BLASTX nr result

ID: Mentha23_contig00043865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00043865
         (519 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   199   3e-49
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   190   2e-46
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   187   1e-45
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   182   5e-44
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   178   6e-43
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   171   1e-40
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   152   4e-35
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...   151   8e-35
gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like p...   149   3e-34
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...   143   2e-32
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   142   5e-32
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...   139   3e-31
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660...   135   6e-30
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A...   134   1e-29
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A...   134   1e-29
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               134   1e-29
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   133   2e-29
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       131   8e-29
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   129   4e-28
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...   129   5e-28

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  199 bits (507), Expect = 3e-49
 Identities = 89/168 (52%), Positives = 123/168 (73%)
 Frame = +2

Query: 2    GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
            G+LPFRYLGVPL+ KKLT   C+PLV  I  R   W +KLLSYAGRLQLIKS+L  +Q Y
Sbjct: 750  GELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNY 809

Query: 182  WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
            W+ IF L +K+I+ +++ CR FL TGK E +K+A VAW  + +P   GG NV+N+K WNR
Sbjct: 810  WAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNR 869

Query: 362  AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQCSWIVRKI 505
            AA+ K LW++  +++ +W++WIH+YYIK QD+  +   +Q +WI+RKI
Sbjct: 870  AAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTWILRKI 917


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  190 bits (483), Expect = 2e-46
 Identities = 85/169 (50%), Positives = 119/169 (70%)
 Frame = +2

Query: 2    GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
            G LPFRYLGVPL+ KKL    C+PL+ KI  R   W + LLSYAGRLQL+K++L+ +Q Y
Sbjct: 753  GSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNY 812

Query: 182  WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
            W QIF LP+K+IK ++  CR FL TG  + S +A VAW+ + +P   GGLNV N+ LWN+
Sbjct: 813  WGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNK 872

Query: 362  AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQCSWIVRKIF 508
            AAI K LW++  +++ +W++W++ YYIK Q++  +      SWI+RKIF
Sbjct: 873  AAILKLLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIF 921


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  187 bits (475), Expect = 1e-45
 Identities = 82/149 (55%), Positives = 113/149 (75%)
 Frame = +2

Query: 5    QLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMYW 184
            +LPF+YLGVPLS KKL  +   PL+ K++ RIN W +K LSYAGR QL+K+VLFGVQ  W
Sbjct: 559  ELPFKYLGVPLSSKKLNTIQWYPLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALW 618

Query: 185  SQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNRA 364
            +Q+F++P KIIKLI+  CR +L +G    +K+AL+AW++V  P + GGL ++NLK+WNR+
Sbjct: 619  AQLFIIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRS 678

Query: 365  AICKHLWSLAQEKNSIWIKWIHTYYIKSQ 451
            A+ K  W LA +++ +WIKWIH YYIK Q
Sbjct: 679  AVTKLCWDLANKEDKLWIKWIHAYYIKGQ 707


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  182 bits (461), Expect = 5e-44
 Identities = 76/168 (45%), Positives = 121/168 (72%)
 Frame = +2

Query: 2   GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
           GQLPF+YLGVP++ KKL+ +   PL+ KI+G+I  W ++LLSYAGRLQL+ SV+F +  Y
Sbjct: 136 GQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNY 195

Query: 182 WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
           W   F  P+ +++ I+  CR+FL TG  EGS+++ VAW+Q+  P   GGLN++++ +WN+
Sbjct: 196 WLNCFPFPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNK 255

Query: 362 AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQCSWIVRKI 505
           A + K LW+L+ +++S+W+KWI  YY+K  +L  ++  +  SWI++ I
Sbjct: 256 ANLMKLLWNLSSKEDSLWVKWIQAYYVKRSELMHIEMKNTDSWIMKAI 303


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  178 bits (452), Expect = 6e-43
 Identities = 76/168 (45%), Positives = 117/168 (69%)
 Frame = +2

Query: 2   GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
           G LP RYLGVPLS KKL +    PLV KI+G+I  W+SKLLS AGR+QL++S++  +  Y
Sbjct: 239 GTLPVRYLGVPLSCKKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQY 298

Query: 182 WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
           W  +F +P+K+I+ I   CR F+ +G AE  +++LVAW+QV KP   GGLN++NL+LWN 
Sbjct: 299 WMSVFPMPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNV 358

Query: 362 AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQCSWIVRKI 505
            A+ K LW++  +++++W+KWIH Y++K  ++         +WI++ +
Sbjct: 359 TAMLKCLWNICSKEDNLWVKWIHAYFLKGDNVMSATIKSNSTWILKSV 406


