BLASTX nr result

ID: Mentha23_contig00046212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00046212
         (528 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...    47   1e-10
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]    67   3e-09
emb|CAN78706.1| hypothetical protein VITISV_028658 [Vitis vinifera]    65   1e-08
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    62   6e-08
emb|CAN77012.1| hypothetical protein VITISV_036882 [Vitis vinifera]    62   1e-07
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]    60   2e-07
emb|CAN76151.1| hypothetical protein VITISV_012673 [Vitis vinifera]    60   3e-07
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...    57   3e-06
emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]    56   5e-06
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]    56   6e-06
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]    56   6e-06
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]    56   6e-06
emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera]    55   8e-06

>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1447

 Score = 47.4 bits (111), Expect(2) = 1e-10
 Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
 Frame = -2

Query: 350 FNLQKLSPASNHLSF---CQSSI-ASTSSQPAVSSAFLSHGQANPLAFATSEDFLSLDV* 183
           FNL+ L  A+  L F   C+  + A  SS P        H +  PL  A      S +  
Sbjct: 409 FNLKDL--ATKKLLFRGPCRGRLYALPSSSP--------HERPRPLKEAFGAIKPSFERW 458

Query: 182 HKILGHCYLDIVKRALNDCNIQ-FNDKISNSLCQACSFAKMHRLPYSLSKSEHNNPLELV 6
           H  LGH    IV++ ++  N+    +    S+C AC   K H+LPYS S S  ++PLEL+
Sbjct: 459 HSRLGHPASPIVEKVISKNNLPCLAESNKQSVCDACQQGKSHQLPYSRSSSMSSHPLELI 518

Query: 5   H 3
           +
Sbjct: 519 Y 519



 Score = 43.9 bits (102), Expect(2) = 1e-10
 Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
 Frame = -1

Query: 528 YPDSGATNHVSNDLANLNIASEYRGPNRLQMGNGYGVDIAHIGYQ--EGPSQGYP*RRIV 355
           Y D+ AT+HV+ +L  L +   Y+G +++   +G G++I+HIG+     P++    R I+
Sbjct: 320 YVDTSATDHVTGELDKLTVRDRYKGQDQVHTASGAGMEISHIGHSTVRTPNRDIHLRNIL 379

Query: 354 HV 349
           +V
Sbjct: 380 YV 381


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/53 (54%), Positives = 38/53 (71%)
 Frame = -1

Query: 528 YPDSGATNHVSNDLANLNIASEYRGPNRLQMGNGYGVDIAHIGYQEGPSQGYP 370
           +PDSGATNHV++DL NLN  +EY G +++ MGNG G+ I+HIG    PS   P
Sbjct: 268 FPDSGATNHVTHDLGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSP 320


>emb|CAN78706.1| hypothetical protein VITISV_028658 [Vitis vinifera]
          Length = 780

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 29/53 (54%), Positives = 37/53 (69%)
 Frame = -1

Query: 528 YPDSGATNHVSNDLANLNIASEYRGPNRLQMGNGYGVDIAHIGYQEGPSQGYP 370
           +PDSGATNHV++DL NLN   EY G +++ MGNG G +I+HIG    PS   P
Sbjct: 351 FPDSGATNHVTHDLGNLNSGVEYNGNSKIHMGNGTGPEISHIGLSIFPSSSSP 403


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/107 (32%), Positives = 56/107 (52%)
 Frame = -2

Query: 323 SNHLSFCQSSIASTSSQPAVSSAFLSHGQANPLAFATSEDFLSLDV*HKILGHCYLDIVK 144
           S+HL+   +   S S    V+S+F S          T+    + D+ HK LGH     +K
Sbjct: 486 SSHLALRPTQSLSKSPS-VVASSFSSK-------VCTTSLSSTFDLWHKRLGHPSAATIK 537

Query: 143 RALNDCNIQFNDKISNSLCQACSFAKMHRLPYSLSKSEHNNPLELVH 3
             L+ CN+   +K+ ++ C +C   K+HR P+SLS + +  PLEL+H
Sbjct: 538 NVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIH 584


>emb|CAN77012.1| hypothetical protein VITISV_036882 [Vitis vinifera]
          Length = 618

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 33/43 (76%)
 Frame = -1

Query: 528 YPDSGATNHVSNDLANLNIASEYRGPNRLQMGNGYGVDIAHIG 400
           +PDSGATNH +ND  NLNI ++Y+G  +  MGNG G+DI HIG
Sbjct: 20  FPDSGATNHFTNDFNNLNIGTKYQGNKKRNMGNGAGLDILHIG 62


>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
          Length = 955

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/53 (50%), Positives = 36/53 (67%)
 Frame = -1

Query: 528 YPDSGATNHVSNDLANLNIASEYRGPNRLQMGNGYGVDIAHIGYQEGPSQGYP 370
           +PDS ATNHV++DL NLN  +EY G +++ MGN  G+ I+HIG    PS   P
Sbjct: 270 FPDSRATNHVTHDLGNLNSGAEYNGNSKIHMGNETGLKISHIGLSVFPSSSSP 322


