BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00047077
         (883 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624...   260   9e-69
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   247   5e-66
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   247   7e-66
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   248   7e-66
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   246   9e-66
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   246   1e-65
gb|AAB82754.1| retrofit [Oryza longistaminata]                        246   1e-65
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  246   1e-65
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   244   6e-65
emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]   243   6e-65
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   243   2e-64
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   241   5e-64
emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]   239   8e-64
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   240   8e-64
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]   240   8e-64
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   237   1e-63
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   240   2e-63
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   235   2e-63
gb|AAW56918.1| putative polyprotein [Oryza sativa Japonica Group]     243   2e-63
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...   238   3e-63

>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
          Length = 1682

 Score =  260 bits (665), Expect(2) = 9e-69
 Identities = 131/276 (47%), Positives = 180/276 (65%), Gaps = 1/276 (0%)
 Frame = +3

Query: 3    PAWKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGF 182
            P W +AMQ ++QA  +N TW+LV  ++ +KV+ NKWIFK+K HADGT+   KARLVA GF
Sbjct: 334  PKWFKAMQEEFQALQNNHTWDLVLPSEPIKVVGNKWIFKIKYHADGTISRYKARLVAKGF 393

Query: 183  EQFAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQG 362
             Q  GVD+ ETFSPVVK+ST+R + +LA    WE++ +D+NNAFLNGIL ++++M QP+G
Sbjct: 394  HQTQGVDYTETFSPVVKASTVRVILSLAVMNKWELRQVDVNNAFLNGILVEDVYMGQPEG 453

Query: 363  FVDSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSL-VDMGFKRCSSDYSLFFKTSAACXX 539
            F+D   P HVCKLKK+LYGL+QAPRAW+E LK ++ V  GF+   SD SLF+K       
Sbjct: 454  FIDPSRPLHVCKLKKALYGLKQAPRAWFERLKDAMVVKWGFQNSRSDNSLFYKWIGDQVI 513

Query: 540  XXXXXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKY 719
                       TG S   V  +I  +++ F LK LG   YFLG++V  T     L Q+KY
Sbjct: 514  FVLVYVDDIIITGSSDKMVQQVITNMQNAFALKDLGKLSYFLGIEVTKTASGIYLSQSKY 573

Query: 720  LDELLQRTGMEDCNPSVTPMAVNLKLSKYTRERMNN 827
            + ++L +  M DC+P  TPMA    L+K +   ++N
Sbjct: 574  IADILAKHNMADCSPVPTPMATGHYLTKGSGSVISN 609



 Score = 27.7 bits (60), Expect(2) = 9e-69
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 836 RRTVGALQYLTLTRPD 883
           +  VGALQY+TLTRP+
Sbjct: 614 KSAVGALQYVTLTRPE 629


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  247 bits (631), Expect(2) = 5e-66
 Identities = 120/266 (45%), Positives = 167/266 (62%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            WK+AM  +Y+A M+N+TW LVP      VI  KW++K+K   DG+LD  KARLVA GF+Q
Sbjct: 951  WKKAMDIEYEALMNNKTWHLVPPKQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQ 1010

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
              G+D+ +TFSPVVK++TIR + ++A +R W ++ LD+ NAFL+G LE+ ++M QP G+ 
Sbjct: 1011 RYGIDYEDTFSPVVKAATIRIVLSIAVSRGWCMRQLDVQNAFLHGFLEEEVYMKQPPGYE 1070

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
            D  FP +VCKL K+LYGL+QAPRAWY  L   L D+GF+    D SLFF           
Sbjct: 1071 DESFPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDLGFQGSKGDTSLFFYNKGGLIIFVL 1130

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                    T      V+ +++ LK  F LK LG+  YFLG++V     E +L Q+KY  +
Sbjct: 1131 IYVDDIIVTSSRQEAVSALLQDLKKEFALKDLGDLHYFLGIEVNKVTDEIILTQDKYACD 1190

Query: 729  LLQRTGMEDCNPSVTPMAVNLKLSKY 806
            LL+R  M DC P  TP++ + KLS +
Sbjct: 1191 LLRRVNMFDCKPVSTPLSTSEKLSAH 1216



