sbjct: 540 AMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 599 Query: 434 SRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 255 SRRQEAQRLGRILRAKGK QDR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY Sbjct: 600 SRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 659 Query: 254 SFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXXX 75 SFKVITSLPP D GAELSYHR DDQLALLGKVL+AGD+ VGLEQLE+DAD IAL Sbjct: 660 SFKVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDDADQIALDAARRS 719 Query: 74 XXXXXXXXXANGRVYMEYSTGQK 6 ANG VYMEYSTG+K Sbjct: 720 KGSMSAMSGANGMVYMEYSTGRK 742 >ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa] gi|550346907|gb|ERP65332.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa] Length = 786 Score = 1225 bits (3169), Expect = 0.0 Identities = 628/763 (82%), Positives = 663/763 (86%), Gaps = 22/763 (2%) Frame = -1 Query: 2228 MGNGDKN-RPSKKIKFS-KDEHRASAAEDYSSHFGENVDDDPRDGEGKKRDFSKLELKPD 2055 MG+GDK+ RP+KK KF+ KD++R+S AED + + E DD RD EGKKRDFSKLELKPD Sbjct: 1 MGHGDKSGRPNKKFKFTTKDDYRSSVAED-DAFYPEEAGDDFRD-EGKKRDFSKLELKPD 58 Query: 2054 HMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 1875 H NRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG Sbjct: 59 HANRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 118 Query: 1874 LETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLLK 1695 LETETIISVLNKLSKTKLPKEMIDFIH STANYGKVKLVLKKN+YF+ESPF EVLK LLK Sbjct: 119 LETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYFIESPFTEVLKKLLK 178 Query: 1694 DEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPTQ 1515 DEVI +ARI E S G +GFT+ K+AGEI +H E+DP+Q Sbjct: 179 DEVIAKARIQPESSHGTEGFTISKAAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQ 238 Query: 1514 VENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRAR 1335 VENVKQRCLPNALNYPMLEEYDFRND VNPDL +ELKPHAQPRPYQEKSLSKMFGNGRAR Sbjct: 239 VENVKQRCLPNALNYPMLEEYDFRNDTVNPDLNMELKPHAQPRPYQEKSLSKMFGNGRAR 298 Query: 1334 SGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFTS 1155 SGIIVLPCGAGKSLVGVSAACRI+KSCLCLATNAVSVDQWAFQF LWS I +DQICRFTS Sbjct: 299 SGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFSLWSDISQDQICRFTS 358 Query: 1154 DSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFRK 975 DSKERF+GNAGVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGLLLMDEVHVVPA MFRK Sbjct: 359 DSKERFKGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK 418 Query: 974 VIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 795 VI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP Sbjct: 419 VISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 478 Query: 794 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 615 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHE+QR DKIIVFADNLFALTEY Sbjct: 479 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEEQRRDKIIVFADNLFALTEY 538 Query: 614 AMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHAG 435 AMKL KPMIYGATSH ERTKIL AFKTS EVNT+FLSKVGDNSIDIPEANVIIQISSHAG Sbjct: 539 AMKLHKPMIYGATSHAERTKILHAFKTSSEVNTVFLSKVGDNSIDIPEANVIIQISSHAG 598 Query: 434 SRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQ----------------- 306 SRRQEAQRLGRILRAKGK QDR+AGGKEEYNAFFYSLVSTDTQ Sbjct: 599 SRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQMIDADSSWRSISYLRCF 658 Query: 305 ---EMYYSTKRQQFLIDQGYSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEV 135 EMYYSTKRQQFLIDQGYSFKVITSLPP D+GA+LSY+ DDQL LL KVLSAGD+ V Sbjct: 659 FFLEMYYSTKRQQFLIDQGYSFKVITSLPPADSGADLSYNSLDDQLGLLAKVLSAGDDAV 718 Query: 134 GLEQLEEDADDIALQKXXXXXXXXXXXXXANGRVYMEYSTGQK 6 GLEQL+EDADDIAL K ANG VYMEYSTGQK Sbjct: 719 GLEQLDEDADDIALHKARRYMGSMSAMSGANGMVYMEYSTGQK 761 >gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabidopsis thaliana] Length = 767 Score = 1225 bits (3169), Expect = 0.0 Identities = 613/745 (82%), Positives = 665/745 (89%), Gaps = 3/745 (0%) Frame = -1 Query: 2228 MGNGDKNRPSKKIKFS-KDEHRASAAEDYSSHFGENVDDDPRDGEG--KKRDFSKLELKP 2058 MGNG++ RP+KK+K+ KD+ + ++ ++ ++ D+D RDGEG KKRDF+KLELKP Sbjct: 1 MGNGERGRPNKKMKYGGKDDQKMKNIQNAEDYY-DDADEDSRDGEGEEKKRDFTKLELKP 59 Query: 2057 DHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 1878 DH NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV Sbjct: 60 DHGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 119 Query: 1877 GLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLL 1698 GLETETIISVLNKLSKTKLPKEMI+FIH STANYGKVKLVLKKN+YF+ESPFPEVLK LL Sbjct: 120 GLETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLL 179 Query: 1697 KDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPT 1518 D+VI RAR SSE G DGF+VG+++GE+E EIDP Sbjct: 180 SDDVINRARFSSEPYYGGDGFSVGRTSGELEAGPGELLNEAEFAAAAEEKETHSFEIDPA 239 Query: 1517 QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRA 1338 QVENVKQRCLPNALNYPMLEEYDFRND VNPDL++ELKPHAQPRPYQEKSLSKMFGNGRA Sbjct: 240 QVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRA 299 Query: 1337 RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFT 1158 RSGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTI++DQICRFT Sbjct: 300 RSGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFT 359 Query: 1157 SDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFR 978 SDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIE++RNREWGLLLMDEVHVVPA MFR Sbjct: 360 SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFR 419 Query: 977 KVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 798 KVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC Sbjct: 420 KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 479 Query: 797 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 618 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE Sbjct: 480 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 539 Query: 617 YAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHA 438 YAMKLRKPMIYGATSH ERTKILEAFKTS++VNT+FLSKVGDNSIDIPEANVIIQISSHA Sbjct: 540 YAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHA 599 Query: 437 GSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 258 GSRRQEAQRLGRILRAKGK +DR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG Sbjct: 600 GSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 659 Query: 257 YSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXX 78 YSFKVITSLPPPD G+ LSYH ++QL+LLGKV++AGD+ VGLEQLEED D +ALQK Sbjct: 660 YSFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVMNAGDDLVGLEQLEEDTDGMALQKARR 719 Query: 77 XXXXXXXXXXANGRVYMEYSTGQKK 3 + G VYMEY++G+ K Sbjct: 720 SMGSMSVMSGSKGMVYMEYNSGRHK 744 >ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana] gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA repair helicase XPB1; AltName: Full=ERCC3 homolog 1; AltName: Full=Protein araXPB; AltName: Full=RAD25 homolog 1; Short=AtXPB1; AltName: Full=XPB homolog 1 gi|11771735|gb|AAC49987.2| putative DNA repair protein and transcription factor [Arabidopsis thaliana] gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis thaliana] gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8 [Arabidopsis thaliana] gi|332007287|gb|AED94670.1| DNA repair helicase XPB1 [Arabidopsis thaliana] Length = 767 Score = 1224 bits (3168), Expect = 0.0 Identities = 613/745 (82%), Positives = 664/745 (89%), Gaps = 3/745 (0%) Frame = -1 Query: 2228 MGNGDKNRPSKKIKFS-KDEHRASAAEDYSSHFGENVDDDPRDGEG--KKRDFSKLELKP 2058 MGNG++ RP+KK+K+ KD+ + ++ ++ ++ D+D RDGEG KKRDF+KLELKP Sbjct: 1 MGNGERGRPNKKMKYGGKDDQKMKNIQNAEDYY-DDADEDSRDGEGEEKKRDFTKLELKP 59 Query: 2057 DHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 1878 DH NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV Sbjct: 60 DHGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 119 Query: 1877 GLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLL 1698 