BLASTX nr result

ID: Mentha23_contig00047792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00047792
         (414 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subc...    60   4e-07
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo...    59   5e-07
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G...    59   5e-07
emb|CAE76054.1| B1248C03.13 [Oryza sativa Japonica Group]              58   2e-06
ref|XP_003627545.1| hypothetical protein MTR_8g027350 [Medicago ...    57   2e-06
gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group]      57   3e-06

>gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 358

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +1

Query: 124 GAPAATAIGNPGVGRGNK-TNYGKVL-VCQLCGRTGHVALKCFKRFDVYFTGNEHSNGSG 297
           G P +   G  G GRG      GK+  +CQLCG+ GH  +KC+KRFD  ++G E S    
Sbjct: 195 GGPNSGNRGRGGFGRGGGGRGDGKLKPICQLCGKIGHTVVKCWKRFDTSYSGEEKS---- 250

Query: 298 FQSSNNHQKAFVSNLVGADTGGYGEGDDSWCVDSGATTH 414
                          V A T  YG  D +W +D+GAT H
Sbjct: 251 ---------------VAAATNSYGV-DTNWYIDTGATDH 273


>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
          Length = 499

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/91 (39%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
 Frame = +1

Query: 148 GNPGVGRGNKTNY--GKVLVCQLCGRTGHVALKCFKRFDVYFTGNEHSNGSGFQSSNNHQ 321
           G  G GRG  TN   G    CQLC + GH  +KC+KRFD  FTG E S            
Sbjct: 134 GGQGRGRGGFTNNQGGDHPKCQLCDKLGHTVVKCYKRFDASFTGEEKS------------ 181

Query: 322 KAFVSNLVGADTGGYGEGDDSWCVDSGATTH 414
                    A T  YG G  +W +D+GAT H
Sbjct: 182 -------AAAATSSYGVG-TNWYIDTGATDH 204


>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 572

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/91 (39%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
 Frame = +1

Query: 148 GNPGVGRGNKTNY--GKVLVCQLCGRTGHVALKCFKRFDVYFTGNEHSNGSGFQSSNNHQ 321
           G  G GRG  TN   G    CQLC + GH  +KC+KRFD  FTG E S            
Sbjct: 207 GGQGRGRGGFTNNQGGDHPKCQLCDKLGHTVVKCYKRFDASFTGEEKS------------ 254

Query: 322 KAFVSNLVGADTGGYGEGDDSWCVDSGATTH 414
                    A T  YG G  +W +D+GAT H
Sbjct: 255 -------AAAATSSYGVG-TNWYIDTGATDH 277


>emb|CAE76054.1| B1248C03.13 [Oryza sativa Japonica Group]
          Length = 261

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/97 (36%), Positives = 43/97 (44%)
 Frame = +1

Query: 124 GAPAATAIGNPGVGRGNKTNYGKVLVCQLCGRTGHVALKCFKRFDVYFTGNEHSNGSGFQ 303
           G    +  G P   RG   N  +   CQLCG+ GH  +KC+KRFD  FTG E +      
Sbjct: 162 GGNLGSGRGTPQGSRGGANNQERPK-CQLCGKLGHTVIKCYKRFDTSFTGEEKA------ 214

Query: 304 SSNNHQKAFVSNLVGADTGGYGEGDDSWCVDSGATTH 414
                          A T  YG  D +W VD+GAT H
Sbjct: 215 -------------ANAATTSYGI-DTNWYVDTGATDH 237


>ref|XP_003627545.1| hypothetical protein MTR_8g027350 [Medicago truncatula]
           gi|355521567|gb|AET02021.1| hypothetical protein
           MTR_8g027350 [Medicago truncatula]
          Length = 220

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/89 (37%), Positives = 45/89 (50%)
 Frame = +1

Query: 148 GNPGVGRGNKTNYGKVLVCQLCGRTGHVALKCFKRFDVYFTGNEHSNGSGFQSSNNHQKA 327
           G  G GR N +      VCQ+C RTGH A+ CF RFD  ++G  +SN    +   ++  A
Sbjct: 102 GGRGKGRVNNSKP----VCQVCTRTGHTAISCFYRFDKSYSGTNYSNSENEKQGTHN--A 155

Query: 328 FVSNLVGADTGGYGEGDDSWCVDSGATTH 414
           FV++        Y   D  W  DSGA+ H
Sbjct: 156 FVAS-------PYSSQDYEWYFDSGASNH 177


>gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 760

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/97 (36%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
 Frame = +1

Query: 148 GNPGVGRGNKTNYG--------KVLVCQLCGRTGHVALKCFKRFDVYFTGNEHSNGSGFQ 303
           GNPG G G     G        +   CQLCG+ GH  +KC+KRFD  FTG E +  +   
Sbjct: 175 GNPGGGGGRDAPQGGRGGANNQEWPKCQLCGKLGHTVIKCYKRFDTSFTGEEKAANTA-- 232

Query: 304 SSNNHQKAFVSNLVGADTGGYGEGDDSWCVDSGATTH 414
                            T  YG  D +W VD+GAT H
Sbjct: 233 -----------------TTSYGI-DTNWYVDTGATDH 251


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