BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00007604
         (813 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU45954.1| hypothetical protein MIMGU_mgv1a007767mg [Mimulus...   164   1e-74
gb|EPS67672.1| hypothetical protein M569_07102, partial [Genlise...   157   4e-68
ref|XP_004241212.1| PREDICTED: transcription initiation factor I...   145   1e-65
ref|XP_006350788.1| PREDICTED: transcription initiation factor I...   141   2e-64
ref|XP_002520518.1| protein with unknown function [Ricinus commu...   125   6e-57
ref|XP_006379027.1| hypothetical protein POPTR_0009s04150g [Popu...   136   2e-56
ref|XP_004486980.1| PREDICTED: transcription initiation factor I...   133   1e-54
gb|EXC10718.1| Transcription initiation factor IIA large subunit...   132   6e-53
ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Popu...   119   3e-52
ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241...   119   5e-52
ref|XP_006595034.1| PREDICTED: transcription initiation factor I...   118   7e-51
ref|XP_003543527.1| PREDICTED: transcription initiation factor I...   118   7e-51
ref|XP_003547006.1| PREDICTED: transcription initiation factor I...   114   5e-50
ref|XP_007016334.1| Transcription initiation factor IIA subunit ...   119   6e-50
ref|XP_006369541.1| hypothetical protein POPTR_0001s25120g [Popu...   119   1e-49
ref|XP_003537974.1| PREDICTED: transcription initiation factor I...   111   4e-49
ref|XP_002298340.1| transcription factor IIA large subunit famil...   119   6e-49
ref|XP_004143132.1| PREDICTED: transcription initiation factor I...   112   8e-49
ref|XP_003597404.1| Transcription factor/ transcription initiati...   125   8e-49
ref|NP_850937.1| transcription factor IIA, alpha/beta subunit [A...   113   2e-47

>gb|EYU45954.1| hypothetical protein MIMGU_mgv1a007767mg [Mimulus guttatus]
          Length = 396

 Score =  164 bits (416), Expect(2) = 1e-74
 Identities = 89/132 (67%), Positives = 95/132 (71%), Gaps = 4/132 (3%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 582
           S++TSNVYIHVIEDVINKVRDEF   GGPG+GVL+ELQGLWELKMM+AGAILGPIDRSA 
Sbjct: 3   SSTTSNVYIHVIEDVINKVRDEFNGGGGPGEGVLSELQGLWELKMMEAGAILGPIDRSAS 62

Query: 581 QKGAGGPITPTPVHDLNVXXXXXXXXXXXTAD----XXXXXXXXXXXXXXXXPGMAQTPL 414
           QKGAGGPITP PVHDLNV           TAD                    PGMAQTPL
Sbjct: 63  QKGAGGPITPNPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPLPGTAQTPLPGMAQTPL 122

Query: 413 PGTAQTPLPGND 378
           PGTAQTPL G+D
Sbjct: 123 PGTAQTPLTGSD 134



 Score =  143 bits (360), Expect(2) = 1e-74
 Identities = 72/119 (60%), Positives = 88/119 (73%)
 Frame = -1

Query: 357 NENGGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFF 178
           N+N G  ++KAG GRPS YM PPS W +QRP LDVNVAYVEGREE ++GG +   TQDFF
Sbjct: 157 NDNVGVSEVKAGPGRPSPYMQPPSPWQNQRPPLDVNVAYVEGREESERGGPHQQTTQDFF 216

Query: 177 LMPSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKVGPGSISKMPDQEGSLSCRIPQ 1
            + SGKRKRD+ PP +Q+GGYIPQQDGAGD LS+ +KV    +  +  Q G+ S RIPQ
Sbjct: 217 -VASGKRKRDNFPPQYQAGGYIPQQDGAGDNLSDEMKV----VLDVIGQGGTSSSRIPQ 270


>gb|EPS67672.1| hypothetical protein M569_07102, partial [Genlisea aurea]
          Length = 240

 Score =  157 bits (397), Expect(2) = 4e-68
 Identities = 87/129 (67%), Positives = 93/129 (72%), Gaps = 1/129 (0%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 582
           S++TSNVY HVIEDVINKVRDEFIN+GGPG+ VL ELQGLWELKMMQAGAILGPIDRS+ 
Sbjct: 1   SSTTSNVYGHVIEDVINKVRDEFINNGGPGESVLNELQGLWELKMMQAGAILGPIDRSSM 60

Query: 581 QKG-AGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 405
           QKG AGGPITP P+HDLNV           TAD                PG AQTPLPG 
Sbjct: 61  QKGPAGGPITPNPLHDLNVPYDGSEEYETPTAD--------LLFPPTPLPGTAQTPLPGM 112

Query: 404 AQTPLPGND 378
           AQTPLPG D
Sbjct: 113 AQTPLPGTD 121



 Score =  128 bits (322), Expect(2) = 4e-68
 Identities = 61/98 (62%), Positives = 74/98 (75%)
 Frame = -1

