BLASTX nr result
ID: Mentha23_contig00045935
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00045935
(687 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 273 3e-71
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 248 1e-63
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 244 1e-62
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 244 1e-62
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 244 2e-62
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 241 2e-61
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 238 1e-60
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 236 4e-60
emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera] 234 3e-59
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 233 4e-59
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc... 233 6e-59
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera] 232 1e-58
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 231 2e-58
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 231 2e-58
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 231 2e-58
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 231 2e-58
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 230 3e-58
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 228 1e-57
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 226 7e-57
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 225 1e-56
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 273 bits (699), Expect = 3e-71
Identities = 116/225 (51%), Positives = 165/225 (73%)
Frame = +3
Query: 12 VQSKLSFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDD 191
+Q++L+FC AC +GK QFP P+ T PF+L+ +D+W A T S GYKYYI FVD
Sbjct: 471 LQNELNFCTACPLGKAKQFPLPTTINKTQVPFELVFSDVWEPAHTTSCDGYKYYIAFVDA 530
Query: 192 YTRFTWIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHF 371
+T +TWI+P KS+A +V QF++ + +F T +K +Q+DWGGEF PL S L +GI F
Sbjct: 531 FTNYTWIYPRQQKSQATSIVLQFIALVDRKFPTKLKCLQTDWGGEFHPLQSLLQKKGILF 590
Query: 372 QHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQF 551
+H CP++H QNGK ERKH+ I +IGLTLLA++ +P++FWW AF TA YL+NRLP+ VL
Sbjct: 591 RHPCPHVHQQNGKVERKHRSIVEIGLTLLAKSQLPFTFWWHAFSTATYLLNRLPTPVLHC 650
Query: 552 QTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
+TP+ +L+K+ P++ LK FGC CYP+L+PY HKL+++S++C F
Sbjct: 651 KTPYELLFKSSPDFLFLKTFGCACYPYLRPYKNHKLEYQSTQCTF 695
Score = 126 bits (317), Expect = 6e-27
Identities = 72/225 (32%), Positives = 118/225 (52%), Gaps = 3/225 (1%)
Frame = +3
Query: 21 KLSFCDACKIGKMHQFPHPSRP-THTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYT 197
K C+AC++GK + ++ T++P +L+H DL+G + T S G Y VDD++
Sbjct: 1066 KDKICEACQMGKQIKNSFKNKNFISTSRPLELLHMDLFGPSRTPSLGGKSYAYVIVDDFS 1125
Query: 198 RFTWIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFR--PLVSFLHDQGIHF 371
R+TW+ L+ KSEA +F + +Q + S+ I+SD G EF + + GI+
Sbjct: 1126 RYTWVLFLSQKSEAFYEFSKFCNKVQNEKGFSITCIRSDHGREFENFDFEEYCNKHGINH 1185
Query: 372 QHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQF 551
S P QNG ERK++ +Q++ T+L + ++P FW +A T+ Y++NR+ +
Sbjct: 1186 NFSAPRTPQQNGVVERKNRTLQEMARTMLNENNLPKYFWAEAVNTSCYVLNRILLRPILK 1245
Query: 552 QTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
+TP+ + PN K FGC C+ N K KS +F
Sbjct: 1246 KTPYELWKNKKPNISYFKVFGCKCFILNTKDNLGKFDAKSDVGIF 1290
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 248 bits (634), Expect = 1e-63
Identities = 114/218 (52%), Positives = 152/218 (69%)
Frame = +3
Query: 33 CDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYTRFTWI 212
C C +GK+H+ + T+P +LIHTDLWG AST S G++YYIHF+D Y+RFTWI
