BLASTX nr result
ID: Mentha24_contig00007116
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00007116
(559 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus... 295 5e-78
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 254 8e-66
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The... 248 8e-64
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 246 3e-63
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 246 3e-63
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 242 4e-62
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 241 9e-62
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 236 2e-60
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 236 2e-60
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 235 5e-60
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 235 5e-60
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun... 231 7e-59
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 229 5e-58
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha... 227 2e-57
gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana] 227 2e-57
ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Caps... 226 2e-57
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 226 3e-57
ref|XP_007161319.1| hypothetical protein PHAVU_001G059800g [Phas... 224 9e-57
emb|CAD20832.1| sigma factor [Spinacia oleracea] 224 1e-56
ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutr... 223 3e-56
>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus guttatus]
Length = 478
Score = 295 bits (755), Expect = 5e-78
Identities = 144/186 (77%), Positives = 166/186 (89%), Gaps = 1/186 (0%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLGV+FEDLIQAG +GVLQGAERFDQ+R YKFSTYVQYW+RKSMSTLVA+H+RG+RI
Sbjct: 257 NYSGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVAKHARGVRI 316
Query: 378 PSTLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIG 199
P TLSK +NQVHKARKAL SNG YPDD +IAKFTGLSVAK++SASKCLRVVGSIDQKIG
Sbjct: 317 PCTLSKVINQVHKARKALTTSNGKYPDDYEIAKFTGLSVAKVMSASKCLRVVGSIDQKIG 376
Query: 198 DF-NTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKS 22
++ TKYMEI+ DT +PEEAV RQHM+ D+ T L+GL+ RE++VIILRFGLGNCQCKS
Sbjct: 377 EYMTTKYMEILSDTSMPSPEEAVIRQHMLNDVSTLLNGLEPREKQVIILRFGLGNCQCKS 436
Query: 21 LEEIGK 4
LEEIG+
Sbjct: 437 LEEIGR 442
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 254 bits (650), Expect = 8e-66
Identities = 126/186 (67%), Positives = 154/186 (82%), Gaps = 1/186 (0%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY G G++ EDL+QAG +GVL+GAERFD TR Y+FSTYVQYW+RKSMS +V+R +RGI+I
Sbjct: 340 NYRGTGIALEDLLQAGNLGVLEGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQI 399
Query: 378 PSTLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIG 199
P TLS+A+ Q+ KARKAL SNG YPDD +IAK+TGLS+AKI SAS+CLRVVGSIDQKIG
Sbjct: 400 PCTLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIG 459
Query: 198 D-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKS 22
+ N KY+E +PDT +PEE V RQHMI+DM+ L LDSRER+V+ILRFGL + Q KS
Sbjct: 460 ESLNAKYLEFLPDTSVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKS 519
Query: 21 LEEIGK 4
LEEIG+
Sbjct: 520 LEEIGR 525
>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
C, putative [Theobroma cacao]
Length = 848
Score = 248 bits (633), Expect = 8e-64
Identities = 121/186 (65%), Positives = 154/186 (82%), Gaps = 1/186 (0%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLG++ EDLIQAG +GVLQGAERFD TR Y+FSTYVQ+W+RKS+S +VARH+RGI++
Sbjct: 628 NYRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQV 687
Query: 378 PSTLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIG 199
P TLS+A+ Q+ KARKAL +S+G YPD+ IAKFTGLS+AKI SA+KC+RVVGSIDQKIG
Sbjct: 688 PCTLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIG 747
Query: 198 D-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKS 22
D N KY+E IPD +PE+ V RQHM +D++ L+GLD+RER+V++LR+GL KS
Sbjct: 748 DCMNAKYLEFIPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKS 807
