BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00003051
         (868 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44877.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus...   123   1e-25
gb|EYU44876.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus...   123   1e-25
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      105   2e-20
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-...   104   5e-20
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   103   7e-20
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   103   7e-20
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              103   1e-19
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   102   1e-19
ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao] g...   102   1e-19
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   102   1e-19
gb|AEO45243.1| sigma factor [Nicotiana tabacum]                       102   2e-19
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun...   102   2e-19
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...    99   2e-18
dbj|BAA88922.1| sigma factor [Nicotiana tabacum]                       99   2e-18
ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-...    99   2e-18
gb|EPS67249.1| sigma factor [Genlisea aurea]                           99   2e-18
ref|XP_004241445.1| PREDICTED: RNA polymerase sigma factor sigA-...    99   3e-18
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...    97   8e-18
ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-...    97   8e-18
ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Popu...    96   1e-17

>gb|EYU44877.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus guttatus]
           gi|604346415|gb|EYU44878.1| hypothetical protein
           MIMGU_mgv1a004509mg [Mimulus guttatus]
          Length = 520

 Score =  123 bits (308), Expect = 1e-25
 Identities = 98/261 (37%), Positives = 130/261 (49%), Gaps = 31/261 (11%)
 Frame = -1

Query: 691 LLLGATSYYSDLSAEKLLCSAGD---LPXXXXXXXXXXXXXAKKSRRPHSVKALKD---- 533
           LLL ++ +YSD+S + + CS      +                 +R PHS++ALK+    
Sbjct: 18  LLLSSSLFYSDVSDKFVACSTDSHCPIASSKKPINAKKSSNFFSNRHPHSIRALKEHVDA 77

Query: 532 PHSPCGL----IH--------DNHPDEYLVDALLLLQKSMLEKQWNLAPET---QTLTQX 398
              PC L    IH        D   DEYLVDA+LLLQKS+LEKQWNL+ E+   QT+T  
Sbjct: 78  ASDPCTLEPWLIHGSTLLGEEDETSDEYLVDAVLLLQKSLLEKQWNLSAESSTKQTVTSP 137

Query: 397 XXXK---------SEIDEMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQWSR 245
                         +I ++TCSGTSA                         + +  QW  
Sbjct: 138 RERTPAPARARARKKITQVTCSGTSARSRRMDSRKKAVGRNISN----SHHDNVRKQW-- 191

Query: 244 RKRRSDEDGVDLLLLPPHQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRLK 65
           R   S E       L  + +        +S+ LLTH +VV+LS  IKAGL LE+RRSRLK
Sbjct: 192 RSIISPE-------LLQNSSRRGYVKGVISEDLLTHSQVVQLSQIIKAGLLLEDRRSRLK 244

Query: 64  QRLGCEPSYEQLASSLRMSRA 2
           +RLGCEPS EQLA+SL++SRA
Sbjct: 245 ERLGCEPSDEQLATSLQISRA 265


>gb|EYU44876.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus guttatus]
          Length = 523

 Score =  123 bits (308), Expect = 1e-25
 Identities = 98/261 (37%), Positives = 130/261 (49%), Gaps = 31/261 (11%)
 Frame = -1

Query: 691 LLLGATSYYSDLSAEKLLCSAGD---LPXXXXXXXXXXXXXAKKSRRPHSVKALKD---- 533
           LLL ++ +YSD+S + + CS      +                 +R PHS++ALK+    
Sbjct: 18  LLLSSSLFYSDVSDKFVACSTDSHCPIASSKKPINAKKSSNFFSNRHPHSIRALKEHVDA 77

Query: 532 PHSPCGL----IH--------DNHPDEYLVDALLLLQKSMLEKQWNLAPET---QTLTQX 398
              PC L    IH        D   DEYLVDA+LLLQKS+LEKQWNL+ E+   QT+T  
Sbjct: 78  ASDPCTLEPWLIHGSTLLGEEDETSDEYLVDAVLLLQKSLLEKQWNLSAESSTKQTVTSP 137

