BLASTX nr result
ID: Mentha23_contig00047157
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00047157
(599 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU30611.1| hypothetical protein MIMGU_mgv1a020771mg [Mimulus... 300 2e-79
ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containi... 278 1e-72
ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containi... 276 2e-72
gb|EPS65318.1| hypothetical protein M569_09460 [Genlisea aurea] 268 9e-70
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 258 9e-67
ref|XP_007227261.1| hypothetical protein PRUPE_ppa017811mg [Prun... 254 1e-65
ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containi... 251 8e-65
gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis] 246 3e-63
ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containi... 245 8e-63
ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citr... 243 3e-62
ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containi... 243 4e-62
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi... 242 5e-62
ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containi... 234 1e-59
ref|XP_007159689.1| hypothetical protein PHAVU_002G258900g [Phas... 233 2e-59
ref|XP_007044848.1| Pentatricopeptide repeat superfamily protein... 231 2e-58
ref|XP_002312667.1| pentatricopeptide repeat-containing family p... 224 1e-56
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 223 2e-56
ref|NP_172763.1| pentatricopeptide repeat-containing protein [Ar... 209 6e-52
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ... 209 6e-52
ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Caps... 208 8e-52
>gb|EYU30611.1| hypothetical protein MIMGU_mgv1a020771mg [Mimulus guttatus]
Length = 515
Score = 300 bits (768), Expect = 2e-79
Identities = 140/199 (70%), Positives = 165/199 (82%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GIVPDIWAFNIY+ LLC E+LVDDAL +L LMGE+GREPDVVSYTI+IS C++K +DEA
Sbjct: 109 GIVPDIWAFNIYMYLLCSESLVDDALKILGLMGEKGREPDVVSYTIMISGFCRIKLYDEA 168
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+++WK MIKK + PDN+ACRALVLGLC+ KVDLAYELT+GDMR K+ F+ VIYN LICG
Sbjct: 169 IELWKVMIKKGLNPDNEACRALVLGLCDSGKVDLAYELTVGDMREKVSFNVVIYNALICG 228
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FCRVGRIDKAL +K+FM+ NGCEPDL+T+NVLLNYCCN KM+RSGMEPD
Sbjct: 229 FCRVGRIDKALAIKNFMRRNGCEPDLVTHNVLLNYCCNALMLEEAHKLIAKMERSGMEPD 288
Query: 57 SYSYNELLKGFCIVNRIDK 1
YSYNELLKG C +R+DK
Sbjct: 289 IYSYNELLKGLCKASRVDK 307
Score = 89.0 bits (219), Expect = 9e-16
Identities = 57/190 (30%), Positives = 90/190 (47%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G+ PDI+++N L LC + VD A +LL E DVVSY ++SALCK R EA
Sbjct: 284 GMEPDIYSYNELLKGLCKASRVDKAYLLLVDKMEAKGFVDVVSYNTIVSALCKAGRSGEA 343
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+ M +K V PD L+ + +A +L + + +Y ++
Sbjct: 344 YKLLGEMGRKGVAPDVITFTILIDAFLKKGNSVIAKDLLDQMTKMNLFPSLELYTTIVDH 403
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
C+ GRI A + M + G PD+++YN L+ CC +MQ SG+ PD
Sbjct: 404 LCKTGRIKAARGIFHDMVEQGIRPDVVSYNALICGCCRAFEVSEALHLFEQMQSSGVHPD 463
Query: 57 SYSYNELLKG 28
++ +++G
Sbjct: 464 EVTFKLIIRG 473
Score = 87.4 bits (215), Expect = 3e-15
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 3/190 (1%)
Frame = -3
Query: 567 IYLNLLCG---ENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMWKFM 397
IY L+CG +D AL + M G EPD+V++ ++++ C +EA + M
Sbjct: 221 IYNALICGFCRVGRIDKALAIKNFMRRNGCEPDLVTHNVLLNYCCNALMLEEAHKLIAKM 280
Query: 396 IKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRVGRI 217
+ ++PD + L+ GLC+ +VD AY L + M K D V YN ++ C+ GR
Sbjct: 281 ERSGMEPDIYSYNELLKGLCKASRVDKAYLLLVDKMEAKGFVDVVSYNTIVSALCKAGRS 340
Query: 216 DKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSYNEL 37
+A L M G PD+IT+ +L++ +M + + P Y +
Sbjct: 341 GEAYKLLGEMGRKGVAPDVITFTILIDAFLKKGNSVIAKDLLDQMTKMNLFPSLELYTTI 400
Query: 36 LKGFCIVNRI 7
+ C RI
Sbjct: 401 VDHLCKTGRI 410
>ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Solanum lycopersicum]
Length = 511
Score = 278 bits (710), Expect = 1e-72
Identities = 131/199 (65%), Positives = 156/199 (78%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GIVP+ WA+N+YLNLLC ENLVD AL L+R+MGE+GREPDVVSYTIVIS LC++ R D A
Sbjct: 109 GIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNA 168
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
V+MW MI+K ++PDNKAC+ALV GLC KVDLAYELTLG +RG++ F+ IYN LI G
Sbjct: 169 VEMWHTMIRKGLRPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNTEIYNTLING 228
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FCR GRIDKA +K+FMK NGCEPDL+TYNV LNYCCN KM+ G+EPD
Sbjct: 229 FCRAGRIDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEKMEGIGLEPD 288
Query: 57 SYSYNELLKGFCIVNRIDK 1
YSYN+LL+GFC NR+DK
Sbjct: 289 GYSYNQLLRGFCKANRLDK 307
Score = 90.9 bits (224), Expect = 2e-16
Identities = 55/197 (27%), Positives = 89/197 (45%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G PD+ +N++LN C E ++++A+ L+ M G EPD SY ++ CK R D+A
Sbjct: 249 GCEPDLVTYNVFLNYCCNELMLEEAMKLIEKMEGIGLEPDGYSYNQLLRGFCKANRLDKA 308
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+ ++ D + ++ LC+ ++ AY L + KI D V + +LI
Sbjct: 309 YKLMVDKMETKGLVDVVSYNTIIRALCKTDQSKKAYILFKEMEQKKILPDVVTFTILIEA 368
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
+ G A L M G PD + Y +++ C M G+ PD
Sbjct: 369 SLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPD 428
Query: 57 SYSYNELLKGFCIVNRI 7
SYN L+ GFC +R+
Sbjct: 429 VISYNALISGFCKASRV 445
Score = 84.0 bits (206), Expect = 3e-14
Identities = 47/189 (24%), Positives = 84/189 (44%)
Frame = -3
Query: 573 FNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMWKFMI 394
+N +N C +D A + M G EPD+V+Y + ++ C +EA+ + + M
Sbjct: 222 YNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEKME 281
Query: 393 KKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRVGRID 214
++PD + L+ G C+ ++D AY+L + M K D V YN +I C+ +
Sbjct: 282 GIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALCKTDQSK 341
Query: 213 KALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSYNELL 34
KA L M+ PD++T+ +L+ +M G+ PD Y ++
Sbjct: 342 KAYILFKEMEQKKILPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSII 401
Query: 33 KGFCIVNRI 7
C ++
Sbjct: 402 DNLCKTGKL 410
Score = 75.1 bits (183), Expect = 1e-11
Identities = 43/149 (28%), Positives = 75/149 (50%)
Frame = -3
Query: 585 DIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMW 406
D+ ++N + LC + A IL + M ++ PDVV++TI+I A K A +
Sbjct: 323 DVVSYNTIIRALCKTDQSKKAYILFKEMEQKKILPDVVTFTILIEASLKEGNSSVAKALV 382
Query: 405 KFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRV 226
M + PD +++ LC+ K+ +A + + + D + YN LI GFC+
Sbjct: 383 DQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISYNALISGFCKA 442
Query: 225 GRIDKALTLKSFMKDNGCEPDLITYNVLL 139
R+ +AL+L M+ G PD IT+ +++
Sbjct: 443 SRVTEALSLYEDMQTRGLNPDEITFKLII 471
Score = 57.4 bits (137), Expect = 3e-06
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Frame = -3
Query: 468 YTIVISALCKVKRHDEAVDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDM 289
Y IS+ K +EA+ ++ M + D + + ++ L DLA E +M
Sbjct: 12 YRTRISSYVKTGLVNEALQVFDEMTQSDCRVFSIDYNRIIGVLIRTSHFDLA-EGYYNEM 70
Query: 288 RGKIGF--DAVIYNVLICGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXX 115
+ +GF +++ Y+ ICG C+V D L + M G P+ YN+ LN C+
Sbjct: 71 K-PVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENL 129
Query: 114 XXXXXXXXXKMQRSGMEPDSYSYNELLKGFCIVNRID 4
M G EPD SY ++ G C + R D
Sbjct: 130 VDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFD 166
>ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 511
Score = 276 bits (707), Expect = 2e-72
Identities = 129/199 (64%), Positives = 157/199 (78%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GIVP+ WA+N+YLNLLC ENLVD AL L+R+MGE+GREPDVVSYTIVIS LC++ R D A
Sbjct: 109 GIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNA 168
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
V+MW MI+K ++PDNKAC+ALV GLC +VDLAYELTLG +RG++ F+ IYN LI G
Sbjct: 169 VEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLAYELTLGILRGQVKFNTEIYNTLING 228
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FCR GRIDKA +K+FM+ NGCEPDL+TYNV LNYCCN KM+ +G+EPD
Sbjct: 229 FCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCNELMLEEAVKLIEKMEGNGLEPD 288
Query: 57 SYSYNELLKGFCIVNRIDK 1
YSYN+LL+GFC NR+DK
Sbjct: 289 GYSYNQLLRGFCKANRLDK 307
Score = 92.0 bits (227), Expect = 1e-16
