BLASTX nr result
ID: Mentha23_contig00048012
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00048012
(498 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 70 2e-10
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 70 2e-10
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 65 1e-08
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 63 4e-08
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 61 1e-07
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia] 60 3e-07
gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptas... 60 3e-07
ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772... 59 9e-07
ref|XP_004967032.1| PREDICTED: uncharacterized protein LOC101782... 58 1e-06
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624... 57 3e-06
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 57 3e-06
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 57 3e-06
ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752... 57 3e-06
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal... 57 3e-06
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 70.5 bits (171), Expect = 2e-10
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 7/165 (4%)
Frame = +2
Query: 14 LWPLAPKDVIEDQLRMQEKFKEEREKNKSDHTAPPSSLSTTMSSVDPKSSKAASFMPKRP 193
L PL+P V EDQ R++E +++ + KS+ + + S + K
Sbjct: 540 LAPLSPSQVFEDQKRLRETMGKQKGEVKSELEGKEKGQEIEKKKDGREKEREGSDLSKEV 599
Query: 194 SKAIHDATPSSSIAANS-DPVHKNLFISAKEVPKAIQFGKPIVLITFKD------NDTPN 352
+ + + + +++L+I AKE A + G PI+L+T+K+ TP+
Sbjct: 600 KEGVSKKIKCFGERKEAKEKKNESLYIKAKECLNARREGLPIILLTYKEILINFEQLTPS 659
Query: 353 IVIPSVLQPLMEEFFMEEFKDVFPDEIPSDLTPIRGIERQIDFQP 487
+ P ++ F+DVFPD+ P L P+RGIE QIDF P
Sbjct: 660 L-------PNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVP 697
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 70.5 bits (171), Expect = 2e-10
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 7/165 (4%)
Frame = +2
Query: 14 LWPLAPKDVIEDQLRMQEKFKEEREKNKSDHTAPPSSLSTTMSSVDPKSSKAASFMPKRP 193
L PL+P V EDQ R++E +++ + KS+ + + S + K
Sbjct: 540 LAPLSPSQVFEDQKRLRETMGKQKGEVKSELEGKEKGQEIEKKKDGREKEREGSDLSKEV 599
Query: 194 SKAIHDATPSSSIAANS-DPVHKNLFISAKEVPKAIQFGKPIVLITFKD------NDTPN 352
+ + + + +++L+I AKE A + G PI+L+T+K+ TP+
Sbjct: 600 KEGVSKKIKCFGERKEAKEKKNESLYIKAKECLNARREGLPIILLTYKEILINFEQLTPS 659
Query: 353 IVIPSVLQPLMEEFFMEEFKDVFPDEIPSDLTPIRGIERQIDFQP 487
+ P ++ F+DVFPD+ P L P+RGIE QIDF P
Sbjct: 660 L-------PNSVSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVP 697
>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 1004
