BLASTX nr result
ID: Mentha23_contig00044674
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00044674
(339 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus... 117 2e-24
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [... 96 7e-18
gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlise... 92 6e-17
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit... 91 2e-16
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 91 2e-16
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 89 8e-16
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr... 86 5e-15
ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Caps... 86 5e-15
ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prun... 86 5e-15
ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prun... 86 5e-15
ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutr... 85 1e-14
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 85 1e-14
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis] 84 2e-14
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian... 83 5e-14
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu... 82 6e-14
ref|XP_002883182.1| pseudouridine synthase family protein [Arabi... 81 2e-13
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 80 3e-13
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 78 1e-12
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [... 76 6e-12
ref|XP_003576723.1| PREDICTED: RNA pseudourine synthase 4, mitoc... 74 2e-11
>gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Mimulus guttatus]
Length = 457
Score = 117 bits (292), Expect = 2e-24
Identities = 66/116 (56%), Positives = 77/116 (66%), Gaps = 6/116 (5%)
Frame = +3
Query: 6 LLRRWQPNAAAPGCGITFNKAIYVRQCCYSAAAATNSENSDKEKNI-QWLILPPFTPTAD 182
+ R +P+AA G KAI Y+ AA +EN +KEKN QWL LPPF P AD
Sbjct: 1 MFRHLRPSAAVSGVRGMSTKAINEHTRYYATAAT--AENCEKEKNYDQWLTLPPFNPNAD 58
Query: 183 GCSIGKKLYGRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQV-----RKECSS 335
GCSIGK+L G+P + TTALKWILKCCPH+PR LVQKLFRLRQV RKE S+
Sbjct: 59 GCSIGKRLSGQPADAK-TTALKWILKCCPHIPRCLVQKLFRLRQVHFLLIRKESSN 113
>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
synthase, putative [Theobroma cacao]
Length = 477
Score = 95.5 bits (236), Expect = 7e-18
Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 8/115 (6%)
Frame = +3
Query: 6 LLRRWQPNAAAPGCGITFNKAIYVRQCCYSAAAATNSE------NSDKEKNIQWLILPPF 167
LLR +P A G G+ + A + + YS ++E NS+K+K +W LPPF
Sbjct: 11 LLRSSRPPATHGGNGLIVS-AFHQLRYHYSTTNELSAEHLKDDGNSEKKKKNKWFTLPPF 69
Query: 168 TPTADGCSIGKKLYGRPEETSA--TTALKWILKCCPHLPRSLVQKLFRLRQVRKE 326
T T + +G KL G+P +A TTA+KW+++CCP LPRSLVQKLFRLRQVR+E
Sbjct: 70 TKTVNASVLGAKLSGKPHSKAANETTAVKWVMRCCPELPRSLVQKLFRLRQVRRE 124
>gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlisea aurea]
Length = 165
Score = 92.4 bits (228), Expect = 6e-17
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +3
Query: 147 WLILPPFTPTADGCSIGKKLYGRPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 326
WL LP F+ TAD CS GK+++GR T+ TT LKWIL CCP LPRSLVQKLFRLR+VRK+
Sbjct: 1 WLTLPAFSETADACSTGKRIFGRHPVTNMTT-LKWILNCCPQLPRSLVQKLFRLRRVRKK 59
Query: 327 CS 332
CS
Sbjct: 60 CS 61
>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
[Solanum tuberosum]
Length = 467
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Frame = +3