Identities = 55/197 (27%), Positives = 88/197 (44%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G PD+ +N++LN C E ++++A+ L+ M G EPD SY ++ CK R D+A
Sbjct: 249 GCEPDLVTYNVFLNYCCNELMLEEAVKLIEKMEGNGLEPDGYSYNQLLRGFCKANRLDKA 308
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+ ++ D + ++ LC+ + AY L + KI D V + +LI
Sbjct: 309 YKLMVDKMETKGLVDVVSYNTIIRALCKTDHSKKAYNLFEEMEQKKIVPDVVTFTILIEA 368
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
+ G A L M G PD + Y +++ C M G+ PD
Sbjct: 369 SLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPD 428
Query: 57 SYSYNELLKGFCIVNRI 7
SYN L+ GFC +R+
Sbjct: 429 VISYNALISGFCKASRV 445
Score = 86.7 bits (213), Expect = 5e-15
Identities = 48/189 (25%), Positives = 83/189 (43%)
Frame = -3
Query: 573 FNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMWKFMI 394
+N +N C +D A + M G EPD+V+Y + ++ C +EAV + + M
Sbjct: 222 YNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCNELMLEEAVKLIEKME 281
Query: 393 KKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRVGRID 214
++PD + L+ G C+ ++D AY+L + M K D V YN +I C+
Sbjct: 282 GNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALCKTDHSK 341
Query: 213 KALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSYNELL 34
KA L M+ PD++T+ +L+ +M G+ PD Y ++
Sbjct: 342 KAYNLFEEMEQKKIVPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSII 401
Query: 33 KGFCIVNRI 7
C ++
Sbjct: 402 DNLCKTGKL 410
Score = 57.4 bits (137), Expect = 3e-06
Identities = 41/153 (26%), Positives = 66/153 (43%)
Frame = -3
Query: 594 IVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAV 415
IVPD+ F I + E A L+ M G PD V YT +I LCK + A
Sbjct: 355 IVPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAE 414
Query: 414 DMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGF 235
+++ M+++ V PD + AL+ G C+ +V A L + D + + ++I G
Sbjct: 415 SIFRDMVEQGVAPDVISYNALISGFCKASRVTEALSLYEDMQARDLNPDEITFKLIIGGL 474
Query: 234 CRVGRIDKALTLKSFMKDNGCEPDLITYNVLLN 136
+ + A + M + G D L+N
Sbjct: 475 IQEKNLSVACAIWDQMMEKGFTLDRDLSQTLIN 507
Score = 56.2 bits (134), Expect = 7e-06
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 2/157 (1%)
Frame = -3
Query: 468 YTIVISALCKVKRHDEAVDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDM 289
Y IS K +EA+ ++ M + D + + ++ L DLA E +M
Sbjct: 12 YRTRISNYVKTGLVNEALQVFDKMTQSDCRVFSIDYNRIIGVLIRTSHFDLA-EGYYNEM 70
Query: 288 RGKIGF--DAVIYNVLICGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXX 115
+ +GF +++ Y+ ICG C+V D L + M G P+ YN+ LN C+
Sbjct: 71 K-PVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENL 129
Query: 114 XXXXXXXXXKMQRSGMEPDSYSYNELLKGFCIVNRID 4
M G EPD SY ++ G C + R D
Sbjct: 130 VDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFD 166
Score = 55.8 bits (133), Expect = 9e-06
Identities = 33/109 (30%), Positives = 57/109 (52%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G+ PD + ++ LC + A + R M E+G PDV+SY +IS CK R EA
Sbjct: 389 GLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISYNALISGFCKASRVTEA 448
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGF 271
+ +++ M +D+ PD + ++ GL I++ +L+ + D + GF
Sbjct: 449 LSLYEDMQARDLNPDEITFKLIIGGL--IQEKNLSVACAIWDQMMEKGF 495
>gb|EPS65318.1| hypothetical protein M569_09460 [Genlisea aurea]
Length = 519
Score = 268 bits (685), Expect = 9e-70
Identities = 126/200 (63%), Positives = 159/200 (79%), Gaps = 1/200 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGE-NLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDE 421
GIVPD+WAFNIY+NLLC E + VD+AL +LRLM E+GR+PDVV+YT +IS LC+ KR+DE
Sbjct: 111 GIVPDLWAFNIYINLLCSEEDFVDEALRVLRLMAEKGRDPDVVTYTTIISGLCRAKRYDE 170
Query: 420 AVDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLIC 241
AV +W+ MI+ + PD+KACRALVLGLC++ KVDLAYELTLGDMRGK+ FDA +YNVL+
Sbjct: 171 AVRLWRTMIETGIVPDSKACRALVLGLCQVGKVDLAYELTLGDMRGKVDFDASVYNVLVD 230
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
GFCR GRIDKAL +K FMK NG +PDLIT+NVLL +CC+ KM++ GM+P
Sbjct: 231 GFCRSGRIDKALAIKDFMKRNGRQPDLITHNVLLRHCCDSRMVDEARKLMAKMEKGGMKP 290
Query: 60 DSYSYNELLKGFCIVNRIDK 1
D++SYN LLKG C R+D+
Sbjct: 291 DAFSYNALLKGLCRSRRVDR 310
Score = 95.5 bits (236), Expect = 1e-17
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Frame = -3
Query: 585 DIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMW 406
D +N+ ++ C +D AL + M GR+PD++++ +++ C + DEA +
Sbjct: 221 DASVYNVLVDGFCRSGRIDKALAIKDFMKRNGRQPDLITHNVLLRHCCDSRMVDEARKLM 280
Query: 405 KFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRV 226
M K +KPD + AL+ GLC +VD AY+L + +M K + V YN +I FC+
Sbjct: 281 AKMEKGGMKPDAFSYNALLKGLCRSRRVDRAYKLLITEMDAKGVANVVSYNTVIDSFCKA 340
Query: 225 GRIDKALTLKSFMKDNGCEPDLITYNVLL------------------------------- 139
G ++A L +M G PD +T+ VL+
Sbjct: 341 GDNERAYRLFGYMATKGIAPDAVTFAVLITGFLKAGDSAAAESLLDEMGGMNLSPGLELH 400
Query: 138 ----NYCCNXXXXXXXXXXXXKM---QRSGMEPDSYSYNELLKGFCIVNRI 7
+ C M +R G+ PD+ +YN L+ G+C R+
Sbjct: 401 TAIVDSLCKSGRMGAAREAFDGMARRRRGGIRPDAVAYNALVNGYCRAGRV 451
Score = 68.9 bits (167), Expect = 1e-09
Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 38/191 (19%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G+ PD +++N L LC VD A LL + +VVSY VI + CK ++ A
Sbjct: 287 GMKPDAFSYNALLKGLCRSRRVDRAYKLLITEMDAKGVANVVSYNTVIDSFCKAGDNERA 346
Query: 417 VDMWKFMIKKDVKPDNKACRALVLG----------------------------------- 343
++ +M K + PD L+ G
Sbjct: 347 YRLFGYMATKGIAPDAVTFAVLITGFLKAGDSAAAESLLDEMGGMNLSPGLELHTAIVDS 406
Query: 342 LCEIEKVDLAYELTLG---DMRGKIGFDAVIYNVLICGFCRVGRIDKALTLKSFMKDNGC 172
LC+ ++ A E G RG I DAV YN L+ G+CR GR+ +A + M+ G
Sbjct: 407 LCKSGRMGAAREAFDGMARRRRGGIRPDAVAYNALVNGYCRAGRVGEAERVVEEMESRGV 466
Query: 171 EPDLITYNVLL 139
PD TY ++
Sbjct: 467 RPDGATYRTIV 477
Score = 58.2 bits (139), Expect = 2e-06
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 9/187 (4%)
Frame = -3
Query: 537 LVDDALILLRLMGERGREPDV----VSYTIVISALCKVKRHDEAVDMWKFMIKKDVKPDN 370
L+D+A+ ++ + R D Y + L K +R DE+ + M+++ + +
Sbjct: 25 LIDEAV---QVFDDMDRRSDFRIFSADYNRFLGVLIKFRRFDESEYYYNHMMRRGLSLHS 81
Query: 369 KACRALVLGLCEIEKVDLAYEL-----TLGDMRGKIGFDAVIYNVLICGFCRVGRIDKAL 205
+ GLC + +L + L LG + F+ IY L+C +D+AL
Sbjct: 82 FTYSRFISGLCGVRNFELIFALFDDMDVLGIVPDLWAFN--IYINLLCS--EEDFVDEAL 137
Query: 204 TLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSYNELLKGF 25
+ M + G +PD++TY +++ C M +G+ PDS + L+ G
Sbjct: 138 RVLRLMAEKGRDPDVVTYTTIISGLCRAKRYDEAVRLWRTMIETGIVPDSKACRALVLGL 197
Query: 24 CIVNRID 4
C V ++D
Sbjct: 198 CQVGKVD 204
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 258 bits (659), Expect = 9e-67
Identities = 125/199 (62%), Positives = 151/199 (75%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G VPDIWA+NIYLNLLC EN +D AL +++ M E+GREPD+V+YTIVI+ LC+ R D A
Sbjct: 109 GYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSA 168
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
V++W+ M++K PD KACRALVLGLC KVDLAYELT+G MRG+I F IYN LI G
Sbjct: 169 VEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLING 228
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FC+ G IDKA ++ SFM+ NGCEPDL+TYNVLLNYCC+ KM+RSG+EPD
Sbjct: 229 FCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPD 288
Query: 57 SYSYNELLKGFCIVNRIDK 1
YSYNELLKG C NR+DK
Sbjct: 289 VYSYNELLKGLCKANRLDK 307
Score = 98.6 bits (244), Expect = 1e-18
Identities = 63/200 (31%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G PD+ +N+ LN C E L+++A L++ M G EPDV SY ++ LCK R D+A
Sbjct: 249 GCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKA 308
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGK-IGFDAVIYNVLIC 241
M ++ D + ++ LC AY+L +M GK I D V + +LI
Sbjct: 309 YMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKL-FEEMGGKGITPDVVTFTILIK 367
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
F R G + A L M G PD + Y ++++ C M SG+ P
Sbjct: 368 AFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITP 427
Query: 60 DSYSYNELLKGFCIVNRIDK 1
D SYN L+ G C +R+ +
Sbjct: 428 DVVSYNALINGLCRASRVSE 447
Score = 78.6 bits (192), Expect = 1e-12
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 2/192 (1%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G+ PD++++N L LC N +D A +++ E DVVSY +I ALC A
Sbjct: 284 GVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRA 343
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGF--DAVIYNVLI 244
+++ M K + PD L+ ++A +L L M G +G D V+Y ++
Sbjct: 344 YKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKL-LDQMTG-LGLLPDRVLYTTIV 401
Query: 243 CGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGME 64
C+ G++ A ++ M ++G PD+++YN L+N C M G