Query: 21 LEEIGK 4
LEEIG+
Sbjct: 808 LEEIGR 813
>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
Length = 534
Score = 246 bits (628), Expect = 3e-63
Identities = 119/186 (63%), Positives = 152/186 (81%), Gaps = 1/186 (0%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLG+ F DL+QAG VGVLQGAERFD TR YKFSTYVQYW+RKS+S +VARH+RGI+I
Sbjct: 314 NYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKI 373
Query: 378 PSTLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIG 199
P L++ ++++ KARKAL S+G YP+D +IAK+TGLS+A+I SAS+CLR+VGSIDQKIG
Sbjct: 374 PCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIG 433
Query: 198 D-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKS 22
D N KY+E PD +P+E V RQHM KD++ L+ LDSRER+V++LR+GL + + KS
Sbjct: 434 DCLNAKYLEFAPDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKS 493
Query: 21 LEEIGK 4
LEEIGK
Sbjct: 494 LEEIGK 499
>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553989|gb|ESR64003.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 534
Score = 246 bits (628), Expect = 3e-63
Identities = 119/186 (63%), Positives = 152/186 (81%), Gaps = 1/186 (0%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLG+ F DL+QAG VGVLQGAERFD TR YKFSTYVQYW+RKS+S +VARH+RGI+I
Sbjct: 314 NYRGLGIPFSDLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKI 373
Query: 378 PSTLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIG 199
P L++ ++++ KARKAL S+G YP+D +IAK+TGLS+A+I SAS+CLR+VGSIDQKIG
Sbjct: 374 PCKLNREISKIQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIG 433
Query: 198 D-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKS 22
D N KY+E PD +P+E V RQHM KD++ L+ LDSRER+V++LR+GL + + KS
Sbjct: 434 DCLNAKYLEFAPDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKS 493
Query: 21 LEEIGK 4
LEEIGK
Sbjct: 494 LEEIGK 499
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
lycopersicum]
Length = 551
Score = 242 bits (618), Expect = 4e-62
Identities = 120/186 (64%), Positives = 146/186 (78%), Gaps = 1/186 (0%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLGV+FEDLIQAG +GVLQGA RFD TR YKFSTYVQYW+RKS+S LVA+H+RG+RI
Sbjct: 332 NYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRI 391
Query: 378 PSTLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIG 199
P T+ K +NQ+HKARK L RS+G +P D +IAKFTGLS A+I ASKCLRVVGSIDQK+G
Sbjct: 392 PFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVG 451
Query: 198 D-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKS 22
D N K +E+ PD +PEE V RQ ++ +MY L+ LD +E++VI RFGL Q KS
Sbjct: 452 DCINAKVLELTPDKSVTSPEEFVMRQDIVDNMYALLESLDPKEQQVIYFRFGLETHQRKS 511
Query: 21 LEEIGK 4
LEEIG+
Sbjct: 512 LEEIGR 517
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
tuberosum]
Length = 555
Score = 241 bits (615), Expect = 9e-62
Identities = 119/186 (63%), Positives = 147/186 (79%), Gaps = 1/186 (0%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLGV+FEDLIQAG +GVLQGA RFD TR YKFSTYVQYW+RKS+S LVA+H+RG+RI
Sbjct: 336 NYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRI 395
Query: 378 PSTLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIG 199
P T+ K +NQ+HKARK L RS+G +P D +IAKFTGLS A+I ASKCLRVVGSIDQK+G
Sbjct: 396 PFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVG 455
Query: 198 D-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKS 22
D + K +E+ PD +PEE V RQ ++ +MY+ L+ LD +E++VI RFGL Q KS
Sbjct: 456 DCISAKVLELTPDKSITSPEETVMRQDIVDNMYSLLESLDPKEQQVIYFRFGLETHQRKS 515
Query: 21 LEEIGK 4
LEEIG+
Sbjct: 516 LEEIGR 521
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
subsp. vesca]
Length = 545
Score = 236 bits (603), Expect = 2e-60
Identities = 117/186 (62%), Positives = 149/186 (80%), Gaps = 1/186 (0%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLGV+ +DL+QAG +G+LQGAERFD +R Y+FSTYVQYW+RKSMS LVA+H+RGI+I
Sbjct: 324 NYRGLGVALDDLLQAGNLGLLQGAERFDPSRGYRFSTYVQYWIRKSMSRLVAQHARGIKI 383