Sbjct: 539 CSXCCMGKIHKSSFLHSTSSYTKPLELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWI 598
Query: 213 FPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQHSCPYI 392
+ L KSEA +V F S ++ Q +KA+QSDWGGE+R +L GI + SCPY
Sbjct: 599 YMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYT 658
Query: 393 HSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTPFYML 572
H QNG AERKH+HI + G+ LLAQAS+P+ +W +AF+T+VYLINRLP+ VL+ ++P +L
Sbjct: 659 HEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVL 718
Query: 573 YKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
+ P+Y LK FGC CYP L+P+N HKLQF+S C F
Sbjct: 719 FHQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTF 756
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 244 bits (624), Expect = 1e-62
Identities = 111/220 (50%), Positives = 152/220 (69%)
Frame = +3
Query: 27 SFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYTRFT 206
+FC +C +GK+H+FP T T+P +LIH DLWG S GY+YYIHFVD ++RF+
Sbjct: 554 NFCSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFS 613
Query: 207 WIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQHSCP 386
WIF L KSEA K F + ++ QF +K++Q+DWGGEFR S+L + GI + SCP
Sbjct: 614 WIFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCP 673
Query: 387 YIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTPFY 566
+ QNG AERKH+ I + GLTLL AS+P FW ++F+T VYL NRLP+A+L + P
Sbjct: 674 HTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIE 733
Query: 567 MLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
+L+K+ P+Y LK FGC+C+P L+PYN HKLQ++S +C F
Sbjct: 734 VLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTF 773
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 244 bits (624), Expect = 1e-62
Identities = 109/222 (49%), Positives = 151/222 (68%)
Frame = +3
Query: 21 KLSFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYTR 200
K + C +C++ K H+ P H ++P +L++TD+WG AS S G KY+I FVDDY+R
Sbjct: 513 KATVCSSCQLAKSHRLPTHLSSFHASKPLELVYTDIWGPASVTSTSGAKYFILFVDDYSR 572
Query: 201 FTWIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQHS 380
+TW++ L K +A + K F ++ QF +K +Q D GGEFR +SFL + GI + S
Sbjct: 573 YTWLYLLQSKDQALPIFKXFKLQVENQFEAKIKCLQXDNGGEFRSFMSFLQESGILHRFS 632
Query: 381 CPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTP 560
CPY SQNG+ ERKH+H+ + GL LLA A +P FW AFQTA +LINR+PS VL +P
Sbjct: 633 CPYNSSQNGRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRMPSKVLXNASP 692
Query: 561 FYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
++ L+K P+YK L+ FGC CYPF++PYN HKLQ++S KCVF
Sbjct: 693 YFALFKRNPDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVF 734
>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 244 bits (622), Expect = 2e-62
Identities = 113/220 (51%), Positives = 149/220 (67%)
Frame = +3
Query: 27 SFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYTRFT 206
S CDAC+ GK HQ P P + ++ P +LIH+D+WG AS S +YY+ F+DDY++F
Sbjct: 477 SVCDACQQGKSHQLPFPKFFSVSSNPLELIHSDVWGPASD-SVGAKRYYVSFIDDYSKFV 535
Query: 207 WIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQHSCP 386
WI+ L KSE + K+F S ++ QF+ + +Q+DWGGE++ L SF GI Q SCP
Sbjct: 536 WIYFLKFKSEVFEKFKEFQSMVERQFNRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCP 595
Query: 387 YIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTPFY 566
+ H QNG ERKH+HI +IGL+LLA ASMP FW +AF A YLINRLP V+ F TP
Sbjct: 596 HTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFLAATYLINRLPRKVIDFDTPLA 655
Query: 567 MLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
L+ P+YK L+ FGC C+P L+PYN HKLQF+S +CVF
Sbjct: 656 RLFHQQPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVF 695