Query: 54 TFNKAIYVRQCCYSAAA-ATNSENSDKEKNIQWLILPPFTPTADGCSIGKKLYG-----R 215
T A Y QC Y+ A N ++ + +WL LPPFT T +G ++G++L G +
Sbjct: 26 TLYSAFYRFQCHYATTVTAAQVCNRNENEKAKWLTLPPFTATVNGAALGRELAGVKMDVK 85
Query: 216 PEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKECSS 335
T+ TALKW+ +CCP LP+SLVQKLFRLRQVR++ S+
Sbjct: 86 ENSTNTMTALKWVQRCCPELPKSLVQKLFRLRQVRRDSSN 125
>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 476
Score = 90.5 bits (223), Expect = 2e-16
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 9/90 (10%)
Frame = +3
Query: 90 YSAAAATNSENSDKEKN-IQWLILPPFTPTADGCSIGKKL--------YGRPEETSATTA 242
+ + + T + + DK+K +W LPPFT T +G ++G++L Y +P +ATTA
Sbjct: 32 FRSYSTTQTVHEDKQKRGNKWFTLPPFTDTVNGAALGRELSRSVGRDVYAKPSAAAATTA 91
Query: 243 LKWILKCCPHLPRSLVQKLFRLRQVRKECS 332
LKW+ +CCP +PR+LVQKLFRLRQVR+E S
Sbjct: 92 LKWVTRCCPEIPRNLVQKLFRLRQVRREAS 121
>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
lycopersicum]
Length = 467
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 7/101 (6%)
Frame = +3
Query: 54 TFNKAIYVRQCCYSAAAATNSE--NSDKEKNIQWLILPPFTPTADGCSIGKKLYG----- 212
T A Y QC Y A T+++ N ++ + +WL LPPFT +G ++G++L G
Sbjct: 26 TLYSAFYRLQCHY-ATTVTDAQVCNRNENEKAKWLTLPPFTAAVNGAALGRELAGVKMDV 84
Query: 213 RPEETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKECSS 335
T+ TALKW+ +CCP LP+SLVQKLFRLRQVR++ S+
Sbjct: 85 NENSTNTMTALKWVQRCCPELPKSLVQKLFRLRQVRRDSSN 125
>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
gi|557524859|gb|ESR36165.1| hypothetical protein
CICLE_v10028283mg [Citrus clementina]
Length = 494
Score = 85.9 bits (211), Expect = 5e-15
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 17/128 (13%)
Frame = +3
Query: 3 LLLRRWQPNAAAPGCG----ITFNKAIYVRQCCYSAAAAT-----------NSENSDKEK 137
L L R +P +A G ++ + + + Q CY+ T ++ N D E+
Sbjct: 18 LPLLRSRPFSALHGVARQAILSPSSSFHHHQSCYATKTLTRNNKTHINNCDDNNNGDDER 77
Query: 138 NIQWLILPPFTPTADGCSIGKKLYGRPEET--SATTALKWILKCCPHLPRSLVQKLFRLR 311
+W LPPFT T DG ++G++L P ++ S TTALKW+L+CCP LPR+ VQKLFRL
Sbjct: 78 RGKWFTLPPFTSTIDGSALGRQL-ACPSKSPISETTALKWVLQCCPGLPRNFVQKLFRLS 136
Query: 312 QVRKECSS 335
QVR+E S
Sbjct: 137 QVRRESPS 144
>ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Capsella rubella]
gi|482566291|gb|EOA30480.1| hypothetical protein
CARUB_v10013603mg [Capsella rubella]
Length = 476
Score = 85.9 bits (211), Expect = 5e-15
Identities = 47/96 (48%), Positives = 61/96 (63%), Gaps = 7/96 (7%)
Frame = +3
Query: 66 AIYVRQC-CYSAAAATNSENSDKEKNIQWLILPPFTPTADGCSIGKKLYGRPE------E 224
A +QC YS A N+ +WL LPPF+PT DG ++GK+L + +
Sbjct: 34 AAAAQQCRSYSPAQTDNARG-------KWLTLPPFSPTVDGTAVGKELASEGDSITGSTD 86
Query: 225 TSATTALKWILKCCPHLPRSLVQKLFRLRQVRKECS 332
+S TTAL+WIL+C P LPR+LVQKLFRLRQVR+E S
Sbjct: 87 SSTTTALRWILRCRPDLPRTLVQKLFRLRQVRREMS 122
>ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
gi|462395210|gb|EMJ01009.1| hypothetical protein
PRUPE_ppa004969mg [Prunus persica]
Length = 483
Score = 85.9 bits (211), Expect = 5e-15
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Frame = +3
Query: 6 LLRRWQPNAAAPGCGITFNKAIYVRQCCYSAAAATNSENSDKEKNIQ-WLILPPFTPTAD 182
LL R P++ A C F+ + + A T + + D+EK + W LPPFT T +
Sbjct: 10 LLLRPPPSSTARLCISAFHN--------WRSYATTETFHEDREKRGEKWFTLPPFTATIN 61
Query: 183 GCSIGKKL-----YGRPEET---------SATTALKWILKCCPHLPRSLVQKLFRLRQVR 320