 Score = 31.6 bits (70), Expect(2) = 5e-66
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R  VGALQYLTLTRPD
Sbjct: 1230 RSVVGALQYLTLTRPD 1245


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  247 bits (630), Expect(2) = 7e-66
 Identities = 121/264 (45%), Positives = 167/264 (63%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            WK AM ++Y A + N+TW LVP      +I  KW++K+K  ADGTLD  KARLVA GF+Q
Sbjct: 679  WKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQ 738

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
              G+D+ +TFSPVVK++TIR + +LA ++ W ++ LD+ NAFL+G LE+ ++M QP GF 
Sbjct: 739  RYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFE 798

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
            D   P HVCKL K+LYGL+QAPRAW+  L   L+D+GFK   +D SLFF           
Sbjct: 799  DPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITMFVL 858

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                       S      +++ LK  F LK LG   YFLG++V   +   VL Q+KY ++
Sbjct: 859  VYVDDIIVASSSEKATAALLQNLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYAND 918

Query: 729  LLQRTGMEDCNPSVTPMAVNLKLS 800
            LL++ GM DC P+ TP++V+ KLS
Sbjct: 919  LLKKVGMIDCKPANTPLSVSEKLS 942



 Score = 31.6 bits (70), Expect(2) = 7e-66
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R  VGALQYLTLTRPD
Sbjct: 958  RSVVGALQYLTLTRPD 973


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  248 bits (634), Expect(2) = 7e-66
 Identities = 124/263 (47%), Positives = 161/263 (61%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            WK+AM A+Y A   N TW LVP     + I  KW++K K + DGT+   KARLVA GF Q
Sbjct: 949  WKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQ 1008

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
             AG DF ETFSPVVK ST+R +F +A +R+W ++ LD+NNAFLNG L++ +FM QPQGF+
Sbjct: 1009 QAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFI 1068

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
            D + P  VC+L K+LYGL+QAPRAW+E L  +L+  GF    SD SLF + +        
Sbjct: 1069 DEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVL 1128

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                     G  +  +T +I  L   F LK LG   YFLG+ V HT     L Q KY+ +
Sbjct: 1129 VYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRD 1188

Query: 729  LLQRTGMEDCNPSVTPMAVNLKL 797
            LLQ+T M  C P+ TP+   LKL
Sbjct: 1189 LLQKTKMVHCKPARTPLPTGLKL 1211



 Score = 30.0 bits (66), Expect(2) = 7e-66
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R TVGALQY+T+TRP+
Sbjct: 1226 RSTVGALQYVTITRPE 1241


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  246 bits (629), Expect(2) = 9e-66
 Identities = 121/264 (45%), Positives = 167/264 (63%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            WK AM ++Y A + N+TW LVP      +I  KW++K+K  ADGTLD  KARLVA GF+Q
Sbjct: 950  WKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQ 1009

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
              G+D+ +TFSPVVK++TIR + +LA ++ W ++ LD+ NAFL+G LE+ ++M QP GF 
Sbjct: 1010 RYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFE 1069

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
            D   P HVCKL K+LYGL+QAPRAW+  L   L+D+GFK   +D SLFF           
Sbjct: 1070 DPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFFLNKGDITMFVL 1129

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                       S      +++ LK  F LK LG   YFLG++V   +   VL Q+KY ++
Sbjct: 1130 VYVDDIIVASSSERATAALLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYAND 1189

Query: 729  LLQRTGMEDCNPSVTPMAVNLKLS 800
            LL++ GM DC P+ TP++V+ KLS
Sbjct: 1190 LLKKVGMIDCKPANTPLSVSEKLS 1213



 Score = 31.6 bits (70), Expect(2) = 9e-66
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R  VGALQYLTLTRPD
Sbjct: 1229 RSVVGALQYLTLTRPD 1244


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  246 bits (627), Expect(2) = 1e-65
 Identities = 121/264 (45%), Positives = 166/264 (62%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            WK AM ++Y A + N+TW LVP      +I  KW++K+K  ADGTLD  KARLVA GF+Q
Sbjct: 957  WKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQ 1016

