BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00006671
         (402 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] g...   106   3e-21
gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]    105   5e-21
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]    105   5e-21
gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus]            103   3e-20
gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]            102   5e-20
gb|AEA39176.1| polyprotein [Dahlia mosaic virus]                      101   1e-19
gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]                  100   2e-19
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]         100   4e-19
ref|NP_043933.1| hypothetical protein [Strawberry vein banding v...    99   5e-19
gb|ABW80581.1| polyprotein [Dahlia mosaic virus]                       99   5e-19
gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]                       96   7e-18
ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic prote...    93   4e-17
ref|YP_006907834.1| polyprotein [Horseradish latent virus] gi|57...    90   4e-16
ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]...    90   4e-16
dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]       89   5e-16
dbj|BAO53624.1| reverse transcriptase [Cauliflower mosaic virus]       89   5e-16
dbj|BAO53617.1| reverse transcriptase [Cauliflower mosaic virus]       89   5e-16
dbj|BAO53505.1| reverse transcriptase [Cauliflower mosaic virus]       89   5e-16
dbj|BAO53435.1| reverse transcriptase [Cauliflower mosaic virus]       89   5e-16
ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic prote...    89   6e-16

>ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
           gi|21427196|gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
          Length = 674

 Score =  106 bits (265), Expect = 3e-21
 Identities = 53/134 (39%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
 Frame = +1

Query: 4   IPQDEDDLVLYTDASDHWWAAVLTKITPNGEEP-CRYCSGLFQENEAIRWHINEKEFFAI 180
           +P+ ED L++ TDASDH+W  VL   T  GEE  CRY SG F+  E + +H NEKE  A+
Sbjct: 532 LPKKEDSLIIETDASDHFWGGVLKAQTTEGEELICRYSSGTFKPAE-LNYHSNEKELLAV 590

Query: 181 RKAFKKWPLFLLAKKFTLKVDNTQA-KAFLKNKIESKPEKARLLRWQAECQYFIFDIVIV 357
           ++   K+ ++L    FT++ DN    K F+  KI    ++ RL+RWQ    ++ F +  +
Sbjct: 591 KQVITKFSIYLTPVCFTVRTDNVNLLKGFMNKKITGDSKQGRLIRWQMWFSHYTFKVDHL 650

Query: 358 KSHENILTDFLTRD 399
           K  +N+L D+LTR+
Sbjct: 651 KGEQNVLADYLTRE 664


>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 673

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/134 (38%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
 Frame = +1

Query: 4   IPQDEDDLVLYTDASDHWWAAVLTKITPNGEEP-CRYCSGLFQENEAIRWHINEKEFFAI 180
           +P+ ED L++ TDASDH+W  VL   T  G E  CRY SG F+  E + +H NEKE  A+
Sbjct: 534 LPKKEDSLIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAE-LNYHSNEKELLAV 592

Query: 181 RKAFKKWPLFLLAKKFTLKVDNTQA-KAFLKNKIESKPEKARLLRWQAECQYFIFDIVIV 357
           ++   K+ ++L    FT++ DN    K F+  KI    ++ RL+RWQ    ++ F++  +
Sbjct: 593 KQVITKFSIYLTPVTFTVRTDNVNLLKRFMNTKITGDSKQGRLIRWQMWLSHYTFNVNHL 652

Query: 358 KSHENILTDFLTRD 399
           K  +N+L D+LTR+
Sbjct: 653 KGEKNVLADYLTRE 666


>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
          Length = 673

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/134 (38%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
 Frame = +1

Query: 4   IPQDEDDLVLYTDASDHWWAAVLTKITPNGEEP-CRYCSGLFQENEAIRWHINEKEFFAI 180
           +P+ ED L++ TDASDH+W  VL   T  G E  CRY SG F+  E + +H NEKE  A+
Sbjct: 534 LPKKEDSLIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAE-LNYHSNEKELLAV 592

Query: 181 RKAFKKWPLFLLAKKFTLKVDNTQA-KAFLKNKIESKPEKARLLRWQAECQYFIFDIVIV 357
           ++   K+ ++L    FT++ DN    K F+  KI    ++ RL+RWQ    ++ F++  +
Sbjct: 593 KQVITKFSIYLTPVTFTVRTDNVNLLKRFMNTKITGDSKQGRLIRWQMWLSHYTFNVNHL 652