Query: 357 NENGGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFF 178
           NENGG   +KA  GRP+ +M PPSSW++Q P LDVNVAYVEGREE ++G  N   TQDFF
Sbjct: 142 NENGGVPDVKAVPGRPNMHMQPPSSWINQWPPLDVNVAYVEGREENERGALNQPATQDFF 201

Query: 177 LMPSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKV 64
            + SGKRKRDD+PP ++SGG IPQQDGA D   + +KV
Sbjct: 202 -VNSGKRKRDDIPPQYRSGGRIPQQDGASDFPPDEMKV 238


>ref|XP_004241212.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Solanum lycopersicum]
          Length = 401

 Score =  145 bits (366), Expect(2) = 1e-65
 Identities = 65/102 (63%), Positives = 80/102 (78%)
 Frame = -1

Query: 357 NENGGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFF 178
           N+ GG  ++KAG GRPS +MHPPS WL+QRP LDVNVAYVEGREEGD+GG+    TQDFF
Sbjct: 156 NDTGGATELKAGPGRPSPFMHPPSPWLNQRPPLDVNVAYVEGREEGDRGGSQQPMTQDFF 215

Query: 177 LMPSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKVGPGS 52
           +  +GKRKR+D PP + +GGYIPQQDGA D + + +K G GS
Sbjct: 216 MNSTGKRKREDFPPQYHNGGYIPQQDGAADSIYDNIKSGEGS 257



 Score =  132 bits (331), Expect(2) = 1e-65
 Identities = 75/127 (59%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 582
           S++TSNVYIHVIEDVI+KVRDEFIN+GGPG+ +L ELQ LWE+KMM AGAILG I+R++ 
Sbjct: 3   SSTTSNVYIHVIEDVISKVRDEFINNGGPGESILKELQALWEVKMMNAGAILGTIERNSA 62

Query: 581 QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 405
            K   GGPI  TPVHDLN+           TAD                PG AQTPLPGT
Sbjct: 63  AKATPGGPI--TPVHDLNMPYEGNEEYETPTAD----ILFPPTPLQTPLPGTAQTPLPGT 116

Query: 404 AQTPLPG 384
            QTPLPG
Sbjct: 117 VQTPLPG 123


>ref|XP_006350788.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Solanum tuberosum]
          Length = 403

 Score =  141 bits (356), Expect(2) = 2e-64
 Identities = 66/103 (64%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
 Frame = -1

Query: 357 NENGGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREE-GDKGGANHTGTQDF 181
           N+ GG  ++KAG GRPS +MHPPS WL+QRP LDVNVAYVEGREE GD+GG+    TQDF
Sbjct: 156 NDTGGATELKAGPGRPSPFMHPPSPWLNQRPPLDVNVAYVEGREEVGDRGGSQQPMTQDF 215

Query: 180 FLMPSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKVGPGS 52
           F+  +GKRKR+D PP + +GGYIPQQDGA D + + LK G GS
Sbjct: 216 FMNSAGKRKREDFPPQYHNGGYIPQQDGAADSIYDNLKSGEGS 258



 Score =  132 bits (331), Expect(2) = 2e-64
 Identities = 75/127 (59%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 582
           S++TSNVYIHVIEDVI+KVRDEFIN+GGPG+ +L ELQ LWE+KMM AGAILG I+R++ 
Sbjct: 3   SSTTSNVYIHVIEDVISKVRDEFINNGGPGESILKELQALWEVKMMNAGAILGTIERNSA 62

Query: 581 QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 405
            K   GGPI  TPVHDLN+           TAD                PG AQTPLPGT
Sbjct: 63  AKATPGGPI--TPVHDLNMPYEGNEEYETPTAD----ILFPPTPLQTPLPGTAQTPLPGT 116

Query: 404 AQTPLPG 384
            QTPLPG
Sbjct: 117 VQTPLPG 123


>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
           gi|223540360|gb|EEF41931.1| protein with unknown
           function [Ricinus communis]
          Length = 383

 Score =  125 bits (314), Expect(2) = 6e-57
 Identities = 73/131 (55%), Positives = 84/131 (64%)
 Frame = -2

Query: 773 MASTSTSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPID 594
           MA+TST+TS VYIHVIEDV+NKVRDEFIN+ GPG+ VL ELQ +WELKMMQAG I GPI+
Sbjct: 1   MAATSTTTSTVYIHVIEDVVNKVRDEFINN-GPGETVLNELQAIWELKMMQAGVICGPIE 59

Query: 593 RSAKQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPL 414
           RS+  K   G +  TPVHDLNV           TA+                     TPL
Sbjct: 60  RSSGAKTVPGGVI-TPVHDLNVPYEGTEEYETPTAEIL----------------FPPTPL 102

Query: 413 PGTAQTPLPGN 381
           PGTAQTPLPG+
Sbjct: 103 PGTAQTPLPGS 113



 Score =  123 bits (308), Expect(2) = 6e-57
 Identities = 58/92 (63%), Positives = 69/92 (75%)
 Frame = -1

