BLASTX nr result
ID: Mentha23_contig00048016
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha23_contig00048016 (368 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 61 2e-07 emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 59 9e-07 gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 58 2e-06 gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula] 58 2e-06 gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsi... 56 5e-06 emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] 55 8e-06 emb|CAN66188.1| hypothetical protein VITISV_006046 [Vitis vinifera] 55 8e-06 emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera] 55 8e-06 >emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis] Length = 1131 Score = 60.8 bits (146), Expect = 2e-07 Identities = 26/58 (44%), Positives = 43/58 (74%) Frame = -1 Query: 185 LDQLKEILRLHSSDHPGMQLVAAQLTGSNFLNWSRSIKRALGAKSKLEILDGTLGEPD 12 +D + L +H++DHPG+QL++ +L GSN+ +W+ ++K AL AK+K+ +DGTL PD Sbjct: 8 MDPNQSPLFMHNADHPGLQLISLKLDGSNYDDWNAAMKIALDAKNKIGFVDGTLTRPD 65 >emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana] gi|7268497|emb|CAB78748.1| retrotransposon like protein [Arabidopsis thaliana] Length = 1433 Score = 58.5 bits (140), Expect = 9e-07 Identities = 25/49 (51%), Positives = 37/49 (75%) Frame = -1 Query: 158 LHSSDHPGMQLVAAQLTGSNFLNWSRSIKRALGAKSKLEILDGTLGEPD 12 LHSSDHPG+ +V+ L G+N+ NWS +++ +L AK+KL +DG+L PD Sbjct: 70 LHSSDHPGLNIVSHILDGTNYNNWSIAMRMSLDAKNKLSFVDGSLPRPD 118 >gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana] Length = 1413 Score = 57.8 bits (138), Expect = 2e-06 Identities = 25/60 (41%), Positives = 40/60 (66%) Frame = -1 Query: 191 MELDQLKEILRLHSSDHPGMQLVAAQLTGSNFLNWSRSIKRALGAKSKLEILDGTLGEPD 12 M D + L LH++DHPG+ +V+ QL G+N+ WS ++K AL AK+K+ +DG+ P+ Sbjct: 45 MNPDSVHSPLFLHNADHPGISIVSVQLDGANYNQWSSAMKIALDAKNKIAFIDGSCPRPE 104 >gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula] Length = 1157 Score = 57.8 bits (138), Expect = 2e-06 Identities = 25/49 (51%), Positives = 35/49 (71%) Frame = -1 Query: 158 LHSSDHPGMQLVAAQLTGSNFLNWSRSIKRALGAKSKLEILDGTLGEPD 12 +H SD P ++ +L GSN+L W RS++RALGAK+KL LDG++ PD Sbjct: 17 IHPSDGPSSLIITPKLNGSNYLAWHRSMQRALGAKNKLVFLDGSISVPD 65 >gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsis thaliana] gi|17065314|gb|AAL32811.1| putative retroelement pol polyprotein [Arabidopsis thaliana] gi|21387147|gb|AAM47977.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 411 Score = 56.2 bits (134), Expect = 5e-06 Identities = 27/56 (48%), Positives = 39/56 (69%) Frame = -1 Query: 182 DQLKEILRLHSSDHPGMQLVAAQLTGSNFLNWSRSIKRALGAKSKLEILDGTLGEP 15 D + L LHSSDHPG+ +VA L GSN+ +WS +++ +L AK+KL +DG+L P Sbjct: 61 DNVDNPLILHSSDHPGLSIVAHVLDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRP 116 >emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] Length = 1279 Score = 55.5 bits (132), Expect = 8e-06 Identities = 26/51 (50%), Positives = 32/51 (62%) Frame = -1 Query: 158 LHSSDHPGMQLVAAQLTGSNFLNWSRSIKRALGAKSKLEILDGTLGEPDPT 6 LH SDHPGM LV+ L G N+ W R++ +L AKSKL +DGT P T Sbjct: 20 LHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMPSAT 70 >emb|CAN66188.1| hypothetical protein VITISV_006046 [Vitis vinifera] Length = 225 Score = 55.5 bits (132), Expect = 8e-06 Identities = 26/51 (50%), Positives = 32/51 (62%) Frame = -1 Query: 158 LHSSDHPGMQLVAAQLTGSNFLNWSRSIKRALGAKSKLEILDGTLGEPDPT 6 LH SDHPGM LV+ L G N+ W R++ +L AKSKL +DGT P T Sbjct: 29 LHHSDHPGMVLVSKPLNGENYSTWCRAMTISLNAKSKLGFIDGTTTMPSAT 79 >emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera] Length = 1059 Score = 55.5 bits (132), Expect = 8e-06 Identities = 26/51 (50%), Positives = 32/51 (62%) Frame = -1 Query: 158 LHSSDHPGMQLVAAQLTGSNFLNWSRSIKRALGAKSKLEILDGTLGEPDPT 6 LH SDHPGM LV+ L G N+ W R++ +L AKSKL +DGT P T Sbjct: 20 LHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMPSAT 70