GLETETIISVLNKLSKTKLPKEMI+FIH STANYGKVKLVLKKN+YF+ESPFPEVLK LL Sbjct: 120 GLETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLL 179 Query: 1697 KDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPT 1518 D+VI RAR SSE G DGF+VG++ GE+E EIDP Sbjct: 180 SDDVINRARFSSEPYYGGDGFSVGRTCGELEAGPGELLNEAEFAAAAEEKETHSFEIDPA 239 Query: 1517 QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRA 1338 QVENVKQRCLPNALNYPMLEEYDFRND VNPDL++ELKPHAQPRPYQEKSLSKMFGNGRA Sbjct: 240 QVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRA 299 Query: 1337 RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFT 1158 RSGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTI++DQICRFT Sbjct: 300 RSGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFT 359 Query: 1157 SDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFR 978 SDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIE++RNREWGLLLMDEVHVVPA MFR Sbjct: 360 SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFR 419 Query: 977 KVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 798 KVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC Sbjct: 420 KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 479 Query: 797 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 618 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE Sbjct: 480 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 539 Query: 617 YAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHA 438 YAMKLRKPMIYGATSH ERTKILEAFKTS++VNT+FLSKVGDNSIDIPEANVIIQISSHA Sbjct: 540 YAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHA 599 Query: 437 GSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 258 GSRRQEAQRLGRILRAKGK +DR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG Sbjct: 600 GSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 659 Query: 257 YSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXX 78 YSFKVITSLPPPD G+ LSYH ++QL+LLGKV++AGD+ VGLEQLEED D +ALQK Sbjct: 660 YSFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVMNAGDDLVGLEQLEEDTDGMALQKARR 719 Query: 77 XXXXXXXXXXANGRVYMEYSTGQKK 3 + G VYMEY++G+ K Sbjct: 720 SMGSMSVMSGSKGMVYMEYNSGRHK 744 >ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fragaria vesca subsp. vesca] Length = 768 Score = 1219 bits (3153), Expect = 0.0 Identities = 619/745 (83%), Positives = 665/745 (89%), Gaps = 3/745 (0%) Frame = -1 Query: 2228 MGNGDKN-RPSKKIKFSKDEHRASAAEDYSSHFG-ENVDDDPR-DGEGKKRDFSKLELKP 2058 MG+G+K+ RPSKK K S E A ED+ ++ G E +DDD R DGE KKRDF+KLELKP Sbjct: 1 MGHGEKSHRPSKKHKSSAKE--AIPVEDFEAYVGGEELDDDVRGDGEVKKRDFTKLELKP 58 Query: 2057 DHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 1878 DH+NRPLWACADGRIFLETFS+LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV Sbjct: 59 DHLNRPLWACADGRIFLETFSALYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 118 Query: 1877 GLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLL 1698 GLET+TIISVL+KLSKTKLPKEMIDFIH STANYGKVKLVLKKN+Y+VESPFPEVLK LL Sbjct: 119 GLETQTIISVLDKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYYVESPFPEVLKKLL 178 Query: 1697 KDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPT 1518 +D+VI +ARI SE + GFT+ K+ GEI EIDP+ Sbjct: 179 RDDVISKARIVSEAANEKGGFTISKTLGEIAADSSGLLNEAELAAAAEEKETHAFEIDPS 238 Query: 1517 QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRA 1338 QVE VK+RCLPNALNYPMLEEYDFRND VNPDL++ELKP AQPRPYQEKSLSKMFGNGRA Sbjct: 239 QVEKVKERCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRA 298 Query: 1337 RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFT 1158 RSGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTI+++ ICRFT Sbjct: 299 RSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDEHICRFT 358 Query: 1157 SDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFR 978 SDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGLLLMDEVHVVPAQMFR Sbjct: 359 SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAQMFR 418 Query: 977 KVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 798 KVIA+TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC Sbjct: 419 KVIAITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 478 Query: 797 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 618 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE Sbjct: 479 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 538 Query: 617 YAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHA 438 YAMKLRKPMIYGATSH ERTKILEAFKTS++VNT+FLSKVGDNSIDIPEANVIIQISSHA Sbjct: 539 YAMKLRKPMIYGATSHVERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHA 598 Query: 437 GSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 258 GSRRQEAQRLGRILRAKGK +DR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG Sbjct: 599 GSRRQEAQRLGRILRAKGKLRDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 658 Query: 257 YSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXX 78 YSFKVITSLPPPD+GA+LSYHR D+QL LL KVL+AGD+ VGLEQL+ED DDIAL K Sbjct: 659 YSFKVITSLPPPDSGADLSYHRLDEQLQLLSKVLTAGDDAVGLEQLDEDIDDIALLKSRR 718 Query: 77 XXXXXXXXXXANGRVYMEYSTGQKK 3 A+GRVYMEYSTG+ + Sbjct: 719 FSGSMSAMSGADGRVYMEYSTGKNR 743 >ref|XP_006476522.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase XPB1-like [Citrus sinensis] Length = 778 Score = 1218 bits (3152), Expect = 0.0 Identities = 621/745 (83%), Positives = 656/745 (88%), Gaps = 6/745 (0%) Frame = -1 Query: 2219 GDKNRPSKKIKFS-KDEHRASAAEDYSSHFGENVDDDPRDGEG--KKRDFSKLELKPDHM 2049 GDK RPSKK KFS KD+H + +D +++ E+ +DD RDGE +KRDFSKLELKPDH Sbjct: 10 GDKGRPSKKPKFSNKDDHSSKFVDDDDAYYNEDAEDDYRDGEKEERKRDFSKLELKPDHA 69 Query: 2048 NRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLE 1869 NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLE Sbjct: 70 NRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLE 129 Query: 1868 TETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLLKDE 1689 TETIISVLNKLSKTKLPKEMIDFIH STANYGKVKLVLKKN+Y VESPFP T + Sbjct: 130 TETIISVLNKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYLVESPFPXDFDTYRIEG 189 Query: 1688 VIG---RARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPT 1518 + R + G+DGFTV K+AGEI H EIDP+ Sbjct: 190 FLFXLCRYVYPVQNLHGSDGFTVSKAAGEIATGHDGLLNEAELAAAAEEKETHSFEIDPS 249 Query: 1517 QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRA 1338 QVENVKQRCLPNALNYPMLEEYDFRND VNPDL +ELKPHAQPRPYQEKSLSKMFGNGRA Sbjct: 250 QVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLNMELKPHAQPRPYQEKSLSKMFGNGRA 309 Query: 1337 RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFT 1158 RSGIIVLPCGAGKSLVGVSAACRI+KSCLCLATNAVSVDQWAFQFKLWSTI++DQICRFT Sbjct: 310 RSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFT 369 Query: 1157 SDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFR 978 SDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGLLLMDEVHVVPA MFR Sbjct: 370 SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFR 429 Query: 977 KVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 798 KVI+LTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC Sbjct: 430 KVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 489 Query: 797 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 618 PMTKEFF+EYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE Sbjct: 490 PMTKEFFSEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 549 Query: 617 YAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHA 438 YAMKLRKPMIYGATSH ERTKIL+AFK SR+VNTIFLSKVGDNSIDIPEANVIIQISSHA Sbjct: 550 YAMKLRKPMIYGATSHVERTKILQAFKCSRDVNTIFLSKVGDNSIDIPEANVIIQISSHA 609 Query: 437 GSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 258 GSRRQEAQRLGRILRAKGK +DR+AGGKEEYNAFFYSLVSTDTQEM+YSTKRQQFLIDQG Sbjct: 610 GSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMFYSTKRQQFLIDQG 669 Query: 257 YSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXX 78 