Query: 339 GQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMPSGK 160
           G  +A AGRPS YM PPS W++QRP LDVN+AYVEGREE D+G +N   TQDFF   SGK
Sbjct: 139 GSTEAKAGRPSPYMQPPSPWINQRPPLDVNIAYVEGREEADRGTSNQPLTQDFFTGASGK 198

Query: 159 RKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKV 64
           RKR+D    + +GG+IPQQDGAGD   EVL+V
Sbjct: 199 RKREDFAAQYNNGGFIPQQDGAGDTPFEVLQV 230


>ref|XP_006379027.1| hypothetical protein POPTR_0009s04150g [Populus trichocarpa]
           gi|550330998|gb|ERP56824.1| hypothetical protein
           POPTR_0009s04150g [Populus trichocarpa]
          Length = 303

 Score =  136 bits (342), Expect(2) = 2e-56
 Identities = 79/131 (60%), Positives = 88/131 (67%), Gaps = 2/131 (1%)
 Frame = -2

Query: 767 STSTSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRS 588
           ++S +TS VYI+VIEDVINKVRDEFIN+GGPG+ VL ELQGLWE KMMQAGAI G IDRS
Sbjct: 2   ASSDATSPVYINVIEDVINKVRDEFINNGGPGETVLYELQGLWETKMMQAGAICGTIDRS 61

Query: 587 AKQK--GAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPL 414
           +  K    GGPI  TPVHDLNV           TA+                PG AQTPL
Sbjct: 62  SANKLPVPGGPI--TPVHDLNVPYEGTEEYETPTAEILFPPTPMQTPMQTPLPGSAQTPL 119

Query: 413 PGTAQTPLPGN 381
           PG+AQTPLPGN
Sbjct: 120 PGSAQTPLPGN 130



 Score =  110 bits (275), Expect(2) = 2e-56
 Identities = 57/94 (60%), Positives = 70/94 (74%), Gaps = 2/94 (2%)
 Frame = -1

Query: 339 GQIKAGAGRPSQYMHPPSSWLSQRP--SLDVNVAYVEGREEGDKGGANHTGTQDFFLMPS 166
           G     AGRPS +M PP+ W+ QRP  S+DVNVAYVEGR+E D+G ++   TQDFF MPS
Sbjct: 163 GSTDGKAGRPSPFMQPPT-WMHQRPPLSVDVNVAYVEGRDEVDRGTSHQALTQDFF-MPS 220

Query: 165 GKRKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKV 64
           GKRKR+D  P + +GG+IPQQDGAGD  SEV +V
Sbjct: 221 GKRKREDFAPKYNNGGFIPQQDGAGDSASEVSQV 254


>ref|XP_004486980.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Cicer arietinum]
          Length = 389

 Score =  133 bits (335), Expect(2) = 1e-54
 Identities = 70/128 (54%), Positives = 83/128 (64%), Gaps = 12/128 (9%)
 Frame = -1

Query: 348 GGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMP 169
           GG   +K G  RP  YM PPS W++QRP LDVNVAYVEGREE D+G +N   TQDFF MP
Sbjct: 137 GGNADVKGG--RPGTYMQPPSPWINQRPPLDVNVAYVEGREEADRGASNQPMTQDFFTMP 194

Query: 168 SGKRKRDDVPPPFQSGGYIPQQDGAGDVLSE--VLKVGPGSIS----------KMPDQEG 25
            GKRKR+D+PP + +GGYIPQQDG+GD  S    ++V  G IS          KMP    
Sbjct: 195 GGKRKRNDLPPQYDAGGYIPQQDGSGDAASGNFEIEVCGGGISINSQHTSFKGKMPADLE 254

Query: 24  SLSCRIPQ 1
            L+ RIPQ
Sbjct: 255 RLASRIPQ 262



 Score =  107 bits (267), Expect(2) = 1e-54
 Identities = 64/125 (51%), Positives = 76/125 (60%), Gaps = 2/125 (1%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRS-- 588
           +++TS VYI VIEDV+ KVRDEF N+GGPG+ VL ELQ +WE KM+QAGA+LGPI+RS  
Sbjct: 3   ASTTSQVYIDVIEDVMVKVRDEFTNNGGPGEEVLRELQAIWESKMIQAGAVLGPIERSSG 62

Query: 587 AKQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPG 408
           A +   GGPI  TPVHDLNV           TA+                    QTPLPG
Sbjct: 63  ANKPTPGGPI--TPVHDLNVPYEGTEEYETPTAEILFPPTPLQTP--------IQTPLPG 112

Query: 407 TAQTP 393
           T  TP
Sbjct: 113 TGDTP 117


>gb|EXC10718.1| Transcription initiation factor IIA large subunit [Morus notabilis]
          Length = 404

 Score =  132 bits (333), Expect(2) = 6e-53
 Identities = 59/95 (62%), Positives = 74/95 (77%)
 Frame = -1