Score = 64.7 bits (156), Expect = 1e-08
Identities = 46/162 (28%), Positives = 70/162 (43%)
Frame = +2
Query: 8 IRLWPLAPKDVIEDQLRMQEKFKEEREKNKSDHTAPPSSLSTTMSSVDPKSSKAASFMPK 187
I L PL P +V EDQ +M EK+ +ER++ + + K K
Sbjct: 481 INLVPLNPSEVREDQRKMSEKYDQERKEKEKE-----------------KEKNEKKKNDK 523
Query: 188 RPSKAIHDATPSSSIAANSDPVHKNLFISAKEVPKAIQFGKPIVLITFKDNDTPNIVIPS 367
R K ++L ++V +AI +P+ L+ K+ +
Sbjct: 524 REKK-------------------QSLIAKIRDVKEAIVSHQPLYLLFCKEVPLLTTISNE 564
Query: 368 VLQPLMEEFFMEEFKDVFPDEIPSDLTPIRGIERQIDFQPDA 493
P E ++EFK++FP+E+PS L PIRGIE ID P A
Sbjct: 565 KKLPNCIESLLQEFKELFPEEVPSGLPPIRGIEHHIDLNPGA 606
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 63.2 bits (152), Expect = 4e-08
Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Frame = +2
Query: 14 LWPLAPKDVIEDQLRMQEKFKEEREKNKSDHTAPPSSLSTTMSSVDPKSSKAASFMPKRP 193
L PLAPK+V Q++ ++ +E +K K ++ T S K + A +R
Sbjct: 522 LTPLAPKEVYNLQVQSKKLREELAQKAKE-------AMKETTSG---KQNTIAHEKKQRK 571
Query: 194 SKAIHDATPSSSIAANSDPVHKNLFISAKEVPKAIQFGKPIVL---ITFKDNDTPNIVIP 364
D T SS NL ++ +EV +A++ G+ + L I F N + +IP
Sbjct: 572 EGMKKDTTQSSH----------NLLMTKREVEQALRRGEGVFLLYPIDFCLNVIKSEIIP 621
Query: 365 SVLQPLMEEFFMEEFKDVFPDEIPSDLTPIRGIERQIDFQPDA 493
S + L+ EF DVFP+E+P L PIRGIE QID P A
Sbjct: 622 SDVSALLSEF-----ADVFPEELPKGLPPIRGIEHQIDLIPGA 659
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 61.2 bits (147), Expect = 1e-07
Identities = 46/162 (28%), Positives = 71/162 (43%)
Frame = +2
Query: 8 IRLWPLAPKDVIEDQLRMQEKFKEEREKNKSDHTAPPSSLSTTMSSVDPKSSKAASFMPK 187
I L P+ P+ +++D + K K+E KNKS++ M S + K S A +
Sbjct: 623 ITLLPMTPESILKDDINRANKAKQE--KNKSENQIVAKEFEQQMQSNNNKQSSVACEIKL 680
Query: 188 RPSKAIHDATPSSSIAANSDPVHKNLFISAKEVPKAIQFGKPIVLITFKDNDTPNIVIPS 367
+ + +A SD I + K++ + F D P+ + P+
Sbjct: 681 KSA---------CLLATKSD-------IDDLDFSKSVCYAFVCKEALFSFEDVPSSLPPA 724
Query: 368 VLQPLMEEFFMEEFKDVFPDEIPSDLTPIRGIERQIDFQPDA 493
V ++EF DVFP ++P L PIRGIE QID P A
Sbjct: 725 VTN------ILQEFTDVFPQDVPPGLPPIRGIEHQIDLIPGA 760
>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
Length = 1518
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +2
Query: 263 LFISAKEVPKAIQFGKPIVLITFKD-NDTPNIVIPSVLQPLMEEFFMEEFKDVFPDEIPS 439
LF+S + K I+ +P++++ ++ N N V+P+ + PL++ F ++VFPDE+PS
Sbjct: 542 LFLSEAAMIKEIRQAQPVLMLLSREVNQEENTVVPTAVAPLIQRF-----QEVFPDELPS 596
Query: 440 DLTPIRGIERQIDFQPDAV 496
L P+RGIE ID P +V
Sbjct: 597 GLPPLRGIEHHIDLVPGSV 615
>gb|ABD33247.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07
Identities = 54/164 (32%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Frame = +2
