BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00046721
         (642 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]   270   4e-70
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       267   2e-69
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]   263   3e-68
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]   240   3e-61
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   226   5e-57
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     226   6e-57
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...   222   9e-56
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   221   1e-55
ref|XP_006471604.1| PREDICTED: leucoanthocyanidin dioxygenase-li...   221   1e-55
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   221   2e-55
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     221   2e-55
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        219   6e-55
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   219   7e-55
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   216   4e-54
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   216   6e-54
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]     216   6e-54
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   214   2e-53
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D...   210   3e-52
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...   206   4e-51
emb|CDF77009.1| hypothetical transposable element-related protei...   201   1e-49

>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
          Length = 633

 Score =  270 bits (689), Expect = 4e-70
 Identities = 140/222 (63%), Positives = 173/222 (77%), Gaps = 10/222 (4%)
 Frame = -1

Query: 636 VVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGLS 457
           VV LVLYVDDI LIGN + +L+S+K WLS+ F MKDLGEAA+ILGIK++ N +K+M+GLS
Sbjct: 300 VVFLVLYVDDILLIGNCIGMLTSVKDWLSQRFDMKDLGEAAHILGIKLMRNRKKKMIGLS 359

Query: 456 QASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMYV 277
           QA YIDT++ RF+MQ +KKGFLPFRHGI LSK+   KT  EI+ MK VPYASAVGSLMY 
Sbjct: 360 QALYIDTILNRFNMQGSKKGFLPFRHGIXLSKDQSPKTPEEIESMKAVPYASAVGSLMYA 419

Query: 276 MLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQYRSDELITIGYTDL 121
           MLCTRPDI +A+G + R+QSN G+E   AV        RTRD++L ++S+ L  IGYTD 
Sbjct: 420 MLCTRPDICFAVGMVSRFQSNXGREHWXAVKHIIKYLKRTRDYMLVFQSENLXPIGYTDS 479

Query: 120 DFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
           DFQ+D+D RKST+G VF LG GAI WRS+K   +A+STMEAE
Sbjct: 480 DFQSDQDSRKSTSGNVFXLGGGAISWRSIKQTXVADSTMEAE 521


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  267 bits (683), Expect = 2e-69
 Identities = 134/222 (60%), Positives = 171/222 (77%), Gaps = 10/222 (4%)
 Frame = -1

Query: 636  VVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGLS 457
            V  L+LYVDDI LIGN+V  L+ +K WL+  F+MKDLGEA YILGI+++ N + + L +S
Sbjct: 995  VAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMS 1054

Query: 456  QASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMYV 277
            QASYID V++R+ MQN+KKG LPFRHGI LSKE C KT  E++DM+ +PY+SAVGSLMY 
Sbjct: 1055 QASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYA 1114

Query: 276  MLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQYRSDELITIGYTDL 121
            MLCTRPDI Y++G + RYQSNPG++   AV        RTR+++L Y + +LI  GYTD 
Sbjct: 1115 MLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGYTDS 1174

Query: 120  DFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            DFQ+D+D RKST+G VFTL  GA++WRSVK  CIA+STMEAE
Sbjct: 1175 DFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAE 1216


>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
          Length = 668

 Score =  263 bits (673), Expect = 3e-68
 Identities = 138/222 (62%), Positives = 170/222 (76%), Gaps = 10/222 (4%)
 Frame = -1

Query: 636  VVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGLS 457
            VV LVLYVDDI LIGN+V  LS +K WL+  F+MKDLGEA+YILGI++  + + R+L LS
Sbjct: 335  VVFLVLYVDDILLIGNDVESLSKVKNWLASQFQMKDLGEASYILGIQMTRDRKNRLLALS 394

Query: 456  QASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMYV 277
            QA+YID V+ +F+M+N+KKG LP RHG+ LSKE C KT  + + M+ VPYASAVGSLMY 
Sbjct: 395  QAAYIDKVLVKFAMENSKKGNLPSRHGVHLSKEQCPKTPQDEEKMRRVPYASAVGSLMYA 454

Query: 276  MLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQYRSDELITIGYTDL 121
            MLCTRPDI +A+G + RYQSNPG +  +AV        RTR+++L Y   ELI IGYTD 
Sbjct: 455  MLCTRPDICFAVGVVSRYQSNPGLDHWVAVKHILKYLRRTRNYMLVYSGRELIPIGYTDS 514