Query: 397 XXXK---------SEIDEMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQWSR 245
                         +I ++TCSGTSA                         + +  QW  
Sbjct: 138 RERTPAPARARARKKITQVTCSGTSARSRRMDSRKKAVGRNISN----SHHDNVRKQW-- 191

Query: 244 RKRRSDEDGVDLLLLPPHQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRLK 65
           R   S E       L  + +        +S+ LLTH +VV+LS  IKAGL LE+RRSRLK
Sbjct: 192 RSIISPE-------LLQNSSRRGYVKGVISEDLLTHSQVVQLSQIIKAGLLLEDRRSRLK 244

Query: 64  QRLGCEPSYEQLASSLRMSRA 2
           +RLGCEPS EQLA+SL++SRA
Sbjct: 245 ERLGCEPSDEQLATSLQISRA 265


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  105 bits (263), Expect = 2e-20
 Identities = 95/254 (37%), Positives = 125/254 (49%), Gaps = 26/254 (10%)
 Frame = -1

Query: 688 LLGATSYYSDLSAEKLLCSAG-DLPXXXXXXXXXXXXXAKKS---------RRPHSVKAL 539
           LL ++ YYSDL+ EKL C++   LP              K S         R+  S K+L
Sbjct: 16  LLSSSFYYSDLN-EKLTCTSDHSLPCHHVPSIKNVITAKKSSDYSPSCVSSRKSQSAKSL 74

Query: 538 K-------DPHSPCG-------LIHDNHPDEYLVDALLLLQKSMLEKQWNLAPETQTLTQ 401
           K       DP            L +++  ++  V+ LLLLQKSMLEKQWNL+ E QTLT 
Sbjct: 75  KEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSMLEKQWNLSLE-QTLTA 133

Query: 400 XXXXKSEIDEM--TCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQWSRRKRRSD 227
               + +  +M  TCSGTSA                      D      P  + +  RS 
Sbjct: 134 SPQHEKKSKKMHITCSGTSARRRRMDSRQRVL----------DRHSSATPTSAAKPLRSI 183

Query: 226 EDGVDLLLLPPHQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRLKQRLGCE 47
             G +LL               VS++LLTH EV++LS KI+ GL LEE++SRLK+RLGCE
Sbjct: 184 I-GPELL----QNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCE 238

Query: 46  PSYEQLASSLRMSR 5
           PS +QLA SL+MSR
Sbjct: 239 PSDDQLAVSLKMSR 252


>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
           lycopersicum]
          Length = 509

 Score =  104 bits (259), Expect = 5e-20
 Identities = 97/258 (37%), Positives = 123/258 (47%), Gaps = 30/258 (11%)
 Frame = -1

Query: 688 LLGATSYYSDLSAEKLLCSAG-DLPXXXXXXXXXXXXXAKKS---------RRPHSVKAL 539
           LL ++ YYSDL+ EKL CS+   LP              K S         R+  SVKAL
Sbjct: 16  LLSSSFYYSDLN-EKLSCSSDHSLPCHQVPTVKNVISAKKSSDYSPSCVSSRKLQSVKAL 74

Query: 538 K-------DPHSPCGLIH---------DNHPDEYLVDALLLLQKSMLEKQWNLAPETQTL 407
           K       DP                 D+  D+  V+ LLLLQKSMLEKQWNL+ E +TL
Sbjct: 75  KEHVDIASDPSDVQSWFERFEQLQNESDDEEDDS-VEVLLLLQKSMLEKQWNLSAE-ETL 132

Query: 406 TQXXXXKSEIDEM--TCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQWSRRKRR 233
           T     K    +M   CSGTSA                      D  + ++ Q S     
Sbjct: 133 TASTQRKKNCKKMHIACSGTSARRRRM-----------------DSRQRVLAQKSSATPI 175

Query: 232 SDEDGVDLLLLPP--HQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRLKQR 59
           S    +  +L P              VS++LLTH EV++LS KIK GL +EE++SRLK+R
Sbjct: 176 SATKPLRSILGPDLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKER 235