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
              G+D+ +TFSPVVK++TIR + +LA ++ W ++ LD+ NAFL+G LE+ ++M QP GF 
Sbjct: 1017 RYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFE 1076

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
            D   P HVCKL K+LYGL+QAPRAW+  L   L+D+GFK    D SLFF           
Sbjct: 1077 DPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVL 1136

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                       S      +++ LK  F LK LG   YFLG++V   +   VL Q+KY ++
Sbjct: 1137 VYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYAND 1196

Query: 729  LLQRTGMEDCNPSVTPMAVNLKLS 800
            LL++ GM DC P+ TP++V+ KLS
Sbjct: 1197 LLKKVGMIDCKPANTPLSVSEKLS 1220



 Score = 31.6 bits (70), Expect(2) = 1e-65
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R  VGALQYLTLTRPD
Sbjct: 1236 RSVVGALQYLTLTRPD 1251


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  246 bits (628), Expect(2) = 1e-65
 Identities = 117/266 (43%), Positives = 166/266 (62%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            W++AM+ +Y A + N TW LVPY     +I  KW++K+K  ADGTLD  KARLVA GF+Q
Sbjct: 949  WRDAMETEYNALIKNDTWHLVPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQ 1008

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
              G+D+ +TFSPVVK++TIR + ++A +R W ++ LD+ NAFL+G LE+ ++M QP GF 
Sbjct: 1009 RYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFE 1068

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
             S  P +VCKL K+LYGL+QAPRAWY  L   LV++GF+   +D SLFF           
Sbjct: 1069 SSSKPDYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILMFVL 1128

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                       +    T +++ L   F LK LG+  YFLG++V       +L Q KY ++
Sbjct: 1129 VYVDDIIVASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYAND 1188

Query: 729  LLQRTGMEDCNPSVTPMAVNLKLSKY 806
            LL+R  M +C P  TP++V+ KL+ Y
Sbjct: 1189 LLKRVNMSNCKPVSTPLSVSEKLTLY 1214



 Score = 31.2 bits (69), Expect(2) = 1e-65
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R  VGALQYLTLTRPD
Sbjct: 1228 RSIVGALQYLTLTRPD 1243


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  246 bits (628), Expect(2) = 1e-65
 Identities = 120/266 (45%), Positives = 165/266 (62%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            WK AM+A+Y A + N TW LVPY     VI  KW++K+K  ADGTLD  KARLVA GF+Q
Sbjct: 940  WKAAMEAEYDALIKNDTWHLVPYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQ 999

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
              G+D+ +TFSPVVK++TIR + ++A +R W ++ LD+ NAFL+G LE+ ++M QP GF 
Sbjct: 1000 RYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFE 1059

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
                P +VCKL K+LYGL+QAPRAWY  L   LV++GF+   +D SLFF           
Sbjct: 1060 SFSKPNYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVL 1119

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                       +    T +++ L   F LK LG+  YFLG++V       VL Q KY ++
Sbjct: 1120 VYVDDIIIASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYAND 1179

Query: 729  LLQRTGMEDCNPSVTPMAVNLKLSKY 806
            LL+R  M +C P  TP++V+ KL+ Y
Sbjct: 1180 LLKRVNMSNCKPVSTPLSVSEKLTLY 1205



 Score = 31.2 bits (69), Expect(2) = 1e-65
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R  VGALQYLTLTRPD
Sbjct: 1219 RSIVGALQYLTLTRPD 1234


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  244 bits (622), Expect(2) = 6e-65
 Identities = 119/264 (45%), Positives = 167/264 (63%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            WK+AM A++ A  +N+TW LVP      VI  KW++K+K   DG+LD  KARLVA GF+Q
Sbjct: 751  WKKAMDAEFMALQNNKTWHLVPPQKGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQ 810

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
              G+D+ +TFSPVVK++TIR + ++A ++ W ++ LD+ NAFL+G+LE+ ++M QP G+ 
Sbjct: 811  RYGIDYEDTFSPVVKAATIRIILSIAVSKGWCMRQLDVQNAFLHGVLEEEVYMKQPPGYE 870

