BLASTX nr result

ID: Mentha24_contig00006616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00006616
         (1613 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004507627.1| PREDICTED: F-box protein CPR30-like isoform ...    64   1e-07
ref|XP_006424279.1| hypothetical protein CICLE_v10030335mg [Citr...    60   2e-06
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    59   6e-06

>ref|XP_004507627.1| PREDICTED: F-box protein CPR30-like isoform X1 [Cicer arietinum]
          Length = 400

 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 68/266 (25%), Positives = 112/266 (42%), Gaps = 18/266 (6%)
 Frame = +2

Query: 431  GLGYDPISDDYKVIRI------HDPA--STAEVYSLKTDSCWKLITGPGYDIDMGPSCGL 586
            G GYD  SDDYK++ I      H+ +  S   VY+++TD  WK +    Y +  G + G+
Sbjct: 152  GFGYDSFSDDYKLVSISYFVDLHNRSFDSQVRVYTMRTD-VWKNVPSMPYALCCGRTMGV 210

Query: 587  YLDGRCYWTVISYTPGVGVRDFIISFDFTHETFSXXXXXXXXXXXXXXXXXXXXXXXXEF 766
            ++ G  +W V++        D I++FD   E F                           
Sbjct: 211  FVSGSIHW-VVTRNVEPDQSDLIVAFDLRFEIFREIELPTTV------------------ 251

Query: 767  DREFKVDLFDCDGYLGVVGYKRLVDHENRRAKHFELWVCKCRGGASPWARLFS------V 928
            D +F++++    G L V+        ENR ++ F +WV +  G    W +LF+      V
Sbjct: 252  DGKFEMEVAVFGGLLCVI--------ENRGSEGFNVWVMREYGSGDSWCKLFTVEQPRDV 303

Query: 929  ILLDAERPLGLS-DG-RFLFVEGNSSCGHAHLMVYD--WVNEELREHDIYAVPPIRLLLL 1096
             L+   +PLG S DG + LF +        +L   +  WV        +  V  +  L+ 
Sbjct: 304  KLIKCLKPLGYSRDGDKVLFEQDRGKLCWYNLQSKELSWVRISGMSKSVEGVVCVGSLVP 363

Query: 1097 PYVENRVVLPDAKPLINGAQEKALKR 1174
            P + NR V    + L  G ++K  K+
Sbjct: 364  PNLMNRSVHSKIQKL--GEEKKNKKK 387


>ref|XP_006424279.1| hypothetical protein CICLE_v10030335mg [Citrus clementina]
           gi|557526213|gb|ESR37519.1| hypothetical protein
           CICLE_v10030335mg [Citrus clementina]
          Length = 407

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 12/215 (5%)
 Frame = +2

Query: 65  HLSQLRTQIFRCLRHSRCLRSTAQESYFYKVG*GRIFRMDRLVLKYSIGGIEHLSFLSPP 244
           H  +  T +   L H+ C  ST++ES++     G++F          IG ++  +  S  
Sbjct: 47  HSVETNTNLNLILTHTVCPVSTSEESWY-----GQLF----------IGSLDTTNTSSLE 91

Query: 245 HMSPKGTITLPFNDEDDQTGG---SSCKGLFYFDNFDGKSAICNXXXXXXXXXXPSHPDH 415
              P   I  PF D +  T      SC GL    N  G  A+ N                
Sbjct: 92  --VPLRKIDQPFTDWEQGTDTPFIGSCIGLIALRNSSGSIAVHNPSTKENYHITSFWLGE 149

Query: 416 FNS----CSGLGYDPISDDYKVIRIHDPASTAE-----VYSLKTDSCWKLITGPGYDIDM 568
           F+     C G GY+P+ DDYK++R+       E     VYS K     +  T   + +  
Sbjct: 150 FDVKDDVCDGFGYNPVDDDYKLVRMIQRRGNIERTEIRVYSFKEGYALEYETEKPFYLGS 209

Query: 569 GPSCGLYLDGRCYWTVISYTPGVGVRDFIISFDFT 673
             +   + +GR YW V S  P   V+D I+SFD +
Sbjct: 210 SCADACFSNGRLYWLVAS-GPQEDVQDLILSFDLS 243


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 14/192 (7%)
 Frame = +2

Query: 431 GLGYDPISDDYKVIRI------HDPA--STAEVYSLKTDSCWKLITGPGYDIDMGPSCGL 586
           G GYD  +DDYK++ I      H+ +  S  ++Y+++TD  WK +    Y +    + G+
Sbjct: 144 GFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTD-VWKTLPSMPYALCCARTMGV 202

Query: 587 YLDGRCYWTVISYTPGVGVRDFIISFDFTHETFSXXXXXXXXXXXXXXXXXXXXXXXXEF 766
           ++ G  +W V++       RD I++FD   E F                           
Sbjct: 203 FVSGALHW-VVTRDLEPESRDLIVAFDLRFEVFREVALPGTV------------------ 243

Query: 767 DREFKVDLFDCDGYLGVVGYKRLVDHENRRAKHFELWVCKCRGGASPWARLFS------V 928
           D +F +D+    G L ++        ENR +  F++WV +  G    W ++F+      V
Sbjct: 244 DGKFDMDVALLRGMLCII--------ENRGSDGFDVWVMREYGSHDSWCKMFTVGQPRDV 295

Query: 929 ILLDAERPLGLS 964
            L+ + +PLG S
Sbjct: 296 KLMKSLKPLGYS 307


Top