BLASTX nr result
ID: Mentha24_contig00007080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00007080
(1092 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus... 393 e-107
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 343 7e-92
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 339 1e-90
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise... 338 2e-90
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 294 5e-77
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 294 5e-77
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 260 8e-67
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro... 259 1e-66
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro... 259 1e-66
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ... 259 1e-66
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub... 257 5e-66
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun... 257 7e-66
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ... 256 2e-65
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas... 253 1e-64
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 252 2e-64
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 250 8e-64
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana... 249 1e-63
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub... 249 2e-63
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu... 248 4e-63
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub... 246 9e-63
>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
Length = 1719
Score = 393 bits (1010), Expect = e-107
Identities = 210/389 (53%), Positives = 274/389 (70%), Gaps = 26/389 (6%)
Frame = +3
Query: 3 EFVSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXXE-DAEEDNSGAG 179
EFVS +++ +TL+ FL E+E IENH+++LS++SGIKNF +A+ED SG G
Sbjct: 1307 EFVSLENMHETLKTTFLGELEDAIENHVLYLSRLSGIKNFASNPKPKSSNEADEDESGLG 1366
Query: 180 TRXXXXXXXXXXXXXXXXXXXXA------QKRTDEINYGDESDVDHCEDELSADTKKGTS 341
T + Q+ TD+++Y D SD ED+ +D +KG S
Sbjct: 1367 TENAGVNDDDDDDDDDKGDDLGSDVQKRKQQATDDMDYEDGSDGGAAEDD-DSDLEKGKS 1425
Query: 342 DGEDHEDMDTSKDEGAEHSGKEDETNDEQNEYE----------GSTRSKKT--------- 464
D E+ E+ +T KDE +EH+ +DE ++ QNE E GS++ K +
Sbjct: 1426 DVENLEEDETGKDEESEHTDDKDEASNVQNEDEAISEGTKSSVGSSKGKTSFDKSSVELK 1485
Query: 465 NAKPRRAVKHVFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDP 644
K RRA V +G+ FEVHF+F EPH+L+AQ+AQKT++KV++++SG++SQC++V YDP
Sbjct: 1486 GKKIRRAFYMVVKGTKFEVHFEFHEEPHMLIAQLAQKTSKKVYIRKSGKVSQCKMVSYDP 1545
Query: 645 DEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVH 824
DEKTVIW+++ KPKRGE+K + +D YWA+KASG DFKSFW M +DLDL+RLYSNN+H
Sbjct: 1546 DEKTVIWDNSKKPKRGESKSEE--EDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNIH 1603
Query: 825 AVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISES 1004
A+L TYGVEAARAT+IREVK VFDIYGVKIDYRHLSLIAD+MTHTG Y PM+RHGSISES
Sbjct: 1604 AMLTTYGVEAARATIIREVKHVFDIYGVKIDYRHLSLIADHMTHTGSYLPMSRHGSISES 1663
Query: 1005 LSPFLKMSFETASKFIVEAASFGLADELE 1091
LSPFLKMSFETASKFIVEAAS GL D+L+
Sbjct: 1664 LSPFLKMSFETASKFIVEAASHGLTDKLD 1692
>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
lycopersicum]
Length = 1677
Score = 343 bits (880), Expect = 7e-92
Identities = 192/385 (49%), Positives = 254/385 (65%), Gaps = 22/385 (5%)
Frame = +3
Query: 3 EFVSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXXEDAEEDNSGAGT 182
+FVSS+D + TL+ VFL+E+E IE+HL LSKI+GI+NF D E+N+ +
Sbjct: 1272 DFVSSEDCEYTLKFVFLRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTR 1331
Query: 183 RXXXXXXXXXXXXXXXXXXXX--AQKR----TDEINYGDESDVDHCEDELSA---DTKKG 335
R AQKR TDE++Y D+ D E E +A D K
Sbjct: 1332 REEEMLDDDDDDEDERTEDLSSDAQKRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKSE 1391
Query: 336 TSDGEDHEDMDTSKDEG-AEHSGK-----EDETNDEQNEYEGSTRSKKTNAKPRRAVKH- 494
+D D+ D + + D G EH+ K ED +N + ++ + T K+ K RR+ K
Sbjct: 1392 QTDEIDNGDEEENGDRGNEEHTSKLQSTEEDISNTKTSKSKTKTTVKQKKKKERRSKKDS 1451
Query: 495 ---VF---EGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKT 656
VF EG FEVHF+F EPH+LLAQ+AQKTA+KV++K SG++ QCR+V+Y+ E T
Sbjct: 1452 DRCVFVDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENT 1511