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
            DS  P +VCKL K+LYGL+QAPRAWY  L   L DMGF+   +D SLFF           
Sbjct: 871  DSSLPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDMGFQGSKADTSLFFYNKGDLIIFVL 930

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                    T      V  ++  L+  F LK LG+  YFLG++V    G  VL Q+KY+++
Sbjct: 931  IYVDDIIVTSSRQEAVPALLRDLQKEFALKDLGDLHYFLGIEVTKVSGGIVLTQDKYVND 990

Query: 729  LLQRTGMEDCNPSVTPMAVNLKLS 800
            LL+R  M DC P  TP++ + KLS
Sbjct: 991  LLRRVNMFDCKPVSTPLSTSEKLS 1014



 Score = 31.6 bits (70), Expect(2) = 6e-65
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R  VGALQYLTLTRPD
Sbjct: 1030 RSVVGALQYLTLTRPD 1045


>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
          Length = 731

 Score =  243 bits (620), Expect(2) = 6e-65
 Identities = 124/276 (44%), Positives = 168/276 (60%)
 Frame = +3

Query: 3    PAWKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGF 182
            P WK AM+ +Y+A M N TW+LVPY  +  V+ NKW+FK+K H D TL+  KA LVA GF
Sbjct: 287  PNWKIAMKEEYKALMRNDTWDLVPYQPQYNVVGNKWVFKLKFHLDDTLNKHKASLVAKGF 346

Query: 183  EQFAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQG 362
             Q  GVDF ET+SP +K +TIR +  LA  + WE++ LDINNAFLNG L++N+FMS+P+ 
Sbjct: 347  HQTPGVDFSETYSPAIKLATIRVVLTLAIAQGWEIRQLDINNAFLNGYLQENVFMSEPKD 406

Query: 363  FVDSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXX 542
            F+    P H+CKL+K+LYGL+QAPRAW++ LK +L+  GF+   S+ SLF          
Sbjct: 407  FIHPTKPHHICKLRKALYGLKQAPRAWFDRLKDALLQWGFQDSKSNASLFLYKIKGIKLM 466

Query: 543  XXXXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYL 722
                      TG++S  +  ++  L   F LK LG+  YFLG+     E    L Q+KY+
Sbjct: 467  PLVYVDNILITGNNSTTILDLVHDLNKSFLLKDLGSLHYFLGIKAFQDETCLNLTQSKYI 526

Query: 723  DELLQRTGMEDCNPSVTPMAVNLKLSKYTRERMNNP 830
              LLQ+T M    P  TP      LSK   + M+NP
Sbjct: 527  ANLLQKTNMAVAKPLPTPTISRKVLSKSDGDPMDNP 562



 Score = 32.3 bits (72), Expect(2) = 6e-65
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +2

Query: 818 DE*SISRRTVGALQYLTLTRPD 883
           D  ++ R TVGALQY+T+TRPD
Sbjct: 560 DNPTMYRSTVGALQYVTITRPD 581


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  243 bits (619), Expect(2) = 2e-64
 Identities = 128/264 (48%), Positives = 163/264 (61%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            WK+AM  +Y A + N TW+LVP   + K+I  KW+FKVK + DGT++  KARLVA GF Q
Sbjct: 895  WKQAMTDEYLALLRNNTWDLVPPPTDRKLIGCKWVFKVKENXDGTINKYKARLVAKGFHQ 954

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
             AG DF ETFSPVVK +TIR +  +A    W+V+ LD+NNAFLNG L ++IFM QPQGF+
Sbjct: 955  IAGFDFNETFSPVVKPTTIRIVLTIALNLQWKVRQLDVNNAFLNGDLHEDIFMHQPQGFI 1014

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
            D   P +VCKL KSLYGL+QAPRAW+E L  +L  +GF    SD SLF   +        
Sbjct: 1015 DPVNPNYVCKLNKSLYGLKQAPRAWFEKLHQALGILGFSSTKSDQSLFINITPTHSTYIL 1074

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                    TG++   V  +I  L ++F LK LG+  YFLG+ V+HT     L Q KY+  
Sbjct: 1075 VYVDDILITGNNDQFVQHVITQLNNQFALKDLGDIDYFLGIQVKHTSAGMHLSQAKYISN 1134

