BLASTX nr result

ID: Mentha23_contig00046852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00046852
         (504 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006582707.1| PREDICTED: putative ribonuclease H protein A...    56   5e-06
ref|XP_006603207.1| PREDICTED: uncharacterized protein LOC100779...    56   6e-06
ref|XP_006574159.1| PREDICTED: uncharacterized protein LOC102668...    55   8e-06

>ref|XP_006582707.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 507

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   LGEGREAAFWEGTWA-GGIKVRDLFPRLFHLNLKQEGVVKEMGXXXXXXXXXXXXXXXXX 178
           +G G +  FWE +W  GGI ++D FP L+ ++ ++  +V +MG                 
Sbjct: 398 VGRGDQILFWEDSWVDGGIPLKDQFPELYQISYQRLQIVADMGSFFENGWEWTFSWRQNL 457

Query: 179 XXXXXXXXXXXXQFLSEFSPIVGAADRWSWGMDSNGIYSVKVAY 310
                         ++  S  V   D W WG +SNGI+S K AY
Sbjct: 458 FDSEMGIASIFIYQIAAISLNVNLKDTWVWGAESNGIFSTKSAY 501


>ref|XP_006603207.1| PREDICTED: uncharacterized protein LOC100779882 [Glycine max]
          Length = 299

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/151 (23%), Positives = 53/151 (35%), Gaps = 1/151 (0%)
 Frame = +2

Query: 2   LGEGREAAFWEGTWA-GGIKVRDLFPRLFHLNLKQEGVVKEMGXXXXXXXXXXXXXXXXX 178
           LG G +  FWE +W  GG +++D FP L+ ++ ++   V  MG                 
Sbjct: 12  LGRGDQILFWEDSWVEGGTRLKDKFPELYQVSSQKLQTVASMGSFCESGWEWSFSWRRNL 71

Query: 179 XXXXXXXXXXXXQFLSEFSPIVGAADRWSWGMDSNGIYSVKVAYKEMLNGRSNSST*RPS 358
                          +  SP     D W WG D  GI+S   AY  +     +       
Sbjct: 72  FDNEMGRASKFIDQTAAISPSASLKDSWVWGADPKGIFSTNFAYLHVKAEHLDED----Q 127

Query: 359 VMGLNRXXXXXXXXXXXXXXXRLIWNRLPPK 451
            +G                  RL+W+RLP K
Sbjct: 128 SLGFQHLWNIKIPPRALVFAWRLLWDRLPTK 158


>ref|XP_006574159.1| PREDICTED: uncharacterized protein LOC102668972 [Glycine max]
          Length = 287

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 37/151 (24%), Positives = 57/151 (37%), Gaps = 1/151 (0%)
 Frame = +2

Query: 2   LGEGREAAFWEGTWAG-GIKVRDLFPRLFHLNLKQEGVVKEMGXXXXXXXXXXXXXXXXX 178
           LG G +  FWE +W G GI +RD +P L+ ++ ++  +V+ M                  
Sbjct: 12  LGSGDQILFWEDSWVGDGITLRDKYPELYQISSQKFQIVESMESFGEAGWEWEFSWRRNL 71

Query: 179 XXXXXXXXXXXXQFLSEFSPIVGAADRWSWGMDSNGIYSVKVAYKEMLNGRSNSST*RPS 358
                       +  +  SP     D W WG D  GI++   AY  +   +      R  
Sbjct: 72  FDNELGRASAFIEQATALSPNATLKDYWVWGADPKGIFTTSTAYLCIKGDQPIGHLNR-- 129

Query: 359 VMGLNRXXXXXXXXXXXXXXXRLIWNRLPPK 451
             G N+               RL+W+RLP K
Sbjct: 130 --GFNQLWEIKVPPRALSFAWRLLWDRLPTK 158


Top