Query: 657 VIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAVLN 836
V+W++ + K Q D+ YWA+KA+G DF +FW MQ+DLD+ R+Y+NN+ A+LN
Sbjct: 1512 VMWDEN------QTKQQRQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLN 1565
Query: 837 TYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLSPF 1016
TYGVEAARA+++REVK VF IYGV+ID+RHLSLIAD+MTHTGGY+PM+RHGSISESLSPF
Sbjct: 1566 TYGVEAARASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPF 1625
Query: 1017 LKMSFETASKFIVEAASFGLADELE 1091
LKMSFETASKFIVEAA+ GL D LE
Sbjct: 1626 LKMSFETASKFIVEAAAHGLTDNLE 1650
>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
tuberosum]
Length = 1675
Score = 339 bits (870), Expect = 1e-90
Identities = 183/387 (47%), Positives = 250/387 (64%), Gaps = 24/387 (6%)
Frame = +3
Query: 3 EFVSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXXEDAEEDNSGAGT 182
+FVSS+D + TL+ VFL+E+E IE+HL LSKI+GI+NF D E+N+ +
Sbjct: 1272 DFVSSEDCEYTLKFVFLRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTR 1331
Query: 183 RXXXXXXXXXXXXXXXXXXXXAQKR----TDEINYGDESDVDHCEDELSADTKKGTSDGE 350
AQKR TDE++Y D+ + D E + +K E
Sbjct: 1332 HEEEMLDDEDEDERTEDLSSDAQKRKQQTTDEMDYDDDENEDEAETTAEIEDEKS----E 1387
Query: 351 DHEDMDTSKDEGAEHSGKEDETNDEQNEYE--GSTRSKKTNAKPRRAVKH---------- 494
+++D +E + G E++ + Q+ + +T+S K+ K + VK
Sbjct: 1388 QTDEIDNGDEEEIGNRGNEEQMSKLQSTEDDISNTKSSKSKTKTKTTVKQNKKKERRSKK 1447
Query: 495 -----VF---EGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDE 650
VF EG FEVHF+F EPH+LLAQ+AQKTA+KV++K SG++ QCR+V+Y+ E
Sbjct: 1448 DSDRCVFVDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRMVKYEVTE 1507
Query: 651 KTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAV 830
TV+W++ + K Q+ D+ YWA+KA+G DF +FW MQ+DLD+ R+Y+NN+ A+
Sbjct: 1508 NTVMWDEY------QTKQQSQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAM 1561
Query: 831 LNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLS 1010
LNTYGVEAARA+++REVK VF IYGV+ID+RHLSLIAD+MTHTGGY+PM+RHGSISESLS
Sbjct: 1562 LNTYGVEAARASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLS 1621
Query: 1011 PFLKMSFETASKFIVEAASFGLADELE 1091
PFLKMSFETASKFIVEAA+ GL D LE
Sbjct: 1622 PFLKMSFETASKFIVEAAAHGLTDNLE 1648
>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
Length = 1626
Score = 338 bits (867), Expect = 2e-90
Identities = 185/388 (47%), Positives = 245/388 (63%), Gaps = 25/388 (6%)
Frame = +3
Query: 3 EFVSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXX-EDAEEDNSGAG 179
EFVS +D KTL+ FLKE+E +ENH++FL K++ I +F + EED + G
Sbjct: 1216 EFVSLEDTYKTLKTSFLKELEDALENHVVFLKKVAVINDFASHSRFEALSEGEEDKASDG 1275
Query: 180 TRXXXXXXXXXXXXXXXXXXXXA------QKRTDEINYGDESDVDHCEDELSADTKKGTS 341
+ + Q+ D+++Y D SD + E+E D
Sbjct: 1276 AQEAEEEGDDDGGDSDAGEDLDSDVQKRRQQARDDMDYEDASDSEQREEEEDLDKANAEE 1335
Query: 342 DGEDHEDMDTSK--DEGAEHSGKEDETND-EQNEYEGSTRS--------------KKTNA 470
D +D E+ K D+ ++ + E N E+ +G +S T
Sbjct: 1336 DDDDDENEWNEKCDDDHDDYDQRSSEKNMVEKPILKGRKKSVAAITSEKIDLSTMPSTGK 1395
Query: 471 KPRRAVKHVFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSG-EMSQCRLVQYDPD 647
+ RA+ EG S EVHFKFT+EPHVLLAQ+ QKTA+KV++K++G +++QC+LVQYDPD
Sbjct: 1396 RENRAIYMEIEGLSLEVHFKFTSEPHVLLAQVVQKTAKKVYVKKTGGKLNQCKLVQYDPD 1455
Query: 648 EKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHA 827
EKTVIW+D K ++ + DDA YWA+KASG+D +SFW M + LDLNRLY NN+H+
Sbjct: 1456 EKTVIWDDDKKKEKATKNGRKADDDAAYWAVKASGSDVESFWEMSDYLDLNRLYCNNIHS 1515
Query: 828 VLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESL 1007
+L TYGVEAA AT+IRE+K VFDIYGVKIDYRHLSLI D+M H GGYRPM+RHGSI +S+
Sbjct: 1516 MLKTYGVEAASATIIREMKNVFDIYGVKIDYRHLSLIGDHMAHAGGYRPMSRHGSIPDSV 1575
Query: 1008 SPFLKMSFETASKFIVEAASFGLADELE 1091
SPFLKMSFETASKFIVEAA +GL D+LE
Sbjct: 1576 SPFLKMSFETASKFIVEAAIYGLRDDLE 1603
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 294 bits (752), Expect = 5e-77
Identities = 174/380 (45%), Positives = 242/380 (63%), Gaps = 19/380 (5%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXX-EDAEEDNSGAGTR 185
+S +D ++TLE VF++E+E I+NHL+ LSKISGIKNF+ ++ +ED SG G
Sbjct: 1271 ISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLA 1330