Query: 348 GGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFFLMP 169
           GG G      GRPS YM PPS W+SQRPSLDVN+AYVEGR+E D+G ++   TQDFF+ P
Sbjct: 139 GGGGNTDMKGGRPSPYMQPPSPWMSQRPSLDVNIAYVEGRDEVDRGTSHQPPTQDFFMPP 198

Query: 168 SGKRKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKV 64
           SGKRKRD++P  +Q+GG++PQQDGAGDV  EV ++
Sbjct: 199 SGKRKRDELPSQYQAGGFLPQQDGAGDVAPEVFEI 233



 Score =  102 bits (254), Expect(2) = 6e-53
 Identities = 65/127 (51%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 582
           +TSTS VY+ VIEDVI+KVRDEFIN+G PG+ VL ELQG+WE KMM AG +  PI+RS  
Sbjct: 2   ATSTSAVYVSVIEDVISKVRDEFINNG-PGEDVLKELQGMWEAKMMHAGVVNSPIERSGA 60

Query: 581 QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 405
            K   GGPI  TPVHDLNV           TAD                     TPL   
Sbjct: 61  AKPTPGGPI--TPVHDLNVPYEGTEEYETPTADML----------------FPPTPLQTP 102

Query: 404 AQTPLPG 384
            QTPLPG
Sbjct: 103 IQTPLPG 109


>ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Populus trichocarpa]
           gi|550348134|gb|ERP66111.1| hypothetical protein
           POPTR_0001s25120g [Populus trichocarpa]
          Length = 405

 Score =  119 bits (298), Expect(2) = 3e-52
 Identities = 75/133 (56%), Positives = 85/133 (63%), Gaps = 2/133 (1%)
 Frame = -2

Query: 773 MASTSTSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPID 594
           MAS++TST  VY  VIEDVI+KVRDEFIN+GGPG+ VL+ELQGLWE K+MQAG + GPI 
Sbjct: 1   MASSATST--VYTEVIEDVIDKVRDEFINNGGPGETVLSELQGLWEKKLMQAGVLSGPIV 58

Query: 593 RSA--KQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQT 420
           RS+  KQ   GG    TPVHDLNV           TA+                PG AQT
Sbjct: 59  RSSANKQLVPGG---LTPVHDLNVPYEGTEEYETPTAE--------ILFPPTPLPGSAQT 107

Query: 419 PLPGTAQTPLPGN 381
           PLPG  QTPLPGN
Sbjct: 108 PLPGNVQTPLPGN 120



 Score =  113 bits (283), Expect(2) = 3e-52
 Identities = 59/102 (57%), Positives = 73/102 (71%)
 Frame = -1

Query: 357 NENGGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFF 178
           ++ GG   +KAG  RPS +M  PS  + QRP LDVNVAYVEGR+E D+GG++ T TQDFF
Sbjct: 150 SDAGGSTDVKAG--RPSHFMQSPSPLMHQRPPLDVNVAYVEGRDEVDRGGSHQTLTQDFF 207

Query: 177 LMPSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKVGPGS 52
            M SGKRKR D  P + +GG+IPQQDGA D  SEV +V  G+
Sbjct: 208 -MSSGKRKRGDFAPKYNNGGFIPQQDGAVDSASEVSQVSQGN 248


>ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera]
           gi|297746029|emb|CBI16085.3| unnamed protein product
           [Vitis vinifera]
          Length = 393

 Score =  119 bits (297), Expect(2) = 5e-52
 Identities = 57/96 (59%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
 Frame = -1

Query: 345 GEGQIKAGAGRPSQYMHPPSSWLSQRP--SLDVNVAYVEGREEGDKGGANHTGTQDFFLM 172
           G G     +GRP  YM PPS W+ QRP  S+DVNVAYVEGR+EGD+G +    TQDFF+M
Sbjct: 136 GGGATDMKSGRPPSYMPPPSPWMQQRPPLSVDVNVAYVEGRDEGDRGNSQQPLTQDFFMM 195

Query: 171 PSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKV 64
            SGKRKR+D P  + + GYIPQQDGAGD   EV +V
Sbjct: 196 SSGKRKREDFPSQYHTSGYIPQQDGAGDPAPEVFEV 231



 Score =  113 bits (282), Expect(2) = 5e-52
 Identities = 63/127 (49%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 582
           S+ TS VY+ VIEDVINKVRDEF+N+GGPG+ VL+ELQG+WE+KM+QAG + GPI+RS  
Sbjct: 4   SSMTSTVYVSVIEDVINKVRDEFVNNGGPGESVLSELQGIWEMKMVQAGVVTGPIERSTA 63

Query: 581 QKGAGGPITPT-PVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 405
            K   G   PT PVHDLNV           TA+                     TPL   
Sbjct: 64  PKQTSGAPAPTPPVHDLNVPYEGTEEYETPTAEIL----------------FPPTPLQTP 107