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 241 bits (615), Expect = 2e-61
Identities = 110/220 (50%), Positives = 148/220 (67%)
Frame = +3
Query: 27 SFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYTRFT 206
S CDAC+ K HQ P P + + P +LIH+D+WG AS S KYY+ F+DDY++F
Sbjct: 476 SVCDACQQAKCHQLPFPRSTSVSNNPLELIHSDVWGPASE-SVGAKKYYVSFIDDYSKFV 534
Query: 207 WIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQHSCP 386
WI+ L KSE + +F ++ QF + ++Q+DWGGE+ L +F ++ GI SCP
Sbjct: 535 WIYFLKHKSEVFQKFHEFQKLVERQFDRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCP 594
Query: 387 YIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTPFY 566
+ H QNG ERKH+HI ++GL+LLA ASMP FW +AF A YLINRLPS V++F TP
Sbjct: 595 HTHQQNGAVERKHRHIVEVGLSLLAHASMPLKFWDEAFLAATYLINRLPSKVIKFDTPLE 654
Query: 567 MLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
L+K P+YK L+ FGC C+P L+PYN HKLQF+S +CVF
Sbjct: 655 RLFKQTPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVF 694
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 238 bits (607), Expect = 1e-60
Identities = 109/223 (48%), Positives = 151/223 (67%)
Frame = +3
Query: 18 SKLSFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYT 197
+K S CDAC+ GK HQ P+ + ++ P +LI++D+WG A T S G +YY+ F+ DY+
Sbjct: 486 NKQSVCDACQQGKSHQLPYSRSSSMSSHPLELIYSDVWGPALT-SVGGKQYYVSFIGDYS 544
Query: 198 RFTWIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQH 377
+FTW++ + KSE + +F + ++ F+ + A+QSDWGGE+ L SF GI
Sbjct: 545 KFTWLYLIKHKSEVIQKFHEFQALVERLFNRKIIAMQSDWGGEYEKLHSFFTKIGITHHV 604
Query: 378 SCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQT 557
SCP+ H QNG AERKH+HI ++GLTLLA +SMP FW +AFQ AVYLINR P+ +LQF T
Sbjct: 605 SCPHTHQQNGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQAAVYLINRTPTKLLQFLT 664
Query: 558 PFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
P L+ P+Y L+ FGC C+P L+PYN HKLQF+S +C F
Sbjct: 665 PLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTF 707
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 236 bits (603), Expect = 4e-60
Identities = 102/218 (46%), Positives = 147/218 (67%)
Frame = +3
Query: 33 CDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYTRFTWI 212
C C++ K H+ P H ++P +L++TD+WG AS S G +Y+I FVDDY+R+TW
Sbjct: 522 CSDCQLAKSHRLPTQLSNFHASKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRYTWF 581
Query: 213 FPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQHSCPYI 392
+ L K +A + K F ++ QF T +K +QSD GGEFR SFL GI + SCPY
Sbjct: 582 YSLQTKDQALPIFKXFKLQMENQFDTKIKCLQSDNGGEFRSFTSFLQAVGIAHRFSCPYN 641
Query: 393 HSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTPFYML 572
QNG+ ERKH+H+ + GL LL+ AS+P +W AFQT +LINR+PS VL++ +P++ L
Sbjct: 642 SXQNGRVERKHRHVVETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTL 701
Query: 573 YKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
++ P+YK + FGC CYPF++PYN HKLQ++S +C+F
Sbjct: 702 FRRHPDYKSFRVFGCLCYPFIRPYNTHKLQYRSVQCLF 739
>emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]
Length = 1319
Score = 234 bits (596), Expect = 3e-59
Identities = 103/218 (47%), Positives = 148/218 (67%)
Frame = +3
Query: 33 CDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYTRFTWI 212
C +C++ K H+ P + ++P +L+HTDLWG AS S G +Y+I F++DY+++TW
Sbjct: 460 CSSCQLAKSHRLPTHLSLSCASKPLELVHTDLWGPASVKSTSGARYFILFLNDYSQYTWF 519
Query: 213 FPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQHSCPYI 392
+PL K +A K+F ++ QF +K +QSD GGEFR +FL GI + SCPY
Sbjct: 520 YPLQTKDQALPAFKKFKLQVENQFDAKIKCLQSDNGGEFRSFKTFLQQTGIFHRFSCPYN 579
Query: 393 HSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTPFYML 572