Query: 58  LGCEPSYEQLASSLRMSR 5
           LGCEPS +QLA SL+MSR
Sbjct: 236 LGCEPSDDQLAVSLKMSR 253


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
           sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Citrus
           sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X3 [Citrus
           sinensis]
          Length = 508

 Score =  103 bits (258), Expect = 7e-20
 Identities = 75/202 (37%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
 Frame = -1

Query: 568 SRRPHSVKALKD-------------PHSPCGLIHDNHPDEYLVDALLLLQKSMLEKQWNL 428
           +R+   +KALK+                P  +  ++   +Y V+ALLLLQKSMLEKQWNL
Sbjct: 66  NRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLEKQWNL 125

Query: 427 APETQTLTQXXXXKSEID-EMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQW 251
           + E   LT     K+     +TCSG SA                            +PQ 
Sbjct: 126 SFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKIL-----------SQNKSVPQQ 174

Query: 250 SRRKRRSDEDGVDLLLLPPHQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSR 71
           +  K+       +L+      +        VS++LLTH EVVRLS KIK GL+L++ + R
Sbjct: 175 NGSKQLRSMISPELI----QNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLR 230

Query: 70  LKQRLGCEPSYEQLASSLRMSR 5
           LK+RLGCEPS EQLA+SLR+SR
Sbjct: 231 LKERLGCEPSMEQLAASLRISR 252


>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
           vinifera]
          Length = 497

 Score =  103 bits (258), Expect = 7e-20
 Identities = 89/255 (34%), Positives = 116/255 (45%), Gaps = 26/255 (10%)
 Frame = -1

Query: 688 LLGATSYYSDLSAEKLLCSAGDL---------PXXXXXXXXXXXXXAKKSRRPHSVKALK 536
           LL ++ +YSD+ AEKL     D+         P                +R   S+KALK
Sbjct: 16  LLASSHHYSDV-AEKLSSYVNDVGFPHHPSPPPKNLISAKKPSNYTPSSNRSIQSMKALK 74

Query: 535 DPHSPCGLIHDNHPD-----------EYLVDALLLLQKSMLEKQWNLAPETQTLTQXXXX 389
           +            PD           EYLV+A LLLQKSMLEKQWNL+ E +   +    
Sbjct: 75  EHVESASAPSTADPDLSSSSSEVEDEEYLVEAFLLLQKSMLEKQWNLSFEEEEEEEEEDM 134

Query: 388 KSEID----EMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQWSRRKRRSDED 221
             +      E+TCSGTSA                                S RKR  +E 
Sbjct: 135 GKKARQKRREVTCSGTSARQRRI---------------------------SGRKRVMNEK 167

Query: 220 GVDLL--LLPPHQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRLKQRLGCE 47
               +   L             VS++LLTH +VV LS+KIKAGL LE+ +SRLK+R+G E
Sbjct: 168 SKSRVRAALGVENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSE 227

Query: 46  PSYEQLASSLRMSRA 2
           P+ EQ+A+SLRMSRA
Sbjct: 228 PTDEQVAASLRMSRA 242


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  103 bits (256), Expect = 1e-19
 Identities = 88/251 (35%), Positives = 115/251 (45%), Gaps = 22/251 (8%)
 Frame = -1

Query: 688 LLGATSYYSDLSAEKLLCSAGDL---------PXXXXXXXXXXXXXAKKSRRPHSVKALK 536
           LL ++ +YSD+ AEKL     D+         P                +R   S+KALK
Sbjct: 87  LLASSHHYSDV-AEKLSSYVNDVGFPHHPSPPPKNLISAKKPSNYTPSSNRSIQSMKALK 145

Query: 535 DPHSPCGLIHDNHPD-----------EYLVDALLLLQKSMLEKQWNLAPETQTLTQXXXX 389
           +            PD           EYLV+A LLLQKSMLEKQWNL+ + +   +    
Sbjct: 146 EHVESASAPSTADPDLSSSSSEVEDEEYLVEAFLLLQKSMLEKQWNLSFKARQKRR---- 201