Query: 378 PSTLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIG 199
P+TLSKA+N++ KARKA S+ YPDD +IAK TGLS+AKI SAS+CLRVVGS+D KI
Sbjct: 384 PNTLSKAINRIQKARKANYNSHMKYPDDEEIAKITGLSLAKISSASRCLRVVGSVDHKIW 443
Query: 198 DFNT-KYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKS 22
+ + YME PD TPEE+V RQHM D++ L+GL+SRE++V+ LR+GL C KS
Sbjct: 444 ECSAGTYMEFTPDIAVETPEESVMRQHMKNDIHVLLEGLNSREKKVLALRYGLNYCNPKS 503
Query: 21 LEEIGK 4
LEEIG+
Sbjct: 504 LEEIGR 509
>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
gi|222854562|gb|EEE92109.1| hypothetical protein
POPTR_0006s25090g [Populus trichocarpa]
Length = 559
Score = 236 bits (603), Expect = 2e-60
Identities = 116/186 (62%), Positives = 148/186 (79%), Gaps = 1/186 (0%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY G+G++ EDLIQAG +G+LQGAERFD TR Y+FSTYVQYW+RKSM +V RH+RGI+I
Sbjct: 339 NYRGMGIAMEDLIQAGNLGLLQGAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQI 398
Query: 378 PSTLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIG 199
P LS+++N++ KARKAL S+G YPDD ++AKFTGLS+AKI SA KCLRVV S+DQKIG
Sbjct: 399 PYALSRSINKIQKARKALSNSHGRYPDDWEVAKFTGLSLAKIESAQKCLRVVASLDQKIG 458
Query: 198 DFN-TKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKS 22
+ + KY E IPD PEEAV RQHM +++Y L GLDSRE++V++LR+G + Q KS
Sbjct: 459 EGHYAKYSEFIPDMSIQNPEEAVMRQHMREEIYDLLRGLDSREKQVMVLRYGFKDNQPKS 518
Query: 21 LEEIGK 4
L EIG+
Sbjct: 519 LAEIGR 524
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 235 bits (600), Expect = 5e-60
Identities = 115/187 (61%), Positives = 146/187 (78%), Gaps = 1/187 (0%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY G+GV+FED++QAG +GVLQGAERFD T+ Y+FSTYVQYW+RKSMSTLVARH+RG++I
Sbjct: 341 NYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKI 400
Query: 378 PSTLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIG 199
P TL++A+ Q+ KARKAL +S+G YPDD +IAKFTGLS+AKI SA CLRVVGS DQ
Sbjct: 401 PFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQ 460
Query: 198 D-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKS 22
D + +E PDT +PEE +Q KD++ L GLD RER++++LR+G G Q KS
Sbjct: 461 DCWGATILEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKS 520
Query: 21 LEEIGKR 1
LEEIG+R
Sbjct: 521 LEEIGRR 527
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 235 bits (600), Expect = 5e-60
Identities = 115/187 (61%), Positives = 146/187 (78%), Gaps = 1/187 (0%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY G+GV+FED++QAG +GVLQGAERFD T+ Y+FSTYVQYW+RKSMSTLVARH+RG++I
Sbjct: 391 NYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKI 450
Query: 378 PSTLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIG 199
P TL++A+ Q+ KARKAL +S+G YPDD +IAKFTGLS+AKI SA CLRVVGS DQ
Sbjct: 451 PFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQ 510
Query: 198 D-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKS 22
D + +E PDT +PEE +Q KD++ L GLD RER++++LR+G G Q KS
Sbjct: 511 DCWGATILEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKS 570
Query: 21 LEEIGKR 1
LEEIG+R
Sbjct: 571 LEEIGRR 577
>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
gi|462419859|gb|EMJ24122.1| hypothetical protein
PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 231 bits (590), Expect = 7e-59
Identities = 116/186 (62%), Positives = 147/186 (79%), Gaps = 1/186 (0%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLGV+ +DL+QAG +G+LQGAERFD +R Y+FSTYVQYW+RKSMS LVA+H+RG++I
Sbjct: 335 NYRGLGVALDDLMQAGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQI 394
Query: 378 PSTLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIG 199
P TLSKA+NQ+ KARKA S+ YPDD +IAK TGLS+A+I SAS CLRVVGS+D K+
Sbjct: 395 PFTLSKAINQIQKARKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMW 454
Query: 198 DFNT-KYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKS 22
+ + YME PDT +PEE V RQHM KD++ L GL+ RER+V++LR+GL N KS
Sbjct: 455 ESSDGTYMEFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKS 514
Query: 21 LEEIGK 4
LEEIG+
Sbjct: 515 LEEIGR 520