Query: 8 IRLWPLAPKDVIEDQLRMQEKFKEEREKNKSDHTAPPSSLSTTMSSVDPKSSKAASFMPK 187
I L PL+PK++ +D+L + K K E+E + KS K S M
Sbjct: 72 ISLLPLSPKEICQDELTL--KLKREKE-------------------IKEKSGK--SIMHA 108
Query: 188 RPSKAIHDATPSSSIAANSDPVHKNLFISAKEVPKAIQFGKPIVLITFKDN--DTPNIVI 361
S HD TP ++LFI V KA+ KPI + D + VI
Sbjct: 109 NESHN-HDPTPRV----------ESLFIREHVVGKALLSRKPIYFLYCNDLCLSASHDVI 157
Query: 362 PSVLQPLMEEFFMEEFKDVFPDEIPSDLTPIRGIERQIDFQPDA 493
PS L + +++F DVFP E+P L P+RGIE ID P A
Sbjct: 158 PSSLN-----YLLKDFADVFPKELPHGLPPLRGIEHHIDLIPSA 196
>ref|XP_004980495.1| PREDICTED: uncharacterized protein LOC101772114 [Setaria italica]
Length = 1246
Score = 58.5 bits (140), Expect = 9e-07
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Frame = +2
Query: 14 LWPLAPKDV-IEDQLRMQEKFKEEREKNKSDHTAPPSSLSTTMSSVDPKSSKAASFMPKR 190
L PL+P+++ D RM+ +EE EK K P +SK +
Sbjct: 528 LVPLSPEEIHASDVARMK---REESEKRKLSEA--------------PNTSKGET---PT 567
Query: 191 PSKAIHDATPSSSIAANSDPVHKNLFISAKEVPKAIQFGKPIVLITFKDNDTPNIVIPSV 370
PS I + S + N + LF+S + + P ++ K+ +PS
Sbjct: 568 PSSHIKPHSTSKQLRQN-----ECLFVSRSALREVKNTTAPFFVLLHKEVLLSTTDLPSS 622
Query: 371 LQPLMEEFFMEEFKDVFPDEIPSDLTPIRGIERQIDFQPDA 493
L ++ + +++FKDVFPDE+P+ L P+RGIE QID P A
Sbjct: 623 LPSVVLDL-LQDFKDVFPDEVPAGLPPLRGIEHQIDLVPGA 662
>ref|XP_004967032.1| PREDICTED: uncharacterized protein LOC101782149 [Setaria italica]
Length = 1054
Score = 58.2 bits (139), Expect = 1e-06
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Frame = +2
Query: 14 LWPLAPKDV-IEDQLRMQEKFKEEREKNKSDHTAPPSSLSTTMSSVDPKSSKA------A 172
L PL+P+++ D RM+ + E R+ +++ +T+ + T S + P S+
Sbjct: 646 LVPLSPEEIHASDVARMKREESENRKLSEAPNTSK-GEIPTPSSHIKPHSTSKQLRQNEC 704
Query: 173 SFMPKRPSKAIHDATPSSSIAANSDPVHKNLFISAKEVPKAIQFGKPIVLITFKDNDTPN 352
F+ + + + + T + +HK + +S +P ++
Sbjct: 705 LFVSRSALREVKNTTTPFFVL-----LHKEVLLSTTNLPSSL------------------ 741
Query: 353 IVIPSVLQPLMEEFFMEEFKDVFPDEIPSDLTPIRGIERQIDFQPDA 493
PSV+ L+++F KDVFPDE+P+ L P+RGIE QID P A
Sbjct: 742 ---PSVVLDLLQDF-----KDVFPDEVPAGLPPLRGIEHQIDLVPGA 780
>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
Length = 1083
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Frame = +2
Query: 158 SSKAASFMPKRPSKAIHDATPSSSIAANSDPVHKNLFISAKEVPKAIQFGKPIVLITFKD 337
+ + + +P P + D +I + NLF EV +A +PIV++ K+
Sbjct: 344 NKRKITLVPLTPRQVYEDQI---NIVERKERQQVNLFAKESEVKRAFFSKQPIVVLLCKE 400
Query: 338 ----NDTPNIVIPSVLQPLMEEFFMEEFKDVFPDEIPSDLTPIRGIERQIDFQP 487
+ N +PS + L++++ DVFP+++P+ L PIRGIE QIDF P
Sbjct: 401 ACLHTNELNFSLPSAIVTLLQDY-----DDVFPNKVPNGLPPIRGIEHQIDFVP 449