Query: 404 AQTPLPG 384
            QTPLPG
Sbjct: 108 IQTPLPG 114


>ref|XP_006595034.1| PREDICTED: transcription initiation factor IIA large subunit-like
           isoform X2 [Glycine max]
          Length = 409

 Score =  118 bits (295), Expect(2) = 7e-51
 Identities = 55/90 (61%), Positives = 66/90 (73%)
 Frame = -1

Query: 357 NENGGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFF 178
           N+ GG    K    RP+ YM  PS W++QRP LDVNVAYVEGR+E D+G +N   TQDFF
Sbjct: 132 NDTGGNADGKGA--RPAPYMQSPSPWMNQRPPLDVNVAYVEGRDEADRGTSNQPPTQDFF 189

Query: 177 LMPSGKRKRDDVPPPFQSGGYIPQQDGAGD 88
            MPSGKRKR+D+   + +GGYIPQQDGAGD
Sbjct: 190 TMPSGKRKRNDLTSQYNAGGYIPQQDGAGD 219



 Score =  110 bits (274), Expect(2) = 7e-51
 Identities = 66/127 (51%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 582
           +++TS VYI VIEDV+ KVRDEF+N+GGPG+ VL ELQ +WE KMMQAGA+LGPI+RS  
Sbjct: 3   ASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERSTA 62

Query: 581 QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 405
            K   GGPI  TPVHDLNV           TAD                     TPL   
Sbjct: 63  AKPTPGGPI--TPVHDLNVPYEGTDEYETPTADML----------------FPPTPLQTP 104

Query: 404 AQTPLPG 384
            QTPLPG
Sbjct: 105 IQTPLPG 111


>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
           isoformX1 [Glycine max]
          Length = 391

 Score =  118 bits (295), Expect(2) = 7e-51
 Identities = 55/90 (61%), Positives = 66/90 (73%)
 Frame = -1

Query: 357 NENGGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFF 178
           N+ GG    K    RP+ YM  PS W++QRP LDVNVAYVEGR+E D+G +N   TQDFF
Sbjct: 132 NDTGGNADGKGA--RPAPYMQSPSPWMNQRPPLDVNVAYVEGRDEADRGTSNQPPTQDFF 189

Query: 177 LMPSGKRKRDDVPPPFQSGGYIPQQDGAGD 88
            MPSGKRKR+D+   + +GGYIPQQDGAGD
Sbjct: 190 TMPSGKRKRNDLTSQYNAGGYIPQQDGAGD 219



 Score =  110 bits (274), Expect(2) = 7e-51
 Identities = 66/127 (51%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 582
           +++TS VYI VIEDV+ KVRDEF+N+GGPG+ VL ELQ +WE KMMQAGA+LGPI+RS  
Sbjct: 3   ASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERSTA 62

Query: 581 QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 405
            K   GGPI  TPVHDLNV           TAD                     TPL   
Sbjct: 63  AKPTPGGPI--TPVHDLNVPYEGTDEYETPTADML----------------FPPTPLQTP 104

Query: 404 AQTPLPG 384
            QTPLPG
Sbjct: 105 IQTPLPG 111


>ref|XP_003547006.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Glycine max]
          Length = 390

 Score =  114 bits (285), Expect(2) = 5e-50
 Identities = 59/106 (55%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
 Frame = -1

Query: 357 NENGGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFF 178
           N+ GG    K    RP+ YM P S W++QRP LDVNVAYVEGR+E DKG +N   TQDFF
Sbjct: 132 NDTGGNADGKGA--RPAPYMQPSSPWMNQRPPLDVNVAYVEGRDEADKGTSNQPLTQDFF 189

Query: 177 LMPSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSEV--LKVGPGSIS 46
              SGKRKR+D+   +  GGYIPQQDGAGD    V  ++V  G IS
Sbjct: 190 TRTSGKRKRNDLTSQYNVGGYIPQQDGAGDAAHGVFEIEVSGGGIS 235



 Score =  111 bits (277), Expect(2) = 5e-50
 Identities = 66/127 (51%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 582
           +++TS VYI VIEDV+ KVRDEF+N+GGPG+ VL ELQ +WE KMMQAGA+LGPI+RS+ 
Sbjct: 3   ASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERSSA 62

Query: 581 QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 405
            K   GGPI  TPVHDLNV           TAD                     TPL   
Sbjct: 63  AKATPGGPI--TPVHDLNVPYEGTEEYETPTADML----------------FPPTPLQTP 104

Query: 404 AQTPLPG 384
            QTPLPG
Sbjct: 105 IQTPLPG 111


>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
           gi|508786697|gb|EOY33953.1| Transcription initiation
           factor IIA subunit 1 [Theobroma cacao]
          Length = 393

 Score =  119 bits (298), Expect(2) = 6e-50
 Identities = 70/129 (54%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSA- 585
           S++TS VYIHVIEDVINKVRDEFIN+GGPG+ VL ELQG+WE+KMMQAG + GPI+RS+ 
Sbjct: 3   SSTTSAVYIHVIEDVINKVRDEFINNGGPGETVLNELQGIWEMKMMQAGVVCGPIERSSG 62