Query: 358 KSHENILTDFLTRD 399
           K  +N+L D+LTR+
Sbjct: 653 KGEKNVLADYLTRE 666


>gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus]
          Length = 814

 Score =  103 bits (256), Expect = 3e-20
 Identities = 52/132 (39%), Positives = 78/132 (59%)
 Frame = +1

Query: 4    IPQDEDDLVLYTDASDHWWAAVLTKITPNGEEPCRYCSGLFQENEAIRWHINEKEFFAIR 183
            +P++E+ L++ TDAS+ +W  VL   T + EE CRY SG F+  E   +H NEKE  A++
Sbjct: 681  LPKEEEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAEK-NYHSNEKELLAVK 739

Query: 184  KAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVIVKS 363
                K+ ++L   KF ++ DN     FLK KI    ++ RL+RWQ     + FDI  ++ 
Sbjct: 740  NTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEHLEG 799

Query: 364  HENILTDFLTRD 399
             +N+L D LTRD
Sbjct: 800  SKNVLADCLTRD 811


>gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]
          Length = 825

 Score =  102 bits (254), Expect = 5e-20
 Identities = 52/132 (39%), Positives = 76/132 (57%)
 Frame = +1

Query: 4    IPQDEDDLVLYTDASDHWWAAVLTKITPNGEEPCRYCSGLFQENEAIRWHINEKEFFAIR 183
            +P  ED L++ T AS+ +W  VL   T   EE C+Y SG F+  E   +H NEKE  A++
Sbjct: 688  LPNKEDFLIIETGASNEFWGGVLKVKTAETEEICKYTSGSFKTAEK-NYHSNEKELLAVK 746

Query: 184  KAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVIVKS 363
                K+ ++L+  KF ++ DN     FLK KI    ++ RL+RWQ     + FDI  ++ 
Sbjct: 747  NTISKFSIYLIPVKFLVRTDNRNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEHLEG 806

Query: 364  HENILTDFLTRD 399
             +N+L DFLTRD
Sbjct: 807  PKNVLADFLTRD 818


>gb|AEA39176.1| polyprotein [Dahlia mosaic virus]
          Length = 808

 Score =  101 bits (251), Expect = 1e-19
 Identities = 51/132 (38%), Positives = 78/132 (59%)
 Frame = +1

Query: 4    IPQDEDDLVLYTDASDHWWAAVLTKITPNGEEPCRYCSGLFQENEAIRWHINEKEFFAIR 183
            +P++++ L++ TDAS+ +W  VL   T + EE CRY SG F+  E   +H NEKE  A++
Sbjct: 675  LPKEKEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAEK-NYHSNEKELLAVK 733

Query: 184  KAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVIVKS 363
                K+ ++L   KF ++ DN     FLK KI    ++ RL+RWQ     + FDI  ++ 
Sbjct: 734  NTISKFSIYLTPVKFLVRTDNKNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEHLEG 793

Query: 364  HENILTDFLTRD 399
             +N+L D LTRD
Sbjct: 794  PKNVLADCLTRD 805


>gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]
          Length = 810

 Score =  100 bits (250), Expect = 2e-19
 Identities = 51/132 (38%), Positives = 78/132 (59%)
 Frame = +1

Query: 4    IPQDEDDLVLYTDASDHWWAAVLTKITPNGEEPCRYCSGLFQENEAIRWHINEKEFFAIR 183
            +P++++ L++ TDAS+ +W  VL   T   EE CRY SG F+  E   +H NEKE  A++
Sbjct: 677  LPKEKEFLIIETDASNDYWGGVLKAKTAEKEEVCRYTSGSFKTAEK-NYHSNEKELLAVK 735

Query: 184  KAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVIVKS 363
             A  K+ ++L   KF ++ D+     FLK KI    ++ RL+RWQ     + FDI  ++ 
Sbjct: 736  NAISKFSIYLTPVKFLVRTDSKNFTYFLKTKISGDNKQGRLVRWQMWFSRYTFDIEHLEG 795

Query: 364  HENILTDFLTRD 399
             +N+L D LTRD
Sbjct: 796  LKNVLADCLTRD 807


>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
          Length = 699

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 53/132 (40%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
 Frame = +1