Query: 388 KSEIDEMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQWSRRKRRSDEDGVDL 209
                E+TCSGTSA                                S RKR  +E     
Sbjct: 202 -----EVTCSGTSARQRRI---------------------------SGRKRVMNEKSKSR 229

Query: 208 L--LLPPHQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRLKQRLGCEPSYE 35
           +   L             VS++LLTH +VV LS+KIKAGL LE+ +SRLK+R+G EP+ E
Sbjct: 230 VRAALGVENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPTDE 289

Query: 34  QLASSLRMSRA 2
           Q+A+SLRMSRA
Sbjct: 290 QVAASLRMSRA 300


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
           gi|557539599|gb|ESR50643.1| hypothetical protein
           CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  102 bits (255), Expect = 1e-19
 Identities = 77/205 (37%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
 Frame = -1

Query: 568 SRRPHSVKALKD-------------PHSPCGLIHDNHPDEYLVDALLLLQKSMLEKQWNL 428
           +R+   +KALK+                P  +  ++   +Y V+ALLLLQKSMLEKQWNL
Sbjct: 66  NRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLEKQWNL 125

Query: 427 APETQTLTQXXXXKSEID-EMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQW 251
           + E   LT     K+     +TCSG SA                        ++ ++ Q 
Sbjct: 126 SFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKIL----------SQNKSVLQQN 175

Query: 250 SRRKRRSDEDGVDLLLLPPHQNXXXXXGYY---VSQQLLTHGEVVRLSHKIKAGLALEER 80
             ++ RS        ++ P        GY    VS++LLTH EVVRLS KIK GL+L++ 
Sbjct: 176 GSKQLRS--------MISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDH 227

Query: 79  RSRLKQRLGCEPSYEQLASSLRMSR 5
           + RLK+RLGCEPS EQLA+SLR+SR
Sbjct: 228 KLRLKERLGCEPSMEQLAASLRISR 252


>ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao]
           gi|508718372|gb|EOY10269.1| Sigma factor A isoform 2
           [Theobroma cacao]
          Length = 450

 Score =  102 bits (255), Expect = 1e-19
 Identities = 82/207 (39%), Positives = 103/207 (49%), Gaps = 18/207 (8%)
 Frame = -1

Query: 568 SRRPHSVKALKDPHSPCGLIHDNHPD--------------EYLVDALLLLQKSMLEKQWN 431
           +RR  S+KALK+      ++    P               +Y V+ALLLLQKSMLEKQW 
Sbjct: 66  NRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSMLEKQWT 125

Query: 430 LAPETQTLTQXXXXKSEID-EMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQ 254
           L+ E    T+    K      +TCSG SA                            I Q
Sbjct: 126 LSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILI-----------QNKSIIQ 174

Query: 253 WSRRKRRSDEDGVDLLLLPPHQNXXXXXGYY---VSQQLLTHGEVVRLSHKIKAGLALEE 83
            + ++ RS        L+ P        GY    VS +LL+H EVVRLS KIKAGL+LEE
Sbjct: 175 PNAKQLRS--------LISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEE 226

Query: 82  RRSRLKQRLGCEPSYEQLASSLRMSRA 2
            R RLK+RLGCEPS EQLA+SL++SRA
Sbjct: 227 HRLRLKERLGCEPSDEQLATSLKISRA 253


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
           gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
           [Theobroma cacao]
          Length = 508

 Score =  102 bits (255), Expect = 1e-19
 Identities = 82/207 (39%), Positives = 103/207 (49%), Gaps = 18/207 (8%)
 Frame = -1

Query: 568 SRRPHSVKALKDPHSPCGLIHDNHPD--------------EYLVDALLLLQKSMLEKQWN 431
           +RR  S+KALK+      ++    P               +Y V+ALLLLQKSMLEKQW 
Sbjct: 66  NRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSMLEKQWT 125

Query: 430 LAPETQTLTQXXXXKSEID-EMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQ 254
           L+ E    T+    K      +TCSG SA                            I Q
Sbjct: 126 LSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILI-----------QNKSIIQ 174

