BLASTX nr result

ID: Mentha24_contig00008468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00008468
         (396 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU28166.1| hypothetical protein MIMGU_mgv1a002966mg [Mimulus...    69   5e-10
gb|EXB58324.1| Ribosome maturation factor rimM [Morus notabilis]       61   1e-07
ref|XP_006355633.1| PREDICTED: uncharacterized protein LOC102604...    59   5e-07
ref|XP_003629892.1| Ribosome maturation factor rimM [Medicago tr...    59   7e-07
dbj|BAE71246.1| hypothetical protein [Trifolium pratense]              59   9e-07
ref|XP_004232981.1| PREDICTED: uncharacterized protein LOC101255...    58   1e-06
ref|XP_006398336.1| hypothetical protein EUTSA_v10000812mg [Eutr...    58   2e-06
gb|EPS62841.1| hypothetical protein M569_11947, partial [Genlise...    57   2e-06
ref|XP_004504243.1| PREDICTED: uncharacterized protein LOC101509...    57   2e-06
ref|NP_568663.2| RimM-like 16S rRNA processing protein [Arabidop...    56   6e-06
ref|XP_004293660.1| PREDICTED: uncharacterized protein LOC101308...    56   6e-06
ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251...    55   8e-06

>gb|EYU28166.1| hypothetical protein MIMGU_mgv1a002966mg [Mimulus guttatus]
          Length = 621

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 46/110 (41%), Positives = 53/110 (48%)
 Frame = +2

Query: 47  MQSTSIICCSSNSLPRSLDSFDSHPPTLAPRKLLNSSPKFPYSSKLPPVSLHIRPLSHFL 226
           MQS SI+CCSSNSL     S   H P   P  LL S+ +    +     +L         
Sbjct: 1   MQSPSILCCSSNSL-----SLSFHFPISPPSALLVSAAEELVEATSSASTL--------- 46

Query: 227 CRXXXXXXXXXXXXXXXXFVETGYIFGVHGFQGHVRVKPNTDFPDLRFSK 376
                              +ETGYIFGVHGF G VRVK +TDFPDLRFSK
Sbjct: 47  -------------------IETGYIFGVHGFHGEVRVKTSTDFPDLRFSK 77


>gb|EXB58324.1| Ribosome maturation factor rimM [Morus notabilis]
          Length = 696

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 43/109 (39%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
 Frame = +2

Query: 47  MQSTSIICCSSNSLPRSLDSFDS-HPPTLAPRKLLNSSPKFPYSSKLPPVSLHIRPLSHF 223
           MQ  S +C SSN LP++L +  + H   +  R    S+      S+LP   L I  LS  
Sbjct: 1   MQRVSFLC-SSNPLPQALTALPTFHGLAIPFRSRPISTVTVSSPSRLPLSRLLIPRLSLS 59

Query: 224 LCRXXXXXXXXXXXXXXXXFVETGYIFGVHGFQGHVRVKPNTDFPDLRF 370
             +                FVE GYI  VHG QG  RVKPNTDFP+LRF
Sbjct: 60  PLQNTATQEHVETAETDLGFVEVGYISNVHGLQGEARVKPNTDFPELRF 108


>ref|XP_006355633.1| PREDICTED: uncharacterized protein LOC102604214 [Solanum tuberosum]
          Length = 645

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 42/111 (37%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
 Frame = +2

Query: 47  MQSTSIICCSSNSLPRSLDSFDSHPPTLAPRKLLNSSPKFPYSSKLPPVSLHIRPLSHF- 223
           MQ +S + CSSNS+   +    S   TL  R       + P S K+     H    + F 
Sbjct: 1   MQGSSALSCSSNSISAPVGLCCSQRLTLPFRNQRIGFLENPSSLKI----FHFHRNTTFP 56

Query: 224 LCRXXXXXXXXXXXXXXXXFVETGYIFGVHGFQGHVRVKPNTDFPDLRFSK 376
           L                  FVETGYI+ VHG QG VRVK  TDFP+LRFS+
Sbjct: 57  LLNCTATEEIVEASETEGLFVETGYIYSVHGLQGEVRVKATTDFPELRFSQ 107


>ref|XP_003629892.1| Ribosome maturation factor rimM [Medicago truncatula]
           gi|355523914|gb|AET04368.1| Ribosome maturation factor
           rimM [Medicago truncatula]
          Length = 667

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 281 FVETGYIFGVHGFQGHVRVKPNTDFPDLRFS 373
           FV+ GY+ GVHGFQG VRVKPNTDFP+LRFS
Sbjct: 67  FVDIGYVSGVHGFQGDVRVKPNTDFPELRFS 97


>dbj|BAE71246.1| hypothetical protein [Trifolium pratense]
          Length = 669

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +2

Query: 281 FVETGYIFGVHGFQGHVRVKPNTDFPDLRFS 373
           F++ GY+ GVHGFQG VRVKPNTDFP+LRFS
Sbjct: 78  FIDIGYVSGVHGFQGDVRVKPNTDFPELRFS 108


>ref|XP_004232981.1| PREDICTED: uncharacterized protein LOC101255162 [Solanum
           lycopersicum]
          Length = 659

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/112 (37%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
 Frame = +2