Query: 7   PQDEDDLVLYTDASDHWWAAVLTKITPNGEEP-CRYCSGLFQENEAIRWHINEKEFFAIR 183
           P  ED  ++  DASD  W AVL    P G+E  CRY SG F+  E   +H NEKE  +I 
Sbjct: 564 PSPEDKPIIECDASDDHWGAVLKAKLPEGKEVICRYASGTFKPAEK-NYHSNEKEILSII 622

Query: 184 KAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVIVKS 363
           KA K +  ++L  KF ++ DNT A  F++  I    +++RL+RWQ   + + FDI  V  
Sbjct: 623 KAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQMALREYSFDIEHVSG 682

Query: 364 HENILTDFLTRD 399
            +N+L D +TR+
Sbjct: 683 QKNVLADIMTRE 694


>ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
           gi|1360613|emb|CAA65970.1| ORF V [Strawberry vein
           banding virus]
          Length = 708

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
 Frame = +1

Query: 7   PQDEDDLVLYTDASDHWWAAVLTKITPNGEEP-CRYCSGLFQENEAIRWHINEKEFFAIR 183
           P  ED  ++  DASD  W A+L    P G+E  CRY SG F+  E   +H NEKE  +I 
Sbjct: 573 PSPEDKPIIECDASDDHWGAILKAKLPEGKEVICRYASGTFKPAEK-NYHSNEKEILSII 631

Query: 184 KAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVIVKS 363
           KA K +  ++L  KF ++ DNT A  F++  I    +++RL+RWQ   + + FDI  V  
Sbjct: 632 KAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQMALREYSFDIEHVSG 691

Query: 364 HENILTDFLTRD 399
            +N+L D +TR+
Sbjct: 692 QKNVLADIMTRE 703


>gb|ABW80581.1| polyprotein [Dahlia mosaic virus]
          Length = 812

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 50/132 (37%), Positives = 77/132 (58%)
 Frame = +1

Query: 4    IPQDEDDLVLYTDASDHWWAAVLTKITPNGEEPCRYCSGLFQENEAIRWHINEKEFFAIR 183
            +P++++ L++ TDAS+ +W  VL   T + EE CRY SG F+  E   +H NEKE  A++
Sbjct: 679  LPKEKEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAER-NYHSNEKELLAVK 737

Query: 184  KAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVIVKS 363
                K+ ++L   KF ++ DN     FLK KI    ++ RL+RWQ     + FDI  ++ 
Sbjct: 738  NTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEHLEG 797

Query: 364  HENILTDFLTRD 399
             +N+L D L RD
Sbjct: 798  SKNVLADCLPRD 809


>gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]
          Length = 806

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 48/132 (36%), Positives = 76/132 (57%)
 Frame = +1

Query: 4    IPQDEDDLVLYTDASDHWWAAVLTKITPNGEEPCRYCSGLFQENEAIRWHINEKEFFAIR 183
            +P++++  ++ TDAS+ +W  VL   T + E  CRY SG F+  E   +H NEK+  A++
Sbjct: 673  LPKEKEFPIIETDASNDFWGGVLKAKTADKEAVCRYTSGSFKTAEK-NYHSNEKKLLAVK 731

Query: 184  KAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVIVKS 363
                K+ ++L   KF ++ DN     FLK KI    ++ RL+RWQ     + FDI  ++ 
Sbjct: 732  NTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLIRWQMWFSRYSFDIEHLEG 791

Query: 364  HENILTDFLTRD 399
             +N+L D LTRD
Sbjct: 792  SKNVLADCLTRD 803


>ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
           Reverse transcriptase] [Figwort mosaic virus]
           gi|130600|sp|P09523.1|POL_FMVD RecName: Full=Enzymatic
           polyprotein; Includes: RecName: Full=Aspartic protease;
           Includes: RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase gi|58813|emb|CAA29527.1|
           unnamed protein product [Figwort mosaic virus]
          Length = 666

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 48/133 (36%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
 Frame = +1