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  171 bits (433), Expect = 1e-40
 Identities = 78/165 (47%), Positives = 113/165 (68%)
 Frame = +2

Query: 2    GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
            G++PFRYLG+PLS KKL I   Q L+ KI+GRI  W++ LLSYAGR+QLI+SV+F    +
Sbjct: 578  GKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINF 637

Query: 182  WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
            W Q   LP+ +I  I   CR FL  G +  S+++ +AWE+V  P   GGLN++NL +WN+
Sbjct: 638  WMQCLPLPKFVIMRINAICRSFLWIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNK 697

Query: 362  AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQCSWIV 496
             +I K LW++  + +++WIKW+HTYYI+ Q ++ M      SWI+
Sbjct: 698  ISILKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKKSHSWIM 742


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  152 bits (385), Expect = 4e-35
 Identities = 68/168 (40%), Positives = 99/168 (58%)
 Frame = +2

Query: 2    GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
            G  P RYLG+PL   KL + DC PL+ +I  RI  W +K+LS+AGRLQLI+SVL  +Q+Y
Sbjct: 587  GTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVY 646

Query: 182  WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
            W+   +LP+K++K I++  R FL  G   G     VAW ++  P   GGL + +L  WN+
Sbjct: 647  WASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNK 706

Query: 362  AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQCSWIVRKI 505
            A +  H+W+L    ++ W  W+  Y +K    +    P  CSW  RK+
Sbjct: 707  ALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLPSICSWNWRKL 754


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score =  151 bits (382), Expect = 8e-35
 Identities = 65/168 (38%), Positives = 102/168 (60%)
 Frame = +2

Query: 2    GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
            GQLP RYLGVPL+ KKL I    PL+ KI  RI  W SKLL+  GR+Q++   +  +  +
Sbjct: 578  GQLPVRYLGVPLTSKKLNIKYYLPLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQF 637

Query: 182  WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
            W Q   +P  +IK I   CR F+ +   E ++++ +AW  V +P   GGLN+ NLK+WN 
Sbjct: 638  WMQCLPIPMSVIKKIDSMCRSFVWSRSTEITRKSPIAWNSVCRPKGQGGLNIFNLKVWNH 697

Query: 362  AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQCSWIVRKI 505
              +   LW+L ++ +++W+KWIH +YIK+  +      +  SW+++ +
Sbjct: 698  ITVLNCLWNLCKKVDNLWVKWIHAHYIKNSSVMNTMVTNNFSWVLKNV 745


>gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like protein, related
           [Medicago truncatula]
          Length = 120

 Score =  149 bits (377), Expect = 3e-34
 Identities = 73/112 (65%), Positives = 91/112 (81%)
 Frame = +2

Query: 47  KLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMYWSQIFLLPQKIIKLI 226
           K  ++ C+ L  +I+ RI  W+SK LSYAGRLQLIKSVLFGVQ YWSQ+F+LPQK++KLI
Sbjct: 10  KFNLIKCE-LPFRIIYRIENWSSKFLSYAGRLQLIKSVLFGVQTYWSQVFVLPQKVLKLI 68

Query: 227 QQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNRAAICKHL 382
           Q ACRVFL TGK+  SKRAL+AWE++  P  AGG NV++LK+WN+AAICK L
Sbjct: 69  QTACRVFLWTGKSGTSKRALIAWERICLPKTAGGWNVIDLKVWNQAAICKLL 120


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score =  143 bits (361), Expect = 2e-32
 Identities = 67/168 (39%), Positives = 101/168 (60%)
 Frame = +2

Query: 2   GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
           G L  RYLG+PL  ++L   DC PL+  I  RI  W++++LS+A  LQL++ VL  +Q+Y
Sbjct: 217 GHLLIRYLGLPLLSRRLRSSDCDPLIQCITSRIRSWSARVLSFASSLQLVRLVLRSLQVY 276

Query: 182 WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
           W+ +F+LP K+ K + +  R +L  GK EG   A VAW++V  P   GGL + +   WN+
Sbjct: 277 WASVFMLPMKVHKDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAICDGSSWNK 336

Query: 362 AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQCSWIVRKI 505
           A+  K LW L  +  S+W+ W+  Y +K + L+E+ A    SW  R I
Sbjct: 337 ASTLKILWLLLVKSGSLWVAWVEAYILKGRSLWEIDAGAGRSWCFRAI 384