Sbjct: 402 DHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPC 461
Query: 63 PDSYSYNELLKG 28
PD ++ ++ G
Sbjct: 462 PDEVTFKLIIGG 473
>ref|XP_007227261.1| hypothetical protein PRUPE_ppa017811mg [Prunus persica]
gi|462424197|gb|EMJ28460.1| hypothetical protein
PRUPE_ppa017811mg [Prunus persica]
Length = 541
Score = 254 bits (649), Expect = 1e-65
Identities = 123/199 (61%), Positives = 146/199 (73%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G VPDIWAFNIYLNLLC EN AL + M ++GREPDVVSYTI+I LCK ++ D+A
Sbjct: 109 GAVPDIWAFNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYTILIDGLCKARQFDKA 168
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
VD+W MI+K KPDN AC ALV+GLC+ KVDLAY L +G+M+G++ F ++YN LI G
Sbjct: 169 VDIWTSMIRKGFKPDNIACTALVVGLCDGGKVDLAYNLVIGEMKGQVKFSNLMYNTLING 228
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FCR GRIDKA +KSFMK NGCE DL+T+NVLL YCCN KM+RSGMEPD
Sbjct: 229 FCRAGRIDKAQAIKSFMKRNGCESDLVTHNVLLKYCCNEFMLEEAEKLMKKMERSGMEPD 288
Query: 57 SYSYNELLKGFCIVNRIDK 1
YSYN+LLKG C NR DK
Sbjct: 289 VYSYNQLLKGLCQANRADK 307
Score = 85.1 bits (209), Expect = 1e-14
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G D+ N+ L C E ++++A L++ M G EPDV SY ++ LC+ R D+A
Sbjct: 249 GCESDLVTHNVLLKYCCNEFMLEEAEKLMKKMERSGMEPDVYSYNQLLKGLCQANRADKA 308
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGF--DAVIYNVLI 244
+ + ++ + + ++ C + AY+L + G+ G D V + +LI
Sbjct: 309 YLLMRTRMEPKGLCNVVSYNTIITAFCRAHRTGRAYKLF--EEMGQKGTMPDVVTFTILI 366
Query: 243 CGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGME 64
F R G D A L M G PD I Y ++++ C M G+
Sbjct: 367 EAFLREGSSDIANKLLDQMTVMGLLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGIA 426
Query: 63 PDSYSYNELLKGFCIVNRIDK 1
PD+ S+N L+ G C +R+ +
Sbjct: 427 PDAVSFNALINGLCKASRVSE 447
Score = 84.7 bits (208), Expect = 2e-14
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 2/199 (1%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G+ PD++++N L LC N D A +L+R E +VVSY +I+A C+ R A
Sbjct: 284 GMEPDVYSYNQLLKGLCQANRADKAYLLMRTRMEPKGLCNVVSYNTIITAFCRAHRTGRA 343
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGF--DAVIYNVLI 244
+++ M +K PD L+ D+A +L D +G D + Y ++
Sbjct: 344 YKLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIANKLL--DQMTVMGLLPDRIFYTTIV 401
Query: 243 CGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGME 64
C+ G+I A ++ S M + G PD +++N L+N C +MQ G
Sbjct: 402 DHLCKSGKIAMAYSVFSDMLEKGIAPDAVSFNALINGLCKASRVSEAMHLYEEMQNRGCC 461
Query: 63 PDSYSYNELLKGFCIVNRI 7
PD ++ ++ G N++
Sbjct: 462 PDEVTFKLIIGGLIRENKL 480
Score = 58.9 bits (141), Expect = 1e-06
Identities = 40/141 (28%), Positives = 63/141 (44%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G +PD+ F I + E D A LL M G PD + YT ++ LCK + A
Sbjct: 354 GTMPDVVTFTILIEAFLREGSSDIANKLLDQMTVMGLLPDRIFYTTIVDHLCKSGKIAMA 413
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
++ M++K + PD + AL+ GLC+ +V A L D V + ++I G
Sbjct: 414 YSVFSDMLEKGIAPDAVSFNALINGLCKASRVSEAMHLYEEMQNRGCCPDEVTFKLIIGG 473
Query: 237 FCRVGRIDKALTLKSFMKDNG 175
R ++ A + M + G
Sbjct: 474 LIRENKLSVACRVWDQMMEKG 494
Score = 57.0 bits (136), Expect = 4e-06
Identities = 43/178 (24%), Positives = 71/178 (39%)
Frame = -3
Query: 537 LVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMWKFMIKKDVKPDNKACR 358
L+D AL + M + Y I L + R+D A + M+ +
Sbjct: 24 LIDQALQVFDEMTRSDCRVFSIDYNRFIGVLVRHSRYDLAEHYYYEMVPQGFSLSAFTYS 83
Query: 357 ALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRVGRIDKALTLKSFMKDN 178
+ GLC+I L +L R D +N+ + C+ R AL + M D
Sbjct: 84 RFISGLCKIRNFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRMVDK 143
Query: 177 GCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSYNELLKGFCIVNRID 4
G EPD+++Y +L++ C M R G +PD+ + L+ G C ++D
Sbjct: 144 GREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKVD 201
>ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cicer arietinum]
Length = 516
Score = 251 bits (642), Expect = 8e-65
Identities = 117/199 (58%), Positives = 145/199 (72%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G VPDIWAFNIYLNLLC EN ++ AL L R M +GREPDVVSY I+++ALCK KR DE
Sbjct: 110 GFVPDIWAFNIYLNLLCRENQLETALQLFRTMPLKGREPDVVSYNIIVNALCKAKRVDEV 169
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+W+ +I+K +KPD K C ALV+GLC VDLAYEL +G + G + + ++YN LI G
Sbjct: 170 ARVWRSLIEKGLKPDFKVCAALVVGLCSAGNVDLAYELIVGVINGGVKVNCLVYNALISG 229
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FCR+GRIDKAL +K FM NGC PDL+TYN+LLNYCC+ M+RSG+EPD
Sbjct: 230 FCRMGRIDKALAIKGFMSRNGCVPDLVTYNILLNYCCDEVMLDEVVKLVESMERSGVEPD 289
Query: 57 SYSYNELLKGFCIVNRIDK 1
YSYNELLKGFC N++D+
Sbjct: 290 LYSYNELLKGFCKANQVDR 308
Score = 100 bits (250), Expect = 2e-19
Identities = 63/198 (31%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G VPD+ +NI LN C E ++D+ + L+ M G EPD+ SY ++ CK + D A
Sbjct: 250 GCVPDLVTYNILLNYCCDEVMLDEVVKLVESMERSGVEPDLYSYNELLKGFCKANQVDRA 309
Query: 417 -VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLIC 241
+ M K M K + D + ++ C+ +++ YEL R I D + + VLI
Sbjct: 310 YLTMVKRMQTKGMC-DVVSYNTIIAAFCKARRIERGYELFEEMRRKGIQPDVITFTVLIE 368
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
F + G D A L M G PDLI Y +++ C M +G+ P
Sbjct: 369 AFFKEGGSDVAKKLLDQMTTMGIVPDLIFYTTIVDRLCKAWKVDIAHGVFCDMVENGVSP 428
Query: 60 DSYSYNELLKGFCIVNRI 7
D SYN L+ GFC +R+
Sbjct: 429 DVVSYNALINGFCKASRV 446
Score = 89.4 bits (220), Expect = 7e-16
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 3/202 (1%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDA-LILLRLMGERGREPDVVSYTIVISALCKVKRHDE 421
G+ PD++++N L C N VD A L +++ M +G DVVSY +I+A CK +R +
Sbjct: 285 GVEPDLYSYNELLKGFCKANQVDRAYLTMVKRMQTKGM-CDVVSYNTIIAAFCKARRIER 343
Query: 420 AVDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGF--DAVIYNVL 247
++++ M +K ++PD L+ + D+A +L D +G D + Y +
Sbjct: 344 GYELFEEMRRKGIQPDVITFTVLIEAFFKEGGSDVAKKLL--DQMTTMGIVPDLIFYTTI 401
Query: 246 ICGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGM 67
+ C+ ++D A + M +NG PD+++YN L+N C +MQ G+
Sbjct: 402 VDRLCKAWKVDIAHGVFCDMVENGVSPDVVSYNALINGFCKASRVMDAMCLYDEMQDKGL 461
Query: 66 EPDSYSYNELLKGFCIVNRIDK 1
PD ++ ++ G N+I +
Sbjct: 462 YPDGVTFKLIVGGLIRENKISE 483
>gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis]
Length = 513
Score = 246 bits (629), Expect = 3e-63
Identities = 121/199 (60%), Positives = 145/199 (72%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G +PDIWAFNIYLN+LCGE+ V AL + R M ERGREPDVV+YTI+I LCK + D A
Sbjct: 109 GCIPDIWAFNIYLNVLCGEHRVQLALEVFRRMVERGREPDVVTYTILIDGLCKAWKFDAA 168
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
V+ W MIKK PD AC ALV+GLCE KVDLAYELT+G ++G++ F+ +IYN LI G
Sbjct: 169 VEAWCGMIKKGFVPDTIACTALVVGLCEGGKVDLAYELTVGALKGRVKFNNLIYNSLISG 228
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FCR GRIDKA +K FMK +GCEPDL+TYNVLL YCC+ M+R GM+PD
Sbjct: 229 FCRAGRIDKAQVIKDFMKRDGCEPDLVTYNVLLIYCCDKLMLDEANKLINTMERIGMKPD 288
Query: 57 SYSYNELLKGFCIVNRIDK 1
SYSYN+LLKG C +R DK
Sbjct: 289 SYSYNKLLKGLCRAHRPDK 307
Score = 90.1 bits (222), Expect = 4e-16
Identities = 52/189 (27%), Positives = 89/189 (47%)
Frame = -3
Query: 573 FNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMWKFMI 394
+N ++ C +D A ++ M G EPD+V+Y +++ C DEA + M
Sbjct: 222 YNSLISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYNVLLIYCCDKLMLDEANKLINTME 281
Query: 393 KKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRVGRID 214
+ +KPD+ + L+ GLC + D AY L + M K + V YN +I FC++ R+
Sbjct: 282 RIGMKPDSYSYNKLLKGLCRAHRPDKAYLLMVDSMESKGLANVVSYNTIIGAFCKLLRVR 341
Query: 213 KALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSYNELL 34
+A L M+ G EPD++T+ +L+ + +M G+ PD Y ++
Sbjct: 342 RAYQLFEEMRQKGIEPDVVTFTILIKAFLSVGSSDVAKRLLDQMTGMGLLPDCLFYTIIV 401
Query: 33 KGFCIVNRI 7
C +I
Sbjct: 402 DHLCKAGKI 410
Score = 86.3 bits (212), Expect = 6e-15
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 2/199 (1%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G+ PD +++N L LC + D A +L+ E +VVSY +I A CK+ R A
Sbjct: 284 GMKPDSYSYNKLLKGLCRAHRPDKAYLLMVDSMESKGLANVVSYNTIIGAFCKLLRVRRA 343
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGF--DAVIYNVLI 244
+++ M +K ++PD L+ + D+A L L M G +G D + Y +++
Sbjct: 344 YQLFEEMRQKGIEPDVVTFTILIKAFLSVGSSDVAKRL-LDQMTG-MGLLPDCLFYTIIV 401
Query: 243 CGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGME 64
C+ G+I A ++ S M + G PD+I+YN ++N C +MQ G+
Sbjct: 402 DHLCKAGKIGMAHSVFSDMVERGITPDVISYNAIINGLCKAFRVSEAVHLYEEMQARGLC 461
Query: 63 PDSYSYNELLKGFCIVNRI 7