Query: 186 XXXXXXXXXXXXXXXXXXXX--AQKR----TDEINYGDESDVDHCEDELSADTKKGTSDG 347
AQKR +DE++YGD S+ + E E SA +
Sbjct: 1331 GGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGD-SEGEPDEGEPSAGLTEEIDLV 1389
Query: 348 EDHEDMDTSKDEGAEHSGKEDETNDEQNEYEGSTRSK-KTNAKPR---RAVKHVFE---- 503
ED ++ +++ G S +DE + ++ + S K KT AK + RA+K F+
Sbjct: 1390 EDEVEISNNEEVGI--SDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAIL 1447
Query: 504 ----GSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWND 671
G+ FEVHF+FT EPH+LLAQIAQK A KV+++ SG++ C+++ + D+ D
Sbjct: 1448 VKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRD 1507
Query: 672 TMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAVLNTYGVE 851
PK+ EN P G + A++ +G DF +FW MQ++LD+ +YSNNVHA+LNT+GVE
Sbjct: 1508 ---PKKRENIP--GEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVE 1562
Query: 852 AARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLSPFLKMSF 1031
AARAT+I+EV VF+ YGVK++ RHLSLIAD+MTH+GGYRPMNRHG I+ES+SPF KM+F
Sbjct: 1563 AARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTF 1622
Query: 1032 ETASKFIVEAASFGLADELE 1091
ETASKFIVEAAS G+ D LE
Sbjct: 1623 ETASKFIVEAASHGMTDNLE 1642
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 294 bits (752), Expect = 5e-77
Identities = 174/380 (45%), Positives = 242/380 (63%), Gaps = 19/380 (5%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXX-EDAEEDNSGAGTR 185
+S +D ++TLE VF++E+E I+NHL+ LSKISGIKNF+ ++ +ED SG G
Sbjct: 1342 ISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLA 1401
Query: 186 XXXXXXXXXXXXXXXXXXXX--AQKR----TDEINYGDESDVDHCEDELSADTKKGTSDG 347
AQKR +DE++YGD S+ + E E SA +
Sbjct: 1402 GGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGD-SEGEPDEGEPSAGLTEEIDLV 1460
Query: 348 EDHEDMDTSKDEGAEHSGKEDETNDEQNEYEGSTRSK-KTNAKPR---RAVKHVFE---- 503
ED ++ +++ G S +DE + ++ + S K KT AK + RA+K F+
Sbjct: 1461 EDEVEISNNEEVGI--SDPKDEDSKVPSKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAIL 1518
Query: 504 ----GSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWND 671
G+ FEVHF+FT EPH+LLAQIAQK A KV+++ SG++ C+++ + D+ D
Sbjct: 1519 VKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRD 1578
Query: 672 TMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAVLNTYGVE 851
PK+ EN P G + A++ +G DF +FW MQ++LD+ +YSNNVHA+LNT+GVE
Sbjct: 1579 ---PKKRENIP--GEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVE 1633
Query: 852 AARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLSPFLKMSF 1031
AARAT+I+EV VF+ YGVK++ RHLSLIAD+MTH+GGYRPMNRHG I+ES+SPF KM+F
Sbjct: 1634 AARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTF 1693
Query: 1032 ETASKFIVEAASFGLADELE 1091
ETASKFIVEAAS G+ D LE
Sbjct: 1694 ETASKFIVEAASHGMTDNLE 1713
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 260 bits (664), Expect = 8e-67
Identities = 160/393 (40%), Positives = 219/393 (55%), Gaps = 32/393 (8%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXXE-DAEEDNSG--AG 179
+S +D ++TLE VFL+E+E I+NH+ LS+ISGIK+F+ +A+ED +G +
Sbjct: 1272 ISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADEDVAGDMSH 1331
Query: 180 TRXXXXXXXXXXXXXXXXXXXXAQKR----TDEINYGD-------ESDVDHCEDELSADT 326
AQKR TDE++Y D E + E+E ++
Sbjct: 1332 REERDDDNDDDDGERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGESTASEEESGFES 1391
Query: 327 KKGTSDGEDHEDMDTSKDEGAEHS----------GKEDETNDEQNEYEGSTRSKKTNAKP 476
+ D E D D A + K+ + + + KK AK
Sbjct: 1392 EIDQGDNETEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKR 1451
Query: 477 RRAVKHVFEGS--------SFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLV 632
+ + F+ + FEVHFKFT EPH+LLA+IAQKTA+KV+++ G++ QCR+
Sbjct: 1452 KSRISKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVT 1511
Query: 633 QYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYS 812
D E VI+ +R + KP A+ A+G DF +FW MQ+ LD+ +YS
Sbjct: 1512 --DCKESQVIYYGKDPKERVDLKPDVKEKVP---ALHATGVDFNTFWKMQDHLDVRYIYS 1566
Query: 813 NNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGS 992
NN+HA+L TYGVEAAR T+IRE+ VF YG+ + RHLSLIAD+MTHTGGYRPM+R G
Sbjct: 1567 NNIHAMLKTYGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGG 1626
Query: 993 ISESLSPFLKMSFETASKFIVEAASFGLADELE 1091