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  142 bits (358), Expect = 5e-32
 Identities = 68/169 (40%), Positives = 102/169 (60%), Gaps = 1/169 (0%)
 Frame = +2

Query: 2    GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
            GQLP RYLG+PL  K+L+  DC PL+ ++  RI  W S+ LSYAGRL LI SVL+ +  +
Sbjct: 765  GQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNF 824

Query: 182  WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
            W   F LP+K I+ +++ C  FL +G    S +A ++W  V KP   GGL + +LK  N 
Sbjct: 825  WLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEAND 884

Query: 362  AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEM-QAPHQCSWIVRKI 505
                K +W +    NS+W+KW+  + +++   +E+ Q   Q SWI +K+
Sbjct: 885  VCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKL 933


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score =  139 bits (351), Expect = 3e-31
 Identities = 63/152 (41%), Positives = 96/152 (63%)
 Frame = +2

Query: 2   GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
           G LP RYLG+PL   +L   DC PL+ +I  RI  W++++LS+AGRLQL++SVL  +Q+Y
Sbjct: 32  GHLPVRYLGLPLLFGRLQSCDCDPLIQRITSRIRSWSARVLSFAGRLQLVRSVLRSLQVY 91

Query: 182 WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
           W+ +F+LP K+ + + +  R +L  GK EG   A VAW++V  P   GGL + +   WN 
Sbjct: 92  WASVFMLPMKVHRDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAIRDGSSWNI 151

Query: 362 AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDL 457
           A+  K LW L  +  S+W+ W+  Y +K + +
Sbjct: 152 ASTLKILWLLLVKSGSLWVAWVEAYILKGRSM 183


>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
          Length = 303

 Score =  135 bits (340), Expect = 6e-30
 Identities = 72/169 (42%), Positives = 100/169 (59%), Gaps = 1/169 (0%)
 Frame = +2

Query: 2   GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
           G  PFRYLGVPL   +L +    PL+ KI G I  W+ K LSYAG+L+LI++V+ G+  +
Sbjct: 88  GGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNF 147

Query: 182 WSQIFLLPQKIIKLIQQACRVFL*TGKAE-GSKRALVAWEQVMKPLHAGGLNVVNLKLWN 358
           W  IF LPQ ++  I  +CR FL  GKA+ G K+ LVAW  V  P   GGL + NLK WN
Sbjct: 148 WIGIFPLPQSVLDRINASCRNFL-WGKADIGKKKPLVAWSVVCSPKREGGLGLFNLKDWN 206

Query: 359 RAAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQCSWIVRKI 505
            A +   LW    +K+S+   W+H YY +  D++        S +++KI
Sbjct: 207 LALLSCILWDFHCKKDSL---WVHHYYFRRSDVWNYNTSSSYSVLIKKI 252


>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 316

 Score =  134 bits (338), Expect = 1e-29
 Identities = 66/168 (39%), Positives = 95/168 (56%)
 Frame = +2

Query: 2   GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
           G  PFRYLG PL   +L +    PL+ KI+G I  W  K LSY G+L+LIK+V+ G+  +
Sbjct: 121 GGFPFRYLGAPLLSSRLNVCHYAPLLYKIVGLIQGWNKKSLSYVGKLELIKAVIQGIMNF 180

Query: 182 WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
           W +IF LPQ ++  I  +C  FL +    G  + LVAW  V  P   GGL + NLK WN 
Sbjct: 181 WMRIFPLPQSVLDRINASCCNFLWSKADIGKNKPLVAWPVVCSPKQEGGLGLFNLKDWNL 240

Query: 362 AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQCSWIVRKI 505
           A +   LW    +K+S+ ++W+H YY +  D +        S +++KI
Sbjct: 241 ALLSHILWDFHCKKDSLRVRWVHHYYFRRSDEWNYNISSSNSVLIKKI 288


>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 239

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/153 (41%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
 Frame = +2

Query: 2   GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
           G  PFRYLGVPL   +L +    PL+ KI G I  W+ K LSYAG+L+LI++V+ G+  +
Sbjct: 88  GGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNF 147

Query: 182 WSQIFLLPQKIIKLIQQACRVFL*TGKAE-GSKRALVAWEQVMKPLHAGGLNVVNLKLWN 358
           W +IF L Q ++  I  +C  FL  GKA+ G  ++L+AW  V  P   GGL + NLK WN
Sbjct: 148 WMKIFPLSQSVLDRINASCCNFL-WGKADIGKNKSLIAWSVVCSPKKEGGLGLFNLKDWN 206

