BLASTX nr result

ID: Mentha24_contig00007140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00007140
         (368 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU19455.1| hypothetical protein MIMGU_mgv1a013552mg [Mimulus...    77   2e-12
ref|XP_004245816.1| PREDICTED: 50S ribosomal protein L19, chloro...    69   5e-10
ref|XP_006359224.1| PREDICTED: 50S ribosomal protein L19-2, chlo...    69   7e-10
ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloro...    67   3e-09
gb|EPS64996.1| hypothetical protein M569_09783 [Genlisea aurea]        56   5e-06

>gb|EYU19455.1| hypothetical protein MIMGU_mgv1a013552mg [Mimulus guttatus]
          Length = 217

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
 Frame = +1

Query: 40  MSSNILPQMLFMVPKCSAHCQPRNLAFSAAVSRRHSA-GGLASRVLMQPSGFNFN----N 204
           M+S+ L Q LFMVP+ +  C+  NLAFSAAVSRR    GGL SRV     GF+ +    N
Sbjct: 1   MASSFLHQALFMVPRSTFECRSNNLAFSAAVSRRRPCPGGLVSRVPTSSYGFSLSERGKN 60

Query: 205 LSFSVRA--EANPEADVVLXXXXXXXXXXXXLVFSDDKPAYKPRTKLGDVMGILNK 366
            SF V+A  E+N E +V +             V     P   PRTKLGD+MGILNK
Sbjct: 61  WSFVVKAEEESNAEVEVEIEEGGDNVEAEEAEVL----PRAPPRTKLGDIMGILNK 112


>ref|XP_004245816.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Solanum
           lycopersicum]
          Length = 214

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
 Frame = +1

Query: 40  MSSNILPQMLFMVPKCSAHCQ-PRNLAFSAAVSRRHSAGGLASRVLMQPSGF---NFNNL 207
           M S +LPQ LF+VP+    C  P+ LAFSA VSRR S   +    L   SG     + N 
Sbjct: 1   MGSVVLPQALFVVPRNPTRCTAPQKLAFSACVSRRPSQFNVP---LFSASGLLSSKWENR 57

Query: 208 SFSVRAEANPEADVVLXXXXXXXXXXXXLVFSDDKPAYKPRTKLGDVMGILNK 366
           SF VRAEA  + +                V ++++P +KPR KLGD+MGILNK
Sbjct: 58  SFIVRAEAESQEEPEAAEAEVEAEADAA-VATEERPPFKPRAKLGDIMGILNK 109


>ref|XP_006359224.1| PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like [Solanum
           tuberosum]
          Length = 222

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
 Frame = +1

Query: 40  MSSNILPQMLFMVPKCSAHCQ-PRNLAFSAAVSRRHSAGGL----ASRVLMQPSGFNFNN 204
           M S +LPQ LF+VP+    C  P+ LAFSA VSRR S   +    ASR+L    G    +
Sbjct: 1   MGSIVLPQALFVVPRNPTRCTTPQKLAFSACVSRRPSQLNVSLFSASRLLSSKWG----S 56

Query: 205 LSFSVRAEAN----PEA---DVVLXXXXXXXXXXXXLVFSDDKPAYKPRTKLGDVMGILN 363
            SF VRAEA+    PEA   +                V ++++P +KPR KLGD+MGILN
Sbjct: 57  RSFVVRAEADSQGEPEATETEAPAETEVEAEAEAAVAVATEERPPFKPRAKLGDIMGILN 116

Query: 364 K 366
           K
Sbjct: 117 K 117


>ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus] gi|449523724|ref|XP_004168873.1| PREDICTED: 50S
           ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 221

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 51/122 (41%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
 Frame = +1

Query: 40  MSSNILPQMLFMVPKCSAHCQPRNLAFSAAVS-RRHSAGGLASRVLMQPSGFNFNNL--- 207
           M+S ILPQ +  +P+    C PR L F +AVS  R S   L+S  +    G +F++    
Sbjct: 1   MASKILPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSI----GSHFHHTVAA 56

Query: 208 ----SFSVRAEANPEADVVLXXXXXXXXXXXXLVFSD-----DKPAYKPRTKLGDVMGIL 360
               +F VRAEANPEAD                V SD     +KP+ KPR KLGDVMGIL
Sbjct: 57  PLRRAFVVRAEANPEADSAAEEAPEAEVEAA--VESDAQPEEEKPSRKPRVKLGDVMGIL 114

Query: 361 NK 366
           NK
Sbjct: 115 NK 116


>gb|EPS64996.1| hypothetical protein M569_09783 [Genlisea aurea]
          Length = 135

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
 Frame = +1

Query: 40  MSSNILPQMLFMVPKCSAHCQPRNLAFSAAVSRRHSAGGLASRVLMQPSGFNFNNLS--- 210
           M+SN LP M        A C P+N+AF +AVSRR   G L S VL  P+   +++     
Sbjct: 1   MASNGLPLMQMPFITVPAQCSPKNMAFCSAVSRRSYFGNLVSSVLPTPANGAYSSSERSS 60

Query: 211 ---FSVRAEANPEADVVL------XXXXXXXXXXXXLVFSDDKPAYKPRTKLGDVMG 354
              +S+RAE   ++ V                    ++ +++KP  +PR KLGD+MG
Sbjct: 61  RGFYSIRAEVAADSVVETKQSEEENVSPSDSDEAAGVLTAEEKPPRRPRIKLGDIMG 117


Top