BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00004461
         (353 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU18650.1| hypothetical protein MIMGU_mgv1a0134841mg, partia...   174   9e-42
ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, I...   169   5e-40
ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citr...   168   8e-40
gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea]       165   5e-39
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri...   164   9e-39
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ...   164   1e-38
ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phas...   162   5e-38
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I...   162   6e-38
gb|AFK43162.1| unknown [Medicago truncatula]                          162   6e-38
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin...   161   8e-38
emb|CBI30093.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...   159   3e-37
ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, I...   159   4e-37
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub...   158   9e-37
ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prun...   157   1e-36
ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I...   157   1e-36
ref|XP_006605207.1| PREDICTED: DNA-directed RNA polymerase V sub...   155   4e-36
ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V sub...   155   4e-36
ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit famil...   155   4e-36
ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, I...   155   6e-36

>gb|EYU18650.1| hypothetical protein MIMGU_mgv1a0134841mg, partial [Mimulus
           guttatus]
          Length = 138

 Score =  174 bits (442), Expect = 9e-42
 Identities = 90/117 (76%), Positives = 104/117 (88%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R I ++IV +D LS L+LV+Q K+TSQA KAVE   FKVEIFQI DLLVN+TKHE+KPKH
Sbjct: 17  RAIAAQIVNKDSLSGLILVVQNKMTSQALKAVELFSFKVEIFQIADLLVNVTKHEMKPKH 76

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           QVLT +EK++LLK+YSI+EKQLPRMLQKDAIARYYG+EKGQVVKVTY GELTQLHVT
Sbjct: 77  QVLTNEEKQNLLKKYSIDEKQLPRMLQKDAIARYYGMEKGQVVKVTYGGELTQLHVT 133


>ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cicer arietinum]
          Length = 244

 Score =  169 bits (427), Expect = 5e-40
 Identities = 87/117 (74%), Positives = 103/117 (88%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R I  +IV +D L+ L+L++Q +ITSQA KAV  L FKVEIFQITDLLVNITKH LKPKH
Sbjct: 123 RNIAGQIVNRDTLTGLILIVQSQITSQALKAVNLLSFKVEIFQITDLLVNITKHVLKPKH 182

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           QVLT K+K++LLK+Y+I+EKQLPRMLQ DAIARYYGLE+GQVVKVTYTGE+TQ+HVT
Sbjct: 183 QVLTDKQKKNLLKKYNIQEKQLPRMLQTDAIARYYGLERGQVVKVTYTGEITQMHVT 239


>ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
           gi|568879109|ref|XP_006492520.1| PREDICTED: DNA-directed
           RNA polymerase V subunit 5A-like isoform X1 [Citrus
           sinensis] gi|557544341|gb|ESR55319.1| hypothetical
           protein CICLE_v10021999mg [Citrus clementina]
          Length = 236

 Score =  168 bits (425), Expect = 8e-40
 Identities = 87/117 (74%), Positives = 104/117 (88%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R I+S+IV +D L+ L+L+LQ +ITSQA+KAV    FKVE+FQITDLLVNITKH LKPKH
Sbjct: 115 RSIISQIVNRDTLTGLILILQNQITSQATKAVGLFQFKVEMFQITDLLVNITKHVLKPKH 174

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           QVLT +EKE LLK+YSIEEKQLPRML+KDAIA+YYGLE+GQVVKVTY+GE+T+ HVT
Sbjct: 175 QVLTDQEKEKLLKKYSIEEKQLPRMLKKDAIAQYYGLERGQVVKVTYSGEITESHVT 231


>gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea]
          Length = 241

 Score =  165 bits (418), Expect = 5e-39
 Identities = 91/128 (71%), Positives = 100/128 (78%), Gaps = 12/128 (9%)
 Frame = -1

Query: 353 RGILSRIVQDG-LSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R I   +  +G +S L+LV Q KITSQA KAV  L FKVEIFQITDLLVNITKH+LKPKH
Sbjct: 109 RAIAGDVYNNGTISSLILVAQSKITSQALKAVNILKFKVEIFQITDLLVNITKHDLKPKH 168