G ++GK+L YGR T + TTALKW+ +CCP LPRSLVQKLFRLRQVR
Sbjct: 62 GSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELPRSLVQKLFRLRQVR 121
Query: 321 KE 326
+E
Sbjct: 122 RE 123
>ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
gi|462395209|gb|EMJ01008.1| hypothetical protein
PRUPE_ppa004969mg [Prunus persica]
Length = 481
Score = 85.9 bits (211), Expect = 5e-15
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Frame = +3
Query: 6 LLRRWQPNAAAPGCGITFNKAIYVRQCCYSAAAATNSENSDKEKNIQ-WLILPPFTPTAD 182
LL R P++ A C F+ + + A T + + D+EK + W LPPFT T +
Sbjct: 10 LLLRPPPSSTARLCISAFHN--------WRSYATTETFHEDREKRGEKWFTLPPFTATIN 61
Query: 183 GCSIGKKL-----YGRPEET---------SATTALKWILKCCPHLPRSLVQKLFRLRQVR 320
G ++GK+L YGR T + TTALKW+ +CCP LPRSLVQKLFRLRQVR
Sbjct: 62 GSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELPRSLVQKLFRLRQVR 121
Query: 321 KE 326
+E
Sbjct: 122 RE 123
>ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutrema salsugineum]
gi|557107647|gb|ESQ47954.1| hypothetical protein
EUTSA_v10020633mg [Eutrema salsugineum]
Length = 477
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 5/78 (6%)
Frame = +3
Query: 114 SENSDKEKNIQWLILPPFTPTADGCSIGKKLYGRPEETSA-----TTALKWILKCCPHLP 278
+++ D + +WL LPPF+PT D ++GK+L+ + A TTAL+WIL+C P LP
Sbjct: 47 ADDDDDDPRGKWLTLPPFSPTIDAAAVGKELFSDGDSVKASSDGSTTALRWILRCRPDLP 106
Query: 279 RSLVQKLFRLRQVRKECS 332
R+LVQKLFRLRQVR+E S
Sbjct: 107 RTLVQKLFRLRQVRREMS 124
>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
product [Vitis vinifera]
Length = 476
Score = 84.7 bits (208), Expect = 1e-14
Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 8/95 (8%)
Frame = +3
Query: 66 AIYVRQCCYSAAAATNSENSDKEKNIQWLILPPFTPTADGCSIGKKLYGRPEETS----- 230
A+ ++ C++ + SE + K K +W LP FTP D S+GK L G + +
Sbjct: 30 ALDQQRSCFATSNDAVSE-AHKSKKGKWFTLPAFTPVVDASSLGKVLSGHRTDLNTGNTT 88
Query: 231 ---ATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 326
+TTALKW+++CCP LPRSLVQKLFRLRQVR+E
Sbjct: 89 AGASTTALKWVVRCCPQLPRSLVQKLFRLRQVRRE 123
>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
Length = 470
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 9/77 (11%)
Frame = +3
Query: 123 SDKEKNIQWLILPPFTPTADGCSIGKKLYGRPEE---------TSATTALKWILKCCPHL 275
S ++ +W LPP T T DG +GK + G ++ ++ATTALKW+++CCP L
Sbjct: 41 SSEKNGTKWFTLPPHTATVDGAVLGKAIAGAKDDDVKVLQASKSAATTALKWVVRCCPEL 100
Query: 276 PRSLVQKLFRLRQVRKE 326
PRSLVQKLFRLRQVR+E
Sbjct: 101 PRSLVQKLFRLRQVRRE 117
>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
pseudouridine synthase 4, mitochondrial; AltName:
Full=RNA pseudouridylate synthase 4; AltName:
Full=RNA-uridine isomerase 4; Flags: Precursor
gi|11994467|dbj|BAB02469.1| unnamed protein product
[Arabidopsis thaliana] gi|110737723|dbj|BAF00800.1|
hypothetical protein [Arabidopsis thaliana]
gi|134031916|gb|ABO45695.1| At3g19440 [Arabidopsis
thaliana] gi|332642719|gb|AEE76240.1| RNA pseudourine
synthase 4 [Arabidopsis thaliana]
Length = 477
Score = 82.8 bits (203), Expect = 5e-14
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 6/112 (5%)
Frame = +3
Query: 15 RWQPNAAAPGCGITFNKAIYVRQCCYSAAAATNSENSDKEKNIQWLILPPFTPTADGCSI 194
R Q +++P N + + + + ++ +D + +WL LPPF+PT DG ++
Sbjct: 12 RRQLQSSSPTISTFKNPTKALSAAAHQSTRSYSTTQTDDSRG-KWLTLPPFSPTIDGTAV 70
Query: 195 GKKLYGRPE------ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKECS 332