+QNG+ ERKH+H+ + GL LLA AS+P FW AFQTA +LINR+PS VLQ +P++ L
Sbjct: 580 SAQNGRVERKHRHVVETGLALLAHASLPMEFWQYAFQTATFLINRMPSKVLQNNSPYFTL 639
Query: 573 YKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
++ PNYK L+ FGC CYPF++P N HKLQ++S + +F
Sbjct: 640 FQKVPNYKSLRVFGCLCYPFIRPCNSHKLQYRSVQSLF 677
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 233 bits (594), Expect = 4e-59
Identities = 102/218 (46%), Positives = 146/218 (66%)
Frame = +3
Query: 33 CDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYTRFTWI 212
C+ C++ K H+ P + +QPF L+H+DLWG A G +Y++ FVDD+TRF+W+
Sbjct: 467 CEPCQMAKSHRLPFTLSESRASQPFALVHSDLWGPAPVVGTNGARYFVLFVDDHTRFSWL 526
Query: 213 FPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQHSCPYI 392
+ L K +A QF I+ QF T V+ +Q++WGGEF+ + L GI + SCP
Sbjct: 527 YLLAFKDQAISGFLQFKVMIETQFDTKVRMLQTNWGGEFQAFTNTLCKFGILHRVSCPST 586
Query: 393 HSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTPFYML 572
QNG+ ERKH+H+ ++GL+LLA AS+P +W AFQ+A+YLINRLPS+VL F +P+ L
Sbjct: 587 SQQNGRVERKHRHVVEVGLSLLAHASIPLKYWPFAFQSALYLINRLPSSVLNFSSPYKTL 646
Query: 573 YKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
Y PNY L+ +GCTCYPFL+P+N+HK ++S KC F
Sbjct: 647 YHCLPNYSFLRVYGCTCYPFLRPFNRHKFAYRSVKCTF 684
>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1177
Score = 233 bits (593), Expect = 6e-59
Identities = 108/212 (50%), Positives = 143/212 (67%)
Frame = +3
Query: 51 GKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYTRFTWIFPLTLK 230
GK HQ P P + ++ P +LIH+D+WG AS S +YY+ F+DDY++F WI+ L K
Sbjct: 374 GKSHQLPFPKFFSVSSNPLELIHSDVWGPASD-SVGAKRYYVSFIDDYSKFVWIYFLKFK 432
Query: 231 SEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQHSCPYIHSQNGK 410
SE + K+F S ++ QF+ + +Q+DWGGE++ L SF GI Q SCP+ H QNG
Sbjct: 433 SEVFEKFKEFQSMVERQFNRKILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGA 492
Query: 411 AERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPN 590
ERKH+HI +IGL+LLA ASMP FW +AF A YLINRLP V+ F TP L+ P+
Sbjct: 493 VERKHRHIVEIGLSLLAHASMPLKFWDEAFLAATYLINRLPRKVIDFDTPLARLFHQQPD 552
Query: 591 YKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
YK L+ FGC C+P L+PYN HKLQF+S +CVF
Sbjct: 553 YKSLRTFGCACWPNLRPYNTHKLQFRSKQCVF 584
>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
Length = 1198
Score = 232 bits (591), Expect = 1e-58
Identities = 102/218 (46%), Positives = 147/218 (67%)
Frame = +3
Query: 33 CDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYTRFTWI 212
C +C++ K H+ P + ++P +L+HTDLWG AS S G +Y+I F+DDY+R+TW
Sbjct: 426 CSSCQLAKSHRLPTHLSLSCASKPLELVHTDLWGPASVKSTSGARYFILFLDDYSRYTWF 485
Query: 213 FPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQHSCPYI 392
+PL K +A K+F ++ QF +K +QSD GGEFR +FL GI + SCPY
Sbjct: 486 YPLQTKDQALPAFKKFKLQVENQFDAKIKCLQSDNGGEFRSFKTFLQQTGIFHRFSCPYN 545
Query: 393 HSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTPFYML 572
+QN + ERKH+H+ + GL LLA AS+P FW AFQTA +LINR+PS VLQ +P++ L
Sbjct: 546 SAQNERVERKHRHVVETGLALLAHASLPMEFWQYAFQTATFLINRMPSKVLQNNSPYFTL 605
Query: 573 YKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
++ P+Y+ L+ F C CYPF++PYN HKLQ++S + +F
Sbjct: 606 FQKVPDYESLRVFSCLCYPFIRPYNNHKLQYRSVQSLF 643
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 231 bits (589), Expect = 2e-58
Identities = 107/225 (47%), Positives = 149/225 (66%)
Frame = +3
Query: 12 VQSKLSFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDD 191
V +K S CDAC+ GK HQ P+P + ++QP +LI +++WG A S G K+Y+ F+DD
Sbjct: 446 VANKDSICDACQKGKSHQLPYPKSSSVSSQPLELIFSNVWGPAPI-SVGGKKFYVSFIDD 504
Query: 192 YTRFTWIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHF 371