>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323785|gb|EFH54206.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 568
Score = 229 bits (583), Expect = 5e-58
Identities = 113/187 (60%), Positives = 150/187 (80%), Gaps = 2/187 (1%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLG++ EDLIQAG VGVLQGAERFD TR YKFSTYVQYW+RKSMS +V+RH+RG+ I
Sbjct: 347 NYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVHI 406
Query: 378 PSTLSKAVNQVHKARKALRRSNG-TYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKI 202
PS++ + +NQ+ KARK L+ S+G YP D I+K T LSV KI +A++CL+VVGSI++K+
Sbjct: 407 PSSIIRTINQIQKARKTLKTSHGIKYPADEDISKLTSLSVKKIRAANQCLKVVGSIEKKV 466
Query: 201 GD-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCK 25
GD F+TK++E PDT +PEEAV RQ +D++ L+GL+ RE++V++LR+GL N + K
Sbjct: 467 GDCFSTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQNYRPK 526
Query: 24 SLEEIGK 4
SLEEIGK
Sbjct: 527 SLEEIGK 533
>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
polymerase sigma factor sigC; Short=Sigma factor C;
Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
[Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
[Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
factor SigC [Arabidopsis thaliana]
gi|7630012|emb|CAB88354.1| sigma factor SigC
[Arabidopsis thaliana] gi|133778870|gb|ABO38775.1|
At3g53920 [Arabidopsis thaliana]
gi|332645638|gb|AEE79159.1| RNApolymerase sigma-subunit
C [Arabidopsis thaliana]
Length = 571
Score = 227 bits (578), Expect = 2e-57
Identities = 113/187 (60%), Positives = 149/187 (79%), Gaps = 2/187 (1%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLG++ EDLIQAG VGVLQGAERFD TR YKFSTYVQYW+RKSMST+V+RH+RG+ I
Sbjct: 350 NYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHI 409
Query: 378 PSTLSKAVNQVHKARKALRRSNG-TYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKI 202
PS++ + +N + KARK L+ S+G Y D +IAK TG SV KI +A++CL+VVGSID+K+
Sbjct: 410 PSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKV 469
Query: 201 GD-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCK 25
GD F TK++E PDT +PEEAV RQ +D++ L+GL+ RE++V++LR+GL + + K
Sbjct: 470 GDCFTTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPK 529
Query: 24 SLEEIGK 4
SLEEIGK
Sbjct: 530 SLEEIGK 536
>gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana]
Length = 291
Score = 227 bits (578), Expect = 2e-57
Identities = 113/187 (60%), Positives = 149/187 (79%), Gaps = 2/187 (1%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLG++ EDLIQAG VGVLQGAERFD TR YKFSTYVQYW+RKSMST+V+RH+RG+ I
Sbjct: 70 NYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHI 129
Query: 378 PSTLSKAVNQVHKARKALRRSNG-TYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKI 202
PS++ + +N + KARK L+ S+G Y D +IAK TG SV KI +A++CL+VVGSID+K+
Sbjct: 130 PSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKV 189
Query: 201 GD-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCK 25
GD F TK++E PDT +PEEAV RQ +D++ L+GL+ RE++V++LR+GL + + K
Sbjct: 190 GDCFTTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPK 249
Query: 24 SLEEIGK 4
SLEEIGK
Sbjct: 250 SLEEIGK 256
>ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Capsella rubella]
gi|482559522|gb|EOA23713.1| hypothetical protein
CARUB_v10016920mg [Capsella rubella]
Length = 581
Score = 226 bits (577), Expect = 2e-57
Identities = 111/187 (59%), Positives = 150/187 (80%), Gaps = 2/187 (1%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLG++ EDLIQAG VGVLQGAERFD R YKFSTYVQYW+RKSMS +V+RH+RG+ I
Sbjct: 360 NYRGLGIAHEDLIQAGFVGVLQGAERFDHARGYKFSTYVQYWIRKSMSMMVSRHARGVHI 419
Query: 378 PSTLSKAVNQVHKARKALRRSNG-TYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKI 202
PS++ + +NQ+ KARK L+ S+G YP D +I+K T LSV KI +A++CL+VVGSI+ K+
Sbjct: 420 PSSIIRTINQIQKARKTLKTSHGIKYPADEEISKLTSLSVKKIRAANQCLKVVGSIENKV 479
Query: 201 GD-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCK 25
GD F+TK++E PDT+ +PEEAV RQ +D++ L+GL+ RE++V++LR+GL + + K
