BLASTX nr result

ID: Mentha24_contig00003849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00003849
         (511 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU18157.1| hypothetical protein MIMGU_mgv1a0102811mg, partia...   115   5e-24
gb|ACH54085.1| putative chlorophyll b reductase [Nicotiana tabacum]    96   7e-18
gb|EPS61243.1| hypothetical protein M569_13555, partial [Genlise...    84   3e-14
ref|XP_006360473.1| PREDICTED: probable chlorophyll(ide) b reduc...    83   3e-14
ref|XP_004242955.1| PREDICTED: probable chlorophyll(ide) b reduc...    77   2e-12

>gb|EYU18157.1| hypothetical protein MIMGU_mgv1a0102811mg, partial [Mimulus
           guttatus]
          Length = 146

 Score =  115 bits (289), Expect = 5e-24
 Identities = 69/139 (49%), Positives = 81/139 (58%), Gaps = 16/139 (11%)
 Frame = +1

Query: 142 MTTVAKLHLPPLDYHNHTGQPPPSXXXXXXXXXWDPVAVKAXXXXXXXXXXSX------- 300
           MTT+AKL+L PLD H  TGQPPP          +DPV  K           S        
Sbjct: 1   MTTLAKLNLRPLDSHLQTGQPPPRLLFRHRFL-FDPVRAKGRGRFCIQSFRSKEGSGGME 59

Query: 301 ---------CGQVSESSDIGSEKSVNKFVDGIREAVWRVSKPSLRSEGKFTEAMEKLEET 453
                     G++  S+  GS KS+NK V  +R +VWRVSKPSLRS+    EAMEKLE+T
Sbjct: 60  EKNKKIEENRGELMTSNGYGSRKSLNKLVAAVRNSVWRVSKPSLRSQLNSIEAMEKLEDT 119

Query: 454 LFSLSMHIGRYIVTMLSTG 510
           LFS+SMHIGRYIVTMLSTG
Sbjct: 120 LFSISMHIGRYIVTMLSTG 138


>gb|ACH54085.1| putative chlorophyll b reductase [Nicotiana tabacum]
          Length = 506

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 55/128 (42%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
 Frame = +1

Query: 142 MTTVAKLHLPPLD----YHNHTGQPPPSXXXXXXXXX-WDPVAVKAXXXXXXXXXXSXCG 306
           M  VAK+H+  L+    YH  +G PP S          WDP+ VK           S   
Sbjct: 1   MAMVAKVHVSTLECHHYYHRGSGHPPLSGNVLPRVVTTWDPLIVKGRRKIVVQPCRSFKS 60

Query: 307 QVSESSDIGSEKSVNKFVDGIREAVWRVSKPSLRSEGKFTEAMEKLEETLFSLSMHIGRY 486
           +         +K +NK V  IR AVW  SKPSLR+E KF EA+EKLEE LF L++++GRY
Sbjct: 61  EDEYVKGSEIKKPMNKLVGAIRSAVWSCSKPSLRTENKFREAIEKLEERLFLLALYLGRY 120

Query: 487 IVTMLSTG 510
           I+TM+STG
Sbjct: 121 IITMMSTG 128


>gb|EPS61243.1| hypothetical protein M569_13555, partial [Genlisea aurea]
          Length = 434

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 43/55 (78%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
 Frame = +1

Query: 349 NKFVDGIREAVWRVSKPSLRS-EGKFTEAMEKLEETLFSLSMHIGRYIVTMLSTG 510
           NK V  IR+AVW VSKPSLRS E  F EAMEKLEETLF+LS+H+GRYIVTMLSTG
Sbjct: 1   NKLVGSIRKAVWSVSKPSLRSSESAFREAMEKLEETLFALSIHVGRYIVTMLSTG 55


>ref|XP_006360473.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1,
           chloroplastic-like [Solanum tuberosum]
          Length = 486

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
 Frame = +1

Query: 316 ESSDIGSEK--SVNKFVDGIREAVWRVSKPSLRSEGKFTEAMEKLEETLFSLSMHIGRYI 489
           +S D+G  +   VNKFV  IR AVW  SKPSLR+E K  EAME LEE LFSL++++GRYI
Sbjct: 42  KSEDVGPAEYVKVNKFVGAIRSAVWSCSKPSLRTENKLREAMEMLEERLFSLALYVGRYI 101

Query: 490 VTMLSTG 510
           +TM+STG
Sbjct: 102 ITMMSTG 108


>ref|XP_004242955.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1,
           chloroplastic-like [Solanum lycopersicum]
          Length = 484

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 39/66 (59%), Positives = 46/66 (69%)
 Frame = +1

Query: 313 SESSDIGSEKSVNKFVDGIREAVWRVSKPSLRSEGKFTEAMEKLEETLFSLSMHIGRYIV 492
           S  SD      VNK V  IR AVW  SKPSLR+E K  EAME LEE LF L++++GRYI+
Sbjct: 41  SFKSDDAEYVKVNKLVGAIRSAVWSCSKPSLRTENKLREAMEMLEERLFWLALYVGRYII 100

Query: 493 TMLSTG 510
           TM+STG
Sbjct: 101 TMMSTG 106


Top