Query: 4   IPQDEDDLVLYTDASDHWWAAVLTKITPNGEEP-CRYCSGLFQENEAIRWHINEKEFFAI 180
           +P+ ED L++ TDASD +W  VL     +G E  CRY SG F++ E   +H N+KE  A+
Sbjct: 532 LPKPEDHLIIETDASDSFWGGVLKARALDGVELICRYSSGSFKQAEK-NYHSNDKELLAV 590

Query: 181 RKAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVIVK 360
           ++   K+  +L   +FT++ DN     FL+  ++   ++ RL+RWQ     + FD+  ++
Sbjct: 591 KQVITKFSAYLTPVRFTVRTDNKNFTYFLRINLKGDSKQGRLVRWQNWFSKYQFDVEHLE 650

Query: 361 SHENILTDFLTRD 399
             +N+L D LTRD
Sbjct: 651 GVKNVLADCLTRD 663


>ref|YP_006907834.1| polyprotein [Horseradish latent virus] gi|57790326|gb|AAW56089.1|
           polyprotein [Horseradish latent virus]
          Length = 679

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 47/137 (34%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
 Frame = +1

Query: 7   PQDEDDLVLYTDASDHWWAAVLTKI------TPNGEEPCRYCSGLFQENEAIRWHINEKE 168
           P  E+ L++ TDASD++W  +L  I        + E  CRY SG F+  E   +H N+KE
Sbjct: 540 PLPEEKLIIETDASDNYWGGILKAIHIDLSTNESIELVCRYASGSFKPAEQ-NYHSNDKE 598

Query: 169 FFAIRKAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDI 348
             A+ +  +K+ ++L   +F ++ DNT  K FL    +   +  R +RWQ   Q ++FD+
Sbjct: 599 TLAVIRTIQKFSIYLTPVRFLVRTDNTHFKYFLNINYKGDSKMGRNIRWQGWLQNYVFDV 658

Query: 349 VIVKSHENILTDFLTRD 399
             +K   N L DFL+R+
Sbjct: 659 DHIKGTNNCLADFLSRE 675


>ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]
           gi|401620160|gb|AFP95350.1| reverse transcriptase
           [Soybean Putnam virus]
          Length = 699

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
 Frame = +1

Query: 7   PQDEDDLVLYTDASDHWWAAVLTKITPNGEEP--CRYCSGLFQENEAIRWHINEKEFFAI 180
           P+  D L++ TDAS  +W  +L   T N +    CRY SG F+  E + +H NEKE  A+
Sbjct: 565 PKLTDTLIIETDASGSFWGGILKARTENSDSELICRYTSGSFKAAE-LNYHSNEKEILAV 623

Query: 181 RKAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVIVK 360
               KK+  +L   KF ++ DN     FLK  ++   ++ RL+RWQ     ++F++  + 
Sbjct: 624 MNTIKKFTGYLTPVKFLIRTDNKNFTHFLKINLKGDYKQGRLVRWQMWFSRYVFEVEHLS 683

Query: 361 SHENILTDFLTRD 399
             +N+  DFLTR+
Sbjct: 684 GDKNVFADFLTRE 696


>dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
 Frame = +1

Query: 7   PQDEDDLVLYTDASDHWWAAVLTKI----TPNGEEPCRYCSGLFQENEAIRWHINEKEFF 174
           P  E+ L++ TDASD +W  +L  I    + N E  CRY SG F+  E   +H N+KE  
Sbjct: 535 PLPEEKLIIETDASDDYWGGMLKAIQINESANTELICRYASGSFKAAEK-NYHSNDKETL 593

Query: 175 AIRKAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVI 354
           A+    KK+ ++L    F ++ DNT  K+F+    +   +  R +RWQA   ++ FD+  
Sbjct: 594 AVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEH 653

Query: 355 VKSHENILTDFLTRD 399
           +K  +N   DFL+R+
Sbjct: 654 IKGTDNHFADFLSRE 668


>dbj|BAO53624.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
 Frame = +1

Query: 7   PQDEDDLVLYTDASDHWWAAVLTKI----TPNGEEPCRYCSGLFQENEAIRWHINEKEFF 174
           P  E+ L++ TDASD +W  +L  I    + N E  CRY SG F+  E   +H N+KE  
Sbjct: 535 PLPEEKLIIETDASDDYWGGMLKAIKINESTNTELICRYASGSFKAAEK-NYHSNDKETL 593

