BLASTX nr result

ID: Mentha24_contig00006080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00006080
         (403 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44362.1| hypothetical protein MIMGU_mgv1a011854mg [Mimulus...    91   2e-16
ref|XP_006473555.1| PREDICTED: protein TIC 20-I, chloroplastic-l...    58   2e-06
ref|XP_006435058.1| hypothetical protein CICLE_v10002148mg [Citr...    57   3e-06

>gb|EYU44362.1| hypothetical protein MIMGU_mgv1a011854mg [Mimulus guttatus]
          Length = 268

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 56/106 (52%), Positives = 71/106 (66%), Gaps = 3/106 (2%)
 Frame = -1

Query: 310 MILSGSCLNSGVSSLLPYNRNPCNFKTCNSRISSIHPTHKRVVPSNHRSSIAP---LPIT 140
           MILSG    SGV   LPY+R  C+F++ NS IS I     +VV    RSS  P   +   
Sbjct: 1   MILSGC---SGVFHSLPYSRKSCSFRSYNSSISDI----PKVVSFYDRSSCIPHLQIKSP 53

Query: 139 ASLGIQNFHLSAASSPLLHGEQGSLFHTIPKFPRRHNLRTLTPRAA 2
           ASLG+ +FHLS+AS+PLLHGEQGSL HTIPKFP R   ++L+P+A+
Sbjct: 54  ASLGLHHFHLSSASTPLLHGEQGSLSHTIPKFPIRPR-QSLSPKAS 98


>ref|XP_006473555.1| PREDICTED: protein TIC 20-I, chloroplastic-like isoform X1 [Citrus
           sinensis] gi|568839153|ref|XP_006473556.1| PREDICTED:
           protein TIC 20-I, chloroplastic-like isoform X2 [Citrus
           sinensis]
          Length = 272

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
 Frame = -1

Query: 310 MILSGSCLNSGVSSLLPYNRNPCNFKTCNSRISSI--HPTHKRVVPSNHRSSIAP---LP 146
           MIL+G    SG    +P N N CN +   S  +SI   PTH   + +  RSS      + 
Sbjct: 1   MILNGYTTLSGC---VPTNSNKCNVQQNRSVFASILGPPTHSAGLST--RSSWGTHHWVG 55

Query: 145 ITASLGIQNFHLSAASSPLLHGEQGSLFHTIPKFPRRHNLRTLTPRAA 2
            ++S G    HLSAAS+PLL GEQGSL HTIP  P       L+PRA+
Sbjct: 56  SSSSGGFPVLHLSAASTPLLSGEQGSLAHTIPSLPMSRRSH-LSPRAS 102


>ref|XP_006435058.1| hypothetical protein CICLE_v10002148mg [Citrus clementina]
           gi|567885001|ref|XP_006435059.1| hypothetical protein
           CICLE_v10002148mg [Citrus clementina]
           gi|557537180|gb|ESR48298.1| hypothetical protein
           CICLE_v10002148mg [Citrus clementina]
           gi|557537181|gb|ESR48299.1| hypothetical protein
           CICLE_v10002148mg [Citrus clementina]
          Length = 272

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 46/108 (42%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
 Frame = -1

Query: 310 MILSGSCLNSGVSSLLPYNRNPCNFKTCNSRISSI--HPTHKRVVPSNHRSSIAP---LP 146
           MIL+G    SG    +P N N CN +   S  +SI   PTH   + +  RSS      + 
Sbjct: 1   MILNGFTTLSGC---VPTNSNKCNVQQNRSVFASILGSPTHSAGLST--RSSWGTHHWVG 55

Query: 145 ITASLGIQNFHLSAASSPLLHGEQGSLFHTIPKFPRRHNLRTLTPRAA 2
             +S G    HLSAAS+PLL GEQGSL HTIP  P       L+PRA+
Sbjct: 56  SWSSGGFPVLHLSAASTPLLSGEQGSLAHTIPSLPMSRRSH-LSPRAS 102


Top