Query: 729  LLQRTGMEDCNPSVTPMAVNLKLS 800
            LLQ+T M       TPM  N  LS
Sbjct: 1135 LLQKTKMLHVKSVPTPMVSNQSLS 1158



 Score = 30.8 bits (68), Expect(2) = 2e-64
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R TVGALQY T+TRPD
Sbjct: 1172 RSTVGALQYATITRPD 1187


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  241 bits (614), Expect(2) = 5e-64
 Identities = 122/266 (45%), Positives = 166/266 (62%)
 Frame = +3

Query: 3    PAWKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGF 182
            P W+ AM+A++QA   N TW LVP      +I  KW+FKVK +ADG++D LKARLVA GF
Sbjct: 935  PQWRAAMEAEFQALQKNNTWTLVPPDRTRNLIDCKWVFKVKYNADGSIDRLKARLVAKGF 994

Query: 183  EQFAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQG 362
            +Q  G+D+ +TFSPVVK STIR + +LA ++ W ++ LD+ NAFL+GILE+ ++M QP G
Sbjct: 995  KQQYGIDYDDTFSPVVKHSTIRLVLSLAVSQKWSLRQLDVQNAFLHGILEETVYMKQPPG 1054

Query: 363  FVDSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXX 542
            F D+  P + C L+KSLYGL+Q PRAWY  L   L  +GF    +D SLF   + +    
Sbjct: 1055 FADTTHPNYHCHLQKSLYGLKQRPRAWYSRLSEKLQSLGFVPSKADVSLFIYNAHSTAIY 1114

Query: 543  XXXXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYL 722
                      TG S   +  ++  LKD F +K LG+  YFLG++V       +L Q KY 
Sbjct: 1115 ILVYVDDIIITGSSPHAIDNVLAKLKDDFAIKDLGDLHYFLGIEVHRKGDGLLLCQEKYA 1174

Query: 723  DELLQRTGMEDCNPSVTPMAVNLKLS 800
             +LL+R GME C P  TP+A + KLS
Sbjct: 1175 RDLLKRVGMECCKPVHTPVATSEKLS 1200



 Score = 31.6 bits (70), Expect(2) = 5e-64
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R  VGALQYLTLTRPD
Sbjct: 1216 RSVVGALQYLTLTRPD 1231


>emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]
          Length = 1635

 Score =  239 bits (611), Expect(2) = 8e-64
 Identities = 118/274 (43%), Positives = 171/274 (62%)
 Frame = +3

Query: 3    PAWKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGF 182
            P W +AM  +  A   NQTW+LV    E+ +I  KW++K+K   DG+++  KARLVA G+
Sbjct: 692  PNWIQAMDLEIXALHRNQTWDLVEQPSEVNLIGXKWVYKLKHKPDGSIERYKARLVAKGY 751

Query: 183  EQFAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQG 362
             Q  G+D+ ETFSPVVK++TIR +  +A +  WE++ LD++NAFLNG LE+ ++MSQP G
Sbjct: 752  NQTHGLDYFETFSPVVKAATIRIILTVALSFQWEIRQLDVHNAFLNGELEEQVYMSQPPG 811

Query: 363  FVDSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXX 542
            ++D+ FP  VC+LKK+LYGL+QAPRAW++ L S+L+  GF    +D S+F     +    
Sbjct: 812  YLDTTFPTKVCRLKKALYGLKQAPRAWFQRLSSALIQWGFSNSRTDSSMFLHFGESTTLI 871

Query: 543  XXXXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYL 722
                       G SS +++ +I  L   F L+ LG   YFLG++V + EG   L Q KY+
Sbjct: 872  VLVYVDDIIIXGCSSTQISSLIXKLDSIFTLRDLGQLSYFLGIEVSYHEGSMNLSQTKYV 931

Query: 723  DELLQRTGMEDCNPSVTPMAVNLKLSKYTRERMN 824
             +LL RT M D  P+ TP  V   LSK+  + M+
Sbjct: 932  SDLLHRTEMFDTKPAKTPGVVGKNLSKFDGDPMD 965



 Score = 32.0 bits (71), Expect(2) = 8e-64
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = +2