Query: 359 RAAICKHLWSLAQEKNSIWIKWIHTYYIKSQDL 457
              + + LW    +K+ +W++W+H YY ++ D+
Sbjct: 207 LTLLSRILWDFHCKKDFLWVRWVHHYYFRASDV 239


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  134 bits (337), Expect = 1e-29
 Identities = 69/169 (40%), Positives = 99/169 (58%), Gaps = 1/169 (0%)
 Frame = +2

Query: 2   GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
           GQLP RYLG+PL  K+LT  D  PL+ +I  RI  W  +  S+AGR  LIKSVL+ +  +
Sbjct: 412 GQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNF 471

Query: 182 WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
           W   F LP++ I+ I + C  FL +G    S +A ++W+ V KP   GGL + NLK  N 
Sbjct: 472 WLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEAND 531

Query: 362 AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEM-QAPHQCSWIVRKI 505
            +  K +W +    NS+W KW+  Y I+ + ++ + Q+    SWI RKI
Sbjct: 532 VSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKI 580


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score =  133 bits (335), Expect = 2e-29
 Identities = 61/168 (36%), Positives = 99/168 (58%)
 Frame = +2

Query: 2   GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
           G+LP RYL +PL  K+ T  D  PL+ +I  RI  W ++ LSYAGRL L+ SVL+ +  +
Sbjct: 283 GRLPVRYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSICNF 342

Query: 182 WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
           W   F LP++ ++ I + C  FL +G    + +A +AWE V +P   GGL + ++K  N 
Sbjct: 343 WLSAFRLPRECVREIDKLCSAFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEAND 402

Query: 362 AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQCSWIVRKI 505
               K +W +  + +S+W++WI TY +K    +  ++  Q SW+ +K+
Sbjct: 403 VCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQGSWMWKKL 450


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  131 bits (330), Expect = 8e-29
 Identities = 63/171 (36%), Positives = 95/171 (55%)
 Frame = +2

Query: 2    GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
            G LP RYLG+PL  +KL I + +PL+ KI  R   W +K LS+AGR+QLI SV+FG   +
Sbjct: 758  GTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINF 817

Query: 182  WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
            W   FLLP+  IK I+  C  FL +G  E +K   V+W  +  P   GGL +  L  WN+
Sbjct: 818  WMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNK 877

Query: 362  AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQCSWIVRKIFGM 514
                + +W L   K+S+W  W H +++     + ++     SW  +++  +
Sbjct: 878  TLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSL 928


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  129 bits (324), Expect = 4e-28
 Identities = 64/169 (37%), Positives = 102/169 (60%), Gaps = 1/169 (0%)
 Frame = +2

Query: 2    GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
            G LP +YLG+PL  K++T  D  PLV KI  RI  W ++ LS+AGRLQLIKSVL  +  +
Sbjct: 912  GTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNF 971

Query: 182  WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
            W  +F LP+  ++ I++    FL +G    +K+A +AW +V K    GGL +  LK  N 
Sbjct: 972  WLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANE 1031

Query: 362  AAICKHLWSLAQEKNSIWIKWIHTYYIKSQDLFEMQAPHQC-SWIVRKI 505
             ++ K +W +   ++S+W+KW++ + I+ +  + ++      SW+ RKI
Sbjct: 1032 VSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWLWRKI 1080


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score =  129 bits (323), Expect = 5e-28
 Identities = 57/147 (38%), Positives = 86/147 (58%)
 Frame = +2

Query: 2    GQLPFRYLGVPLSQKKLTIMDCQPLVLKILGRINCWASKLLSYAGRLQLIKSVLFGVQMY 181
            G LP RYLGVPL  +K+   D QPLV +I  R   W ++ LS+AGRLQL+KSV++    +
Sbjct: 759  GSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINF 818

Query: 182  WSQIFLLPQKIIKLIQQACRVFL*TGKAEGSKRALVAWEQVMKPLHAGGLNVVNLKLWNR 361
            W+ +F+ P + ++ ++Q C  FL +G    ++ A ++W  V  P  AGGL +  L  WNR
Sbjct: 819  WASVFIFPNQCLQKLEQMCNAFLWSGAPNSARGAKISWNIVCSPKEAGGLGLKRLSSWNR 878

Query: 362  AAICKHLWSLAQEKNSIWIKWIHTYYI 442
                K +W L     S+W+ W+  + I
Sbjct: 879  ILALKLIWLLFTSAGSLWVSWVRLHLI 905


Top