PD ++ ++ G N++
Sbjct: 462 PDEVTFKLIIGGLIKENKL 480
Score = 57.8 bits (138), Expect = 2e-06
Identities = 32/95 (33%), Positives = 52/95 (54%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G++PD + I ++ LC + A + M ERG PDV+SY +I+ LCK R EA
Sbjct: 389 GLLPDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGITPDVISYNAIINGLCKAFRVSEA 448
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLA 313
V +++ M + + PD + ++ GL + K+ LA
Sbjct: 449 VHLYEEMQARGLCPDEVTFKLIIGGLIKENKLPLA 483
Score = 56.6 bits (135), Expect = 5e-06
Identities = 40/154 (25%), Positives = 68/154 (44%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GI PD+ F I + D A LL M G PD + YTI++ LCK + A
Sbjct: 354 GIEPDVVTFTILIKAFLSVGSSDVAKRLLDQMTGMGLLPDCLFYTIIVDHLCKAGKIGMA 413
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
++ M+++ + PD + A++ GLC+ +V A L + D V + ++I G
Sbjct: 414 HSVFSDMVERGITPDVISYNAIINGLCKAFRVSEAVHLYEEMQARGLCPDEVTFKLIIGG 473
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLN 136
+ ++ A + M + G + L+N
Sbjct: 474 LIKENKLPLACRVWDQMMEKGFTLEPALSETLIN 507
>ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568860947|ref|XP_006483973.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 517
Score = 245 bits (625), Expect = 8e-63
Identities = 117/199 (58%), Positives = 144/199 (72%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G +PDIWAFNIYLNLL EN +D AL + M +GREPD V+YTIVI LCK K+ D+A
Sbjct: 109 GYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKA 168
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
V W+ MI+ +KPDNKAC ALV+GLC KVDLAYELT+G M+GK+ F +IYN LI G
Sbjct: 169 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISG 228
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FCR GRI +A+ +KSFMK NGCEPDL+TYN +LNY C+ +M+ G+EPD
Sbjct: 229 FCRTGRICRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD 288
Query: 57 SYSYNELLKGFCIVNRIDK 1
YSYN+LLKG C N++DK
Sbjct: 289 VYSYNQLLKGLCNSNQLDK 307
Score = 89.4 bits (220), Expect = 7e-16
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 3/202 (1%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G PD+ +N LN C E ++D+A L+ M G EPDV SY ++ LC + D+A
Sbjct: 249 GCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKA 308
Query: 417 VDMWKFMIKK-DVKP--DNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVL 247
+ FM+KK + K D + ++ C+ + AY+L R I D V + +L
Sbjct: 309 ---YMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTIL 365
Query: 246 ICGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGM 67
I F R G A L + M+ PD I Y +++ C M G+
Sbjct: 366 IKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGI 425
Query: 66 EPDSYSYNELLKGFCIVNRIDK 1
PD SYN L+ G C +R+ +
Sbjct: 426 TPDVISYNALINGLCKSSRVSE 447
Score = 77.0 bits (188), Expect = 4e-12
Identities = 47/184 (25%), Positives = 81/184 (44%)
Frame = -3
Query: 573 FNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMWKFMI 394
+N ++ C + A+ + M G EPD+V+Y +++ C DEA + M
Sbjct: 222 YNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEME 281
Query: 393 KKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRVGRID 214
++PD + L+ GLC ++D AY + M K D V YN +I FC+ G+
Sbjct: 282 SCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTR 341
Query: 213 KALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSYNELL 34
+A L M+ G E D++T+ +L+ +M+ + PD Y ++
Sbjct: 342 RAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTII 401
Query: 33 KGFC 22
C
Sbjct: 402 DCLC 405
Score = 76.6 bits (187), Expect = 5e-12
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDA-LILLRLMGERGREPDVVSYTIVISALCKVKRHDE 421
GI PD++++N L LC N +D A + +++ M +G D VSY VI A CK +
Sbjct: 284 GIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRR 342
Query: 420 AVDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRG-KIGFDAVIYNVLI 244
A +++ M ++ ++ D L+ +A +L L MRG + D ++Y +I
Sbjct: 343 AYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKL-LNQMRGMNLSPDRILYTTII 401
Query: 243 CGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGME 64
C+ I A + M + G PD+I+YN L+N C +MQ G
Sbjct: 402 DCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAH 461
Query: 63 PDSYSYNELLKG 28
PD ++ L+ G
Sbjct: 462 PDEVTFKLLIGG 473
Score = 62.0 bits (149), Expect = 1e-07
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 1/192 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GI PD A + LCG+ VD A L + E V+ Y +IS C+ R A
Sbjct: 179 GIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRICRA 238
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+ + FM + +PD A++ C+ +D A +L + I D YN L+ G
Sbjct: 239 MAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKG 298
Query: 237 FCRVGRIDKA-LTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
C ++DKA + + M+ G D ++YN ++ C +M+R G+E
Sbjct: 299 LCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIEL 357
Query: 60 DSYSYNELLKGF 25
D ++ L+K F
Sbjct: 358 DVVTFTILIKAF 369
>ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citrus clementina]
gi|557540418|gb|ESR51462.1| hypothetical protein
CICLE_v10031251mg [Citrus clementina]
Length = 517
Score = 243 bits (620), Expect = 3e-62
Identities = 116/199 (58%), Positives = 143/199 (71%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G +PDIWAFNIYLNLL EN +D AL + M +GREPD V+YTIVI LCK K+ D+A
Sbjct: 109 GYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKA 168
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
V W+ MI+ +KPDNKAC ALV+GLC KVDLAYE T+G M+GK+ F +IYN LI G
Sbjct: 169 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYERTVGAMKGKVEFGVLIYNALISG 228
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FCR GRI +A+ +KSFMK NGCEPDL+TYN +LNY C+ +M+ G+EPD
Sbjct: 229 FCRTGRIRRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPD 288
Query: 57 SYSYNELLKGFCIVNRIDK 1
YSYN+LLKG C N++DK
Sbjct: 289 VYSYNQLLKGLCNSNQLDK 307
Score = 89.4 bits (220), Expect = 7e-16
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 3/202 (1%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G PD+ +N LN C E ++D+A L+ M G EPDV SY ++ LC + D+A
Sbjct: 249 GCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKA 308
Query: 417 VDMWKFMIKK-DVKP--DNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVL 247
+ FM+KK + K D + ++ C+ + AY+L R I D V + +L
Sbjct: 309 ---YMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTIL 365
Query: 246 ICGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGM 67
I F R G A L + M+ PD I Y +++ C M G+
Sbjct: 366 IKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGI 425
Query: 66 EPDSYSYNELLKGFCIVNRIDK 1
PD SYN L+ G C +R+ +
Sbjct: 426 TPDVISYNALINGLCKSSRVSE 447
Score = 77.4 bits (189), Expect = 3e-12
Identities = 47/184 (25%), Positives = 81/184 (44%)
Frame = -3
Query: 573 FNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMWKFMI 394
+N ++ C + A+ + M G EPD+V+Y +++ C DEA + M
Sbjct: 222 YNALISGFCRTGRIRRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEME 281
Query: 393 KKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRVGRID 214
++PD + L+ GLC ++D AY + M K D V YN +I FC+ G+
Sbjct: 282 SCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTR 341
Query: 213 KALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSYNELL 34
+A L M+ G E D++T+ +L+ +M+ + PD Y ++
Sbjct: 342 RAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTII 401
Query: 33 KGFC 22
C
Sbjct: 402 DCLC 405
Score = 76.6 bits (187), Expect = 5e-12
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDA-LILLRLMGERGREPDVVSYTIVISALCKVKRHDE 421
GI PD++++N L LC N +D A + +++ M +G D VSY VI A CK +
Sbjct: 284 GIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRR 342
Query: 420 AVDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRG-KIGFDAVIYNVLI 244
A +++ M ++ ++ D L+ +A +L L MRG + D ++Y +I
Sbjct: 343 AYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKL-LNQMRGMNLSPDRILYTTII 401
Query: 243 CGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGME 64
C+ I A + M + G PD+I+YN L+N C +MQ G
Sbjct: 402 DCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAH 461
Query: 63 PDSYSYNELLKG 28
PD ++ L+ G
Sbjct: 462 PDEVTFKLLIGG 473
Score = 62.4 bits (150), Expect = 9e-08
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 3/194 (1%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGE-RGR-EPDVVSYTIVISALCKVKRHD 424
GI PD A + LCG+ VD L R +G +G+ E V+ Y +IS C+ R
Sbjct: 179 GIKPDNKACAALVVGLCGDGKVD--LAYERTVGAMKGKVEFGVLIYNALISGFCRTGRIR 236
Query: 423 EAVDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLI 244