>emb|CAN76151.1| hypothetical protein VITISV_012673 [Vitis vinifera]
          Length = 979

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
 Frame = -2

Query: 233 NPLAF-ATSE--DFLSLDV*HKILGHCYLDIVKRALNDCNIQFNDKISNSLCQACSFAKM 63
           +PLAF ATS   D  SL + H  LGH ++D+V + L+ C I      +NS+C++C  AK 
Sbjct: 236 HPLAFYATSSISDAGSLRLLHNRLGHLFVDVVSKILSLCKIPLKHDNNNSICESCQLAKS 295

Query: 62  HRLPYSLSKSEHNNPLELVH 3
           HRLP+  S S    P  L++
Sbjct: 296 HRLPFQRSTSRAIKPFGLIY 315


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/65 (44%), Positives = 40/65 (61%)
 Frame = -2

Query: 200 LSLDV*HKILGHCYLDIVKRALNDCNIQFNDKISNSLCQACSFAKMHRLPYSLSKSEHNN 21
           LSLD  H  LGH  +  VK+ +N  ++  +D  S S+C AC  AK H+LP+ +S S   +
Sbjct: 448 LSLDRWHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKSHQLPFPISSSVSKH 507

Query: 20  PLELV 6
           PLELV
Sbjct: 508 PLELV 512


>emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]
          Length = 1282

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 12/122 (9%)
 Frame = -2

Query: 332 SPASNHLSFCQSSIASTSSQPAVSSAFLSHGQANPLAFATSEDFLS---------LDV*H 180
           S AS+HL+  QS    TSS P   +  ++ G          E F S         + +  
Sbjct: 348 SGASHHLT--QSVGNLTSSSPYTGTDKVTIGNVISYKLLEGEVFNSKFCINPLEPISMAI 405

Query: 179 KILGHCYLDIVKRALNDCNIQFN---DKISNSLCQACSFAKMHRLPYSLSKSEHNNPLEL 9
           + LGH   DIV + +  CN+ F    + + +++C +C  AK HRLP  LS S  + PLEL
Sbjct: 406 ERLGHASTDIVTQIMQSCNVSFEKNKNTVCSTVCSSCQLAKSHRLPTHLSLSCASKPLEL 465

Query: 8   VH 3
           VH
Sbjct: 466 VH 467


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = -2

Query: 230 PLAFATSEDFLSLDV*HKILGHCYLDIVKRALNDCNIQFNDKISN-SLCQACSFAKMHRL 54
           P AF T+  F    + H  LGH  + I+ +AL  CN     +I+  + C  C  AK H L
Sbjct: 465 PRAFVTTGSFSDGAIWHSRLGHPAVPILSKALASCNPSVTLQINKIAPCIICPLAKSHSL 524

Query: 53  PYSLSKSEHNNPLELVH 3
           PYSLS S  ++PL L+H
Sbjct: 525 PYSLSSSHASHPLALIH 541


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = -2

Query: 230 PLAFATSEDFLSLDV*HKILGHCYLDIVKRALNDCNIQFNDKISN-SLCQACSFAKMHRL 54
           P AF T+  F    + H  LGH  + I+ +AL  CN     +I+  + C  C  AK H L
Sbjct: 465 PRAFVTTGSFSDGAIWHSRLGHPAVPILSKALASCNPSVTLQINKIAPCIICPLAKSHSL 524

Query: 53  PYSLSKSEHNNPLELVH 3
           PYSLS S  ++PL L+H
Sbjct: 525 PYSLSSSHASHPLALIH 541


>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
          Length = 1272

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = -2

Query: 230 PLAFATSEDFLSLDV*HKILGHCYLDIVKRALNDCNIQFNDKISN-SLCQACSFAKMHRL 54
           P AF T+  F    + H  LGH  + I+ +AL  CN     +I+  + C  C  AK H L
Sbjct: 465 PRAFVTTGSFSDGAIWHSRLGHPAVPILSKALASCNPSVTLQINKIAPCIICPLAKSHSL 524

Query: 53  PYSLSKSEHNNPLELVH 3
           PYSLS S  ++PL L+H
Sbjct: 525 PYSLSSSHASHPLALIH 541


>emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera]
          Length = 1380

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
 Frame = -2

Query: 293 IASTSSQPAVSSAFLSHGQANPLA------------FATSEDFLSLDV*HKILGHCYLDI 150
           +AS S+ PA  S +L  G ++ L               T    +  ++ H  L H   DI
Sbjct: 233 VASASNSPADESWYLDSGASHHLTQNLGNLTSTSPYTGTYRVTIGNELWHNRLSHAGSDI 292

Query: 149 VKRALNDCNIQFNDKISNSLCQACSFAKMHRLPYSLSKSEHNNPLELVH 3
           V + +N CN+  + K  + +C  C  AK HRLP  LS    + PLELV+
Sbjct: 293 VSKVMNTCNVA-SGKYKSIVCSDCQLAKSHRLPTQLSNFRASKPLELVY 340


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