Sbjct: 480 GDCFSTKFLEFTPDTMMESPEEAVMRQSARRDLHDLLEGLEPREKQVMVLRYGLQDYRPK 539
Query: 24 SLEEIGK 4
SLEEIGK
Sbjct: 540 SLEEIGK 546
>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Length = 571
Score = 226 bits (576), Expect = 3e-57
Identities = 112/187 (59%), Positives = 149/187 (79%), Gaps = 2/187 (1%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY G+G++ EDLIQAG VGVLQGAERFD TR YKFSTYVQYW+RKSMST+V+RH+RG+ I
Sbjct: 350 NYRGMGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHI 409
Query: 378 PSTLSKAVNQVHKARKALRRSNG-TYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKI 202
PS++ + +N + KARK L+ S+G Y D +IAK TG SV KI +A++CL+VVGSID+K+
Sbjct: 410 PSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKV 469
Query: 201 GD-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCK 25
GD F TK++E PDT +PEEAV RQ +D++ L+GL+ RE++V++LR+GL + + K
Sbjct: 470 GDCFTTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPK 529
Query: 24 SLEEIGK 4
SLEEIGK
Sbjct: 530 SLEEIGK 536
>ref|XP_007161319.1| hypothetical protein PHAVU_001G059800g [Phaseolus vulgaris]
gi|561034783|gb|ESW33313.1| hypothetical protein
PHAVU_001G059800g [Phaseolus vulgaris]
Length = 538
Score = 224 bits (572), Expect = 9e-57
Identities = 107/183 (58%), Positives = 145/183 (79%)
Frame = -2
Query: 555 YWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRIP 376
Y G+G++ +DL+QAG VGVLQGAERFD TR YKFSTYVQYW+RKS+ +V R+SRG+ IP
Sbjct: 320 YRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTYVQYWIRKSILRVVERYSRGVIIP 379
Query: 375 STLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIGD 196
+L++A+ Q+ KARK L+ ++ PDDC+IAK TGLS+ KI SAS CLR+V SIDQK+G+
Sbjct: 380 WSLNRAIKQIQKARKVLKSTHKKSPDDCEIAKMTGLSLDKIKSASNCLRIVASIDQKVGN 439
Query: 195 FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKSLE 16
F+ +Y E++PDT +PE V +QHM KD++ L GL+SRER+++ LRFGL + Q KSL+
Sbjct: 440 FSIEYNELLPDTTIESPENGVLKQHMKKDVHDLLKGLNSRERQILSLRFGLIDNQPKSLQ 499
Query: 15 EIG 7
+IG
Sbjct: 500 DIG 502
>emb|CAD20832.1| sigma factor [Spinacia oleracea]
Length = 548
Score = 224 bits (571), Expect = 1e-56
Identities = 109/185 (58%), Positives = 140/185 (75%), Gaps = 1/185 (0%)
Frame = -2
Query: 555 YWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRIP 376
Y GLGV+ EDL+QAG +G+LQGAERFD TR Y+FSTYVQYW+RK+MS LV+RH RGI++P
Sbjct: 330 YRGLGVAHEDLMQAGNIGILQGAERFDHTRGYQFSTYVQYWIRKAMSQLVSRHGRGIKVP 389
Query: 375 STLSKAVNQVHKARKALRRSNGTYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKIGD 196
+TLS +N+V KARK L+RS G +PDD +++K TGLS+ KI SA CLR+VGS+DQK+G
Sbjct: 390 TTLSTTINRVQKARKILKRSQGKHPDDVEVSKSTGLSLDKIKSADNCLRIVGSLDQKVGH 449
Query: 195 F-NTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCKSL 19
F N KY+E PDT PE+ V +QHM D++ L LD +ER V+I R+GL C SL
Sbjct: 450 FINMKYLECTPDTALEMPEKTVMKQHMRNDVHKLLQELDPKERRVLIHRYGLEG-HCMSL 508
Query: 18 EEIGK 4
E+GK
Sbjct: 509 HEVGK 513
>ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutrema salsugineum]
gi|312281919|dbj|BAJ33825.1| unnamed protein product
[Thellungiella halophila] gi|557104759|gb|ESQ45093.1|
hypothetical protein EUTSA_v10010251mg [Eutrema
salsugineum]
Length = 562
Score = 223 bits (567), Expect = 3e-56
Identities = 111/187 (59%), Positives = 148/187 (79%), Gaps = 2/187 (1%)
Frame = -2
Query: 558 NYWGLGVSFEDLIQAGKVGVLQGAERFDQTREYKFSTYVQYWVRKSMSTLVARHSRGIRI 379
NY GLG++ EDLIQAG VGVLQGAERFD TR YKFSTYVQYW+RKSMS +V+RH+RG+ I
Sbjct: 341 NYRGLGIAHEDLIQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVYI 400
Query: 378 PSTLSKAVNQVHKARKALRRSNG-TYPDDCKIAKFTGLSVAKIISASKCLRVVGSIDQKI 202
PS++ + ++Q+ KARK L+ S+G YP D +I+K TG S+ KI +A++CL+VVGSID+K+
Sbjct: 401 PSSVIRTMSQIQKARKTLKTSHGIKYPADEEISKETGYSLKKIRAANQCLKVVGSIDKKV 460
Query: 201 GD-FNTKYMEIIPDTLTATPEEAVFRQHMIKDMYTFLDGLDSREREVIILRFGLGNCQCK 25
GD F TK++E PDT +PEEAV RQ +D++ L GL+ RE++V++LR+GL + K
Sbjct: 461 GDCFTTKFLEFTPDTTMESPEEAVMRQSAWRDVHDLLQGLEPREKQVMVLRYGLQGFRPK 520
Query: 24 SLEEIGK 4
SLEEIGK
Sbjct: 521 SLEEIGK 527