BLASTX nr result

ID: Mentha24_contig00004126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00004126
         (624 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007025790.1| F-box/RNI-like superfamily protein, putative...    66   7e-09
ref|XP_002300142.1| F-box family protein [Populus trichocarpa] g...    62   1e-07
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    59   2e-06
emb|CBI23315.3| unnamed protein product [Vitis vinifera]               59   2e-06
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein...    58   2e-06
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]    57   6e-06
emb|CBI23317.3| unnamed protein product [Vitis vinifera]               56   8e-06
ref|XP_006301579.1| hypothetical protein CARUB_v10022017mg, part...    56   1e-05

>ref|XP_007025790.1| F-box/RNI-like superfamily protein, putative [Theobroma cacao]
           gi|508781156|gb|EOY28412.1| F-box/RNI-like superfamily
           protein, putative [Theobroma cacao]
          Length = 528

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
 Frame = +3

Query: 6   SLKMLSIKKVIFYHEIELMASELRIWAPNLETLQIIGTPYGKCL-IMDVSSLTHASLGFY 182
           SL++L +  +   HE E   +E+    PNL++L ++G  Y +   +M VSSL+ A+LGF 
Sbjct: 260 SLEVLVVDGIYDPHEKEDCVTEIS--CPNLQSLSLLGFMYRRTYRLMHVSSLSKANLGFV 317

Query: 183 CTSTCKDDESCPWEDFIGEGLMQIIPAIRHVEKVTLSDWCIKVLGATIDKYMLSPFPNVK 362
            T   KD        +I   L +++  + HVE++T+  WC++VL     K + SP     
Sbjct: 318 MTIDKKDKYDYTKHRYI---LRELLEKLCHVEELTVGTWCLQVLSIWEIKGISSPLSKRS 374

Query: 363 ILSLQGYFKEYE--QILSLLEIFPKLKTLVL 449
            L L     E++   I+SLL+  P LK LVL
Sbjct: 375 CLVLDTEICEWDLPGIVSLLQSSPYLKKLVL 405


>ref|XP_002300142.1| F-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| F-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
 Frame = +3

Query: 72  LRIWAPNLETLQIIGTPY-GKCLIMDVSSLTHASLGFY---CTSTCKDDESCPWEDFIGE 239
           + I  PNL +L + G  +    +++DVSSL  AS+G+    C+  C+ +    W      
Sbjct: 267 ITIKGPNLLSLTLAGYMHRANYMLLDVSSLVEASIGYRMKSCSHGCRSN----WYSAHRS 322

Query: 240 GLMQIIPAIRHVEKVTLSDWCIKVLGATIDKYMLSPFPNVKILSLQGYFKEYE--QILSL 413
            L  ++  ++HVEK+T+  WC++VL  +  K + SP    K L+L     +++   I SL
Sbjct: 323 VLHDLLEKLQHVEKLTIGTWCLQVLSISEVKGLSSPTSACKYLTLNKKINKWDLPGIASL 382

Query: 414 LEIFPKLKTLVLESAKENDLICANHAEISLKLERDLPNSIL 536
           L+  P L+ L +      +L+ +N+ E  LK  + L   I+
Sbjct: 383 LQSSPNLQKLTI------NLMPSNNFEFLLKNAKVLEKMII 417


>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
 Frame = +3

Query: 66  SELRIWAPNLETLQIIGTPYGK-CLIMDVSSLTHASLGFYCTSTCKDDESCPWEDF--IG 236
           S L+I APN+++L I+G  Y K C + +V SL  ASL F         E  P + +    
Sbjct: 291 SVLKISAPNVQSLGILGNMYTKECRVKNVPSLFDASLNFELAM----QEGNPKDHYKLYH 346

Query: 237 EGLMQIIPAIRHVEKVTLSDWCIKVLGATIDKYMLSPFPNVKILSLQGYFKEYE--QILS 410
           + +M+++ ++ HV+ +T+  WCI+VL     K + S   N+K L L  +  +++   I +
Sbjct: 347 KVVMKLLKSVNHVKALTVGTWCIQVLSIFEGKDLSSLLSNLKCLILDTHLNKWDLPGIAN 406

Query: 411 LLEIFPKLKTLVL 449
           LL+    L+T V+
Sbjct: 407 LLQSSTHLETFVI 419


>emb|CBI23315.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
 Frame = +3

Query: 66  SELRIWAPNLETLQIIGTPYGK-CLIMDVSSLTHASLGFYCTSTCKDDESCPWEDF--IG 236
           S L+I APN+++L I+G  Y K C + +V SL  ASL F         E  P + +    
Sbjct: 199 SVLKISAPNVQSLGILGNMYTKECRVKNVPSLFDASLNFELAM----QEGNPKDHYKLYH 254

Query: 237 EGLMQIIPAIRHVEKVTLSDWCIKVLGATIDKYMLSPFPNVKILSLQGYFKEYE--QILS 410
           + +M+++ ++ HV+ +T+  WCI+VL     K + S   N+K L L  +  +++   I +
Sbjct: 255 KVVMKLLKSVNHVKALTVGTWCIQVLSIFEGKDLSSLLSNLKCLILDTHLNKWDLPGIAN 314