GK L + + S TTAL+WIL+C P LPR+LVQKLFRLRQVR+E S
Sbjct: 71 GKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLRQVRREMS 122
>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
gi|550331407|gb|EEE87831.2| hypothetical protein
POPTR_0009s09860g [Populus trichocarpa]
Length = 471
Score = 82.4 bits (202), Expect = 6e-14
Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Frame = +3
Query: 108 TNSENS-DKEKNIQWLILPPFTPTADGCSIGKKLYGR--PEETSATTALKWILKCCPHLP 278
T S+N + +K +W LPP+T T +G +G L R + S TTALKW+L+CCP LP
Sbjct: 44 TKSQNHYENDKRGKWFTLPPYTSTINGSVLGIALSARIPAKSASETTALKWVLRCCPELP 103
Query: 279 RSLVQKLFRLRQVRKE 326
R+LVQKLFRLRQVR+E
Sbjct: 104 RNLVQKLFRLRQVRRE 119
>ref|XP_002883182.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
lyrata] gi|297329022|gb|EFH59441.1| pseudouridine
synthase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Frame = +3
Query: 108 TNSENSDKEKNIQWLILPPFTPTADGCSIGKKLYGRPE------ETSATTALKWILKCCP 269
+ ++ D N WL LPPF+PT DG ++GK L + + S TTAL+WIL+C P
Sbjct: 44 STAQTDDSRGN--WLTLPPFSPTIDGTAVGKDLLSDGDSVKASTDNSKTTALRWILRCRP 101
Query: 270 HLPRSLVQKLFRLRQVRKECS 332
LPR+LVQKLFRLRQVR++ S
Sbjct: 102 DLPRTLVQKLFRLRQVRRQMS 122
>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
sativus]
Length = 471
Score = 80.1 bits (196), Expect = 3e-13
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 8/117 (6%)
Frame = +3
Query: 6 LLRRWQPNAAAPGCGITFNKAIYVRQCCYSAAAATN--SENSDKEKNIQWLILPPFTPTA 179
++ R P+ P I + +V + + + A+ S+ +++ + +W LPP+T T
Sbjct: 11 VILRTSPSCTDPSGEILYFSIFHVLKSTLALSNASEPVSQQKNEKGSNRWFTLPPYTATV 70
Query: 180 DGCSIGKKLY---GRPE---ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKECS 332
+G +G ++ G+ E T+A TALKW+++CCP LPRSLVQKLFRLR+VR+ S
Sbjct: 71 NGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFRLRKVRRGSS 127
>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
sativus]
Length = 466
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 8/115 (6%)
Frame = +3
Query: 6 LLRRWQPNAAAPGCGITFNKAIYVRQCCYSAAAATN--SENSDKEKNIQWLILPPFTPTA 179
++ R P+ P I + +V + + + A+ S+ +++ + +W LPP+T T
Sbjct: 11 VILRTSPSCTDPSGEILYFSIFHVLKSTLALSNASEPVSQQKNEKGSNRWFTLPPYTATV 70
Query: 180 DGCSIGKKLY---GRPE---ETSATTALKWILKCCPHLPRSLVQKLFRLRQVRKE 326
+G +G ++ G+ E T+A TALKW+++CCP LPRSLVQKLFRLR+V ++
Sbjct: 71 NGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFRLRKVPRQ 125
>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 536
Score = 75.9 bits (185), Expect = 6e-12
Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = +3
Query: 93 SAAAATNSENSDKEKNIQWLILPPFTPTADGCSIGKKLYGRP--EETSATTALKWILKCC 266
S+ S+N+ K ++ LPP+T T G ++GK L + ++ TTALKW+L+CC
Sbjct: 111 SSTKDQTSKNNTKNTG-KFFTLPPYTSTISGSALGKALSATATAKASTETTALKWVLRCC 169
Query: 267 PHLPRSLVQKLFRLRQVRKE 326
P LPR+LVQKLFRLRQV++E
Sbjct: 170 PELPRNLVQKLFRLRQVKRE 189
>ref|XP_003576723.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like
[Brachypodium distachyon]
Length = 465
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +3
Query: 99 AAATNSENSDKEKNIQWLILPPFTP---TADGCSIGKKLYGRPEETSATTALKWILKCCP 269
A T S+ KN +W LPPF P TA +I + G EETS++TA++W+ +CCP
Sbjct: 37 AGCTGSKEDRGNKN-RWRELPPFAPLDITAAARAILRGKGGEAEETSSSTAIRWVRRCCP 95
Query: 270 HLPRSLVQKLFRLRQVRKECSSA 338
LP SLVQKLFRLR+V+K +A
Sbjct: 96 DLPASLVQKLFRLRKVKKNALTA 118