I+ES+SPF KMSFETASKFIVEAA G D LE
Sbjct: 1627 IAESISPFSKMSFETASKFIVEAALHGEIDNLE 1659
>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
isoform 4 [Theobroma cacao]
Length = 1397
Score = 259 bits (663), Expect = 1e-66
Identities = 154/387 (39%), Positives = 217/387 (56%), Gaps = 26/387 (6%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFM-XXXXXXXEDAEEDNSGAGTR 185
++ KD + L+ VFL+E+E I+NHL+ LSKISGIK FM + +ED S +R
Sbjct: 991 ITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSR 1050
Query: 186 ---------XXXXXXXXXXXXXXXXXXXXAQKRTDEINYGDESDVDHCEDELSADTKKGT 338
Q+ TDE++Y D+S+V+ E A +
Sbjct: 1051 ETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALESEI 1110
Query: 339 SDGEDHE--------DMDTSKDEGAEHS-GKEDETNDEQNEYEGSTRSKKTNAKPR---- 479
ED D KDE ++ S E+ +N + E + + K+ K +
Sbjct: 1111 DMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRK 1170
Query: 480 ---RAVKHVFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDE 650
RA+ + G FEVHFK EPH+LLAQIA+KTA+KV+++ G++ QCR+ ++
Sbjct: 1171 ESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQ 1230
Query: 651 KTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAV 830
D K K +K + A+ +G DF +FW M++ +D+ LYSN++HA+
Sbjct: 1231 VFYYGEDPKKRKSPSDKEK-------IQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAM 1283
Query: 831 LNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLS 1010
LNTYGVEAAR T+IRE+ VF YG+ ++ RHL+LIAD+MTH+G YRPM+R G I+ES+S
Sbjct: 1284 LNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESIS 1343
Query: 1011 PFLKMSFETASKFIVEAASFGLADELE 1091
PF KMSFETASKFIVEAA GL D LE
Sbjct: 1344 PFSKMSFETASKFIVEAAKHGLVDNLE 1370
>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
isoform 3 [Theobroma cacao]
Length = 1400
Score = 259 bits (663), Expect = 1e-66
Identities = 154/387 (39%), Positives = 217/387 (56%), Gaps = 26/387 (6%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFM-XXXXXXXEDAEEDNSGAGTR 185
++ KD + L+ VFL+E+E I+NHL+ LSKISGIK FM + +ED S +R
Sbjct: 994 ITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSR 1053
Query: 186 ---------XXXXXXXXXXXXXXXXXXXXAQKRTDEINYGDESDVDHCEDELSADTKKGT 338
Q+ TDE++Y D+S+V+ E A +
Sbjct: 1054 ETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALESEI 1113
Query: 339 SDGEDHE--------DMDTSKDEGAEHS-GKEDETNDEQNEYEGSTRSKKTNAKPR---- 479
ED D KDE ++ S E+ +N + E + + K+ K +
Sbjct: 1114 DMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRK 1173
Query: 480 ---RAVKHVFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDE 650
RA+ + G FEVHFK EPH+LLAQIA+KTA+KV+++ G++ QCR+ ++
Sbjct: 1174 ESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQ 1233
Query: 651 KTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAV 830
D K K +K + A+ +G DF +FW M++ +D+ LYSN++HA+
Sbjct: 1234 VFYYGEDPKKRKSPSDKEK-------IQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAM 1286
Query: 831 LNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLS 1010
LNTYGVEAAR T+IRE+ VF YG+ ++ RHL+LIAD+MTH+G YRPM+R G I+ES+S
Sbjct: 1287 LNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESIS 1346
Query: 1011 PFLKMSFETASKFIVEAASFGLADELE 1091
PF KMSFETASKFIVEAA GL D LE
Sbjct: 1347 PFSKMSFETASKFIVEAAKHGLVDNLE 1373
>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
putative isoform 2 [Theobroma cacao]
Length = 1689
Score = 259 bits (663), Expect = 1e-66
Identities = 154/387 (39%), Positives = 217/387 (56%), Gaps = 26/387 (6%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFM-XXXXXXXEDAEEDNSGAGTR 185
++ KD + L+ VFL+E+E I+NHL+ LSKISGIK FM + +ED S +R
Sbjct: 1283 ITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSR 1342
Query: 186 ---------XXXXXXXXXXXXXXXXXXXXAQKRTDEINYGDESDVDHCEDELSADTKKGT 338
Q+ TDE++Y D+S+V+ E A +
Sbjct: 1343 ETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALESEI 1402
Query: 339 SDGEDHE--------DMDTSKDEGAEHS-GKEDETNDEQNEYEGSTRSKKTNAKPR---- 479
ED D KDE ++ S E+ +N + E + + K+ K +
Sbjct: 1403 DMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRK 1462
Query: 480 ---RAVKHVFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDE 650
RA+ + G FEVHFK EPH+LLAQIA+KTA+KV+++ G++ QCR+ ++