Query: 175 AIRKAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVI 354
           A+    KK+ ++L    F ++ DNT  K+F+    +   +  R +RWQA   ++ FD+  
Sbjct: 594 AVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEH 653

Query: 355 VKSHENILTDFLTRD 399
           +K  +N   DFL+R+
Sbjct: 654 IKGTDNHFADFLSRE 668


>dbj|BAO53617.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
 Frame = +1

Query: 7   PQDEDDLVLYTDASDHWWAAVLTKI----TPNGEEPCRYCSGLFQENEAIRWHINEKEFF 174
           P  E+ L++ TDASD +W  +L  I    + N E  CRY SG F+  E   +H N+KE  
Sbjct: 535 PLPEEKLIIETDASDDYWGGMLKAIKINESTNTELICRYASGSFKAAEK-NYHSNDKETL 593

Query: 175 AIRKAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVI 354
           A+    KK+ ++L    F ++ DNT  K+F+    +   +  R +RWQA   ++ FD+  
Sbjct: 594 AVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEH 653

Query: 355 VKSHENILTDFLTRD 399
           +K  +N   DFL+R+
Sbjct: 654 IKGTDNHFADFLSRE 668


>dbj|BAO53505.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
 Frame = +1

Query: 7   PQDEDDLVLYTDASDHWWAAVLTKIT----PNGEEPCRYCSGLFQENEAIRWHINEKEFF 174
           P  E+ L++ TDASD +W  +L  I      N E  CRY SG F+  E   +H N+KE  
Sbjct: 535 PLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEK-NYHSNDKETL 593

Query: 175 AIRKAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVI 354
           A+    KK+ ++L    F ++ DNT  K+F+    +   +  R +RWQA   ++ FD+  
Sbjct: 594 AVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEH 653

Query: 355 VKSHENILTDFLTRD 399
           +K  +N   DFL+R+
Sbjct: 654 IKGTDNYFADFLSRE 668


>dbj|BAO53435.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
 Frame = +1

Query: 7   PQDEDDLVLYTDASDHWWAAVLTKIT----PNGEEPCRYCSGLFQENEAIRWHINEKEFF 174
           P  E+ L++ TDASD++W  +L  I      N E  CRY SG F+  E   +H N+KE  
Sbjct: 535 PLPEEKLIIETDASDNYWGGMLKAIKINEGTNTELICRYASGSFKAAEK-NYHSNDKETL 593

Query: 175 AIRKAFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVI 354
           A+    KK+ ++L    F ++ DNT  K+F+    +   +  R +RWQA   ++ FD+  
Sbjct: 594 AVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEH 653

Query: 355 VKSHENILTDFLTRD 399
           +K  +N   DFL+R+
Sbjct: 654 IKGTDNHFADFLSRE 668


>ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
           Reverse transcriptase] [Carnation etched ring virus]
           gi|130593|sp|P05400.1|POL_CERV RecName: Full=Enzymatic
           polyprotein; Includes: RecName: Full=Aspartic protease;
           Includes: RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase gi|58863|emb|CAA28360.1|
           unnamed protein product [Carnation etched ring virus]
           gi|225356|prf||1301227E ORF 5
          Length = 659

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 43/128 (33%), Positives = 70/128 (54%)
 Frame = +1

Query: 7   PQDEDDLVLYTDASDHWWAAVLTKITPNGEEPCRYCSGLFQENEAIRWHINEKEFFAIRK 186
           P+  D LV+ TDAS+ +W  +L  I  + E  CRY SG F+  E   +H NEKE  A+ +
Sbjct: 524 PEPNDKLVIETDASEEFWGGILKAIHNSHEYICRYASGSFKAAER-NYHSNEKELLAVIR 582

Query: 187 AFKKWPLFLLAKKFTLKVDNTQAKAFLKNKIESKPEKARLLRWQAECQYFIFDIVIVKSH 366
             KK+ ++L   +F ++ DN     F+   ++   ++ RL+RWQ     + FD+  +   
Sbjct: 583 VIKKFSIYLTPSRFLIRTDNKNFTHFVNINLKGDRKQGRLVRWQMWLSQYDFDVEHIAGT 642

Query: 367 ENILTDFL 390
           +N+  DFL
Sbjct: 643 KNVFADFL 650