Query: 584 -KQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPG 408
            KQ   GGPI  TPVHDLNV           TAD                     TPL  
Sbjct: 63  QKQPTPGGPI--TPVHDLNVPYEGPEEYETPTADML----------------FPPTPLQT 104

Query: 407 TAQTPLPGN 381
              TPLPG+
Sbjct: 105 PVPTPLPGS 113



 Score =  105 bits (263), Expect(2) = 6e-50
 Identities = 58/111 (52%), Positives = 70/111 (63%), Gaps = 3/111 (2%)
 Frame = -1

Query: 345 GEGQIKAGAGRPSQYMHPPSSWLSQRP--SLDVNVAYVEGREEGDKGGANHTGTQDFFLM 172
           G G   A   RPS YM  PS W +QR   S+DVNVAYVEGR+E D+G ++   TQDFF+M
Sbjct: 135 GGGNTDAKGARPSPYMQSPSPWPNQRTPLSVDVNVAYVEGRDEVDRGPSHQPLTQDFFMM 194

Query: 171 PSGKRKRDDVPPPFQS-GGYIPQQDGAGDVLSEVLKVGPGSISKMPDQEGS 22
            SGKRKR+D    + + GGYIPQQDGAGD + EV K      S   D+  S
Sbjct: 195 SSGKRKREDFTTQYHNGGGYIPQQDGAGDAIYEVAKAEGSKGSDFLDRRDS 245


>ref|XP_006369541.1| hypothetical protein POPTR_0001s25120g [Populus trichocarpa]
           gi|550348133|gb|ERP66110.1| hypothetical protein
           POPTR_0001s25120g [Populus trichocarpa]
          Length = 455

 Score =  119 bits (298), Expect(2) = 1e-49
 Identities = 75/133 (56%), Positives = 85/133 (63%), Gaps = 2/133 (1%)
 Frame = -2

Query: 773 MASTSTSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPID 594
           MAS++TST  VY  VIEDVI+KVRDEFIN+GGPG+ VL+ELQGLWE K+MQAG + GPI 
Sbjct: 1   MASSATST--VYTEVIEDVIDKVRDEFINNGGPGETVLSELQGLWEKKLMQAGVLSGPIV 58

Query: 593 RSA--KQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQT 420
           RS+  KQ   GG    TPVHDLNV           TA+                PG AQT
Sbjct: 59  RSSANKQLVPGG---LTPVHDLNVPYEGTEEYETPTAE--------ILFPPTPLPGSAQT 107

Query: 419 PLPGTAQTPLPGN 381
           PLPG  QTPLPGN
Sbjct: 108 PLPGNVQTPLPGN 120



 Score =  104 bits (260), Expect(2) = 1e-49
 Identities = 59/114 (51%), Positives = 73/114 (64%), Gaps = 12/114 (10%)
 Frame = -1

Query: 357 NENGGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNV------------AYVEGREEGDK 214
           ++ GG   +KAG  RPS +M  PS  + QRP LDVNV            AYVEGR+E D+
Sbjct: 150 SDAGGSTDVKAG--RPSHFMQSPSPLMHQRPPLDVNVGKVLTNKCCAFVAYVEGRDEVDR 207

Query: 213 GGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKVGPGS 52
           GG++ T TQDFF M SGKRKR D  P + +GG+IPQQDGA D  SEV +V  G+
Sbjct: 208 GGSHQTLTQDFF-MSSGKRKRGDFAPKYNNGGFIPQQDGAVDSASEVSQVSQGN 260


>ref|XP_003537974.1| PREDICTED: transcription initiation factor IIA large subunit-like
           isoform X1 [Glycine max]
          Length = 392

 Score =  111 bits (278), Expect(2) = 4e-49
 Identities = 67/138 (48%), Positives = 83/138 (60%), Gaps = 19/138 (13%)
 Frame = -1

Query: 357 NENGGEGQIKAGAGRPSQYMHPPSS-WLSQ------RPSLDVNVAYVEGREEGDKGGANH 199
           NE G   +IK G  RP  YM PP S W +Q      R  LDVNVAYVEGR+E ++G +N 
Sbjct: 132 NEPGANNEIKGG--RPGPYMQPPPSPWTNQNQNQNQRAPLDVNVAYVEGRDEAERGASNQ 189

Query: 198 TGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKV---GPG--------- 55
             TQDFF M SGKRKRD++   + +GGYIPQQDGAGD  S++L++   G G         
Sbjct: 190 PLTQDFF-MSSGKRKRDEIASQYNAGGYIPQQDGAGDAASQILEIEVYGGGMSIDAGHST 248