A+ + FM + +PD A++ C+ +D A +L + I D YN L+
Sbjct: 237 RAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLL 296
Query: 243 CGFCRVGRIDKA-LTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGM 67
G C ++DKA + + M+ G D ++YN ++ C +M+R G+
Sbjct: 297 KGLCNSNQLDKAYMFMVKKMEAKGLR-DKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGI 355
Query: 66 EPDSYSYNELLKGF 25
E D ++ L+K F
Sbjct: 356 ELDVVTFTILIKAF 369
>ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Glycine max]
gi|571471241|ref|XP_006585252.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Glycine max]
Length = 521
Score = 243 bits (619), Expect = 4e-62
Identities = 112/199 (56%), Positives = 143/199 (71%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G VPDIWAFN YLNLLC +N ++ AL L M +GR+PDVVSYTI+I ALC KR DEA
Sbjct: 114 GFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEA 173
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+W+ +I K + PD KAC ALV+GLC +VDLAYEL +G ++G + ++++YN LI G
Sbjct: 174 AKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDG 233
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FCR+GR+DKA+ +K+FM GC PDL+TYN+LLNYCC M+RSG+EPD
Sbjct: 234 FCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPD 293
Query: 57 SYSYNELLKGFCIVNRIDK 1
YSYNELLKGFC N +D+
Sbjct: 294 LYSYNELLKGFCKANMVDR 312
Score = 97.8 bits (242), Expect = 2e-18
Identities = 63/198 (31%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G VPD+ +NI LN C E +VD+A+ L+ M G EPD+ SY ++ CK D A
Sbjct: 254 GCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRA 313
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGK-IGFDAVIYNVLIC 241
M ++ D + ++ C+ + YEL +M GK I D V +N+LI
Sbjct: 314 HLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYEL-FEEMCGKGIRPDMVTFNILID 372
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
F R G L M PD I Y ++++ C M +G+ P
Sbjct: 373 AFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNP 432
Query: 60 DSYSYNELLKGFCIVNRI 7
D SYN LL GFC +R+
Sbjct: 433 DVISYNALLNGFCKTSRV 450
Score = 92.8 bits (229), Expect = 6e-17
Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDA-LILLRLMGERGREPDVVSYTIVISALCKVKRHDE 421
G+ PD++++N L C N+VD A L+++ M +G DVVSY VI+A CK +R +
Sbjct: 289 GVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGM-CDVVSYNTVITAFCKARRTRK 347
Query: 420 AVDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLIC 241
++++ M K ++PD L+ + +L + ++ D + Y ++
Sbjct: 348 GYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVD 407
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
C+ G++D A ++ M +NG PD+I+YN LLN C +MQ G+ P
Sbjct: 408 HLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYP 467
Query: 60 DSYSYNELLKG 28
D +Y ++ G
Sbjct: 468 DEVTYKLIVGG 478
>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 242 bits (618), Expect = 5e-62
Identities = 115/199 (57%), Positives = 149/199 (74%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G +PDIWAFNIYLNLL ENL++ AL M +GREPDVV+YTI++ LCK K++D+A
Sbjct: 109 GYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKA 168
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
V+ W+ M+ K + PD KAC ALV+GLC+ KVDLAYELT+G+M+G++ F+ +I+N L+ G
Sbjct: 169 VEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSG 228
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FC+ GRI KAL +KSFM +GCEPDLITYN+LLN+ C+ KM+R GMEPD
Sbjct: 229 FCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPD 288
Query: 57 SYSYNELLKGFCIVNRIDK 1
YSYN+LLKG C NR+DK
Sbjct: 289 VYSYNQLLKGLCKANRLDK 307
Score = 80.9 bits (198), Expect = 3e-13
Identities = 55/190 (28%), Positives = 89/190 (46%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G+ PD++++N L LC N +D A L+ M E+G D VSY VI ALCK +A
Sbjct: 284 GMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGL-CDTVSYNTVIGALCKSFATRKA 342
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+++ M +KDV PD L+ +A L + + D + Y ++
Sbjct: 343 YRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDY 402
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FC+ +I+ A + M + G PD+++YN L+N C +MQ G PD
Sbjct: 403 FCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPD 462
Query: 57 SYSYNELLKG 28
++ ++ G
Sbjct: 463 EVTFKLIIGG 472
Score = 79.0 bits (193), Expect = 1e-12
Identities = 56/199 (28%), Positives = 85/199 (42%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G PD+ +NI LN C +++ A ++ M G EPDV SY ++ LCK R D+A
Sbjct: 249 GCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKA 308
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+ M +K + D + ++ LC+ AY L + + D + LI
Sbjct: 309 YKLMNTMWEKGL-CDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKA 367
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
F G A L M PDLI Y +++Y C M G+ PD
Sbjct: 368 FLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPD 427
Query: 57 SYSYNELLKGFCIVNRIDK 1
SYN L+ G C +++ +
Sbjct: 428 VVSYNALINGLCKASKVSE 446
>ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 516
Score = 234 bits (598), Expect = 1e-59
Identities = 115/199 (57%), Positives = 140/199 (70%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G VPDIWAFNIYLNLLC EN + AL + M ++GREPDVVSYTIVI LCK R D A
Sbjct: 110 GSVPDIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVIHGLCKAGRFDNA 169
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
V++W MI K +PD AC ALV+GLC KVDLAY+L +G+M+G + F+ +IYN LI G
Sbjct: 170 VEIWNGMISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKGGVEFNNLIYNALISG 229
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FCR RIDKA +K FMK NGC+PDL+T+NVLLNYCCN +M++ GM+ D
Sbjct: 230 FCRARRIDKAQAIKLFMKRNGCKPDLVTHNVLLNYCCNEFMLEEAEKLMRQMEKIGMKLD 289
Query: 57 SYSYNELLKGFCIVNRIDK 1
+YSYN LKG C NR +K
Sbjct: 290 AYSYNGFLKGLCKDNRPEK 308
Score = 79.0 bits (193), Expect = 1e-12
Identities = 53/197 (26%), Positives = 86/197 (43%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G PD+ N+ LN C E ++++A L+R M + G + D SY + LCK R ++A
Sbjct: 250 GCKPDLVTHNVLLNYCCNEFMLEEAEKLMRQMEKIGMKLDAYSYNGFLKGLCKDNRPEKA 309
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
K M++ + + +++ C+ + AY+L + I D V + +LI
Sbjct: 310 YLFMKNMMEPKGLCNVVSFNTIIMACCKGGQTRRAYKLFQEMFQKGILPDVVTFTILIGA 369
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
F R G D A L M PD I Y ++++ C M G+ D
Sbjct: 370 FLREGSSDVAKKLLDQMTGMDLLPDRIFYTTIIDHLCKSGKIAMACDMFNDMLEKGITAD 429
Query: 57 SYSYNELLKGFCIVNRI 7
YN L+ G C +R+
Sbjct: 430 VVLYNALISGLCRASRV 446
Score = 78.2 bits (191), Expect = 2e-12
Identities = 46/149 (30%), Positives = 75/149 (50%)
Frame = -3
Query: 585 DIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMW 406
++ +FN + C A L + M ++G PDVV++TI+I A + D A +
Sbjct: 324 NVVSFNTIIMACCKGGQTRRAYKLFQEMFQKGILPDVVTFTILIGAFLREGSSDVAKKLL 383
Query: 405 KFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRV 226
M D+ PD ++ LC+ K+ +A ++ + I D V+YN LI G CR
Sbjct: 384 DQMTGMDLLPDRIFYTTIIDHLCKSGKIAMACDMFNDMLEKGITADVVLYNALISGLCRA 443
Query: 225 GRIDKALTLKSFMKDNGCEPDLITYNVLL 139
R+ +A+ L M+ GC PD +TY V++
Sbjct: 444 SRVTEAMHLYEEMQTRGCFPDEVTYKVVI 472
Score = 70.5 bits (171), Expect = 3e-10
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 1/191 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G+ D +++N +L LC +N + A + ++ M E +VVS+ +I A CK + A
Sbjct: 285 GMKLDAYSYNGFLKGLCKDNRPEKAYLFMKNMMEPKGLCNVVSFNTIIMACCKGGQTRRA 344
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGK-IGFDAVIYNVLIC 241
+++ M +K + PD L+ D+A +L L M G + D + Y +I
Sbjct: 345 YKLFQEMFQKGILPDVVTFTILIGAFLREGSSDVAKKL-LDQMTGMDLLPDRIFYTTIID 403
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
C+ G+I A + + M + G D++ YN L++ C +MQ G P
Sbjct: 404 HLCKSGKIAMACDMFNDMLEKGITADVVLYNALISGLCRASRVTEAMHLYEEMQTRGCFP 463
Query: 60 DSYSYNELLKG 28
D +Y ++ G
Sbjct: 464 DEVTYKVVIGG 474
Score = 63.5 bits (153), Expect = 4e-08
Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GI+PD+ F I + E D A LL M PD + YT +I LCK + A
Sbjct: 355 GILPDVVTFTILIGAFLREGSSDVAKKLLDQMTGMDLLPDRIFYTTIIDHLCKSGKIAMA 414
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGF-DAVIYNVLIC 241
DM+ M++K + D AL+ GLC +V A L +M+ + F D V Y V+I
Sbjct: 415 CDMFNDMLEKGITADVVLYNALISGLCRASRVTEAMHL-YEEMQTRGCFPDEVTYKVVIG 473
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLN 136
G + R+ A + M + G D + L+N
Sbjct: 474 GLIKDKRLSVACGVWDEMMEKGFTLDRVLSETLIN 508
>ref|XP_007159689.1| hypothetical protein PHAVU_002G258900g [Phaseolus vulgaris]
gi|561033104|gb|ESW31683.1| hypothetical protein
PHAVU_002G258900g [Phaseolus vulgaris]
Length = 518