Sbjct: 1463 ESDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQ 1522
Query: 651 KTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAV 830
D K K +K + A+ +G DF +FW M++ +D+ LYSN++HA+
Sbjct: 1523 VFYYGEDPKKRKSPSDKEK-------IQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAM 1575
Query: 831 LNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLS 1010
LNTYGVEAAR T+IRE+ VF YG+ ++ RHL+LIAD+MTH+G YRPM+R G I+ES+S
Sbjct: 1576 LNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESIS 1635
Query: 1011 PFLKMSFETASKFIVEAASFGLADELE 1091
PF KMSFETASKFIVEAA GL D LE
Sbjct: 1636 PFSKMSFETASKFIVEAAKHGLVDNLE 1662
>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
max]
Length = 1651
Score = 257 bits (657), Expect = 5e-66
Identities = 153/382 (40%), Positives = 216/382 (56%), Gaps = 21/382 (5%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXXEDAEEDNSGAGTR- 185
++ D ++TL F++E+E I+NH+ LSKISGIK F ++ ED G+
Sbjct: 1249 ITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGIKKFKTDPQSNYSNSSEDAHSNGSES 1308
Query: 186 ---------XXXXXXXXXXXXXXXXXXXXAQKR----TDEINYGDESDVDHCEDELSADT 326
AQKR TDE++Y D + + + ELS +
Sbjct: 1309 EKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKLQGTDEVDYEDGPEEETHDGELSEEI 1368
Query: 327 KKGTSDGED-------HEDMDTSKDEGAEHSGKEDETNDEQNEYEGSTRSKKTNAKPRRA 485
+G DG D + D + EG E K +++QN +S+ T K RA
Sbjct: 1369 -EGDEDGSDVDANENYNNVTDANNSEGLEKPSKSKTIDEKQNLKREKKKSEPTTKKYDRA 1427
Query: 486 VKHVFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIW 665
+ +G FE+HF+FT EPH+LL QIAQ+TA+KV ++ G++ +C+ + E VI+
Sbjct: 1428 IFVEAKGKHFEIHFRFTGEPHILLTQIAQRTAKKVCIQNFGKVGECKAITC--KESGVIY 1485
Query: 666 NDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAVLNTYG 845
KR E + ++ A++ SG FK+FW +++DLD+ +YSNNVHA+LN YG
Sbjct: 1486 YGKDGRKRIE---ISASEKEQIPALQTSGVHFKTFWELEDDLDVRYIYSNNVHAMLNAYG 1542
Query: 846 VEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLSPFLKM 1025
VEAAR T+IREV+ VF YG+ ++ RHL+LIAD+MTHTG YRPMNR GSI++S SPF+KM
Sbjct: 1543 VEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHTGSYRPMNRTGSIADSTSPFIKM 1602
Query: 1026 SFETASKFIVEAASFGLADELE 1091
FETA FIVEAA G D LE
Sbjct: 1603 CFETAGNFIVEAAYHGQVDNLE 1624
>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
gi|462398594|gb|EMJ04262.1| hypothetical protein
PRUPE_ppa000153mg [Prunus persica]
Length = 1612
Score = 257 bits (656), Expect = 7e-66
Identities = 160/401 (39%), Positives = 226/401 (56%), Gaps = 41/401 (10%)
Frame = +3
Query: 12 SSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNF---------------MXXXXXXX 146
SS+D ++ LE VF++E+E I+NH++ LSKISGIKNF +
Sbjct: 1194 SSEDWEEILEIVFVRELEDAIQNHILLLSKISGIKNFTPDSQPKASNETDENLPEKRSQR 1253
Query: 147 EDAEEDNSGAGTRXXXXXXXXXXXXXXXXXXXXAQKR----TDEINY------------- 275
E+ ++DN GA A KR TDE++Y
Sbjct: 1254 EEEDDDNGGA--------DDGEHGEGVEDFGLDAHKRKLQATDEMDYEDGCDDEVREADL 1305
Query: 276 --GDESDVDHCED--ELSADTKKGTSDGEDHEDMDTSKDEG--AEHSGKEDET-NDEQNE 434
GDES++D E+ E+ D + G D D ++ G A+ KE +T + Q
Sbjct: 1306 SDGDESEIDEEENEVEIGKDGEIGVIDANDEMPGSPLEEAGDLAKPKSKEKKTKSGSQIR 1365
Query: 435 YEGSTRSKKTNAKPRRAVKHVFEGSSFEVHFKFT-TEPHVLLAQIAQKTAQKVFLKRSGE 611
+ R++ + RA+ +G FEVHF+F EPH+LL+QIAQKTAQKV+++RSG+
Sbjct: 1366 KKRKVRAEMVKKETDRAIFVSAKGFHFEVHFRFADNEPHILLSQIAQKTAQKVYIQRSGK 1425
Query: 612 MSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYW-AMKASGTDFKSFWNMQED 788
++ C+ + D ++ D ENK + + A++ +G DF +FW +Q+
Sbjct: 1426 VADCKQITCDENQVLCFGKDP------ENKQSFSSKEKKEMPALQTTGIDFGTFWQLQDV 1479
Query: 789 LDLNRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGY 968
LD+ +YSNN+HA+LNTYGVEAAR T+IRE+ VF YG+ ++ RHL+LIAD+MTH GGY
Sbjct: 1480 LDVRYIYSNNIHAMLNTYGVEAARETIIREINNVFKSYGISVNIRHLTLIADFMTHAGGY 1539
Query: 969 RPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELE 1091
RP+NR G I ES+SPF KM+FETASKFIVEAA G D LE
Sbjct: 1540 RPLNRFGGIVESISPFNKMTFETASKFIVEAAYHGQVDRLE 1580
>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
putative isoform 1 [Theobroma cacao]
Length = 1665
Score = 256 bits (653), Expect = 2e-65
Identities = 150/386 (38%), Positives = 215/386 (55%), Gaps = 25/386 (6%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXXEDAEEDNSGAGTRX 188
++ KD + L+ VFL+E+E I+NHL+ LSKISGIK FM + +++ G
Sbjct: 1286 ITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEG--- 1342
Query: 189 XXXXXXXXXXXXXXXXXXXAQKRTDEINYGDESDVDHCEDELSADTKKGTSDGEDHEDMD 368
R+ E D+ D D +DE A+ G S ++D
Sbjct: 1343 ----------------------RSRETKNDDDDDDDDADDEERAEDL-GASLAALESEID 1379
Query: 369 TSKDEGA--------EHSGKEDETNDE---QNEYEGSTRSKKTNAKPRR----------- 482
S+DE +GK++ + +N +R +KT ++P+R
Sbjct: 1380 MSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKE 1439
Query: 483 ---AVKHVFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEK 653
A+ + G FEVHFK EPH+LLAQIA+KTA+KV+++ G++ QCR+ ++
Sbjct: 1440 SDRAIFNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQV 1499
Query: 654 TVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAVL 833
D K K +K + A + +G DF +FW M++ +D+ LYSN++HA+L
Sbjct: 1500 FYYGEDPKKRKSPSDKEKIQA-------LHTTGVDFGAFWKMEDHIDVRYLYSNSIHAML 1552
Query: 834 NTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLSP 1013
NTYGVEAAR T+IRE+ VF YG+ ++ RHL+LIAD+MTH+G YRPM+R G I+ES+SP
Sbjct: 1553 NTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISP 1612
Query: 1014 FLKMSFETASKFIVEAASFGLADELE 1091
F KMSFETASKFIVEAA GL D LE
Sbjct: 1613 FSKMSFETASKFIVEAAKHGLVDNLE 1638
>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
gi|561018822|gb|ESW17626.1| hypothetical protein
PHAVU_007G255400g [Phaseolus vulgaris]
Length = 1637
Score = 253 bits (645), Expect = 1e-64
Identities = 150/373 (40%), Positives = 216/373 (57%), Gaps = 12/373 (3%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXX---EDA-----EED 164
++ +D + TL F++E+E IENH+ LSKISGIK F EDA E +
Sbjct: 1243 ITLEDWEDTLRISFVRELEDAIENHMALLSKISGIKKFKTDPQSHSNSSEDAHGNGSESE 1302
Query: 165 NSGAGTRXXXXXXXXXXXXXXXXXXXXAQKR----TDEINYGDESDVDHCEDELSADTKK 332
G AQKR TDE++Y D + + + LS + +
Sbjct: 1303 TKGKSNDDDDDDDVVEDTEGYEDLGSDAQKRKRQGTDEVDYEDGPEEETHDGVLSEEIEN 1362
Query: 333 GTSDGEDHEDMDTSKDEGAEHSGKEDETNDEQNEYEGSTRSKKTNAKPRRAVKHVFEGSS 512
+ +D+ +D S EG + + ++ + +S+ T K RAV +G
Sbjct: 1363 DEDNVDDNMTLDASDSEGLDELSESKSIFEKDSLKREKKKSRPTTRKYDRAVFVKAKGMH 1422
Query: 513 FEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRG 692
F++HFKFT EP +LLA+IA ++A+KV ++ SG + +C+ V E V++ KR
Sbjct: 1423 FQIHFKFTGEPDILLAEIALRSAKKVCIQNSGRVGECKAVTCK--ESGVMYYGEDSRKR- 1479
Query: 693 ENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAVLNTYGVEAARATLI 872
++ P + + A++ SG FK+FW +Q+DLD+ +YSNNVHA+LN YGVEAAR T+I
Sbjct: 1480 DDIPASVKEKIP--ALQTSGVHFKTFWELQDDLDVRYIYSNNVHAMLNAYGVEAARETII 1537
Query: 873 REVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLSPFLKMSFETASKFI 1052
REV+ VF YG+ ++ RHL+LIAD+MTH+GGYRPMNR+GSI++ SPF+KM FETASKFI
Sbjct: 1538 REVQNVFKSYGISVNIRHLTLIADFMTHSGGYRPMNRNGSIADCTSPFIKMCFETASKFI 1597
Query: 1053 VEAASFGLADELE 1091
VEAA G D LE
Sbjct: 1598 VEAAYHGQVDNLE 1610
>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
sativus]
Length = 1650
Score = 252 bits (644), Expect = 2e-64
Identities = 147/379 (38%), Positives = 219/379 (57%), Gaps = 18/379 (4%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXXEDAEEDNSGAGTRX 188
+S +D++ TLE VFL+E+E IE ++ LSKI+GIKNF+ ++ S + +
Sbjct: 1250 ISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKNFVPDSQSKGSSEGDEVSSSRQKE 1309
Query: 189 XXXXXXXXXXXXXXXXXXXAQKR-----TDEINYGDESDVDHCEDELSADTKKGTSDGED 353
K+ DE++Y D+S+ D E S + G++
Sbjct: 1310 NDDDDDEGNDLDVAEDLGSDMKKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQGDE 1369
Query: 354 HE----DM-DTSKDEGAEH--------SGKEDETNDEQNEYEGSTRSKKTNAKPRRAVKH 494
E DM + KD +E+ E E ++ + +S+ + R++
Sbjct: 1370 AEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVKSELVRKETDRSIFV 1429
Query: 495 VFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDT 674
+ + FEVHFKFT EPH LL+QI Q+ AQKV ++RSG++ QC+ Q E VI++
Sbjct: 1430 EAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQ--QITCKEGQVIYHGN 1487
Query: 675 MKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAVLNTYGVEA 854
+R KP+ + A++ SG DFK+ W MQ++LD+ +YSN++HA+L TYGVEA
Sbjct: 1488 NLKERKNLKPE---EKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEA 1544
Query: 855 ARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLSPFLKMSFE 1034