Query: 818  DE*SISRRTVGALQYLTLTRPD 883
            DE +  R  VGALQYLT+TRPD
Sbjct: 965  DEVTQYRSVVGALQYLTITRPD 986


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  240 bits (613), Expect(2) = 8e-64
 Identities = 113/266 (42%), Positives = 163/266 (61%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            W++AM+ +Y A + N TW LVPY     +I  KW++KVK  ADGTLD  K RL+A GF+Q
Sbjct: 952  WRDAMETEYNALIKNDTWHLVPYEKGQNIIGCKWVYKVKRKADGTLDRYKTRLIAKGFKQ 1011

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
              G+D+ +TFSPVVK++TIR + ++A +R W ++ LD+ N FL+G LE+ ++M QP GF 
Sbjct: 1012 RYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNDFLHGFLEEEVYMQQPPGFE 1071

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
             S  P +VCKL K+LYGL+QAPRAWY  L   L ++GF+   +D SLFF           
Sbjct: 1072 SSSKPDYVCKLNKALYGLKQAPRAWYSRLSKKLTELGFEASKADTSLFFLNKGGIIMFVL 1131

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                       +    T +++ L   F LK LG+  YFLG++V       +L Q KY ++
Sbjct: 1132 VYVDDIIVASSTEKATTALLKDLNKEFTLKDLGDLHYFLGIEVTKVSNGVILTQEKYAND 1191

Query: 729  LLQRTGMEDCNPSVTPMAVNLKLSKY 806
            +L+R  M +C P  TP++V+ KL+ Y
Sbjct: 1192 MLKRVNMSNCKPVSTPLSVSEKLTLY 1217



 Score = 31.2 bits (69), Expect(2) = 8e-64
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R  VGALQYLTLTRPD
Sbjct: 1231 RSIVGALQYLTLTRPD 1246


>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score =  240 bits (612), Expect(2) = 8e-64
 Identities = 125/278 (44%), Positives = 171/278 (61%)
 Frame = +3

Query: 3    PAWKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGF 182
            P W   M  +YQA + N TW LVP+   M VI +KWIF+VK ++DGT+   KARLVA GF
Sbjct: 502  PNWHTTMVEEYQALVRNNTWTLVPFHPSMNVIDSKWIFRVKYNSDGTIQRYKARLVAKGF 561

Query: 183  EQFAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQG 362
            +Q+AGV+F +TFSPV+K+STIR +F LA T +WE++ +D NNAFLNG + + +++SQP G
Sbjct: 562  QQYAGVEFTDTFSPVIKASTIRVVFTLAITYNWEIRQIDFNNAFLNGEITETVYLSQPAG 621

Query: 363  FVDSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXX 542
            FV +  P HVCKL+K+LYGL+QAPR W+  L+ +L   GF   +SD SLF          
Sbjct: 622  FVSTSHPQHVCKLQKALYGLKQAPRVWFHKLREALHTWGFISSTSDTSLFIYKHNGNFLL 681

Query: 543  XXXXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYL 722
                      TG++   V  +I+ L++RF LK LG  K FLG +   T     L Q+KY 
Sbjct: 682  LLVYVDDLLITGNNVPLVQTLIQDLQNRFALKDLGLVKDFLGFEALRTTTGLHLTQSKYT 741

Query: 723  DELLQRTGMEDCNPSVTPMAVNLKLSKYTRERMNNPFL 836
             +LL +T M    P  TPM+  LKL   +    ++P L
Sbjct: 742  TDLLIKTKMHSAKPVPTPMSAALKLHAASGPAFSDPTL 779



 Score = 31.6 bits (70), Expect(2) = 8e-64
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +2

Query: 827 SISRRTVGALQYLTLTRPD 883
           ++ R T+GALQYLT TRPD
Sbjct: 778 TLYRSTIGALQYLTYTRPD 796


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  237 bits (604), Expect(2) = 1e-63
 Identities = 122/276 (44%), Positives = 167/276 (60%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            W  AM+ ++ A   N TW LVP      +I  KW++K+K   DGT+D  KARLVA GF Q
Sbjct: 724  WVLAMEKEFSALQRNNTWHLVPPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQ 783