Score = 233 bits (595), Expect = 2e-59
Identities = 109/199 (54%), Positives = 140/199 (70%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G VPDIWAFN YL+ LC N ++ AL L M GREPDVVSYTI++ ALCK +R+DEA
Sbjct: 112 GFVPDIWAFNTYLSFLCRHNRLETALELFHSMPSEGREPDVVSYTIIVDALCKAQRYDEA 171
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+W+ + K + PD KAC ALV+GLC +VDLAYEL +G ++G + + ++YN LI G
Sbjct: 172 ARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVNILVYNALIDG 231
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FCR+GR+DKA+ +K+FM NGC PDL+TYN LLNYCC+ M+RSG+EPD
Sbjct: 232 FCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEALRLVETMERSGVEPD 291
Query: 57 SYSYNELLKGFCIVNRIDK 1
YSYNELLK FC N +D+
Sbjct: 292 FYSYNELLKCFCKANMVDR 310
Score = 101 bits (252), Expect = 1e-19
Identities = 64/198 (32%), Positives = 91/198 (45%), Gaps = 1/198 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G VPD+ +N LN C E ++D+AL L+ M G EPD SY ++ CK D A
Sbjct: 252 GCVPDLVTYNTLLNYCCDEGMLDEALRLVETMERSGVEPDFYSYNELLKCFCKANMVDRA 311
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGK-IGFDAVIYNVLIC 241
M ++ D + L+ C++ + YEL +M GK I D V +N+LI
Sbjct: 312 YLMLVERMQTKGMCDVVSYNTLITAFCKVRRTRRGYEL-FEEMCGKGIRPDMVTFNILID 370
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
F R G I L M G PD I Y ++++ C M +G+ P
Sbjct: 371 AFLREGSIQVVKKLLDEMTRLGILPDRIFYTAVVDHLCKTGKVDTADSVFRDMVENGVNP 430
Query: 60 DSYSYNELLKGFCIVNRI 7
D SYN L+ GFC +R+
Sbjct: 431 DVISYNALVNGFCKASRV 448
Score = 95.9 bits (237), Expect = 8e-18
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 1/191 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDA-LILLRLMGERGREPDVVSYTIVISALCKVKRHDE 421
G+ PD +++N L C N+VD A L+L+ M +G DVVSY +I+A CKV+R
Sbjct: 287 GVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTKGM-CDVVSYNTLITAFCKVRRTRR 345
Query: 420 AVDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLIC 241
++++ M K ++PD L+ + + +L R I D + Y ++
Sbjct: 346 GYELFEEMCGKGIRPDMVTFNILIDAFLREGSIQVVKKLLDEMTRLGILPDRIFYTAVVD 405
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
C+ G++D A ++ M +NG PD+I+YN L+N C +MQR+G+ P
Sbjct: 406 HLCKTGKVDTADSVFRDMVENGVNPDVISYNALVNGFCKASRVMDAMRLYDEMQRNGLYP 465
Query: 60 DSYSYNELLKG 28
D ++ ++ G
Sbjct: 466 DEVTFKLIVGG 476
Score = 92.0 bits (227), Expect = 1e-16
Identities = 55/198 (27%), Positives = 92/198 (46%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G+ +I +N ++ C VD A+ + M G PD+V+Y +++ C DEA
Sbjct: 217 GVKVNILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEA 276
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+ + + M + V+PD + L+ C+ VD AY + + M+ K D V YN LI
Sbjct: 277 LRLVETMERSGVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTKGMCDVVSYNTLITA 336
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
FC+V R + L M G PD++T+N+L++ +M R G+ PD
Sbjct: 337 FCKVRRTRRGYELFEEMCGKGIRPDMVTFNILIDAFLREGSIQVVKKLLDEMTRLGILPD 396
Query: 57 SYSYNELLKGFCIVNRID 4
Y ++ C ++D
Sbjct: 397 RIFYTAVVDHLCKTGKVD 414
Score = 66.6 bits (161), Expect = 5e-09
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G+ PD A + LCG VD A L+ + + G + +++ Y +I C++ R D+A
Sbjct: 182 GLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVNILVYNALIDGFCRMGRVDKA 241
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+ + FM + PD L+ C+ +D A L R + D YN L+
Sbjct: 242 MKIKAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEALRLVETMERSGVEPDFYSYNELLKC 301
Query: 237 FCRVGRIDKA-LTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
FC+ +D+A L L M+ G D+++YN L+ C +M G+ P
Sbjct: 302 FCKANMVDRAYLMLVERMQTKGM-CDVVSYNTLITAFCKVRRTRRGYELFEEMCGKGIRP 360
Query: 60 DSYSYNELLKGF 25
D ++N L+ F
Sbjct: 361 DMVTFNILIDAF 372
Score = 63.2 bits (152), Expect = 5e-08
Identities = 45/154 (29%), Positives = 70/154 (45%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GI PD+ FNI ++ E + LL M G PD + YT V+ LCK + D A
Sbjct: 357 GIRPDMVTFNILIDAFLREGSIQVVKKLLDEMTRLGILPDRIFYTAVVDHLCKTGKVDTA 416
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+++ M++ V PD + ALV G C+ +V A L R + D V + +++ G
Sbjct: 417 DSVFRDMVENGVNPDVISYNALVNGFCKASRVMDAMRLYDEMQRNGLYPDEVTFKLIVGG 476
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLN 136
R ++ A + M + G D L+N
Sbjct: 477 LIRGKKLSLACRVWDQMMEKGLTLDKHLSETLVN 510
>ref|XP_007044848.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|590695292|ref|XP_007044849.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|590695295|ref|XP_007044850.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|590695299|ref|XP_007044851.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508708783|gb|EOY00680.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508708784|gb|EOY00681.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508708785|gb|EOY00682.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao] gi|508708786|gb|EOY00683.1|
Pentatricopeptide repeat superfamily protein isoform 1
[Theobroma cacao]
Length = 516
Score = 231 bits (588), Expect = 2e-58
Identities = 112/198 (56%), Positives = 140/198 (70%), Gaps = 1/198 (0%)
Frame = -3
Query: 591 VPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVD 412
VPDIWAFNIYLNLLC E ++ AL + + ++GR+PDVV+YTI+I LCK + D AV
Sbjct: 111 VPDIWAFNIYLNLLCREKKIELALEVFHSLVKKGRDPDVVTYTIMIDGLCKAGKFDNAVG 170
Query: 411 MWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMR-GKIGFDAVIYNVLICGF 235
W+ M+ K +PDNKAC ALV+GLC+ KVDLAYEL + ++ G I F ++YN LI GF
Sbjct: 171 FWREMVGKGFRPDNKACCALVVGLCDGGKVDLAYELVVEVIKGGDIEFSTLLYNALISGF 230
Query: 234 CRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDS 55
CR+ RIDKA +K FM NGCEPDL+TYNVLLNYCCN KM+RSG+ PD
Sbjct: 231 CRIRRIDKAQAIKLFMTKNGCEPDLVTYNVLLNYCCNELMLEEAAKLVKKMERSGIGPDV 290
Query: 54 YSYNELLKGFCIVNRIDK 1
Y YN+++KGFC NR DK
Sbjct: 291 YGYNQMIKGFCNANRPDK 308
Score = 89.7 bits (221), Expect = 5e-16
Identities = 56/196 (28%), Positives = 86/196 (43%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G PD+ +N+ LN C E ++++A L++ M G PDV Y +I C R D+A
Sbjct: 250 GCEPDLVTYNVLLNYCCNELMLEEAAKLVKKMERSGIGPDVYGYNQMIKGFCNANRPDKA 309
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+ + ++ + D + ++ C+ + AY+L R I D V + LI
Sbjct: 310 LLLMVNKMEANGLADAVSHNTIIKAFCKGGHIGKAYKLFEEMGRKGIAPDVVTFTTLIKA 369
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
G D A L M G PD I Y ++++ C M + G+ PD
Sbjct: 370 CLTEGSSDIAKALLDRMSGMGLLPDCIFYTAIIDHLCKNGKVEMAHSVFDDMIKQGVNPD 429
Query: 57 SYSYNELLKGFCIVNR 10
SYN L+ GFC NR
Sbjct: 430 VVSYNALINGFCKSNR 445
Score = 80.9 bits (198), Expect = 3e-13
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 2/201 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GI PD++ +N + C N D AL+L+ E D VS+ +I A CK +A
Sbjct: 285 GIGPDVYGYNQMIKGFCNANRPDKALLLMVNKMEANGLADAVSHNTIIKAFCKGGHIGKA 344
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGF--DAVIYNVLI 244
+++ M +K + PD L+ D+A L D +G D + Y +I
Sbjct: 345 YKLFEEMGRKGIAPDVVTFTTLIKACLTEGSSDIAKALL--DRMSGMGLLPDCIFYTAII 402
Query: 243 CGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGME 64
C+ G+++ A ++ M G PD+++YN L+N C +MQ G
Sbjct: 403 DHLCKNGKVEMAHSVFDDMIKQGVNPDVVSYNALINGFCKSNRASEAIHLYEEMQTRGFS 462
Query: 63 PDSYSYNELLKGFCIVNRIDK 1
PD ++ ++ G ++ K
Sbjct: 463 PDEVTFKLIIGGLIREKKLSK 483
Score = 63.9 bits (154), Expect = 3e-08
Identities = 45/154 (29%), Positives = 66/154 (42%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GI PD+ F + E D A LL M G PD + YT +I LCK + + A
Sbjct: 355 GIAPDVVTFTTLIKACLTEGSSDIAKALLDRMSGMGLLPDCIFYTAIIDHLCKNGKVEMA 414
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
++ MIK+ V PD + AL+ G C+ + A L D V + ++I G
Sbjct: 415 HSVFDDMIKQGVNPDVVSYNALINGFCKSNRASEAIHLYEEMQTRGFSPDEVTFKLIIGG 474
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLN 136
R ++ KA + M + G D L+N
Sbjct: 475 LIREKKLSKACKVWDQMMEKGFTLDGAVSETLIN 508
>ref|XP_002312667.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222852487|gb|EEE90034.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 512
Score = 224 bits (572), Expect = 1e-56
Identities = 112/198 (56%), Positives = 136/198 (68%), Gaps = 1/198 (0%)
Frame = -3
Query: 591 VPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVD 412
VPDIWAFNIYLNLL EN + AL + M ERGREPDVV++TI+I LCK+K+ D AV
Sbjct: 111 VPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQ 170
Query: 411 MWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIG-FDAVIYNVLICGF 235
W M+ K ++PDNKAC AL +GLC+ +VDLAYEL +G + G + ++YN LI GF
Sbjct: 171 FWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGF 230
