BLASTX nr result

ID: Mentha23_contig00046883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00046883
         (445 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU29292.1| hypothetical protein MIMGU_mgv1a021577mg, partial...    70   3e-10
ref|XP_006351104.1| PREDICTED: F-box protein SKIP23-like [Solanu...    58   1e-06
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    57   3e-06

>gb|EYU29292.1| hypothetical protein MIMGU_mgv1a021577mg, partial [Mimulus
           guttatus]
          Length = 292

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 46/142 (32%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
 Frame = +1

Query: 4   QLAFCRPGYSSWRCIKDR-THAEFIDVTCVKDQIFALSFMGTLVLVDIDSLGVTAVSGQD 180
           +LA  RPGY+SW  +K+  T  +F+ V   KD+IFAL   G+L                 
Sbjct: 153 RLALYRPGYTSWTIVKETATLNQFLCVAFRKDRIFALCKAGSLS---------------- 196

Query: 181 PPRNVALSLLIGGSDRISLAESSGNLWMVYQHHEGHQWRSRVESTSFLVYNFDFHKKQWI 360
                      G  + + L ES G++  VY   + ++    V S  F VY  DF  KQW+
Sbjct: 197 -----------GKFNHLMLVESRGDILTVYTQQDSNRCGFPVGSVHFFVYALDFINKQWV 245

Query: 361 RLMDLGSNTIFVGGDNSCIAVC 426
            + DLG+ +IFV   + C+ VC
Sbjct: 246 EVRDLGNRSIFV-DKSGCVVVC 266


>ref|XP_006351104.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
          Length = 433

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
 Frame = +1

Query: 19  RPGYSSWRCIKDRTHAEFIDVTCVKDQIFALSFMGTLVLVDIDSLGVTAVSGQDPPRNVA 198
           + G   W  +KDR+ A+ +D+   K   +A+   G  ++ D  S   T VS     + ++
Sbjct: 194 KSGDEKWTALKDRS-AKIVDIIVYKGDFYAVDTYGETIMYDPSSFNETNVSSN--VKGLS 250

Query: 199 LSLLIGGSDRISLAESSGNLWMVYQ----------HHEGHQWRSRVESTSFLVYNFDFHK 348
            S+  G   +  L ES G L++V            H     W+S  E     +Y  D  +
Sbjct: 251 SSIFNGWGSKKRLVESGGELFLVDMFLDTDVKAELHGSQPSWKSPKE---IKIYQLDEEQ 307

Query: 349 KQWIRLMDLGSNTIFVGGDNSCIAVCSAHY 438
            QWI +  LG + IF  GD+ C +V S+ +
Sbjct: 308 HQWIAVHTLG-DRIFFAGDDCCFSVSSSDF 336


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
 Frame = +1

Query: 4   QLAFCRPGYSSWRCIKDRTHAEFIDVTCVKDQIFALSFMGTLVLVDIDSLGVTAVSGQDP 183
           +LA  R G   W  I D   + + DV     + +A+   G  V+VD+         G  P
Sbjct: 180 KLAMFRSGDKKWMIIDDM-QSPYDDVIFFDGKFYAVDNTGRTVVVDV-------ADGSSP 231

Query: 184 PRNVALSLLIGGSDRISLAESSGNLWMV-----YQHHEGHQWRSRVEST-SFLVYNFDFH 345
             N+A S + GG  ++ L ES G L +V       H +    R  +E    F V+  D  
Sbjct: 232 VVNLAASSVFGGDKKV-LVESEGELLLVDTYFTMYHDDDEHVRWMIERMIHFKVFRLDQR 290

Query: 346 KKQWIRLMDLGSNTIFVGGDNSCIAVCSAHY 438
           +++W+ +  LG   +F+G D+S  A  S  Y
Sbjct: 291 EQKWVEIESLGDRLLFLGDDSSFSARASDFY 321


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