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
              G+++ ETFSPVVK+STIR + A+A + +W V  LD+ NAFL+G LE+++FM QP GF+
Sbjct: 784  TLGLBYFETFSPVVKASTIRIILAVALSFNWSVHQLDVQNAFLHGDLEEHVFMQQPPGFI 843

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
            +S++P+HVCKL K+LYGL+QAPRAWY  L +SL+  GF+   +D S+F   S        
Sbjct: 844  NSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTHDVLILL 903

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                    TG SS +V+  I  L   F L+ LG   YFLG++V  +   F L Q+KY  +
Sbjct: 904  IYVDDILVTGSSSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQD 963

Query: 729  LLQRTGMEDCNPSVTPMAVNLKLSKYTRERMNNPFL 836
            LL RT M D  P+ TP  +   LS    E  ++  L
Sbjct: 964  LLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATL 999



 Score = 33.9 bits (76), Expect(2) = 1e-63
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +2

Query: 827  SISRRTVGALQYLTLTRPD 883
            ++ R TVGALQYLTLTRPD
Sbjct: 998  TLYRSTVGALQYLTLTRPD 1016


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  240 bits (612), Expect(2) = 2e-63
 Identities = 118/275 (42%), Positives = 171/275 (62%)
 Frame = +3

Query: 3    PAWKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGF 182
            P W +AM+ +  A   N TW+LV     + VI  KW++K+K   DG+++  KARLVA G+
Sbjct: 898  PNWTKAMEMEIAALHRNHTWDLVEQPPNVNVIGCKWVYKLKHKPDGSIERYKARLVAKGY 957

Query: 183  EQFAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQG 362
             Q  G+D+ ETFSPVVK++TIR +  +A +  WE++ LD++NAFLNG LE+ ++MSQP G
Sbjct: 958  NQTHGLDYFETFSPVVKAATIRIILTVALSFKWEIRQLDVHNAFLNGELEEQVYMSQPPG 1017

Query: 363  FVDSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXX 542
            + D +FP  VC+LKK+LYGL+QAPRAW++ L S+L+  GF    +D S+F     A    
Sbjct: 1018 YFDPQFPNRVCRLKKALYGLKQAPRAWFQRLSSALLQWGFSMSRTDSSMFLHFGKATTLI 1077

Query: 543  XXXXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYL 722
                      TG SS +++ +I  L   F L+ LG   +FLG++V + EG   L Q KY+
Sbjct: 1078 VLVYVDDILVTGSSSTQISSLIAKLDSVFALRDLGQLSFFLGIEVSYNEGSMTLSQTKYI 1137

Query: 723  DELLQRTGMEDCNPSVTPMAVNLKLSKYTRERMNN 827
             +LL RT + D  P+ TP AV   LSK+  + M +
Sbjct: 1138 SDLLHRTELFDTKPANTPGAVGKNLSKFDGDPMTD 1172



 Score = 30.4 bits (67), Expect(2) = 2e-63
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R  VGALQY+TLTRPD
Sbjct: 1177 RSVVGALQYVTLTRPD 1192


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  235 bits (600), Expect(2) = 2e-63
 Identities = 119/275 (43%), Positives = 169/275 (61%)
 Frame = +3

Query: 6    AWKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFE 185
            +W +AM ++YQA + N TW LVP      ++  +WI+K+K   DG++D  KARLVA GF 
Sbjct: 870  SWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFT 929

Query: 186  QFAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGF 365
            Q  G+D+ +TFSPVVK  TIR + ALA +  W V+ LD+ NAFLNG LE+ +FM+QPQGF
Sbjct: 930  QTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVENAFLNGDLEEEVFMTQPQGF 989

Query: 366  VDSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXX 545
            V+  +P +VCKL K+LYGL+QAPRAW++ L+ +L+D GF+   +D SLF   +A      
Sbjct: 990  VNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILIL 1049

Query: 546  XXXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLD 725
                     TG +   V+  I  L+ +F L+ LG   YFLG+  Q       L Q+KY+ 
Sbjct: 1050 LVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIA 1109