Query: 411 LLEIFPKLKTLVL 449
           LL+    L+T V+
Sbjct: 315 LLQSSTHLETFVI 327


>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
           vinifera]
          Length = 665

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 10/190 (5%)
 Frame = +3

Query: 6   SLKMLSIKKVIFYHEIELMASELRIWAPNLETLQIIGTPYGKCLIMDVSSLTHASLGFYC 185
           SLK LSI +    ++ E   + L + APN+ +L++ G     C ++D+SSL +A L    
Sbjct: 246 SLKKLSILEPWAPNDAE-GETVLEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQM 304

Query: 186 TSTCKDDESCPWEDFIGEGLMQIIPAIRHVEKVTLSDWCIKVLGATIDKYMLSPFPNVKI 365
               ++ +    ED+    L +I+  + HVE +T+  WC++VL     K M SP    + 
Sbjct: 305 MHQDRNFQYFS-EDY-SNMLREILKHLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRY 362

Query: 366 LSLQGYFKEYE--QILSLLEIFPKLKTL--------VLESAKENDLICANHAEISLKLER 515
           L L    K+++   I SLL+  P L+ L        VL+     +    N AE    LE 
Sbjct: 363 LILNTLPKKWDLPGIASLLKSSPDLEKLHIDVNPLNVLKKLSILEPWAPNDAEGETVLEV 422

Query: 516 DLPNSILLQL 545
             PN   L+L
Sbjct: 423 SAPNIRSLEL 432


>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
          Length = 526

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
 Frame = +3

Query: 6   SLKMLSIKKVIFYHEIELMASELRIWAPNLETLQIIGTPYGKCLIMDVSSLTHASLGFYC 185
           SLK LSI +    ++ E   + L + APN+ +L++ G     C ++D+SSL +A L    
Sbjct: 246 SLKKLSILEPWAPNDAE-GETVLEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQM 304

Query: 186 TSTCKDDESCPWEDFIGEGLMQIIPAIRHVEKVTLSDWCIKVLGATIDKYMLSPFPNVKI 365
               ++ +    ED+    L +I+  + HVE +T+  WC++VL     K M SP    + 
Sbjct: 305 MHQDRNFQYFS-EDY-SNMLREILKQLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRY 362

Query: 366 LSLQGYFKEYE--QILSLLEIFPKLKTLVLE 452
           L L    K+++   I SLL+  P L+ L ++
Sbjct: 363 LILNTLPKKWDLPGIASLLKSSPDLEKLHID 393


>emb|CBI23317.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
 Frame = +3

Query: 6   SLKMLSIKKVIFYHEIELMASELRIWAPNLETLQIIGTPYGKCLIMDVSSLTHASLGFYC 185
           SLK LSI +    ++ E   + L + APN+ +L++ G     C ++D+SSL +A L    
Sbjct: 246 SLKKLSILEPWAPNDAE-GETVLEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQM 304

Query: 186 TSTCKDDESCPWEDFIGEGLMQIIPAIRHVEKVTLSDWCIKVLGATIDKYMLSPFPNVKI 365
               ++ +    ED+    L +I+  + HVE +T+  WC++VL     K M SP    + 
Sbjct: 305 MHQDRNFQYFS-EDY-SNMLREILKHLSHVENLTVGTWCLEVLSVLEMKSMPSPLSKHRY 362

Query: 366 LSLQGYFKEYE--QILSLLEIFPKLKTLVLE 452
           L L    K+++   I SLL+  P L+ L ++
Sbjct: 363 LILNTLPKKWDLPGIASLLKSSPDLEKLHID 393


>ref|XP_006301579.1| hypothetical protein CARUB_v10022017mg, partial [Capsella rubella]
           gi|482570289|gb|EOA34477.1| hypothetical protein
           CARUB_v10022017mg, partial [Capsella rubella]
          Length = 292

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 39/159 (24%), Positives = 82/159 (51%), Gaps = 3/159 (1%)
 Frame = +3

Query: 9   LKMLSIKKVIFYHEIELMAS---ELRIWAPNLETLQIIGTPYGKCLIMDVSSLTHASLGF 179
           L+ L ++K++    +E+ +    ++RI AP++ +L+ + T    C ++ +SSLT A L  
Sbjct: 147 LRFLDLRKMLHLRTLEIYSHYKVKMRIVAPHIHSLRFV-TSQLPCTLVKISSLTEARLDI 205

Query: 180 YCTSTCKDDESCPWEDFIGEGLMQIIPAIRHVEKVTLSDWCIKVLGATIDKYMLSPFPNV 359
              STC+  ++    DF+ + +++++  ++HVEK+T     +++L     + +  P   V
Sbjct: 206 CINSTCRICKA----DFLQDMMLELLEKLKHVEKLTFGGNFLQILSLAEVREVPFPMLKV 261

Query: 360 KILSLQGYFKEYEQILSLLEIFPKLKTLVLESAKENDLI 476
           K L L+    +Y        + P +K L+  S +   L+
Sbjct: 262 KTLILETVIFQY--------VVPGIKRLLQNSLELKKLM 292


Top