Query: 253 WSRRKRRSDEDGVDLLLLPPHQNXXXXXGYY---VSQQLLTHGEVVRLSHKIKAGLALEE 83
            + ++ RS        L+ P        GY    VS +LL+H EVVRLS KIKAGL+LEE
Sbjct: 175 PNAKQLRS--------LISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEE 226

Query: 82  RRSRLKQRLGCEPSYEQLASSLRMSRA 2
            R RLK+RLGCEPS EQLA+SL++SRA
Sbjct: 227 HRLRLKERLGCEPSDEQLATSLKISRA 253


>gb|AEO45243.1| sigma factor [Nicotiana tabacum]
          Length = 264

 Score =  102 bits (254), Expect = 2e-19
 Identities = 93/254 (36%), Positives = 119/254 (46%), Gaps = 25/254 (9%)
 Frame = -1

Query: 688 LLGATSYYSDLSAEKLLCSAGDLPXXXXXXXXXXXXXAKKS---------RRPHSVKALK 536
           +L ++ YYSDL+ EK   S   LP                S         R+  SVKALK
Sbjct: 13  ILSSSFYYSDLT-EKFCVSDHALPCHHFPSPKNVINAKNSSNYSPSYVSNRKKQSVKALK 71

Query: 535 DPHSPCGLIHDNHPDEYL----------------VDALLLLQKSMLEKQWNLAPETQTLT 404
           + H       D+  + ++                V+ LLLLQKSMLEKQWNL+ E + +T
Sbjct: 72  E-HVDIASNRDSDTEPWVQMFKQLQNGSCSEEDSVEVLLLLQKSMLEKQWNLSAE-KAMT 129

Query: 403 QXXXXKSEIDEMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQWSRRKRRSDE 224
                K ++ + TCSGTSA                     A  D       S  KR    
Sbjct: 130 NENNCKKKM-QTTCSGTSARRRRMDTRKRDLLPKN----SATSD-------SSNKRLRSV 177

Query: 223 DGVDLLLLPPHQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRLKQRLGCEP 44
            G +LL               V Q+LLTH EVV+LS KIK GL LEE++SRLK+RLGCEP
Sbjct: 178 IGPELL----QNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEP 233

Query: 43  SYEQLASSLRMSRA 2
           S +QLA SL++SRA
Sbjct: 234 SDDQLAISLKISRA 247


>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
           gi|462415485|gb|EMJ20222.1| hypothetical protein
           PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  102 bits (253), Expect = 2e-19
 Identities = 73/164 (44%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
 Frame = -1

Query: 490 EYLVDALLLLQKSMLEKQWNLAPETQTLTQXXXXKSEID-EMTCSGTSAXXXXXXXXXXX 314
           EY V+ALLLLQKSMLEKQWNL+ E + L       ++    +TCSG SA           
Sbjct: 108 EYSVEALLLLQKSMLEKQWNLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRK 167

Query: 313 XXXXXXXXGGADDDEMMIPQWSRRKRRSDEDGVDLLLLPPHQNXXXXXGYYVSQQLLTHG 134
                          +M P  ++  R      V   LL  H          +S+ LLTH 
Sbjct: 168 TFNKSTC--------VMHPSTNKPLRAI----VSPELLQNHVKGYVKGV--LSEDLLTHT 213

Query: 133 EVVRLSHKIKAGLALEERRSRLKQRLGCEPSYEQLASSLRMSRA 2
           EVVRLS KIK GL++EE +SRLK+RLGCEPS EQLA+SLR+SRA
Sbjct: 214 EVVRLSKKIKVGLSVEEHKSRLKERLGCEPSDEQLATSLRISRA 257


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
           gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
           polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 95/259 (36%), Positives = 126/259 (48%), Gaps = 30/259 (11%)
 Frame = -1

Query: 688 LLGATSYYSDLSAEKLLCSAGDLPXXXXXXXXXXXXXAKKS------RRPHS-------V 548
           LL ++SYYSD + EK+L  A D                 KS      R P S       +
Sbjct: 16  LLNSSSYYSDFT-EKILY-ANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCI 73