Query: 120  DFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            DFQ+DRD RKST+  VFTLG GAIIWRSVK  C+A+STMEAE
Sbjct: 515  DFQSDRDSRKSTSEAVFTLGGGAIIWRSVKQTCVADSTMEAE 556


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score =  240 bits (612), Expect = 3e-61
 Identities = 122/191 (63%), Positives = 150/191 (78%), Gaps = 10/191 (5%)
 Frame = -1

Query: 543  FKMKDLGEAAYILGIKVIINHQKRMLGLSQASYIDTVIARFSMQNAKKGFLPFRHGIALS 364
            F MK LGEAA+ILGIK++ N +KRM+GLSQA YIDT++ RF+MQ +KKGFLPFRHGI LS
Sbjct: 983  FDMKYLGEAAHILGIKLMRNRKKRMIGLSQALYIDTILNRFNMQGSKKGFLPFRHGIVLS 1042

Query: 363  KEMCQKTQNEIDDMKVVPYASAVGSLMYVMLCTRPDIYYAMGYMVRYQSNPGQED*MAV- 187
            K+   KT  EI+ MK VPYASAVGSLMY MLCTRPDIY+A+G + R+QSNPG+E   AV 
Sbjct: 1043 KDQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDIYFAVGMVSRFQSNPGREHWTAVK 1102

Query: 186  -------RTRDHVLQYRSDELITIGYTDLDFQADRDERKSTTGYVFTLGYGAIIWRSVK- 31
                   RTRD++L ++S+ L+ IGYTD DFQ+D+D RKST+G VF LG GAI WRS+K 
Sbjct: 1103 HIIKYLKRTRDYMLVFQSENLVPIGYTDSDFQSDQDSRKSTSGNVFVLGGGAISWRSIKQ 1162

Query: 30   -CIANSTMEAE 1
             C+A+ TMEAE
Sbjct: 1163 TCVADFTMEAE 1173


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  226 bits (576), Expect = 5e-57
 Identities = 116/224 (51%), Positives = 158/224 (70%), Gaps = 11/224 (4%)
 Frame = -1

Query: 639  SVVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGL 460
            ++V L+LYVDDI LIGN++++L S+K  L   F MKDLGEAAYILGI++  +  KR++GL
Sbjct: 855  ALVFLILYVDDILLIGNDISMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGL 914

Query: 459  SQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMY 280
            SQ++YID V+ RF+MQ++KKGFLP  HGI L K  C +T +E + M V+PYASA+GS+MY
Sbjct: 915  SQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMY 974

Query: 279  VMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQY-RSDELITIGYT 127
             MLCTRPD+ YA+    RYQS+PG+   +AV        RT+D  L Y   +EL+  GYT
Sbjct: 975  AMLCTRPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLAYGGQEELVVNGYT 1034

Query: 126  DLDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            D  FQ D+D+ +S +G+VF L  GA+ W+S K   + +ST EAE
Sbjct: 1035 DASFQIDKDDFRSQSGFVFCLNGGAVSWKSSKQDIVVDSTTEAE 1078


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  226 bits (575), Expect = 6e-57
 Identities = 117/224 (52%), Positives = 157/224 (70%), Gaps = 11/224 (4%)
 Frame = -1

Query: 639  SVVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGL 460
            ++V L+LYVDDI LIGN++ +L S+K  L   F MKDLGEAAYILGI++  +  KR++GL
Sbjct: 984  AIVFLILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGL 1043

Query: 459  SQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMY 280
            SQ++YID V+ RF+M ++KKGFLP  HGI LSK  C +T +E + M +VPYASA+GS+MY
Sbjct: 1044 SQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMY 1103

Query: 279  VMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQYRSDE-LITIGYT 127
             MLCTRPD+ YA+    RYQS+PG+    AV        RT+D  L Y  +E L+  GYT
Sbjct: 1104 AMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYGGEEDLVVSGYT 1163

Query: 126  DLDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            D  FQ D+D+ +S +G+VF L  GA+ W+S K   +A+ST EAE
Sbjct: 1164 DASFQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAE 1207


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77550379|gb|ABA93176.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 938

 Score =  222 bits (565), Expect = 9e-56
 Identities = 115/224 (51%), Positives = 157/224 (70%), Gaps = 11/224 (4%)
 Frame = -1

Query: 639  SVVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGL 460
            ++V L+LYVDDI LI N++ +L S+K  L   F MKDLGEAAYILGI++  +  KR++GL
Sbjct: 703  ALVFLILYVDDILLIENDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYKDRSKRLIGL 762