Y++FTW++ L KSE + ++F + ++ F + A+Q+DWGGE++ L +F GI
Sbjct: 505 YSKFTWVYLLKHKSEVFQKFQEFQTLVERFFGHKILAVQTDWGGEYQKLNTFFAKIGISH 564
Query: 372 QHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQF 551
SCPY H QNG AERKH+H+ ++ LTLLA ASMP FW +A A YLINR PS V+ F
Sbjct: 565 HVSCPYAHQQNGSAERKHRHLIEVALTLLAHASMPIKFWDEAVLAAAYLINRTPSKVINF 624
Query: 552 QTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
P L+K PNY L+ FGC +P L+PYN+HKL F+S +CVF
Sbjct: 625 ACPLEQLFKEKPNYTALRIFGCAVWPNLRPYNKHKLAFRSKRCVF 669
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 231 bits (588), Expect = 2e-58
Identities = 109/225 (48%), Positives = 150/225 (66%), Gaps = 2/225 (0%)
Frame = +3
Query: 18 SKLSFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYT 197
+KL FC AC++GK Q P P ++ P LIH+D+W + S G YY+ F+DDY+
Sbjct: 488 TKLEFCSACQLGKAKQLPFPESSRQSSVPLALIHSDVW-VSPVQSTGGCSYYVLFIDDYS 546
Query: 198 RFTWIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEF--RPLVSFLHDQGIHF 371
R++W++PL KS+ +F + + FSTS+K IQ+D GGEF FL QGI
Sbjct: 547 RYSWLYPLHRKSDVFATFVKFKTIAEKLFSTSIKQIQTDNGGEFTSNQFKQFLTAQGIFH 606
Query: 372 QHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQF 551
+ +CP+ QNG ERKH+HIQ++GLTLLAQ+S+ +W DAF T+V+LINRLP+ VL
Sbjct: 607 RLTCPHTSQQNGIVERKHRHIQEMGLTLLAQSSLSPQYWVDAFLTSVFLINRLPTKVLDN 666
Query: 552 QTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
TP+++L+KT P Y L+ FGC CYP L+PYN HKL F+S KC+F
Sbjct: 667 LTPYFLLHKTEPTYMDLRVFGCACYPLLRPYNDHKLTFRSKKCIF 711
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 231 bits (588), Expect = 2e-58
Identities = 106/222 (47%), Positives = 150/222 (67%)
Frame = +3
Query: 21 KLSFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYTR 200
K + C AC+ K H+ P + + P L+H DLWG S S G +Y+I FVDD++R
Sbjct: 549 KNNVCCACQFAKSHKLPFNVXVSRASHPLALLHADLWGPXSIPSTTGARYFILFVDDFSR 608
Query: 201 FTWIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQHS 380
F+WI+PL K +A V +F S ++ QF++ ++ ++SD GGEF+ S+L GI Q S
Sbjct: 609 FSWIYPLHSKDQALSVFIKFKSLVENQFNSRIQCLRSDNGGEFKAFSSYLATHGIKSQFS 668
Query: 381 CPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTP 560
CPY QNG+AERK +HI + GL LLA AS+P+ FW AF TA++LINRLP+ VL +Q+P
Sbjct: 669 CPYTPEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTAIFLINRLPTKVLNYQSP 728
Query: 561 FYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
F +L+ PNY K FGC CYP+++PYN++KL ++SS+CVF
Sbjct: 729 FQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVF 770
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 231 bits (588), Expect = 2e-58
Identities = 104/193 (53%), Positives = 139/193 (72%)
Frame = +3
Query: 108 DLIHTDLWGAASTCSFQGYKYYIHFVDDYTRFTWIFPLTLKSEAPKVVKQFLSFIQCQFS 287
+L++TD+WG AS S G KY+I FVDDY+R+TW++ L K +A + KQF ++ QF
Sbjct: 492 ELVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKQFKLQVENQFD 551
Query: 288 TSVKAIQSDWGGEFRPLVSFLHDQGIHFQHSCPYIHSQNGKAERKHQHIQDIGLTLLAQA 467
+K +QSD GGEFR +SFL + GI + SCPY SQNG+ ERKH+H+ + GL LLA A
Sbjct: 552 AKIKCLQSDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHA 611
Query: 468 SMPYSFWWDAFQTAVYLINRLPSAVLQFQTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYN 647
+P FW AFQTA +LINR+PS VLQ +P++ L+K P+YK L+ FGC CYPF++PYN
Sbjct: 612 GLPLKFWSYAFQTATFLINRMPSKVLQNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYN 671
Query: 648 QHKLQFKSSKCVF 686
HKLQ++S KCVF
Sbjct: 672 NHKLQYRSLKCVF 684
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 230 bits (587), Expect = 3e-58
Identities = 102/220 (46%), Positives = 145/220 (65%)
Frame = +3
Query: 27 SFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYTRFT 206