Query: 547 KALKD----PHSPCGLIHDNHPD--------EYLVDALLLLQKSMLEKQWNLAPETQTLT 404
           KA+K+    P SP      N           +Y V+ALLLLQKSMLEKQW+L+ E QT++
Sbjct: 74  KAVKEHVETPSSPIAEPWHNTTSWEDEETELKYTVEALLLLQKSMLEKQWSLSFE-QTVS 132

Query: 403 QXXXXKSEIDEM--TCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQWSRRKRRS 230
                +  + ++  TCSG SA                          M  P+ S++ R +
Sbjct: 133 TDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVF---------MAQPKISKQLRPT 183

Query: 229 DEDGVDLLLLPPHQNXXXXXGYY---VSQQLLTHGEVVRLSHKIKAGLALEERRSRLKQR 59
                    + P        GY    +S++LL+H EVVRLS KIK GL LEER++RLKQR
Sbjct: 184 ---------ISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQR 234

Query: 58  LGCEPSYEQLASSLRMSRA 2
           LGCEPS +QLA SL++SRA
Sbjct: 235 LGCEPSEDQLAISLKISRA 253


>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
          Length = 502

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 81/205 (39%), Positives = 105/205 (51%), Gaps = 16/205 (7%)
 Frame = -1

Query: 568 SRRPHSVKALKDPHSPCGLIHDNHPDEYL----------------VDALLLLQKSMLEKQ 437
           +R+  SVKALK+ H       D+  + ++                V+ LLLLQKSMLEKQ
Sbjct: 61  NRKKQSVKALKE-HVDIASNRDSDTEPWVQMFKQLQNGSCSEEDSVEVLLLLQKSMLEKQ 119

Query: 436 WNLAPETQTLTQXXXXKSEIDEMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIP 257
           WNL+ E + +T     K ++ ++TCSGTSA                     A  D     
Sbjct: 120 WNLSAE-KAMTNENNCKKKM-QITCSGTSARRRRMDTRKRDLLPKN----SATSD----- 168

Query: 256 QWSRRKRRSDEDGVDLLLLPPHQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERR 77
             S  KR     G +LL               V Q+LLTH EVV+LS KIK GL LEE++
Sbjct: 169 --SSSKRLRSVIGPELL----QNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQK 222

Query: 76  SRLKQRLGCEPSYEQLASSLRMSRA 2
           SRLK+RLGCEPS +QLA SL++SRA
Sbjct: 223 SRLKERLGCEPSDDQLAISLKISRA 247


>ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
           [Solanum tuberosum] gi|565361192|ref|XP_006347342.1|
           PREDICTED: RNA polymerase sigma factor sigA-like isoform
           X2 [Solanum tuberosum]
          Length = 505

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 93/259 (35%), Positives = 124/259 (47%), Gaps = 30/259 (11%)
 Frame = -1

Query: 688 LLGATSYYSDLSAEKLLCSAGDLPXXXXXXXXXXXXXAKKS----------RRPHSVKAL 539
           +L ++ YYSDL+ EKL CS GD               AKKS          R+  SVKA+
Sbjct: 15  ILSSSFYYSDLT-EKLACS-GD--HALICNPTWNVINAKKSSNYSTGYVSNRKKQSVKAV 70

Query: 538 KDP------HSPCG--------LIHDNHPDEYLVDALLLLQKSMLEKQWNLAPETQTLTQ 401
           K+       HS           L +++  +E  V+ LLLLQKSMLEKQWNL+ E +TL  
Sbjct: 71  KEHVNIASNHSDVEPMVEMFKKLQNESFSEEDSVEVLLLLQKSMLEKQWNLSAE-KTLAA 129

Query: 400 XXXXKSEID---EMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMI---PQWSRRK 239
               +       ++TCSGTSA                     +    +     P+  + +
Sbjct: 130 FPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKTSAAANSASKRLRSVVGPELQQNR 189

Query: 238 RRSDEDGVDLLLLPPHQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRLKQR 59
            R    GV                  V+Q+LLTH EVV+LS KIK GL LEE+++ LK+R
Sbjct: 190 LRGYMKGV------------------VNQELLTHKEVVQLSKKIKFGLYLEEQKASLKER 231