Query: 459  SQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMY 280
            SQ++YID V+ RF+MQ++KKGFLP  HGI L K  C +T NE + M V+PYASA+GS+MY
Sbjct: 763  SQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTNERNKMSVIPYASAIGSIMY 822

Query: 279  VMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQY-RSDELITIGYT 127
             MLCTRPD+ YA+    +YQS+PG+   +A+        RT+D  L Y   +EL+  GYT
Sbjct: 823  AMLCTRPDVSYALSATSQYQSDPGESHWIALKNILKYLRRTKDMFLVYGGQEELVVNGYT 882

Query: 126  DLDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            D  FQ D+D+ +S +G+VF L  GA+ W+S K   +A+ST EAE
Sbjct: 883  DASFQIDKDDFRSQSGFVFYLNGGAVSWKSSKQDTVADSTTEAE 926


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  221 bits (564), Expect = 1e-55
 Identities = 114/224 (50%), Positives = 155/224 (69%), Gaps = 11/224 (4%)
 Frame = -1

Query: 639  SVVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGL 460
            ++V+L+LYVDDI L+GN++ +L S+K  L + F MKDLG+AAYILGI++  +  KR++GL
Sbjct: 564  TLVILILYVDDILLVGNDIPMLESVKSSLRKSFSMKDLGDAAYILGIRIYRDRSKRLIGL 623

Query: 459  SQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMY 280
            SQ  YID V+ RF+MQN+K+GFLP  HGI LSK  C  T +E D M  +PYASA+GS+MY
Sbjct: 624  SQEMYIDKVLNRFNMQNSKRGFLPMAHGINLSKNQCPTTTDERDKMSDIPYASAIGSIMY 683

Query: 279  VMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQYRSD-ELITIGYT 127
             M+CTRPD+ YA+    RYQ++P +    AV        RT+D  L Y  D EL+  GYT
Sbjct: 684  AMICTRPDVSYALSVTSRYQADPSEGHWTAVKNILKYLRRTKDVFLVYGGDEELVVNGYT 743

Query: 126  DLDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            D  FQ D+D+ +S +G+VF L  GA+ W+S K   +A+ST EAE
Sbjct: 744  DASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTEAE 787


>ref|XP_006471604.1| PREDICTED: leucoanthocyanidin dioxygenase-like [Citrus sinensis]
          Length = 629

 Score =  221 bits (563), Expect = 1e-55
 Identities = 112/191 (58%), Positives = 140/191 (73%), Gaps = 10/191 (5%)
 Frame = -1

Query: 543 FKMKDLGEAAYILGIKVIINHQKRMLGLSQASYIDTVIARFSMQNAKKGFLPFRHGIALS 364
           F +KDLGE +YILGIK++ + + + L LSQA YID ++ARFSM+N+K G LPFRHGI  S
Sbjct: 387 FDLKDLGETSYILGIKLLRDRKNKTLALSQAVYIDKILARFSMENSKTGLLPFRHGITFS 446

Query: 363 KEMCQKTQNEIDDMKVVPYASAVGSLMYVMLCTRPDIYYAMGYMVRYQSNPGQED*MAV- 187
           K+   KT  EI+ M+ VPYA A+GSLMY MLCTRPDIY+A+G + RYQ NPG +   A+ 
Sbjct: 447 KDQSPKTSEEIERMRRVPYAEAMGSLMYAMLCTRPDIYFAVGIVSRYQFNPGPQYWTAIK 506

Query: 186 -------RTRDHVLQYRSDELITIGYTDLDFQADRDERKSTTGYVFTLGYGAIIWRSVK- 31
                  RT++++L Y  DELI +GYTD DF +DRD  KST+GYVF LG GAI WRSVK 
Sbjct: 507 HIIKYLKRTKNYMLMYFGDELIPVGYTDSDFMSDRDSGKSTSGYVFALGSGAISWRSVKQ 566

Query: 30  -CIANSTMEAE 1
            CIA+ST EAE
Sbjct: 567 SCIADSTTEAE 577


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  221 bits (562), Expect = 2e-55
 Identities = 116/224 (51%), Positives = 157/224 (70%), Gaps = 11/224 (4%)
 Frame = -1

Query: 639  SVVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGL 460
            ++V L+LYVDDI LIGN++ +L S+K  L   F MKDLGEAAYILGI++  +  KR++GL
Sbjct: 933  ALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGL 992