S CDAC+ K HQ P+ + +T+P +L+++D+WG A + S G K+Y+ F+DD+++FT
Sbjct: 452 SVCDACQKAKSHQLPYSRSTSVSTRPLELVYSDVWGTAPS-SVGGNKFYVSFIDDFSKFT 510
Query: 207 WIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQHSCP 386
W++ L KS+ + +F + ++ + +Q DWGGE++ L SF GI SCP
Sbjct: 511 WVYSLKHKSDVFQKFHEFQALVERLLGHKIITMQKDWGGEYQKLHSFFDKIGISHHVSCP 570
Query: 387 YIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQTPFY 566
Y H QN AERKH+HI ++GL LLA ASMP W + F TA YLINR P+ V++F+TP
Sbjct: 571 YAHQQNSSAERKHRHIVEVGLALLAHASMPLKLWDEVFYTAAYLINRTPNKVIKFETPLE 630
Query: 567 MLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
L+K PNY L+ FGC C+P L+PYN HKLQF+S +CVF
Sbjct: 631 RLFKQLPNYSLLRVFGCACWPNLRPYNNHKLQFRSKQCVF 670
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 228 bits (581), Expect = 1e-57
Identities = 109/223 (48%), Positives = 143/223 (64%)
Frame = +3
Query: 18 SKLSFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYT 197
S S CDAC K HQ P+ + ++ P LI +D++G A SF YKYY+ F+DDY+
Sbjct: 486 STTSVCDACLQAKAHQLPYTISMSQSSAPLMLIFSDVFGPAID-SFGRYKYYVSFIDDYS 544
Query: 198 RFTWIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQH 377
+FTWI+ L KS+ K +F ++ F + A QSDWGGE+ L + GIH Q
Sbjct: 545 KFTWIYLLRHKSDVYKSFCEFQHLVERMFGRKIIAFQSDWGGEYEKLNAHFKTIGIHHQV 604
Query: 378 SCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQT 557
SCP+ H QNG AERKH+HI ++GL LLAQ+SMP +W AF AVYLINR PS + T
Sbjct: 605 SCPHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAAVYLINRTPSKTIAHDT 664
Query: 558 PFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
P + L P+Y L+ FGC C+P L+PYNQHKLQF+S++CVF
Sbjct: 665 PLHKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVF 707
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 226 bits (575), Expect = 7e-57
Identities = 106/225 (47%), Positives = 145/225 (64%)
Frame = +3
Query: 12 VQSKLSFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDD 191
V ++S CDAC+ K HQ P + + P +L+ +D+WG A S KYY+ F+DD
Sbjct: 482 VSEQVSVCDACQKAKSHQLSFPKSTSESKYPLELVFSDVWGPAPQ-SVGNNKYYVSFIDD 540
Query: 192 YTRFTWIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHF 371
Y++FTWI+ L KSE +F S ++ F+ + A+Q+DWGGE++ L SF + GI
Sbjct: 541 YSKFTWIYLLKYKSEVFDKFHEFQSLVERLFNRKIVAMQTDWGGEYQKLHSFFNKVGITH 600
Query: 372 QHSCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQF 551
SCP+ H QNG AERKH+HI ++GL LLA +SMP FW +AF +AVYLINR PS VL
Sbjct: 601 HVSCPHTHQQNGSAERKHRHIVEVGLALLAYSSMPLKFWGEAFLSAVYLINRTPSRVLHD 660
Query: 552 QTPFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
+P L P+Y L+ FGC C+P L+PYN+HKLQF+S+ C F
Sbjct: 661 VSPLERLLGHKPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTF 705
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 225 bits (573), Expect = 1e-56
Identities = 105/223 (47%), Positives = 146/223 (65%)
Frame = +3
Query: 18 SKLSFCDACKIGKMHQFPHPSRPTHTTQPFDLIHTDLWGAASTCSFQGYKYYIHFVDDYT 197
S S C+AC+ K HQ P P + + P +L+ +D+WG A S KYY+ F+DD++
Sbjct: 480 SSESVCNACQQAKSHQLPFPISSSVSKHPLELVFSDVWGPAPE-SVGRKKYYVSFIDDFS 538
Query: 198 RFTWIFPLTLKSEAPKVVKQFLSFIQCQFSTSVKAIQSDWGGEFRPLVSFLHDQGIHFQH 377
+FTWI+ + KS+ ++F ++ QF + A+Q+DWGGE++ L SF GI
Sbjct: 539 KFTWIYLIQHKSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHV 598
Query: 378 SCPYIHSQNGKAERKHQHIQDIGLTLLAQASMPYSFWWDAFQTAVYLINRLPSAVLQFQT 557
SCP+ H QNG AERKH+HI +IGL+LL+ ASMP FW +AFQ A YLINR+PS V+ +
Sbjct: 599 SCPHTHQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNIS 658
Query: 558 PFYMLYKTFPNYKQLKPFGCTCYPFLKPYNQHKLQFKSSKCVF 686
P L+K P+Y L+ FGC C+P L+PYN HKLQF+S +CVF
Sbjct: 659 PLEKLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVF 701