Query: 234 CRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDS 55
CR GRIDKAL + SFM GC+PDL+TYNVLLNYCCN KM+ S +EPD
Sbjct: 231 CRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDV 290
Query: 54 YSYNELLKGFCIVNRIDK 1
YSYN+LLK C N DK
Sbjct: 291 YSYNQLLKAHCKANHPDK 308
Score = 96.3 bits (238), Expect = 6e-18
Identities = 63/195 (32%), Positives = 88/195 (45%), Gaps = 3/195 (1%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G PD+ +N+ LN C E + ++A+ LL+ M EPDV SY ++ A CK D+A
Sbjct: 250 GCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKA 309
Query: 417 VDMWKFMIKKDVKP---DNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVL 247
+ FM+ K V D + ++ C I AY+L R I D V + +L
Sbjct: 310 ---YLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTIL 366
Query: 246 ICGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGM 67
I F R G D A L M G PD I Y ++++ C M G+
Sbjct: 367 IKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGI 426
Query: 66 EPDSYSYNELLKGFC 22
PD SYN L+ GFC
Sbjct: 427 TPDVVSYNALINGFC 441
Score = 77.0 bits (188), Expect = 4e-12
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 3/199 (1%)
Frame = -3
Query: 594 IVPDIWAFNIYLNLLCGENLVDDA-LILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
I PD++++N L C N D A L ++ M +G DVVSY +I A C + + A
Sbjct: 286 IEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGF-CDVVSYNTIIKAFCSISNNRRA 344
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGF--DAVIYNVLI 244
+++ M +K + PD L+ D+A +L D+ +G D + Y +I
Sbjct: 345 YKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLL--DLMAGMGLLPDRIFYTTII 402
Query: 243 CGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGME 64
C+ G+++ A ++ M + G PD+++YN L+N C +M + G
Sbjct: 403 DHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSF 462
Query: 63 PDSYSYNELLKGFCIVNRI 7
PD +Y ++ N++
Sbjct: 463 PDEVTYKLIIGALVRENKL 481
Score = 58.9 bits (141), Expect = 1e-06
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 3/157 (1%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GI PD+ F I + E D A LL LM G PD + YT +I CK + + A
Sbjct: 355 GIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMA 414
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCE---IEKVDLAYELTLGDMRGKIGFDAVIYNVL 247
++ M++K + PD + AL+ G C+ + +V YE L RG D V Y ++
Sbjct: 415 HSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQML--QRGSFP-DEVTYKLI 471
Query: 246 ICGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLN 136
I R ++ A + M + G D +L+N
Sbjct: 472 IGALVRENKLSDACRVWDQMMERGLTLDRGISEMLIN 508
>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 223 bits (569), Expect = 2e-56
Identities = 108/198 (54%), Positives = 138/198 (69%), Gaps = 1/198 (0%)
Frame = -3
Query: 591 VPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVD 412
+PDIWAFNIYL+LL E +D AL + + + GR+PDVV+YTI+I +CK+K+ D A+
Sbjct: 111 LPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQ 170
Query: 411 MWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMR-GKIGFDAVIYNVLICGF 235
W+ MI K PDNKAC A+V+GLC+ KVDLAYEL + M+ G++ ++YN LI GF
Sbjct: 171 FWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGF 230
Query: 234 CRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDS 55
CR GRIDKA +KSFM+ NGCEPDL+TYNV LNY C+ M+RSG+EPD
Sbjct: 231 CRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDV 290
Query: 54 YSYNELLKGFCIVNRIDK 1
YSYN+LLKG C N DK
Sbjct: 291 YSYNQLLKGICKGNCPDK 308
Score = 96.3 bits (238), Expect = 6e-18
Identities = 58/199 (29%), Positives = 91/199 (45%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G PD+ +N++LN C E ++DDA LL+LM G EPDV SY ++ +CK D+A
Sbjct: 250 GCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKA 309
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICG 238
+ + D + ++ C+I AY+L + I D V + + I
Sbjct: 310 YLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKA 369
Query: 237 FCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPD 58
F G + A L M + G PD I Y ++++ C M G+ PD
Sbjct: 370 FLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPD 429
Query: 57 SYSYNELLKGFCIVNRIDK 1
S+N L+ GFC +R+ +
Sbjct: 430 VISFNALINGFCKCSRVSE 448
Score = 75.1 bits (183), Expect = 1e-11
Identities = 49/191 (25%), Positives = 84/191 (43%)
Frame = -3
Query: 585 DIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMW 406
D+ ++N + C A L MG++G PDVV++TI I A + A +
Sbjct: 324 DVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLL 383
Query: 405 KFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRV 226
M + + PD ++ LC+ KV++A+ + + I D + +N LI GFC+
Sbjct: 384 DQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKC 443
Query: 225 GRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSY 46
R+ +A+ L M++ G PD +TY +++ +M G D
Sbjct: 444 SRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIA 503
Query: 45 NELLKGFCIVN 13
L++G I N
Sbjct: 504 QTLIRGNSIEN 514
Score = 65.5 bits (158), Expect = 1e-08
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GI PD+ F I++ G+ + A LL M E G PD + YT +I LCK + + A
Sbjct: 355 GIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMA 414
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGF-DAVIYNVLIC 241
++ M+++ + PD + AL+ G C+ +V A L +M+ + + D V Y ++I
Sbjct: 415 HSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHL-YEEMQNRGSYPDEVTYKLIIG 473
Query: 240 GFCRVGRIDKALTLKSFMKDNG 175
G +I A + M D G
Sbjct: 474 GLIEEKKISIACMVWGQMMDKG 495
>ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis
thaliana] gi|332190841|gb|AEE28962.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 209 bits (531), Expect = 6e-52
Identities = 104/200 (52%), Positives = 136/200 (68%), Gaps = 1/200 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G +PDIWAFN+YL+LLC EN V A+ M +RGREPDVVSYTI+I+ L + + +A
Sbjct: 109 GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMR-GKIGFDAVIYNVLIC 241
V++W MI+ V PDNKAC ALV+GLC KVDLAYE+ +++ ++ V+YN LI
Sbjct: 169 VEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALIS 228
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
GFC+ GRI+KA LKS+M GCEPDL+TYNVLLNY + +M RSG++
Sbjct: 229 GFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQL 288
Query: 60 DSYSYNELLKGFCIVNRIDK 1
D+YSYN+LLK C V+ DK
Sbjct: 289 DAYSYNQLLKRHCRVSHPDK 308
Score = 72.0 bits (175), Expect = 1e-10
Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 5/202 (2%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G PD+ +N+ LN N++ A ++ M G + D SY ++ C+V D+
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 417 VDMWKFMIKKDVKP----DNKACRALVLGLCEIEKVDLAYELTLGDMRGK-IGFDAVIYN 253
+ FM+K +++P D + L+ C AY L +MR K + + V Y
Sbjct: 310 ---YNFMVK-EMEPRGFCDVVSYSTLIETFCRASNTRKAYRL-FEEMRQKGMVMNVVTYT 364
Query: 252 VLICGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRS 73
LI F R G A L M + G PD I Y +L++ C M
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH 424
Query: 72 GMEPDSYSYNELLKGFCIVNRI 7
+ PD+ SYN L+ G C R+
Sbjct: 425 EITPDAISYNSLISGLCRSGRV 446
Score = 67.8 bits (164), Expect = 2e-09
Identities = 48/188 (25%), Positives = 80/188 (42%)
Frame = -3
Query: 585 DIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMW 406
D+ +++ + C + A L M ++G +VV+YT +I A + A +
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 405 KFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRV 226
M + + PD ++ LC+ VD AY + + +I DA+ YN LI G CR
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 225 GRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSY 46
GR+ +A+ L MK C PD +T+ ++ +M G D
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 45 NELLKGFC 22
+ L+K C
Sbjct: 504 DTLIKASC 511
Score = 67.0 bits (162), Expect = 4e-09
Identities = 44/191 (23%), Positives = 77/191 (40%)
Frame = -3
Query: 573 FNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMWKFMI 394
+N ++ C ++ A L M + G EPD+V+Y ++++ A + M+
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 393 KKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRVGRID 214
+ ++ D + L+ C + D Y + +M + D V Y+ LI FCR
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTR 342
Query: 213 KALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSYNELL 34
KA L M+ G +++TY L+ +M G+ PD Y +L
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 33 KGFCIVNRIDK 1
C +DK
Sbjct: 403 DHLCKSGNVDK 413
Score = 58.9 bits (141), Expect = 1e-06
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G+V ++ + + E A LL M E G PD + YT ++ LCK D+A
Sbjct: 355 GMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGK-IGFDAVIYNVLIC 241
