BLASTX nr result

ID: Mentha24_contig00003999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00003999
         (963 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247308.1| PREDICTED: uncharacterized protein LOC101253...    82   4e-13
ref|XP_006355902.1| PREDICTED: uncharacterized protein LOC102590...    81   5e-13
gb|ABI34321.1| RNase H family protein [Solanum demissum]               77   8e-12
ref|XP_004231529.1| PREDICTED: uncharacterized protein LOC101255...    74   9e-11
gb|ADN34114.1| retrotransposon protein [Cucumis melo subsp. melo]      60   2e-06
gb|EPS61257.1| hypothetical protein M569_13541, partial [Genlise...    57   8e-06

>ref|XP_004247308.1| PREDICTED: uncharacterized protein LOC101253719 [Solanum
           lycopersicum]
          Length = 710

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 37/102 (36%), Positives = 55/102 (53%)
 Frame = -1

Query: 945 SRSGIGFNLKGNFIIDCEDEQWDHVIKADPNAKKMRYKSWPYYDDWKELFGKDRANGDVA 766
           SRSG+GF      I+    + WD +IK DPNAK M  K WP + DW+E+FGKDRA G+ A
Sbjct: 377 SRSGLGFQYSDESILVDYPKAWDDLIKVDPNAKSMNLKKWPLFADWEEIFGKDRATGEFA 436

Query: 765 EDVLDGYNQMRDEDDMSNNKGIGVNSNVSLEDLQESEGVADS 640
           E   D   ++   +      G+ V   + + D  ++ G  ++
Sbjct: 437 EGPEDAVEEIERIESQEITNGMSVRFPIDVVDKDDASGTREN 478


>ref|XP_006355902.1| PREDICTED: uncharacterized protein LOC102590554 [Solanum tuberosum]
          Length = 370

 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
 Frame = -1

Query: 963 SLTGILSRSGIGFNLKGNFIIDCEDEQWDHVIKADPNAKKMRYKSWPYYDDWKELFGKDR 784
           S+  + +RSG+GF      II  + + W   IK DP AKKM  K WP + DW+E+FGKDR
Sbjct: 75  SIALLKTRSGLGFQYSDGTIIVDDPKHWIDFIKIDPQAKKMNTKKWPLFKDWEEIFGKDR 134

Query: 783 ANGDVAEDVLDGYNQMRDED--DMSNNKGIGVNSNVSLEDLQESE 655
           A G+  E  LD   +++       SN+  +G   +V L+D +E E
Sbjct: 135 ATGEFVEGPLDATEEIQKSQAPQHSNDMSLGFLIDVDLDDDEEEE 179


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 77.4 bits (189), Expect = 8e-12
 Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 8/206 (3%)
 Frame = -1

Query: 963 SLTGILSRSGIGFNLKGNFIIDCEDEQWDHVIKADPNAKKMRYKSWPYYDDWKELFGKDR 784
           SL+ +  RSG+GF      II+ + ++WD ++K +P A  M  K WP + DW+E FGKDR
Sbjct: 87  SLSLLKGRSGLGFQYSDGTIINDDPKKWDKLLKDEPGASNMNTKKWPLFADWEEFFGKDR 146

Query: 783 ANGDVAEDVLDGYNQMRDEDDMSNNKGIGVNSNVSLEDL--QESEGVADSVSHNNXXXXX 610
           A G+ AE  LD        +D+  ++  G+++++SL  L   + +   D  SH       
Sbjct: 147 ATGEHAEGPLDAV------EDILKSQTSGLSTDMSLGFLINVDDDEYEDEASHGPNAPTE 200

Query: 609 XXXXXXXXKMTTEASEIKQIL------TEIGQKTNERLATLAEGIAYEAELGKARKGAFK 448
                      T+ +E +         T   +K  E   T +  +  E E GK RK   +
Sbjct: 201 EAENTDTRHNFTQTTENEYARGSPCEHTGPSEKQGEYAKTSSSSV-NEKEKGKKRK---R 256

Query: 447 QLENIPNLTINDRFAVCEILGQEQDK 370
            +EN+          V +   + QDK
Sbjct: 257 IVENVNETFFKSMAKVMKNFTESQDK 282


>ref|XP_004231529.1| PREDICTED: uncharacterized protein LOC101255640 [Solanum
           lycopersicum]
          Length = 188

 Score = 73.9 bits (180), Expect = 9e-11
 Identities = 32/61 (52%), Positives = 40/61 (65%)
 Frame = -1

Query: 945 SRSGIGFNLKGNFIIDCEDEQWDHVIKADPNAKKMRYKSWPYYDDWKELFGKDRANGDVA 766
           SRSG+GF      I+    + WD +IK DPNAK M  K WP + DW+E+FGKDRA G+ A
Sbjct: 100 SRSGLGFQYSDGSILVDYPKAWDDLIKVDPNAKSMNLKKWPLFADWEEIFGKDRATGEFA 159

Query: 765 E 763
           E
Sbjct: 160 E 160


>gb|ADN34114.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 657

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 12/211 (5%)
 Frame = -1

Query: 939  SGIGFNLKGNFIIDCED--EQWDHVIKADPNAKKMRYKSWPYYDDWKELFGKDRANGDVA 766
            SG G+N +   I+  ++  + W H     P AK +  KS+ +YD+   +FGKDRA G  A
Sbjct: 444  SGFGWNDEKKCIVAEKEVFDDWSH-----PAAKGLLNKSFVHYDELSYVFGKDRATGGRA 498

Query: 765  EDVLD-GYNQMRDED--------DMSNNKGIGVNSNVSLEDLQESEGVADSVSHNNXXXX 613
            E   D G N     D        D           N+S +DL E+     S   N     
Sbjct: 499  ESFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRN----V 554

Query: 612  XXXXXXXXXKMTTEASEIKQILTEIGQKTNERLATLAE-GIAYEAELGKARKGAFKQLEN 436
                        T++ +I +   E G   NE+L  +AE  I    +  + R+   + LE 
Sbjct: 555  SSGSKRKRPGHATDSGDIVRTAIEYG---NEQLHRIAEWPILQRQDATQTRQEIVRHLEA 611

Query: 435  IPNLTINDRFAVCEILGQEQDKLEIYMGLPD 343
            IP LT+ DR  +  IL +  D ++ ++ +PD
Sbjct: 612  IPELTLMDRCRLMRILMRNVDDMKAFLEVPD 642


>gb|EPS61257.1| hypothetical protein M569_13541, partial [Genlisea aurea]
          Length = 144

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 22/63 (34%), Positives = 40/63 (63%)
 Frame = -1

Query: 951 ILSRSGIGFNLKGNFIIDCEDEQWDHVIKADPNAKKMRYKSWPYYDDWKELFGKDRANGD 772
           ++ +  +GFN     ++   D+ W+ + K  P  KK++ K WPY++ W+ +FGKDRA+G+
Sbjct: 73  LIEKFDVGFNSVTK-MVTATDDLWNEIEKEFPERKKLKMKRWPYFESWRVIFGKDRASGE 131

Query: 771 VAE 763
            A+
Sbjct: 132 DAQ 134


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