Query: 459  SQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMY 280
            SQ++YID V+ RF+MQ++KKGFLP  HGI L K  C +T +E + M V+PYASA+GS+MY
Sbjct: 993  SQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMY 1052

Query: 279  VMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQY-RSDELITIGYT 127
             MLCTR D+ YA+    RYQS+ G+   +AV        RT+D  L Y R +EL+  GYT
Sbjct: 1053 AMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYT 1112

Query: 126  DLDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            D  FQ D+D+ +S +G+VF L  GA+ W+S K   +A+ST EAE
Sbjct: 1113 DASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAE 1156


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  221 bits (562), Expect = 2e-55
 Identities = 116/224 (51%), Positives = 157/224 (70%), Gaps = 11/224 (4%)
 Frame = -1

Query: 639  SVVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGL 460
            ++V L+LYVDDI LIGN++ +L S+K  L   F MKDLGEAAYILGI++  +  KR++GL
Sbjct: 846  ALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGL 905

Query: 459  SQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMY 280
            SQ++YID V+ RF+MQ++KKGFLP  HGI L K  C +T +E + M V+PYASA+GS+MY
Sbjct: 906  SQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMY 965

Query: 279  VMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQY-RSDELITIGYT 127
             MLCTR D+ YA+    RYQS+ G+   +AV        RT+D  L Y R +EL+  GYT
Sbjct: 966  AMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYT 1025

Query: 126  DLDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            D  FQ D+D+ +S +G+VF L  GA+ W+S K   +A+ST EAE
Sbjct: 1026 DASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAE 1069


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  219 bits (558), Expect = 6e-55
 Identities = 114/224 (50%), Positives = 154/224 (68%), Gaps = 11/224 (4%)
 Frame = -1

Query: 639  SVVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGL 460
            ++V L+LYVDDI LIGN++ +L S+K  L   F MKDLGEAAYILGI++  +  KR++GL
Sbjct: 706  ALVFLILYVDDILLIGNDIPILESVKTLLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGL 765

Query: 459  SQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMY 280
            SQ++YID V+ RF+MQ++KKGFLP  H I L K  C +T +E + M V+PYASA+GS+MY
Sbjct: 766  SQSTYIDKVLKRFNMQDSKKGFLPMSHDINLGKNQCPQTTDERNKMSVIPYASAIGSIMY 825

Query: 279  VMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQY-RSDELITIGYT 127
             MLCT PD+ YA+    RYQS+PG+   +AV        RT D  L Y   +EL+  GYT
Sbjct: 826  AMLCTCPDVSYALSATNRYQSDPGESHWIAVKNILKYLRRTEDMFLVYGGQEELVVNGYT 885

Query: 126  DLDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            D  FQ D+D+ +S +G+VF L  G + W+S K   +A+ST EAE
Sbjct: 886  DASFQTDKDDFRSRSGFVFCLNGGVVSWKSSKQDTVADSTTEAE 929


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  219 bits (557), Expect = 7e-55
 Identities = 114/220 (51%), Positives = 152/220 (69%), Gaps = 11/220 (5%)
 Frame = -1

Query: 627  LVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGLSQAS 448
            LVLYVDDI LIGN++ +L S+K  L   F MKDLGEAAYILGI++  +  KR++GLSQ++
Sbjct: 722  LVLYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 781

Query: 447  YIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMYVMLC 268
            YID V+ RF+MQ++KKGFLP  HGI L K  C +T +E + M V+PYASA+GS+MY MLC
Sbjct: 782  YIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLC 841

Query: 267  TRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQY-RSDELITIGYTDLDF 115
            T PD+ YA+    RYQS+PG+   +AV        RT+D  L Y   +EL+  GYTD  F
Sbjct: 842  THPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELVVKGYTDASF 901

Query: 114  QADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            Q D+D+ +S +G+VF L  GA+ W+S K   + +S  EAE
Sbjct: 902  QTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVVDSITEAE 941


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  216 bits (551), Expect = 4e-54
 Identities = 114/224 (50%), Positives = 154/224 (68%), Gaps = 11/224 (4%)
 Frame = -1

Query: 639  SVVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGL 460
            ++V+L+LYVDDI LIGN++ +L S+K  L   F MKDLGEAAYILGIK+  +  +R++GL
Sbjct: 980  TLVILILYVDDILLIGNDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGL 1039

Query: 459  SQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMY 280
            SQ++YID V+ RF+MQN KKGFLP  HGI+ SK     T +E D M  +PYASA+GS+MY
Sbjct: 1040 SQSTYIDKVLIRFNMQNTKKGFLPMSHGISPSKSQRPSTTDERDRMNGIPYASAIGSIMY 1099