Query: 726  ELLQRTGMEDCNPSVTPMAVNLKLSKYTRERMNNP 830
            +LL RT ME   P+ TP  +   LS+     +++P
Sbjct: 1110 DLLNRTQMETSKPAPTPGRLGRTLSQSDGMSLSDP 1144



 Score = 34.7 bits (78), Expect(2) = 2e-63
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            RRTVGALQY+TLTRPD
Sbjct: 1148 RRTVGALQYVTLTRPD 1163


>gb|AAW56918.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1018

 Score =  243 bits (619), Expect(2) = 2e-63
 Identities = 120/264 (45%), Positives = 165/264 (62%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            W+EAM A+YQA M NQTW LVP      +I  KW++KVK  ADG+LD  KARLVA GF+Q
Sbjct: 570  WREAMDAEYQALMKNQTWHLVPPQQGRNIIDCKWVYKVKRKADGSLDRYKARLVAKGFKQ 629

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
              G+D+ +TFSPVVK++TIR + ++  +R W ++ LD+ NAFL+GILE+ ++M Q  G+ 
Sbjct: 630  RYGIDYEDTFSPVVKATTIRTILSITVSRGWSLRQLDVQNAFLHGILEEEVYMKQTPGYE 689

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
            +SKFP H+CKL K++YGL+QAPRAWY  L + L  +GFK    D SLFF +         
Sbjct: 690  NSKFPNHICKLDKAIYGLKQAPRAWYSRLSTKLQALGFKPSKVDTSLFFYSKGDVTVFVL 749

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                       +    + ++  L   F LK L    YFLG++V  TE   +L Q KY  +
Sbjct: 750  IYVDDIIVASSTPSATSALLRDLTKEFALKDLRELHYFLGIEVTRTEDGILLTQAKYAYD 809

Query: 729  LLQRTGMEDCNPSVTPMAVNLKLS 800
            +L+R GM+DC P  TP+  + KLS
Sbjct: 810  VLRRVGMQDCKPVNTPLLTSEKLS 833



 Score = 27.3 bits (59), Expect(2) = 2e-63
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +2

Query: 836 RRTVGALQYLTLTRPD 883
           R  VGALQYLTLTR D
Sbjct: 849 RSIVGALQYLTLTRLD 864


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score =  238 bits (607), Expect(2) = 3e-63
 Identities = 117/264 (44%), Positives = 164/264 (62%)
 Frame = +3

Query: 9    WKEAMQAKYQAFMDNQTWELVPYTDEMKVISNKWIFKVKTHADGTLDWLKARLVAWGFEQ 188
            WKEAM A+Y A ++N+TW LVP      VI  KW++KVK  ADG+LD  KARLVA GF+Q
Sbjct: 897  WKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQ 956

Query: 189  FAGVDFLETFSPVVKSSTIRFMFALAATRSWEVQ*LDINNAFLNGILEDNIFMSQPQGFV 368
              G+D+ +TFSPVVK++TIR + +LA +R W ++ LD+ NAFL+G+LE+ ++M QP G+ 
Sbjct: 957  RYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYE 1016

Query: 369  DSKFPAHVCKLKKSLYGLQQAPRAWYETLKSSLVDMGFKRCSSDYSLFFKTSAACXXXXX 548
                P +VCKL K+LYGL+QAPRAWY  L + L ++GF    +D SLFF           
Sbjct: 1017 KKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLL 1076

Query: 549  XXXXXXXXTGDSSGEVT*MIELLKDRFKLKHLGNAKYFLGVDVQHTEGEFVLRQNKYLDE 728
                            + +++ L   F LK LG+  YFLG++V   +   +L Q KY  +
Sbjct: 1077 IYVDDIIVASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASD 1136

Query: 729  LLQRTGMEDCNPSVTPMAVNLKLS 800
            LL+R GM +C P  TP++ + KLS
Sbjct: 1137 LLRRVGMYECKPVSTPLSTSEKLS 1160



 Score = 31.6 bits (70), Expect(2) = 3e-63
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +2

Query: 836  RRTVGALQYLTLTRPD 883
            R  VGALQYLTLTRPD
Sbjct: 1176 RSVVGALQYLTLTRPD 1191