Query: 58  LGCEPSYEQLASSLRMSRA 2
           LGCEPS +QLA SL+MS A
Sbjct: 232 LGCEPSDDQLAVSLKMSLA 250


>gb|EPS67249.1| sigma factor [Genlisea aurea]
          Length = 517

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 89/258 (34%), Positives = 116/258 (44%), Gaps = 26/258 (10%)
 Frame = -1

Query: 700 KRFLLLGATSYYSDLSAEKLLCSAGDLPXXXXXXXXXXXXXA-----------KKSRRPH 554
           KR LLLG+  +YSDL+ +        LP                         ++++   
Sbjct: 14  KRLLLLGSAFFYSDLAEKHPDPPHCQLPSTRTRTGAVINARRSSNLVADRPRRRRTQSES 73

Query: 553 SVKALKD------PHSPCG----LIHDNHPDEYLVDALLLLQKSMLEKQWNLAPETQTLT 404
           S++ALK       P  PC     +  +    E LVDA+LLLQKSMLEKQWNL P   T  
Sbjct: 74  SIRALKQHRQSTAPTKPCSPESWMAEEESDSENLVDAVLLLQKSMLEKQWNL-PAEMTSG 132

Query: 403 QXXXXKSEIDE-----MTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQWSRRK 239
                 S  D      +T SGTSA                     A   ++ I     RK
Sbjct: 133 GISTADSTTDRHRQISVTGSGTSARNRRLESRKRVIGRRI-----ATSSQLNI-----RK 182

Query: 238 RRSDEDGVDLLLLPPHQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRLKQR 59
           +        L+   P  +         S+ LLTH +VV+LS KIK GL LEE +SRLK +
Sbjct: 183 QGRSITNPALVQSRPRAHLKAAAAA-ASEDLLTHSQVVQLSQKIKTGLMLEEHKSRLKGK 241

Query: 58  LGCEPSYEQLASSLRMSR 5
           LGCEPS EQLA+SLR+S+
Sbjct: 242 LGCEPSEEQLANSLRISK 259


>ref|XP_004241445.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
           lycopersicum]
          Length = 505

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 92/262 (35%), Positives = 121/262 (46%), Gaps = 33/262 (12%)
 Frame = -1

Query: 688 LLGATSYYSDLSAEKLLCSAGDLPXXXXXXXXXXXXXAKKS----------RRPHSVKAL 539
           +L ++ YYSDL+ EKL CS GD               AKKS          R+  SVKA+
Sbjct: 15  ILSSSFYYSDLT-EKLACS-GD--HALICNPTRNVINAKKSSNYSAGYVSNRKKQSVKAV 70

Query: 538 KDPHSPCGLIHDNHPD------------------EYLVDALLLLQKSMLEKQWNLAPET- 416
           K+  +    I  NH D                  E  V+ LLLLQKSMLEKQWNL+ E  
Sbjct: 71  KEHVN----IASNHSDVEPMVEMLKKLQNESCSKEDPVEVLLLLQKSMLEKQWNLSAEKT 126

Query: 415 -QTLTQXXXXKSEIDEMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMI---PQWS 248
            +          +  ++TCSGTSA                     +    +     P+  
Sbjct: 127 LEAFPPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKASAEANSASKRLRSVVGPELQ 186

Query: 247 RRKRRSDEDGVDLLLLPPHQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRSRL 68
           + + R   +GV                  V+Q+LLTH EVV+LS KIK GL LEE+++ L
Sbjct: 187 QNRLRGYMNGV------------------VNQELLTHKEVVQLSKKIKFGLYLEEQKASL 228

Query: 67  KQRLGCEPSYEQLASSLRMSRA 2
           K+RLGCEPS +QLA SL+MS A
Sbjct: 229 KERLGCEPSDDQLAVSLKMSLA 250


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
          Length = 503

 Score = 97.1 bits (240), Expect = 8e-18
 Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
 Frame = -1