YSFKVITSLPPPD+GA+LSYHR D+QLALLGKVLSAGD+ VGLEQL+EDADDIAL K Sbjct: 670 YSFKVITSLPPPDSGADLSYHRLDEQLALLGKVLSAGDDAVGLEQLDEDADDIALHKARR 729 Query: 77 XXXXXXXXXXANGRVYMEYSTGQKK 3 A G VYMEYSTGQKK Sbjct: 730 MAGSMSAMSGAQGMVYMEYSTGQKK 754 >ref|XP_002299520.2| DNA repair protein and transcription factor [Populus trichocarpa] gi|550346908|gb|EEE84325.2| DNA repair protein and transcription factor [Populus trichocarpa] Length = 803 Score = 1217 bits (3149), Expect = 0.0 Identities = 629/779 (80%), Positives = 664/779 (85%), Gaps = 38/779 (4%) Frame = -1 Query: 2228 MGNGDKN-RPSKKIKFS-KDEHRASAAEDYSSHFGENVDDDPRDGE--GKKRDFSKLELK 2061 MG+GDK+ RP+KK KF+ KD++R+S AED + + E DD RDGE GKKRDFSKLELK Sbjct: 1 MGHGDKSGRPNKKFKFTTKDDYRSSVAED-DAFYPEEAGDDFRDGETEGKKRDFSKLELK 59 Query: 2060 PDHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 1881 PDH NRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS Sbjct: 60 PDHANRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS 119 Query: 1880 VGLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPE----- 1716 VGLETETIISVLNKLSKTKLPKEMIDFIH STANYGKVKLVLKKN+YF+ESPF E Sbjct: 120 VGLETETIISVLNKLSKTKLPKEMIDFIHGSTANYGKVKLVLKKNRYFIESPFTEASWFF 179 Query: 1715 ---------VLKTLLKDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXX 1563 VLK LLKDEVI +ARI E S G +GFT+ K+AGEI +H Sbjct: 180 VSGFPPLSLVLKKLLKDEVIAKARIQPESSHGTEGFTISKAAGEIGTSHDGLLNEAELAA 239 Query: 1562 XXXXXXXXXXEIDPTQVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRP 1383 E+DP+QVENVKQRCLPNALNYPMLEEYDFRND VNPDL +ELKPHAQPRP Sbjct: 240 AAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLNMELKPHAQPRP 299 Query: 1382 YQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQF 1203 YQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI+KSCLCLATNAVSVDQWAFQF Sbjct: 300 YQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQF 359 Query: 1202 KLWSTIKEDQICRFTSDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGL 1023 LWS I +DQICRFTSDSKERF+GNAGVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGL Sbjct: 360 SLWSDISQDQICRFTSDSKERFKGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGL 419 Query: 1022 LLMDEVHVVPAQMFRKVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLV 843 LLMDEVHVVPA MFRKVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLV Sbjct: 420 LLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLV 479 Query: 842 KGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRG 663 KGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHE+QR Sbjct: 480 KGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEEQRR 539 Query: 662 DKIIVFADNLFALTEYAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSI 483 DKIIVFADNLFALTEYAMKL KPMIYGATSH ERTKIL AFKTS EVNT+FLSKVGDNSI Sbjct: 540 DKIIVFADNLFALTEYAMKLHKPMIYGATSHAERTKILHAFKTSSEVNTVFLSKVGDNSI 599 Query: 482 DIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQ- 306 DIPEANVIIQISSHAGSRRQEAQRLGRILRAKGK QDR+AGGKEEYNAFFYSLVSTDTQ Sbjct: 600 DIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQM 659 Query: 305 -------------------EMYYSTKRQQFLIDQGYSFKVITSLPPPDTGAELSYHRHDD 183 EMYYSTKRQQFLIDQGYSFKVITSLPP D+GA+LSY+ DD Sbjct: 660 IDADSSWRSISYLRCFFFLEMYYSTKRQQFLIDQGYSFKVITSLPPADSGADLSYNSLDD 719 Query: 182 QLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXXXXXXXXXXXXANGRVYMEYSTGQK 6 QL LL KVLSAGD+ VGLEQL+EDADDIAL K ANG VYMEYSTGQK Sbjct: 720 QLGLLAKVLSAGDDAVGLEQLDEDADDIALHKARRYMGSMSAMSGANGMVYMEYSTGQK 778 >ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316475|gb|EFH46898.