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 57.0 bits (136), Expect = 3e-06
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 8/170 (4%)
Frame = +2
Query: 8 IRLWPLAPKDVIEDQLRMQEKFKEEREKNKSD--------HTAPPSSLSTTMSSVDPKSS 163
I L P++P+ +++D + K K++ K+++ H P S S+ S + KS
Sbjct: 639 ITLLPMSPEHIMKDDIARASKAKQDLHKSENQIVAKEFEQHNKPNKSSSSVASEIKLKSG 698
Query: 164 KAASFMPKRPSKAIHDATPSSSIAANSDPVHKNLFISAKEVPKAIQFGKPIVLITFKDND 343
+A SD I+ ++ ++ + + F D
Sbjct: 699 --------------------CLLATKSD-------ITDLDITTSVCYAFVCKEVLFSFED 731
Query: 344 TPNIVIPSVLQPLMEEFFMEEFKDVFPDEIPSDLTPIRGIERQIDFQPDA 493
P+ + P+V+ ++EF DVFP ++P L PIRGIE QID P A
Sbjct: 732 MPSSLPPAVIN------ILQEFADVFPQDVPPGLPPIRGIEHQIDLIPGA 775
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 57.0 bits (136), Expect = 3e-06
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 8/170 (4%)
Frame = +2
Query: 8 IRLWPLAPKDVIEDQLRMQEKFKEEREKNKSD--------HTAPPSSLSTTMSSVDPKSS 163
I L P++P+ +++D + K K++ K+++ H P S S+ S + KS
Sbjct: 636 ITLLPMSPEHIMKDDIARASKAKQDLHKSENQIVAKEFEQHNKPNKSSSSVASEIKLKSG 695
Query: 164 KAASFMPKRPSKAIHDATPSSSIAANSDPVHKNLFISAKEVPKAIQFGKPIVLITFKDND 343
+A SD I+ ++ ++ + + F D
Sbjct: 696 --------------------CLLATKSD-------ITDLDITTSVCYAFVCKEVLFSFED 728
Query: 344 TPNIVIPSVLQPLMEEFFMEEFKDVFPDEIPSDLTPIRGIERQIDFQPDA 493
P+ + P+V+ ++EF DVFP ++P L PIRGIE QID P A
Sbjct: 729 MPSSLPPAVIN------ILQEFADVFPQDVPPGLPPIRGIEHQIDLIPGA 772
>ref|XP_004954917.1| PREDICTED: uncharacterized protein LOC101752491 [Setaria italica]
Length = 1295
Score = 56.6 bits (135), Expect = 3e-06
Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Frame = +2
Query: 14 LWPLAPKDV-IEDQLRMQEKFKEEREKNKSDHTAPPSSLSTTMSSVDPKSSKAASFMPKR 190
L PL+P+++ D RM+ +EE EK K P +SK +
Sbjct: 661 LVPLSPEEIHASDVARMK---REESEKRKLSEA--------------PNTSKGET----- 698
Query: 191 PSKAIHDATPSSSIA--ANSDPVHKNLFISAKEVPKAIQFGKPIVLITFKDNDTPNIVIP 364
TPSS I + S + +N + P + K ++L T + + +P
Sbjct: 699 -------PTPSSHIKPHSTSKQLRQNECLFVSRTPFFVLLHKEVLLSTTDLSSS----LP 747
Query: 365 SVLQPLMEEFFMEEFKDVFPDEIPSDLTPIRGIERQIDFQPDA 493
SV+ L+++F KDVFPDE+P+ L P+RGIE QID P A
Sbjct: 748 SVVLDLLQDF-----KDVFPDEVPAGLPPLRGIEHQIDLVPGA 785
>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
Length = 1215
Score = 56.6 bits (135), Expect = 3e-06
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = +2
Query: 260 NLFISAKEVPKAIQFGKPIVLITFKDNDTPNIVIPSVLQPLMEEFFMEEFKDVFPDEIPS 439
N F + EV A +P++L FK+ T VL M ++++KDVFP++ P
Sbjct: 367 NFFAKSGEVKSAYSSKQPMLLFVFKEALTSLTNFAPVLPSEMTSL-LQDYKDVFPEDNPK 425
Query: 440 DLTPIRGIERQIDFQPDA 493
L PIRGIE QIDF P A
Sbjct: 426 GLPPIRGIEHQIDFVPGA 443