ARAT+IRE++ +F YG+ ++ RHLSL+ADYMTH+GGYRPM+R G IS+S+SPF +M+FE
Sbjct: 1545 ARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFE 1604
Query: 1035 TASKFIVEAASFGLADELE 1091
TA KFIV+AA G D LE
Sbjct: 1605 TAGKFIVQAALHGEVDNLE 1623
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
RPA1-like [Cucumis sativus]
Length = 1652
Score = 250 bits (638), Expect = 8e-64
Identities = 144/378 (38%), Positives = 216/378 (57%), Gaps = 17/378 (4%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXXEDAEEDNSGAGTRX 188
+S +D++ TLE VFL+E+E IE ++ LSKI+GIK F+ ++ S +
Sbjct: 1253 ISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKXFVPDSQSKGSSEGDEVSSSRQEE 1312
Query: 189 XXXXXXXXXXXXXXXXXXXAQKR----TDEINYGDESDVDHCEDELSADTKKGTSDGEDH 356
+K+ DE++Y D+S+ D E S + G++
Sbjct: 1313 MDDDDEGNDLDVAEDLGSDXEKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQGDEA 1372
Query: 357 EDMDTSKDEGAEHSGKED-------------ETNDEQNEYEGSTRSKKTNAKPRRAVKHV 497
E + E + S E+ E E ++ + +S+ + R++
Sbjct: 1373 EITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTETSKEKKKVKSELVRKETDRSIFVE 1432
Query: 498 FEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTM 677
+ + FEVHFKFT EPH LL+QI Q+ AQKV ++RSG++ QC+ Q E VI++
Sbjct: 1433 AKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQ--QITCKEGQVIYHGNN 1490
Query: 678 KPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAVLNTYGVEAA 857
+R KP+ + A++ SG DFK+ W MQ++LD+ +YSN++HA+L TYGVEAA
Sbjct: 1491 LKERKNLKPE---EKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAA 1547
Query: 858 RATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLSPFLKMSFET 1037
RAT+IRE++ +F YG+ ++ RHLSL+ADYMTH+GGYRPM+R G IS+S+SPF +M+FET
Sbjct: 1548 RATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFET 1607
Query: 1038 ASKFIVEAASFGLADELE 1091
A KFIV+AA G D LE
Sbjct: 1608 AGKFIVQAALHGEVDNLE 1625
>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
190K chain-like protein [Arabidopsis thaliana]
gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
[Arabidopsis thaliana]
Length = 1670
Score = 249 bits (637), Expect = 1e-63
Identities = 147/375 (39%), Positives = 221/375 (58%), Gaps = 14/375 (3%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXXEDAEEDNSGAGTRX 188
++ +D ++T+ VFL+++E IE H+ L +I GI N + E + D+S +G +
Sbjct: 1279 ITEEDWEETMRAVFLRKLEDAIETHMKMLHRIRGIHNDVTGPIAGNE-TDNDDSVSGKQN 1337
Query: 189 XXXXXXXXXXXXXXXXXXXAQKR----TDEINYGDESDVDHCEDELSADTKKGTSDGEDH 356
AQK+ TDE++Y + S+ + E + + D E+
Sbjct: 1338 EDDGDDDGEGTEVDDLGSDAQKQKKQETDEMDYEENSEDETNEPSSISGVEDPEMDSEN- 1396
Query: 357 EDMDTSKDEGAEHSGKEDETNDEQNEYEGSTRSKKTNAKPRRAV------KHVF---EGS 509
ED + SK++ E ++E+ + Q E +G K+ + K RR +H+F EG
Sbjct: 1397 EDTEVSKEDTPE---PQEESMEPQKEVKGVKNVKEQSKKKRRKFVRAKSDRHIFVKGEGE 1453
Query: 510 SFEVHFKFTTE-PHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVIWNDTMKPK 686
FEVHFKF T+ PH+LLAQIAQ+TAQKV+++ SG++ +C + D + + D K +
Sbjct: 1454 KFEVHFKFATDDPHILLAQIAQQTAQKVYIQNSGKIERCTVANCG-DPQVIYHGDNPKER 1512
Query: 687 RGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAVLNTYGVEAARAT 866
R + + A AL+ ASG DF + W Q+ LD+ LYSN++H +LN +GVEAAR T
Sbjct: 1513 REISNDEKKASPALH----ASGVDFPALWEFQDKLDVRYLYSNSIHDMLNIFGVEAARET 1568
Query: 867 LIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLSPFLKMSFETASK 1046
+IRE+ VF YG+ + RHL+LIADYMT +GGYRPM+R G I+ES SPF +M+FETA+K
Sbjct: 1569 IIREINHVFKSYGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATK 1628
Query: 1047 FIVEAASFGLADELE 1091
FIV+AA++G D LE
Sbjct: 1629 FIVQAATYGEKDTLE 1643
>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1650
Score = 249 bits (635), Expect = 2e-63
Identities = 155/383 (40%), Positives = 217/383 (56%), Gaps = 22/383 (5%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXXEDAEEDN--SGAGT 182
V+ KD ++TL F++ +E IEN++ L+KISGI NF + ED+ +G
Sbjct: 1246 VTLKDWEETLRVSFVRGLEDAIENNIALLAKISGITNFKTDAQPNSSNGAEDDPSNGKTN 1305
Query: 183 RXXXXXXXXXXXXXXXXXXXXAQKR----TDEINYGDESDVDHCEDELSADTKKGTSDGE 350
AQK D+++Y D + + ED ++ +G D +
Sbjct: 1306 DDDDDDGDADDTEGAEDLGLDAQKSKRQVVDDVDYDDGPEEETLEDGELSEDLEGVEDAK 1365
Query: 351 DHEDMDTSKDEGAEHSGKEDETND--EQNEY--------------EGSTRSKKTNAKPRR 482