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 779 Score = 1217 bits (3149), Expect = 0.0 Identities = 616/757 (81%), Positives = 664/757 (87%), Gaps = 15/757 (1%) Frame = -1 Query: 2228 MGNG----DKNRPSKKIKFS-KDEHRASAAEDYSSHFGENVDDDPRDGE----------G 2094 MGNG ++ RP+KKIK+ KD+ + ++ ++ E+ D+D RDGE Sbjct: 1 MGNGIKLGERGRPNKKIKYGDKDDQKMKNIQNAEDYYDED-DEDSRDGELTLSLYGEGEE 59 Query: 2093 KKRDFSKLELKPDHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYN 1914 KKRDF+KLELKPDH+NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYN Sbjct: 60 KKRDFTKLELKPDHVNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYN 119 Query: 1913 LTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFV 1734 LTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMI+FIH STANYGKVKLVLKKN+YF+ Sbjct: 120 LTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIEFIHASTANYGKVKLVLKKNRYFI 179 Query: 1733 ESPFPEVLKTLLKDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXX 1554 ESPFPEVLK LL D+VI RAR SSE G DGFT+GK++GE+E Sbjct: 180 ESPFPEVLKRLLSDDVINRARFSSEPYYGGDGFTIGKTSGELEAGPGELLNEAELAAAAE 239 Query: 1553 XXXXXXXEIDPTQVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQE 1374 EIDP QVENVKQRCLPNALNYPMLEEYDFRND VNPDL++ELKPHAQPRPYQE Sbjct: 240 EKETHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQE 299 Query: 1373 KSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLW 1194 KSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQFKLW Sbjct: 300 KSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAFQFKLW 359 Query: 1193 STIKEDQICRFTSDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLM 1014 STI++DQICRFTSDSKERFRGNAGVVVTTYNM+AF GKRSEE+EKIIE++RNREWGLLLM Sbjct: 360 STIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFSGKRSEESEKIIEEMRNREWGLLLM 419 Query: 1013 DEVHVVPAQMFRKVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGG 834 DEVHVVPA MFRKVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGG Sbjct: 420 DEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGG 479 Query: 833 FIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKI 654 FIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKI Sbjct: 480 FIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKI 539 Query: 653 IVFADNLFALTEYAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIP 474 IVFADNLFALTEYAMKLRKPMIYGATSH ERTKILEAFKTS++VNT+FLSKVGDNSIDIP Sbjct: 540 IVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIP 599 Query: 473 EANVIIQISSHAGSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYY 294 EANVIIQISSHAGSRRQEAQRLGRILRAKGK +DR+AGGKEEYNAFFYSLVSTDTQEMYY Sbjct: 600 EANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYY 659 Query: 293 STKRQQFLIDQGYSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEE 114 STKRQQFLIDQGYSFKVITSLPPPD G+ LSYH ++QL+LLGKVL+AGD+ VGLEQLEE Sbjct: 660 STKRQQFLIDQGYSFKVITSLPPPDAGSSLSYHSQEEQLSLLGKVLNAGDDLVGLEQLEE 719 Query: 113 DADDIALQKXXXXXXXXXXXXXANGRVYMEYSTGQKK 3 D D +ALQK A G VYMEY++G+ K Sbjct: 720 DTDGMALQKARRSMGSMSLMSGAKGMVYMEYNSGRHK 756 >ref|XP_002870640.1| DNA repair and transcription factor XPB1 [Arabidopsis lyrata subsp. lyrata] gi|297316476|gb|EFH46899.1| DNA repair and transcription factor XPB1 [Arabidopsis lyrata subsp. lyrata] Length = 767 Score = 1216 bits (3145), Expect = 0.0 Identities = 608/744 (81%), Positives = 657/744 (88%), Gaps = 2/744 (0%) Frame = -1 Query: 2228 MGNGDKNRPSKKIKFSKDEHRASAAEDYSSHFGENVDDDPRDGEG--KKRDFSKLELKPD 2055 MGNG++ R +KK+K+ +H+ + + D+D RDGEG KKRDF++LELKPD Sbjct: 1 MGNGERGRATKKMKYGGKDHQKMKNIQNVEDYYDEADEDSRDGEGEEKKRDFTELELKPD 60 Query: 2054 HMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG 1875 H NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEY+LTPHSLYAAVSVG Sbjct: 61 HGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYSLTPHSLYAAVSVG 120 Query: 1874 LETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLLK 1695 LETETIISVLNKLSKTKLP E+IDFIH STANYGKVKLVLKKN+YF+ESPF EVLK LL Sbjct: 121 LETETIISVLNKLSKTKLPNEIIDFIHASTANYGKVKLVLKKNRYFIESPFTEVLKRLLS 180 Query: 1694 DEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPTQ 1515 D+ I RAR+SSE G DGFT+GK++GE+E E+DP Q Sbjct: 181 DDTINRARLSSEPYYGGDGFTIGKTSGELEAGPGELLNEAELAAASEEKETHSFEVDPAQ 240 Query: 1514 VENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRAR 1335 VENVKQRCLPNALNYPMLEEYDFRND VNPDL++ELKPHAQPRPYQEKSLSKMFGNGRAR Sbjct: 241 VENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRAR 300 Query: 1334 SGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFTS 1155 SGIIVLPCGAGKSLVGVSAA RI+KSCLCLATNAVSVDQWA+QFKLWSTI++DQICRFTS Sbjct: 301 SGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAYQFKLWSTIRDDQICRFTS 360 Query: 1154 DSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFRK 975 DSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIE++RNREWGLLLMDEVHVVPA MFRK Sbjct: 361 DSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVPAHMFRK 420 Query: 974 VIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 795 VI++TKSHCKLGLTATLVREDE+ITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP Sbjct: 421 VISITKSHCKLGLTATLVREDEKITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP 480 Query: 794 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 615 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY Sbjct: 481 MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY 540 Query: 614 AMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHAG 435 AMKLRKPMIYGATSH ERTKILEAFKTS++VNT+FLSKVGDNSIDIPEANVIIQISSHAG Sbjct: 541 AMKLRKPMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAG 600 Query: 434 SRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 255 SRRQEAQRLGRILRAKGK +DR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY Sbjct: 601 SRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY 660 Query: 254 SFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXXX 75 SFKVITSLPPPD G+ L YH ++QL+LLGKVL+AGD+ VGLEQLEED D +ALQK Sbjct: 661 SFKVITSLPPPDAGSSLGYHSQEEQLSLLGKVLNAGDDLVGLEQLEEDTDGMALQKARRS 720 Query: 74 XXXXXXXXXANGRVYMEYSTGQKK 3 A GRVYMEY++G+ K Sbjct: 721 MGSMSAMSGAKGRVYMEYNSGRHK 744 >ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutrema salsugineum] gi|557106496|gb|ESQ46811.1| hypothetical protein EUTSA_v10027651mg [Eutrema salsugineum] Length = 769 Score = 1212 bits (3135), Expect = 0.0 Identities = 610/745 (81%), Positives = 662/745 (88%), Gaps = 3/745 (0%) Frame = -1 Query: 2228 MGNGDKNRPSKKIKFS-KDEHRASAAEDYSSHFGENVDDDPRDGEGKK--RDFSKLELKP 2058 MG+G++ R SKK+K+S KD+ + ++ + G++ D+D RDGEG+K RD+S+LELKP Sbjct: 1 MGHGERGRSSKKMKYSGKDDQKMKNIQNEEYYLGDDADEDSRDGEGEKKDRDYSELELKP 60 Query: 2057 DHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 1878 DH+NRPLWACADGRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV Sbjct: 61 DHVNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 120 Query: 1877 GLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLL 1698 GLETETIISVLNKLSKTKLPKEMIDFI+ STANYGKVKLVLKKN+YF+ESPFPEVLKTLL Sbjct: 121 GLETETIISVLNKLSKTKLPKEMIDFIYASTANYGKVKLVLKKNRYFIESPFPEVLKTLL 180 Query: 1697 KDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPT 1518 D VI RAR SSE G DGFTVGK++GE+E EIDP Sbjct: 181 SDGVISRARFSSEPYYGGDGFTVGKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPA 240 Query: 1517 QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRA 1338 QVENVKQRCLP+ LNYPMLEEYDFRND VNPDL++ELKPHAQPRPYQEKSLSKMFGNGRA Sbjct: 241 QVENVKQRCLPSELNYPMLEEYDFRNDNVNPDLDIELKPHAQPRPYQEKSLSKMFGNGRA 300 Query: 1337 RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFT 1158 RSGIIVLPCGAGKSLVGVSAA RI+KS LCLATNAVSVDQWAFQFKLWSTI++DQICRFT Sbjct: 301 RSGIIVLPCGAGKSLVGVSAAARIKKSVLCLATNAVSVDQWAFQFKLWSTIRDDQICRFT 360 Query: 1157 SDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFR 978 SDSKE+FRGNAGVVVTTYNM+AFGGKRSE+++ IIED+RNREWGLLLMDEVHVVPA MFR Sbjct: 361 SDSKEKFRGNAGVVVTTYNMVAFGGKRSEDSQMIIEDMRNREWGLLLMDEVHVVPANMFR 420 Query: 977 KVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 798 KVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC Sbjct: 421 KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 480 Query: 797 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 618 