Query: 176 QVLTAKEKEDLLKQYSIEEKQ-----------LPRMLQKDAIARYYGLEKGQVVKVTYTG 30
           Q+L+A+EK DLL +YSIEEKQ           LPRMLQKDAIARYYGLEKGQVVKVTY G
Sbjct: 169 QILSAEEKADLLSKYSIEEKQASKSKKASEAFLPRMLQKDAIARYYGLEKGQVVKVTYGG 228

Query: 29  ELTQLHVT 6
           ELTQLHVT
Sbjct: 229 ELTQLHVT 236


>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 238

 Score =  164 bits (416), Expect = 9e-39
 Identities = 85/117 (72%), Positives = 100/117 (85%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R I  +IV +D L+ L+LVLQ +IT+QA KAV+   FKVE+FQITDLLVNITKH LKPKH
Sbjct: 117 RAIAGQIVNKDSLTGLILVLQNQITNQAMKAVDLFKFKVEMFQITDLLVNITKHVLKPKH 176

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           QVLT +EK+ LLK Y IEEKQLPR+L+KDAIARYYGLEKGQVVKVTY+GE+T+ HVT
Sbjct: 177 QVLTDREKQKLLKDYCIEEKQLPRLLRKDAIARYYGLEKGQVVKVTYSGEITESHVT 233


>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|124359979|gb|ABN07995.1| RNA
           polymerase subunit, RPB5; RNA polymerase Rpb5,
           N-terminal [Medicago truncatula]
           gi|355500048|gb|AES81251.1| DNA-directed RNA polymerases
           I, II, and III subunit RPABC1 [Medicago truncatula]
          Length = 248

 Score =  164 bits (415), Expect = 1e-38
 Identities = 84/117 (71%), Positives = 101/117 (86%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R I  +IV ++ L+ L+L++Q +ITSQA KAV  L FKVEIFQITDLLVN TKH LKPKH
Sbjct: 127 RDIAGQIVNRESLTGLILIVQNQITSQALKAVNLLSFKVEIFQITDLLVNATKHVLKPKH 186

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           QVLT K+K++LLK+Y I+EKQLPRMLQ DAIARYYGL++GQVVKVTYTGE+TQ+HVT
Sbjct: 187 QVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIARYYGLQRGQVVKVTYTGEITQMHVT 243


>ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phaseolus vulgaris]
           gi|561035580|gb|ESW34110.1| hypothetical protein
           PHAVU_001G125200g [Phaseolus vulgaris]
          Length = 242

 Score =  162 bits (410), Expect = 5e-38
 Identities = 83/117 (70%), Positives = 101/117 (86%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R I  +IV +D LS L+L+++  +TSQA KAV    FKVEIFQITDLLVNITKH LKPKH
Sbjct: 121 RNIAGQIVNRDTLSGLILIVENHVTSQALKAVGLFSFKVEIFQITDLLVNITKHVLKPKH 180

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           QVLT ++K++LLK+++IEEKQLPRMLQ DAIARYYGLE+GQVVKVTY+GE+TQ+HVT
Sbjct: 181 QVLTDRQKKNLLKKFNIEEKQLPRMLQTDAIARYYGLERGQVVKVTYSGEITQMHVT 237


>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
           gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           [Cucumis sativus]
          Length = 227

 Score =  162 bits (409), Expect = 6e-38
 Identities = 83/117 (70%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R I  +I  +D L  L+L++Q +IT+QA KAVE   FKVEIFQITDLLVNITKH LKP H
Sbjct: 106 RNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNH 165

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           QVLT +EK+ LLKQYSIEEKQLPRML+ DAIARYYGLEKGQVVKVTY G++T+ H+T
Sbjct: 166 QVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHIT 222


>gb|AFK43162.1| unknown [Medicago truncatula]
          Length = 248

 Score =  162 bits (409), Expect = 6e-38
 Identities = 83/117 (70%), Positives = 100/117 (85%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R I  +IV ++ L+ L+L++Q +ITSQA KAV  L FKVEI QITDLLVN TKH LKPKH
Sbjct: 127 RDIAGQIVNRESLTGLILIVQNQITSQALKAVNLLSFKVEILQITDLLVNATKHVLKPKH 186