D+E + D + GK DE E NE E +++S+ + K R
Sbjct: 1366 DNEYVKDDGDGKDDEDGKGDEDGSDIEVNENDKKVTLGANYSQGPEENSKSQPVSKKFDR 1425
Query: 483 AVKHVFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDPDEKTVI 662
V FE FE+HFKFT EPH+LLAQIAQKTA+KV ++ G++ QC+ + E VI
Sbjct: 1426 RVYVKFEKRHFEIHFKFTGEPHILLAQIAQKTAEKVCIQNFGKVGQCKAITCK--ESGVI 1483
Query: 663 WNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVHAVLNTY 842
+ KR E P + + A++ SG FKSFW MQ+DL++ +YSNNVHA+L+TY
Sbjct: 1484 YYGEDDSKR-EEIPSSVKEKIP--ALQTSGIHFKSFWEMQDDLNVRYVYSNNVHAILSTY 1540
Query: 843 GVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISESLSPFLK 1022
GVEAA+ T+IREV+ VF YG+ ++ RHL LIAD+MTH+G YRPM+R GSI++S SPFLK
Sbjct: 1541 GVEAAKETIIREVQNVFKSYGISVNIRHLMLIADFMTHSGCYRPMSRKGSIADSTSPFLK 1600
Query: 1023 MSFETASKFIVEAASFGLADELE 1091
+ FETAS FIVEAA G D L+
Sbjct: 1601 ICFETASNFIVEAACHGQVDNLD 1623
>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
gi|550335519|gb|ERP58815.1| hypothetical protein
POPTR_0006s05420g [Populus trichocarpa]
Length = 1132
Score = 248 bits (632), Expect = 4e-63
Identities = 162/406 (39%), Positives = 226/406 (55%), Gaps = 45/406 (11%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXXE-DAEEDNSGAGTR 185
+S ++ ++TLE +F++E+E I+N+L+ LSKISGIKNF+ +AEED SG +R
Sbjct: 705 ISVENWEETLEVLFVRELEDAIQNYLVLLSKISGIKNFLKESHSGTPIEAEEDVSGNISR 764
Query: 186 XXXXXXXXXXXXXXXXXXXX--AQKR----TDEINYGDESDVDHCEDE-----------L 314
QKR TDE++Y D S+ EDE
Sbjct: 765 EGENDDDSDDEEGEEADDLGLDVQKRKQQVTDEMDYDDGSEGVLNEDEGDLSGSQAPSGS 824
Query: 315 SADTKKGTSDGE----DHEDMDTSKDEGAEHSGK------EDETNDEQNEYEGSTRSKKT 464
+DT+ + E D D D+ E H G +T++ ++ E ++ K T
Sbjct: 825 ESDTEPADKESEISNTDMVDYDSEYFEKPTHLGNYSKPKSRKKTSESSSQVEMHSKLKST 884
Query: 465 NAKPRRA---------VKHVFE--------GSSFEVHFKFTTEPHVLLAQIAQKTAQKVF 593
K ++A VK F+ G FE+H KFT EPH+LLA+IAQKTA+KV
Sbjct: 885 EKKKQKAKGKKVRSKLVKKDFDRSIFVEAKGLHFEIHLKFTNEPHILLAEIAQKTAKKVC 944
Query: 594 LKRSGEMSQCRLVQYDPDEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFW 773
++ G++ +C++ D E VI+ +R + +P + A+ G DF +FW
Sbjct: 945 IQNPGKVQRCQVT--DCKENQVIYYGKDPKRRIDIEP---GEKQKIPALHTIGVDFNTFW 999
Query: 774 NMQEDLDLNRLYSNNVHAVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMT 953
MQ+ LD+ +YSN++H +L YGVEAAR T+IRE+K VF+ YG+ ++ RHLSLIADYMT
Sbjct: 1000 KMQDHLDVRYMYSNSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMT 1059
Query: 954 HTGGYRPMNRHGSISESLSPFLKMSFETASKFIVEAASFGLADELE 1091
HTG YRPM+R G ISES+SP KMSFETASKFIVEAA G D LE
Sbjct: 1060 HTGEYRPMSRIGGISESISPLSKMSFETASKFIVEAALHGEVDNLE 1105
>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
sinensis]
Length = 1715
Score = 246 bits (629), Expect = 9e-63
Identities = 148/389 (38%), Positives = 219/389 (56%), Gaps = 28/389 (7%)
Frame = +3
Query: 9 VSSKDIKKTLEGVFLKEMEVQIENHLIFLSKISGIKNFMXXXXXXXEDAEEDNSGAGT-- 182
++ +D ++ LE VF++E+E I+NHL+ LSKI+GIKN + E D G+G
Sbjct: 1306 ITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKNVASGLTQKASN-ETDQDGSGNVS 1364
Query: 183 --RXXXXXXXXXXXXXXXXXXXXA----QKRTDEINYGD---------------ESDVDH 299
R A Q+ TDE +Y D S++D
Sbjct: 1365 QCRGDDDDADDADGEEAEDLGMDAHKQKQRATDEKDYEDGSEEEMNDGVSAAGFGSEIDQ 1424
Query: 300 CEDELSAD-TKKGTSDGEDHEDMDTSKDEGAEH----SGKEDETNDEQNEYEGSTRSKKT 464
E E+ D + D +++TS+D+ +E+ + K + + R+K
Sbjct: 1425 AESEIDDDQAETEIEDDRATNEIETSQDQASENLKPFTPKSSKKKSKSKSKRKKARAKLV 1484
Query: 465 NAKPRRAVKHVFEGSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYDP 644
RA+ G FE HFKF EP++LLAQIA+ A+KV+++ SG++ QC++ +
Sbjct: 1485 KKDTDRAIYVAARGMHFEAHFKFINEPNILLAQIARHVAKKVYIQSSGKIDQCQVT--NC 1542
Query: 645 DEKTVIWNDTMKPKRGENKPQTGADDALYWAMKASGTDFKSFWNMQEDLDLNRLYSNNVH 824
E VI+ R + KP+ + A+ +G DF +FW +Q+ +D+ +YSNN+
Sbjct: 1543 KESQVIYYGKDPKTREDIKPE---EKEKVQALHTTGVDFHAFWRLQDFIDVRYIYSNNIQ 1599
Query: 825 AVLNTYGVEAARATLIREVKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMNRHGSISES 1004
A+L TYGVEAAR T+IRE+K VF YG+ ++ RHLSLIAD+MTH+GGYRPM+R G I+ES
Sbjct: 1600 AMLETYGVEAARETIIREIKHVFGSYGISVNTRHLSLIADFMTHSGGYRPMSRLGGIAES 1659
Query: 1005 LSPFLKMSFETASKFIVEAASFGLADELE 1091
+SPF KM+FETASKFIVEAAS+G D+L+
Sbjct: 1660 VSPFSKMTFETASKFIVEAASYGQVDKLD 1688