++ MI+ ++ PD + +L+ GLC +V A +L DM+GK D + + +I
Sbjct: 415 YGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKL-FEDMKGKECCPDELTFKFIIG 473
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCN 124
G R ++ A + M D G D + L+ C+
Sbjct: 474 GLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCS 512
>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335822|gb|EFH66239.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 517
Score = 209 bits (531), Expect = 6e-52
Identities = 105/200 (52%), Positives = 136/200 (68%), Gaps = 1/200 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G +PDIWAFNIYL+LLC EN V A+ M +RGREPDVVSYTI+I+ L + + +A
Sbjct: 109 GFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMR-GKIGFDAVIYNVLIC 241
V++W MI+ V PDNKAC ALV+GLC KVDLAYE+ +++ ++ V+YN LI
Sbjct: 169 VEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALIS 228
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
GFC+ GRI+KA LKSFM GCEPDL+TYNVLLNY + +M RSG++
Sbjct: 229 GFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQL 288
Query: 60 DSYSYNELLKGFCIVNRIDK 1
D+YSYN+LLK C V+ D+
Sbjct: 289 DAYSYNQLLKRHCRVSHPDR 308
Score = 70.9 bits (172), Expect = 3e-10
Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 5/202 (2%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G PD+ +N+ LN N++ A ++ M G + D SY ++ C+V D
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRC 309
Query: 417 VDMWKFMIKKDVKP----DNKACRALVLGLCEIEKVDLAYELTLGDMRGK-IGFDAVIYN 253
+ FM+K +++P D + L+ C AY+L +MR K I + V +
Sbjct: 310 ---YSFMLK-EMEPRGFCDVVSYSTLIETFCRASNTKKAYKL-FEEMRQKGIVTNVVTFT 364
Query: 252 VLICGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRS 73
LI F R G A L M + G PD I Y +L++ C M
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEH 424
Query: 72 GMEPDSYSYNELLKGFCIVNRI 7
+ PD+ SYN L+ G C R+
Sbjct: 425 EITPDAISYNSLISGLCRSGRV 446
Score = 68.2 bits (165), Expect = 2e-09
Identities = 45/194 (23%), Positives = 78/194 (40%)
Frame = -3
Query: 582 IWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMWK 403
I +N ++ C ++ A L M + G EPD+V+Y ++++ A +
Sbjct: 220 IVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMT 279
Query: 402 FMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRVG 223
M++ ++ D + L+ C + D Y L +M + D V Y+ LI FCR
Sbjct: 280 EMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYSTLIETFCRAS 339
Query: 222 RIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSYN 43
KA L M+ G +++T+ L+ +M G+ PD Y
Sbjct: 340 NTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 42 ELLKGFCIVNRIDK 1
+L C +DK
Sbjct: 400 TILDHLCKSGNVDK 413
Score = 66.6 bits (161), Expect = 5e-09
Identities = 47/188 (25%), Positives = 80/188 (42%)
Frame = -3
Query: 585 DIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMW 406
D+ +++ + C + A L M ++G +VV++T +I A + A +
Sbjct: 324 DVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLL 383
Query: 405 KFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRV 226
M + + PD ++ LC+ VD AY + + +I DA+ YN LI G CR
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 225 GRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSY 46
GR+ +A+ L MK C PD +T+ ++ +M G D
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 45 NELLKGFC 22
+ L+K C
Sbjct: 504 DTLIKASC 511
Score = 62.0 bits (149), Expect = 1e-07
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GIV ++ F + E A LL M E G PD + YT ++ LCK D+A
Sbjct: 355 GIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGK-IGFDAVIYNVLIC 241
++ MI+ ++ PD + +L+ GLC +V A +L DM+GK D + + +I
Sbjct: 415 YGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKL-FEDMKGKECCPDELTFKFIIG 473
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCN 124
G R ++ A + M D G D + L+ C+
Sbjct: 474 GLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCS 512
>ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Capsella rubella]
gi|482573572|gb|EOA37759.1| hypothetical protein
CARUB_v10012598mg [Capsella rubella]
Length = 517
Score = 208 bits (530), Expect = 8e-52
Identities = 106/200 (53%), Positives = 135/200 (67%), Gaps = 1/200 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
G +PDIWAFNIYL+LLC EN V A+ M +RGREPDVVSYTI+I+ L + + +A
Sbjct: 109 GFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMR-GKIGFDAVIYNVLIC 241
V++W MI+ V+PDNKAC ALV+GLC KVDLAYE+ +++ ++ V+YN LI
Sbjct: 169 VEIWNEMIRSGVRPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALIS 228
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEP 61
GFC+ GRI+KA LKSFM CEPDL+TYNVLLNY +M RSG+E
Sbjct: 229 GFCKAGRIEKAEALKSFMNKIECEPDLVTYNVLLNYYYENNLLKKAEGVMTEMVRSGVEL 288
Query: 60 DSYSYNELLKGFCIVNRIDK 1
D+YSYN+LLK C V+ DK
Sbjct: 289 DAYSYNQLLKRHCRVSHPDK 308
Score = 74.3 bits (181), Expect = 2e-11
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 5/199 (2%)
Frame = -3
Query: 588 PDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDM 409
PD+ +N+ LN NL+ A ++ M G E D SY ++ C+V D+
Sbjct: 253 PDLVTYNVLLNYYYENNLLKKAEGVMTEMVRSGVELDAYSYNQLLKRHCRVSHPDKC--- 309
Query: 408 WKFMIKKDVKP----DNKACRALVLGLCEIEKVDLAYELTLGDMRGK-IGFDAVIYNVLI 244
+ FM+K +++P D + L+ C AY+L +MR K I + V Y LI
Sbjct: 310 YSFMVK-EMEPRGFCDVVSYSTLIETYCRASNTRKAYKL-FEEMRQKGIVTNVVTYTSLI 367
Query: 243 CGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGME 64
F R G+ A L M + G PD I Y +LN+ C M +
Sbjct: 368 KAFLREGKSSVAKKLLDQMTELGLSPDRIFYTTILNHLCKSGNIDKAYGVFSDMIEHRIT 427
Query: 63 PDSYSYNELLKGFCIVNRI 7
PD+ SYN L+ G C R+
Sbjct: 428 PDAISYNSLICGLCRACRV 446
Score = 68.6 bits (166), Expect = 1e-09
Identities = 46/188 (24%), Positives = 81/188 (43%)
Frame = -3
Query: 585 DIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMW 406
D+ +++ + C + A L M ++G +VV+YT +I A + + A +
Sbjct: 324 DVVSYSTLIETYCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGKSSVAKKLL 383
Query: 405 KFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRV 226
M + + PD ++ LC+ +D AY + + +I DA+ YN LICG CR
Sbjct: 384 DQMTELGLSPDRIFYTTILNHLCKSGNIDKAYGVFSDMIEHRITPDAISYNSLICGLCRA 443
Query: 225 GRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSY 46
R+ +A+ L M+ C PD +T+ ++ +M G D
Sbjct: 444 CRVTEAIKLFEDMQSKECCPDELTFKFIIGGLIRENKVSAAYKVWDQMMDKGFTLDRDVS 503
Query: 45 NELLKGFC 22
+ L+K C
Sbjct: 504 DTLIKASC 511
Score = 65.5 bits (158), Expect = 1e-08
Identities = 44/191 (23%), Positives = 78/191 (40%)
Frame = -3
Query: 573 FNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEAVDMWKFMI 394
+N ++ C ++ A L M + EPD+V+Y ++++ + +A + M+
Sbjct: 223 YNALISGFCKAGRIEKAEALKSFMNKIECEPDLVTYNVLLNYYYENNLLKKAEGVMTEMV 282
Query: 393 KKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGFDAVIYNVLICGFCRVGRID 214
+ V+ D + L+ C + D Y + +M + D V Y+ LI +CR
Sbjct: 283 RSGVELDAYSYNQLLKRHCRVSHPDKCYSFMVKEMEPRGFCDVVSYSTLIETYCRASNTR 342
Query: 213 KALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGMEPDSYSYNELL 34
KA L M+ G +++TY L+ +M G+ PD Y +L
Sbjct: 343 KAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGKSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 33 KGFCIVNRIDK 1
C IDK
Sbjct: 403 NHLCKSGNIDK 413
Score = 58.5 bits (140), Expect = 1e-06
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDALILLRLMGERGREPDVVSYTIVISALCKVKRHDEA 418
GIV ++ + + E A LL M E G PD + YT +++ LCK D+A
Sbjct: 355 GIVTNVVTYTSLIKAFLREGKSSVAKKLLDQMTELGLSPDRIFYTTILNHLCKSGNIDKA 414
Query: 417 VDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGK-IGFDAVIYNVLIC 241
++ MI+ + PD + +L+ GLC +V A +L DM+ K D + + +I
Sbjct: 415 YGVFSDMIEHRITPDAISYNSLICGLCRACRVTEAIKL-FEDMQSKECCPDELTFKFIIG 473
Query: 240 GFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCN 124
G R ++ A + M D G D + L+ C+
Sbjct: 474 GLIRENKVSAAYKVWDQMMDKGFTLDRDVSDTLIKASCS 512
Score = 57.8 bits (138), Expect = 2e-06
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 3/200 (1%)
Frame = -3
Query: 597 GIVPDIWAFNIYLNLLCGENLVDDAL-ILLRLMGERGREPDVVSYTIVISALCKVKRHDE 421
G+ D +++N L C + D +++ M RG DVVSY+ +I C+ +
Sbjct: 285 GVELDAYSYNQLLKRHCRVSHPDKCYSFMVKEMEPRGF-CDVVSYSTLIETYCRASNTRK 343
Query: 420 AVDMWKFMIKKDVKPDNKACRALVLGLCEIEKVDLAYELTLGDMRGKIGF--DAVIYNVL 247
A +++ M +K + + +L+ K +A +L D ++G D + Y +
Sbjct: 344 AYKLFEEMRQKGIVTNVVTYTSLIKAFLREGKSSVAKKLL--DQMTELGLSPDRIFYTTI 401
Query: 246 ICGFCRVGRIDKALTLKSFMKDNGCEPDLITYNVLLNYCCNXXXXXXXXXXXXKMQRSGM 67
+ C+ G IDKA + S M ++ PD I+YN L+ C MQ
Sbjct: 402 LNHLCKSGNIDKAYGVFSDMIEHRITPDAISYNSLICGLCRACRVTEAIKLFEDMQSKEC 461
Query: 66 EPDSYSYNELLKGFCIVNRI 7
PD ++ ++ G N++
Sbjct: 462 CPDELTFKFIIGGLIRENKV 481