Query: 487 YLVDALLLLQKSMLEKQWNLAPETQTLTQXXXXKSEIDEM--TCSGTSAXXXXXXXXXXX 314
           Y V+ALLLLQKSMLEKQWNL+ E + LT+      +  ++  TCSG SA           
Sbjct: 106 YSVEALLLLQKSMLEKQWNLSFEREVLTENSSKGKKCRKVAVTCSGVSARQRRMNTKRKT 165

Query: 313 XXXXXXXXGGADDDEMMI-PQWSRRKRRSDEDGVDLLLLPPHQNXXXXXGYYVSQQLLTH 137
                    GA   +  I P+  + + +    G+                  VS++LL+H
Sbjct: 166 AIKTC----GAMQLKSKISPELLQHRLKGYVKGL------------------VSEELLSH 203

Query: 136 GEVVRLSHKIKAGLALEERRSRLKQRLGCEPSYEQLASSLRMSR 5
            EVV LS KIK GL+LEE +SRLK++LGCEPS +Q+A+SL++SR
Sbjct: 204 AEVVNLSEKIKVGLSLEEHKSRLKEKLGCEPSDDQMATSLKISR 247


>ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
           [Glycine max] gi|571478813|ref|XP_006587676.1|
           PREDICTED: RNA polymerase sigma factor sigA-like isoform
           X2 [Glycine max]
          Length = 503

 Score = 97.1 bits (240), Expect = 8e-18
 Identities = 66/164 (40%), Positives = 90/164 (54%), Gaps = 3/164 (1%)
 Frame = -1

Query: 487 YLVDALLLLQKSMLEKQWNLAPETQTLTQXXXXKSEIDEM--TCSGTSAXXXXXXXXXXX 314
           Y V+ALLLLQKSMLEKQWNL+ E + LT+      +  ++  TCSG SA           
Sbjct: 106 YSVEALLLLQKSMLEKQWNLSFEREVLTEHSSKGKKCKKVAVTCSGVSARQRRMNTKRKT 165

Query: 313 XXXXXXXXGGADDDEMMI-PQWSRRKRRSDEDGVDLLLLPPHQNXXXXXGYYVSQQLLTH 137
                    GA   +  I P+  + + +    G+                  VS++LL+H
Sbjct: 166 AIKTC----GAMQLKSKISPELLQHRLKGYVKGI------------------VSEELLSH 203

Query: 136 GEVVRLSHKIKAGLALEERRSRLKQRLGCEPSYEQLASSLRMSR 5
            EVV LS +IK GL+LEE +SRLK+RLGCEPS +Q+A SL++SR
Sbjct: 204 AEVVNLSERIKVGLSLEEHKSRLKERLGCEPSDDQMAISLKISR 247


>ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Populus trichocarpa]
           gi|550316904|gb|ERP49007.1| hypothetical protein
           POPTR_0019s06020g [Populus trichocarpa]
          Length = 451

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 76/204 (37%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
 Frame = -1

Query: 568 SRRPHSVKALKDPHSPCGL---------IHDNHPDE-----YLVDALLLLQKSMLEKQWN 431
           +R  HS+KALK+                  D+  +E     Y V+ALLLLQKSMLEKQWN
Sbjct: 66  NRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSMLEKQWN 125

Query: 430 LAPE-TQTLTQXXXXKSEIDEMTCSGTSAXXXXXXXXXXXXXXXXXXXGGADDDEMMIPQ 254
           L+ E T +        ++   +TCSG SA                       +    + Q
Sbjct: 126 LSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKN-----------QNQSKFMSQ 174

Query: 253 WSRRKRRSDEDGVDLLLLPPHQNXXXXXGYYVSQQLLTHGEVVRLSHKIKAGLALEERRS 74
            S  K        DLL               VS ++L H EVVRLS  I+AGL+ E+ +S
Sbjct: 175 SSDFKFLRSVSSPDLL----QNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKS 230

Query: 73  RLKQRLGCEPSYEQLASSLRMSRA 2
           RLK+RLGCEPS EQ+A SLR+SRA
Sbjct: 231 RLKERLGCEPSDEQIADSLRISRA 254