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           QVLT K+K++LLK+Y I+EKQLPRMLQ DAIARYYGL++GQVVKVTYTGE+TQ+HVT
Sbjct: 187 QVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIARYYGLQRGQVVKVTYTGEITQMHVT 243


>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
           gi|255627335|gb|ACU14012.1| unknown [Glycine max]
          Length = 237

 Score =  161 bits (408), Expect = 8e-38
 Identities = 82/110 (74%), Positives = 96/110 (87%)
 Frame = -1

Query: 335 IVQDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKHQVLTAKE 156
           I +D L+ L+L+++  ITSQA KAV    FKVEIFQITDLLVNITKH LKPKHQVLT K+
Sbjct: 123 INRDTLTGLILIVENHITSQALKAVNLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQ 182

Query: 155 KEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           K +LLK+Y+IEEKQLPRMLQ DAIARYYGLE+GQVVKVTY+GE+TQ+HVT
Sbjct: 183 KINLLKKYNIEEKQLPRMLQTDAIARYYGLERGQVVKVTYSGEVTQMHVT 232


>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  159 bits (403), Expect = 3e-37
 Identities = 85/117 (72%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R I ++IV +D LSKL+LVLQ  ITSQA KAV+   F+VE FQITDLLVNITKH LKPKH
Sbjct: 209 RSIATQIVNKDSLSKLILVLQNHITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKH 268

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           +VLT +EK  LLK+YS+ EKQLPRMLQ+DAIARYYGLEKGQVVKV Y GE+T  HVT
Sbjct: 269 RVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVT 325


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 229

 Score =  159 bits (403), Expect = 3e-37
 Identities = 85/117 (72%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R I ++IV +D LSKL+LVLQ  ITSQA KAV+   F+VE FQITDLLVNITKH LKPKH
Sbjct: 108 RSIATQIVNKDSLSKLILVLQNHITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKH 167

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           +VLT +EK  LLK+YS+ EKQLPRMLQ+DAIARYYGLEKGQVVKV Y GE+T  HVT
Sbjct: 168 RVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVT 224


>ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like isoform 1 [Fragaria vesca subsp. vesca]
          Length = 225

 Score =  159 bits (402), Expect = 4e-37
 Identities = 81/117 (69%), Positives = 102/117 (87%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           RG+ S+I  +D LS L+L+LQG+ITSQA K ++  PFKVEIFQITDLLVNITKH LKP+H
Sbjct: 104 RGLHSQIANKDTLSGLILILQGQITSQALKTLDLYPFKVEIFQITDLLVNITKHVLKPQH 163

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           QVLT + K+ LLK+++IEEKQLPR+ QKDAIA+YYGLE+GQVVKVTY+G++T+ HVT
Sbjct: 164 QVLTEQAKQALLKKFNIEEKQLPRISQKDAIAKYYGLERGQVVKVTYSGDITKGHVT 220


>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
           tuberosum]
          Length = 227

 Score =  158 bits (399), Expect = 9e-37
 Identities = 80/117 (68%), Positives = 100/117 (85%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R IL++I+ ++ LS+L+LV+Q ++T+ A KAVE   FKVEIFQITDLLVNITKH LKP+H
Sbjct: 106 RSILTQIMNKESLSRLILVIQNQMTNPAMKAVELFSFKVEIFQITDLLVNITKHVLKPRH 165

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           ++LT  EKE LLK+Y++EEKQLPRM QKDAIARYYGLEKGQVVKVTY+ E+ + HVT
Sbjct: 166 ELLTDTEKEKLLKKYNLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEIIETHVT 222


>ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prunus persica]
           gi|462398060|gb|EMJ03728.1| hypothetical protein
           PRUPE_ppa010980mg [Prunus persica]
          Length = 228

 Score =  157 bits (398), Expect = 1e-36
 Identities = 80/117 (68%), Positives = 98/117 (83%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           RG+ S+I  +D L+ L+L+ Q +ITSQA K +E  PFK EIFQITDLLVNITKH LKPKH
Sbjct: 107 RGLHSQIANKDTLNGLILITQNQITSQALKTMELYPFKTEIFQITDLLVNITKHVLKPKH 166