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE Sbjct: 481 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 540 Query: 617 YAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHA 438 YAMKLRKPMIYGATSH ERTKILEAFKTS+++NT+FLSKVGDNSIDIPEANVIIQISSHA Sbjct: 541 YAMKLRKPMIYGATSHIERTKILEAFKTSKDLNTVFLSKVGDNSIDIPEANVIIQISSHA 600 Query: 437 GSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 258 GSRRQEAQRLGRILRAKGK +DR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG Sbjct: 601 GSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 660 Query: 257 YSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXX 78 YSFKVITSLPPPD GA LSYH ++QL+LL KVL+AGD+ VGLEQLEED D +ALQK Sbjct: 661 YSFKVITSLPPPDAGASLSYHSQEEQLSLLAKVLNAGDDLVGLEQLEEDTDGMALQK-ER 719 Query: 77 XXXXXXXXXXANGRVYMEYSTGQKK 3 A G VYMEY++G+ K Sbjct: 720 RNRSLSEMSGAKGMVYMEYNSGRHK 744 >ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Cicer arietinum] Length = 765 Score = 1211 bits (3134), Expect = 0.0 Identities = 616/744 (82%), Positives = 661/744 (88%), Gaps = 3/744 (0%) Frame = -1 Query: 2228 MGNGDKNRPSKKIKFSK---DEHRASAAEDYSSHFGENVDDDPRDGEGKKRDFSKLELKP 2058 MG+G+K RP KK K S ++ R A+D ++ G DD D +GK +DFSKLELKP Sbjct: 1 MGHGEK-RPFKKFKGSSSKFEDPRKGFADDDDAYGG---DDPYDDDDGKTKDFSKLELKP 56 Query: 2057 DHMNRPLWACADGRIFLETFSSLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 1878 DH NRPLWAC +GRIFLETFS LYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV Sbjct: 57 DHPNRPLWACDNGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSV 116 Query: 1877 GLETETIISVLNKLSKTKLPKEMIDFIHNSTANYGKVKLVLKKNKYFVESPFPEVLKTLL 1698 GLETETIISVLNKLSKTKLPKEMI FIH+STANYGKVKLVLKKN+YFVESPFPEVLKTLL Sbjct: 117 GLETETIISVLNKLSKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTLL 176 Query: 1697 KDEVIGRARISSEGSRGADGFTVGKSAGEIEGTHXXXXXXXXXXXXXXXXXXXXXEIDPT 1518 +D+ I RARI+SEG G DGFT+ K+AGEIEGTH EIDP+ Sbjct: 177 RDDGISRARITSEGMHG-DGFTITKAAGEIEGTHDELLNEAEVAAAAEEKEAHAFEIDPS 235 Query: 1517 QVENVKQRCLPNALNYPMLEEYDFRNDPVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRA 1338 QVENVKQRCLPNALNYPMLEEYDFRND VNPDLE+ELKP AQPRPYQEKSLSKMFGNGRA Sbjct: 236 QVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLEMELKPQAQPRPYQEKSLSKMFGNGRA 295 Query: 1337 RSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIKEDQICRFT 1158 RSGIIVLPCGAGKSLVGVSAACRI+KSCLCLATNAVSVDQWAFQFKLWSTI+E+QICRFT Sbjct: 296 RSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFT 355 Query: 1157 SDSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEDIRNREWGLLLMDEVHVVPAQMFR 978 SDSKERFRGNAGVVVTTYNM+AFGGKRSEE+EKIIE+IRNREWGLLLMDEVHVVPA MFR Sbjct: 356 SDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFR 415 Query: 977 KVIALTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 798 KVI++TKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC Sbjct: 416 KVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWC 475 Query: 797 PMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTE 618 PMTKEFFAEYLKKENSKK+QALYVMNPNKFRACEFLI +HE+ RGDKIIVFADNLFALTE Sbjct: 476 PMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLINYHERARGDKIIVFADNLFALTE 535 Query: 617 YAMKLRKPMIYGATSHPERTKILEAFKTSREVNTIFLSKVGDNSIDIPEANVIIQISSHA 438 YAMKLRKPMIYGATSH ERTKIL+AFKTS++VNTIFLSKVGDNSIDIPEANVIIQISSHA Sbjct: 536 YAMKLRKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHA 595 Query: 437 GSRRQEAQRLGRILRAKGKPQDRVAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 258 GSRRQEAQRLGRILRAKGK QDR+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG Sbjct: 596 GSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQG 655 Query: 257 YSFKVITSLPPPDTGAELSYHRHDDQLALLGKVLSAGDNEVGLEQLEEDADDIALQKXXX 78 YSFKVITSLPP D G+ L+YH +DQL+LLGKVL+AGD+ VGLEQLEED+D++AL+ Sbjct: 656 YSFKVITSLPPSDEGSRLNYHHLEDQLSLLGKVLNAGDDAVGLEQLEEDSDELALRSARR 715 Query: 77 XXXXXXXXXXANGRVYMEYSTGQK 6 A G VYMEYSTG+K Sbjct: 716 SQASMSAMSGAKGMVYMEYSTGRK 739