Query: 54  SISKMPDQEGSLSCRIPQ 1
           S  KMP Q    + +IPQ
Sbjct: 249 SKGKMPAQSDRPASQIPQ 266



 Score =  110 bits (276), Expect(2) = 4e-49
 Identities = 65/127 (51%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 582
           +++TS VYI VI+DV+NKVRDEF+N+GGPGD VL ELQ +WE KMMQAGAI+GPI+RS  
Sbjct: 3   ASTTSQVYIQVIDDVMNKVRDEFVNNGGPGDEVLKELQSIWESKMMQAGAIVGPIERSGA 62

Query: 581 QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 405
            K   GGPI  TPVHDLN+           TA+                     TPL   
Sbjct: 63  PKPTPGGPI--TPVHDLNMPYEGTEEYETPTAEML----------------FPPTPLQTP 104

Query: 404 AQTPLPG 384
            QTPLPG
Sbjct: 105 LQTPLPG 111


>ref|XP_002298340.1| transcription factor IIA large subunit family protein [Populus
           trichocarpa] gi|222845598|gb|EEE83145.1| transcription
           factor IIA large subunit family protein [Populus
           trichocarpa]
          Length = 409

 Score =  119 bits (298), Expect(2) = 6e-49
 Identities = 75/133 (56%), Positives = 85/133 (63%), Gaps = 2/133 (1%)
 Frame = -2

Query: 773 MASTSTSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPID 594
           MAS++TST  VY  VIEDVI+KVRDEFIN+GGPG+ VL+ELQGLWE K+MQAG + GPI 
Sbjct: 1   MASSATST--VYTEVIEDVIDKVRDEFINNGGPGETVLSELQGLWEKKLMQAGVLSGPIV 58

Query: 593 RSA--KQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQT 420
           RS+  KQ   GG    TPVHDLNV           TA+                PG AQT
Sbjct: 59  RSSANKQLVPGG---LTPVHDLNVPYEGTEEYETPTAE--------ILFPPTPLPGSAQT 107

Query: 419 PLPGTAQTPLPGN 381
           PLPG  QTPLPGN
Sbjct: 108 PLPGNVQTPLPGN 120



 Score =  102 bits (254), Expect(2) = 6e-49
 Identities = 58/110 (52%), Positives = 71/110 (64%), Gaps = 12/110 (10%)
 Frame = -1

Query: 357 NENGGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNV------------AYVEGREEGDK 214
           ++ GG   +KAG  RPS +M  PS  + QRP LDVNV            AYVEGR+E D+
Sbjct: 150 SDAGGSTDVKAG--RPSHFMQSPSPLMHQRPPLDVNVGKVLTNKCCAFVAYVEGRDEVDR 207

Query: 213 GGANHTGTQDFFLMPSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKV 64
           GG++ T TQDFF M SGKRKR D  P + +GG+IPQQDGA D  SEV +V
Sbjct: 208 GGSHQTLTQDFF-MSSGKRKRGDFAPKYNNGGFIPQQDGAVDSASEVSQV 256


>ref|XP_004143132.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Cucumis sativus] gi|449496658|ref|XP_004160191.1|
           PREDICTED: transcription initiation factor IIA large
           subunit-like [Cucumis sativus]
          Length = 402

 Score =  112 bits (281), Expect(2) = 8e-49
 Identities = 68/127 (53%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSAK 582
           +TSTS++YI+VIEDVINK+RDEF+ D GPG+ VL ELQG+WE KMMQAGA+ GPI+RSA 
Sbjct: 2   ATSTSSIYINVIEDVINKLRDEFV-DNGPGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 581 QKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPGT 405
            K   GGPI  TPVHDLNV           TAD                     TPL   
Sbjct: 61  SKPTPGGPI--TPVHDLNVPYEGTEEYETPTADLL----------------FPPTPLQTP 102

Query: 404 AQTPLPG 384
            QTPLPG
Sbjct: 103 IQTPLPG 109



 Score =  108 bits (270), Expect(2) = 8e-49
 Identities = 54/113 (47%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
 Frame = -1

Query: 345 GEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREEG-DKG--GANHTGTQDFFL 175
           G   ++  +GRP+ YM PPS W+ QR  +DVN+AYVEGREE  D+G  GA+ + TQDFF+
Sbjct: 143 GNNNVEVRSGRPTPYMQPPS-WMGQRTPVDVNIAYVEGREEAADRGAAGAHPSLTQDFFM 201

Query: 174 MPSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSEVLKVGPGSISKMPDQEGSLS 16
           M SGKRKRDD    +Q+ G+IPQQDGAGD  + V ++     +    + G+++
Sbjct: 202 MNSGKRKRDDFASQYQANGFIPQQDGAGDAANSVFEIEISGCNSSDGRPGAIT 254


>ref|XP_003597404.1| Transcription factor/ transcription initiation factor [Medicago
           truncatula] gi|355486452|gb|AES67655.1| Transcription
           factor/ transcription initiation factor [Medicago
           truncatula] gi|388523053|gb|AFK49588.1| unknown
           [Medicago truncatula]
          Length = 388

 Score =  125 bits (314), Expect(2) = 8e-49
 Identities = 69/133 (51%), Positives = 85/133 (63%), Gaps = 14/133 (10%)
 Frame = -1