Query: 279  VMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQYRSD-ELITIGYT 127
             M+CTR D+ YA+    RYQ++PG+    AV        RT+D  L Y  D EL+  GYT
Sbjct: 1100 AMICTRQDVSYALSVTSRYQADPGECHWTAVKNILKYLRRTKDAFLIYGGDEELVVNGYT 1159

Query: 126  DLDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            D  FQ D+D+ +S +G+VF L  GA+ W+S K   +A+ST +AE
Sbjct: 1160 DASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTKAE 1203


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  216 bits (549), Expect = 6e-54
 Identities = 113/224 (50%), Positives = 153/224 (68%), Gaps = 11/224 (4%)
 Frame = -1

Query: 639  SVVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGL 460
            ++V L+LYVDDI LIGN++ +L S+   L   F MKDLGEAAYILGI++  +  KR++GL
Sbjct: 907  ALVFLILYVDDILLIGNDIPMLESVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLIGL 966

Query: 459  SQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMY 280
            S+++YID V+  F+MQ++KKGFLP  HGI L+K  C +T NE + M V+PYASA+GS+MY
Sbjct: 967  SESTYIDKVLKMFNMQDSKKGFLPMSHGINLNKNQCLQTTNEQNKMSVIPYASAIGSIMY 1026

Query: 279  VMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQY-RSDELITIGYT 127
             MLCTRPD+ Y +    RYQS+P +   +AV        RT+D  L Y   +EL+  GYT
Sbjct: 1027 AMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYT 1086

Query: 126  DLDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            D  FQ D+D+ +S +G+VF L   A+ W+S K    ANST EAE
Sbjct: 1087 DASFQTDKDDFRSQSGFVFCLNGSAVSWKSSKQDTAANSTTEAE 1130


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  216 bits (549), Expect = 6e-54
 Identities = 113/224 (50%), Positives = 153/224 (68%), Gaps = 11/224 (4%)
 Frame = -1

Query: 639  SVVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGL 460
            ++V L+LYVDDI LIGN++ +L S+   L   F MKDLGEAAYILGI++  +  KR++GL
Sbjct: 849  ALVFLILYVDDILLIGNDIPMLESVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLIGL 908

Query: 459  SQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMY 280
            S+++YID V+  F+MQ++KKGFLP  HGI L+K  C +T NE + M V+PYASA+GS+MY
Sbjct: 909  SESTYIDKVLKMFNMQDSKKGFLPMSHGINLNKNQCLQTTNEQNKMSVIPYASAIGSIMY 968

Query: 279  VMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQY-RSDELITIGYT 127
             MLCTRPD+ Y +    RYQS+P +   +AV        RT+D  L Y   +EL+  GYT
Sbjct: 969  AMLCTRPDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYT 1028

Query: 126  DLDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            D  FQ D+D+ +S +G+VF L   A+ W+S K    ANST EAE
Sbjct: 1029 DASFQTDKDDFRSQSGFVFCLNGSAVSWKSSKQDTAANSTTEAE 1072


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  214 bits (544), Expect = 2e-53
 Identities = 110/224 (49%), Positives = 151/224 (67%), Gaps = 11/224 (4%)
 Frame = -1

Query: 639  SVVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGL 460
            +V  LVLYVDDI L+GN++ +L S+K WL   F MKD+GEAAYILGI++  +   +++GL
Sbjct: 631  AVAFLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGL 690

Query: 459  SQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMY 280
            SQ +YID V+ RF+M ++KKGF+P  HGI LSK  C  T +E + M  +PYASA+GS+MY
Sbjct: 691  SQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMY 750

Query: 279  VMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQY-RSDELITIGYT 127
             ML TRPD+  A+    RYQS+PG+   + V        RT+D  L Y  S+EL+  GYT
Sbjct: 751  AMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYT 810

Query: 126  DLDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            D  FQ D+D+ +S +G+ F L  GA+ W+S K   +A+ST EAE
Sbjct: 811  DASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAE 854


>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
          Length = 1303

 Score =  210 bits (535), Expect = 3e-52
 Identities = 114/226 (50%), Positives = 152/226 (67%), Gaps = 12/226 (5%)
 Frame = -1