Query: 44  SMQSTSIICCSSNSLPRSLDSFDSHPPTLAPRKLLNSSPKFPYSSKLPPVSLHI-RPLSH 220
           +MQ +S + CSSNS+   +    S   TL  R       + P S K+     H  R  + 
Sbjct: 5   NMQGSSALSCSSNSISAPVGLCCSQRLTLPFRNQRIGFLENPSSLKI----FHFHRNTTL 60

Query: 221 FLCRXXXXXXXXXXXXXXXXFVETGYIFGVHGFQGHVRVKPNTDFPDLRFSK 376
            L                  FVETGYI+ VHG QG VRVK  TDFP+LRFS+
Sbjct: 61  PLLNCTATEEIVEASETEGLFVETGYIYSVHGLQGEVRVKATTDFPELRFSQ 112


>ref|XP_006398336.1| hypothetical protein EUTSA_v10000812mg [Eutrema salsugineum]
           gi|557099425|gb|ESQ39789.1| hypothetical protein
           EUTSA_v10000812mg [Eutrema salsugineum]
          Length = 654

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 46/124 (37%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
 Frame = +2

Query: 47  MQSTSIICCSSNSLPRSLDSFDSHPPTLAPRKLLNS--SPKFPYSSKLPPVSLHIRPLSH 220
           MQ  S + CSS S+            T  P +LLN   S  FP     P VS   R   H
Sbjct: 1   MQRASALLCSSTSI------------TFKPFQLLNPNISLHFPTFELSPSVSSLSRSPCH 48

Query: 221 F-LCRXXXXXXXXXXXXXXXXFVET-----------GYIFGVHGFQGHVRVKPNTDFPDL 364
           F L R                 VET           G++ GVHG QG + +KPNTDFPDL
Sbjct: 49  FSLVRARGKSSFIVRSTATQEVVETSDTSGLDLVEVGFLSGVHGLQGEICIKPNTDFPDL 108

Query: 365 RFSK 376
           RFSK
Sbjct: 109 RFSK 112


>gb|EPS62841.1| hypothetical protein M569_11947, partial [Genlisea aurea]
          Length = 204

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +2

Query: 281 FVETGYIFGVHGFQGHVRVKPNTDFPDLRFSK 376
           FVETGYI+ VHG QG V+VKP TDFP+LRFSK
Sbjct: 15  FVETGYIYRVHGLQGEVKVKPATDFPELRFSK 46


>ref|XP_004504243.1| PREDICTED: uncharacterized protein LOC101509004 [Cicer arietinum]
          Length = 665

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +2

Query: 281 FVETGYIFGVHGFQGHVRVKPNTDFPDLRFS 373
           F+E GY+ G HGFQG +RVKPNTDFP LRFS
Sbjct: 75  FIEIGYVSGAHGFQGEIRVKPNTDFPQLRFS 105


>ref|NP_568663.2| RimM-like 16S rRNA processing protein [Arabidopsis thaliana]
           gi|10177579|dbj|BAB10810.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008000|gb|AED95383.1|
           RimM-like 16S rRNA processing protein [Arabidopsis
           thaliana]
          Length = 653

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/118 (36%), Positives = 51/118 (43%), Gaps = 14/118 (11%)
 Frame = +2

Query: 65  ICCSSNSLPRSLDSFDSHPPTLAPRKLLN--SSPKFPYSSKLPPVS-----------LHI 205
           + CSS S+            T  P +L N  SS +FP      PVS           L  
Sbjct: 6   LLCSSTSI------------TFTPIQLFNPNSSHRFPRFELSRPVSALSRTKCHLSLLRA 53

Query: 206 RPLSHFLCRXXXXXXXXXXXXXXXX-FVETGYIFGVHGFQGHVRVKPNTDFPDLRFSK 376
           R  S FL R                  VE G++ GVHG QG + +KPNTDFPDLRFSK
Sbjct: 54  RGKSSFLTRSTATDEAVETSSNSGLDLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSK 111


>ref|XP_004293660.1| PREDICTED: uncharacterized protein LOC101308845 [Fragaria vesca
           subsp. vesca]
          Length = 654

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/118 (35%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
 Frame = +2

Query: 47  MQSTSIICCSSNSLPRSLDSFDSHPPT--------LAPRKLLNSSPKFPYSSKLPPVSLH 202
           MQ  SI+C SS  LP       + PPT        L  R L   S   P   +LP   LH
Sbjct: 1   MQRASILCSSSPLLP-------TFPPTTHKLAAASLQTRHLRLDSVSSPL--RLPLNPLH 51

Query: 203 IRPLSHFLCRXXXXXXXXXXXXXXXXFVETGYIFGVHGFQGHVRVKPNTDFPDLRFSK 376
              L+                     FV  GY+  VHG QG +RVKP+TDFP+LRF++
Sbjct: 52  SYRLALPPLHSTATEEIVETAEAESGFVSVGYVANVHGLQGEIRVKPSTDFPELRFAE 109


>ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251997 [Vitis vinifera]
           gi|297740629|emb|CBI30811.3| unnamed protein product
           [Vitis vinifera]
          Length = 665

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = +2

Query: 281 FVETGYIFGVHGFQGHVRVKPNTDFPDLRFSK 376
           FVE GYI  VHG QG +RVKPNTDFP+LRF++
Sbjct: 77  FVEVGYISSVHGLQGEIRVKPNTDFPELRFAE 108


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