Query: 357 NENGGEGQIKAGAGRPSQYMHPPSSWLS--QRPSLDVNVAYVEGREEGDKGGANHTGTQD 184
           N+ GG   +K G      +M PPS W++  QRP LDVNVAYVEGR+E D+G +N   TQD
Sbjct: 133 NDAGGNADVKGGR---QAFMPPPSPWMNMNQRPPLDVNVAYVEGRDEADRGASNQPMTQD 189

Query: 183 FFLMPSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSE--VLKVGPGSIS----------KM 40
           FF M  GKRKR+D+PPP+ +GGYIPQQDGAGD +S    ++V  GSIS          KM
Sbjct: 190 FFTMTGGKRKRNDLPPPYDAGGYIPQQDGAGDAVSGDFEIEVCGGSISFNSQHTNSKGKM 249

Query: 39  PDQEGSLSCRIPQ 1
           P     L+ RIPQ
Sbjct: 250 PADLERLASRIPQ 262



 Score = 95.9 bits (237), Expect(2) = 8e-49
 Identities = 60/126 (47%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
 Frame = -2

Query: 761 STSTSNVYIHVIEDVINKVRDEFINDGG-PGDGVLAELQGLWELKMMQAGAILGPIDRS- 588
           +++TS VYI VIEDV+ KVRDEF+N G  PGD VL ELQ +WE K +QAGA+LGPI+R+ 
Sbjct: 3   ASTTSQVYIDVIEDVMVKVRDEFVNTGASPGDEVLRELQAIWESKCIQAGAVLGPIERNT 62

Query: 587 -AKQKGAGGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLP 411
              +   GGPI  TPVHDLNV           TA+                    QTPLP
Sbjct: 63  GVNRPMPGGPI--TPVHDLNVPYEGTEEYETPTAEILFPPTPLQTP--------IQTPLP 112

Query: 410 GTAQTP 393
           G  +TP
Sbjct: 113 GPGETP 118


>ref|NP_850937.1| transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana]
           gi|30680153|ref|NP_172228.3| transcription factor IIA,
           alpha/beta subunit [Arabidopsis thaliana]
           gi|2826884|emb|CAA11525.1| transcription factor IIA
           large subunit [Arabidopsis thaliana]
           gi|39545932|gb|AAR28029.1| TFIIA-L1 [Arabidopsis
           thaliana] gi|222423282|dbj|BAH19617.1| AT1G07480
           [Arabidopsis thaliana] gi|225897890|dbj|BAH30277.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332190011|gb|AEE28132.1| transcription factor IIA,
           alpha/beta subunit [Arabidopsis thaliana]
           gi|332190012|gb|AEE28133.1| transcription factor IIA,
           alpha/beta subunit [Arabidopsis thaliana]
          Length = 375

 Score =  113 bits (282), Expect(2) = 2e-47
 Identities = 67/128 (52%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
 Frame = -2

Query: 764 TSTSTSNVYIHVIEDVINKVRDEFINDGGPGDGVLAELQGLWELKMMQAGAILGPIDRSA 585
           T+T+TS VYIHVIEDV+NKVR+EFIN+GGPG+ VL+ELQG+WE KMMQAG + GPI+RS+
Sbjct: 3   TTTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIERSS 62

Query: 584 KQKGA-GGPITPTPVHDLNVXXXXXXXXXXXTADXXXXXXXXXXXXXXXXPGMAQTPLPG 408
            QK   GGP+T    HDLNV           TA+                    QTPLP 
Sbjct: 63  AQKPTPGGPLT----HDLNVPYEGTEEYETPTAEMLFPPTP------------LQTPLP- 105

Query: 407 TAQTPLPG 384
              TPLPG
Sbjct: 106 ---TPLPG 110



 Score =  103 bits (258), Expect(2) = 2e-47
 Identities = 60/124 (48%), Positives = 75/124 (60%), Gaps = 6/124 (4%)
 Frame = -1

Query: 354 ENGGEGQIKAGAGRPSQYMHPPSSWLSQRPSLDVNVAYVEGREEGDKGGANHTGTQDFFL 175
           ENG    +KA   RPS YM PPS W +  P LDVNVAYV+GR+E ++G +N   TQD F+
Sbjct: 133 ENGVNIDVKA---RPSPYMPPPSPWTN--PRLDVNVAYVDGRDEPERGNSNQQFTQDLFV 187

Query: 174 MPSGKRKRDDVPPPFQSGGYIPQQDGAGDVLSE------VLKVGPGSISKMPDQEGSLSC 13
             SGKRKRDD    +Q+GG IPQQDGAGD + E        ++      K+P    S S 
Sbjct: 188 PSSGKRKRDDSSGHYQNGGSIPQQDGAGDAIPEANFECDAFRITSIGDRKVPRDFFSSSS 247

Query: 12  RIPQ 1
           +IPQ
Sbjct: 248 KIPQ 251