Query: 642  GSVV-LLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRML 466
            GS+V  LVLYVDDI L+GN++  L  +K WL + F MKDLGEAAYILGI+++ + +KR++
Sbjct: 965  GSIVTFLVLYVDDILLMGNDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLI 1024

Query: 465  GLSQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSL 286
            GLSQ +Y++ V+ RFSM+N+KKG LP +    LSK     T  EI +M  VPYASAVGS+
Sbjct: 1025 GLSQGTYLEKVLKRFSMENSKKGELPIQSNAKLSKTQSPSTDEEIAEMSRVPYASAVGSI 1084

Query: 285  MYVMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQY-RSDELITIG 133
            MY M CTRPD+ +A+  + RYQ NPG+   +AV        RT++ VL    SD L   G
Sbjct: 1085 MYAMTCTRPDVAFALSMVSRYQGNPGRAHWIAVKNILKYLRRTKNMVLVLGGSDTLRVEG 1144

Query: 132  YTDLDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
            YTD  FQ DRD  +S +G+VF L  GA+ W+S K   +A+ST E+E
Sbjct: 1145 YTDASFQTDRDSGRSQSGWVFLLNGGAVTWKSSKQETVADSTCESE 1190


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score =  206 bits (525), Expect = 4e-51
 Identities = 107/219 (48%), Positives = 148/219 (67%), Gaps = 9/219 (4%)
 Frame = -1

Query: 639  SVVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGL 460
            ++V L+LYVDDI LIGN++ +L S+K  L   F MKDLGEAAYI+GI++  +  KR++GL
Sbjct: 1448 ALVFLILYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYIMGIRIYRDRSKRLIGL 1507

Query: 459  SQASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMY 280
            SQ++YID V+ RF+MQ++KKGFLP  HGI   K  C +T +E + M V+PYA A+GS+MY
Sbjct: 1508 SQSTYIDKVLKRFNMQDSKKGFLPMSHGINHGKNQCPQTTDERNKMSVIPYAWAIGSIMY 1567

Query: 279  VMLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQY-RSDELITIGYT 127
             MLCTR D+ YA+    RYQS+PG+   +AV        RT+D  L Y   +EL+  GY 
Sbjct: 1568 AMLCTRIDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGGQEELVVNGYI 1627

Query: 126  DLDFQADRDERKSTTGYVFTLGYGAIIWRSVKCIANSTM 10
            D  FQ D+D+ +  +G+VF L   A+ W+SV   A+S M
Sbjct: 1628 DASFQTDKDDFRLQSGFVFCLNGRAVSWKSVMTSASSPM 1666


>emb|CDF77009.1| hypothetical transposable element-related protein, partial [Boechera
            divaricarpa]
          Length = 1350

 Score =  201 bits (512), Expect = 1e-49
 Identities = 111/223 (49%), Positives = 145/223 (65%), Gaps = 11/223 (4%)
 Frame = -1

Query: 636  VVLLVLYVDDIHLIGNNVNVLSSIKGWLSE*FKMKDLGEAAYILGIKVIINHQKRMLGLS 457
            ++ LVLYVDDI L  N++N+L  IK +L + F+MKDLGEA+++LGI++I +  + +L LS
Sbjct: 1018 LIFLVLYVDDILLATNDINMLHEIKNFLKDNFEMKDLGEASFVLGIQIIRDRNQGILRLS 1077

Query: 456  QASYIDTVIARFSMQNAKKGFLPFRHGIALSKEMCQKTQNEIDDMKVVPYASAVGSLMYV 277
            Q +YID V+ RF M + K G  P   G       C K   EI +M+ +PYASAVGSLMY 
Sbjct: 1078 QKNYIDKVLKRFGMHDCKPGDTPVAKGDKFCLSQCPKENLEIQEMQKIPYASAVGSLMYA 1137

Query: 276  MLCTRPDIYYAMGYMVRYQSNPGQED*MAV--------RTRDHVLQY-RSDELITIGYTD 124
             +CTRPDI Y +G + RY SNPG +   A         RT+D++L Y RSD L  IGY+D
Sbjct: 1138 QVCTRPDIAYIVGVLGRYLSNPGLDHWKAAKRVMRYLQRTKDYMLTYQRSDNLEIIGYSD 1197

Query: 123  LDFQADRDERKSTTGYVFTLGYGAIIWRSVK--CIANSTMEAE 1
             DF   +D RKST+GYVF L  GAI WRS K   +A+STM AE
Sbjct: 1198 SDFAGCQDSRKSTSGYVFLLAGGAISWRSAKQSLVASSTMAAE 1240