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
            VLT +EK+ LLK+Y+IEE QLPR+ +KDAIA+YYGLEKGQVVKVTYTG++T+ HVT
Sbjct: 167 HVLTEQEKQKLLKKYNIEENQLPRLSRKDAIAQYYGLEKGQVVKVTYTGDITESHVT 223


>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Solanum lycopersicum]
          Length = 227

 Score =  157 bits (398), Expect = 1e-36
 Identities = 80/117 (68%), Positives = 100/117 (85%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R IL++I+ ++ LS+L+LV+Q ++T+ A KAVE   FKVEIFQITDLLVNITKH LKP+H
Sbjct: 106 RSILTQIMNKESLSRLILVIQNQMTNPALKAVELFSFKVEIFQITDLLVNITKHVLKPRH 165

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           ++LT  EKE LLK+Y++EEKQLPRM QKDAIARYYGLEKGQVVKVTY+ E+ + HVT
Sbjct: 166 ELLTDTEKEKLLKKYNLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEIIETHVT 222


>ref|XP_006605207.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like, partial
           [Glycine max]
          Length = 242

 Score =  155 bits (393), Expect = 4e-36
 Identities = 79/109 (72%), Positives = 94/109 (86%)
 Frame = -1

Query: 335 IVQDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKHQVLTAKE 156
           I +D L+ LML+++  ITSQA KAV    FKVEIFQITDLLVNITKH LKPK QVLT K+
Sbjct: 133 INRDTLTGLMLIVENHITSQALKAVNLFSFKVEIFQITDLLVNITKHVLKPKQQVLTDKQ 192

Query: 155 KEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHV 9
           K++LLK+Y+I+EKQLPRML  DAIARYYGLE+GQVVKVTY+GE+TQ+HV
Sbjct: 193 KKNLLKKYNIKEKQLPRMLLTDAIARYYGLERGQVVKVTYSGEITQMHV 241


>ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
           tuberosum]
          Length = 227

 Score =  155 bits (393), Expect = 4e-36
 Identities = 78/117 (66%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R ILS+I+ ++ LS+L+L+++  +T+ A K VE  PFK EIFQITDLLVNITKH LKPKH
Sbjct: 106 RSILSQIMNKESLSRLILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNITKHVLKPKH 165

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           ++LT  EKE LLK+Y++E+KQLPRM QKDAIARYYGLEKGQVVKVTY  E+ + HVT
Sbjct: 166 ELLTNTEKEQLLKKYNLEDKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEIIETHVT 222


>ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao] gi|508717149|gb|EOY09046.1| Eukaryotic
           rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 228

 Score =  155 bits (393), Expect = 4e-36
 Identities = 78/108 (72%), Positives = 93/108 (86%)
 Frame = -1

Query: 329 QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKHQVLTAKEKE 150
           ++ L+ L+LVLQ  IT+QA KA++   FKVEIFQITDLLVNITKH LKPKHQVLT +EK+
Sbjct: 116 KESLTGLILVLQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPKHQVLTEQEKQ 175

Query: 149 DLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
            LL++YSIEEKQLPR+L+KDAIARYYG E+GQVVKV Y GE+TQ HVT
Sbjct: 176 KLLQKYSIEEKQLPRLLKKDAIARYYGYERGQVVKVMYDGEITQSHVT 223


>ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Solanum lycopersicum]
          Length = 227

 Score =  155 bits (392), Expect = 6e-36
 Identities = 78/117 (66%), Positives = 96/117 (82%), Gaps = 1/117 (0%)
 Frame = -1

Query: 353 RGILSRIV-QDGLSKLMLVLQGKITSQASKAVEALPFKVEIFQITDLLVNITKHELKPKH 177
           R ILS+I+ ++ LS+L+L+++  +T+ A K VE  PFK EIFQITDLLVNITKH LKPKH
Sbjct: 106 RNILSQIMNKESLSRLILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNITKHVLKPKH 165

Query: 176 QVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVT 6
           ++LT  EKE LLK+Y++EEKQLPRM QKDAIARYYGLEKGQVVKVTY  E+ + H T
Sbjct: 166 ELLTNAEKEQLLKKYNLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEIIETHAT 222