BLASTX nr result

ID: Mentha23_contig00043549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00043549
         (405 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239098.1| PREDICTED: ribonuclease H2 subunit B-like [S...    61   2e-07
ref|XP_006348740.1| PREDICTED: ribonuclease H2 subunit B-like is...    60   4e-07
ref|XP_006348739.1| PREDICTED: ribonuclease H2 subunit B-like is...    60   4e-07
ref|XP_007222531.1| hypothetical protein PRUPE_ppa009861mg [Prun...    57   3e-06
ref|XP_004291258.1| PREDICTED: ribonuclease H2 subunit B-like [F...    56   6e-06

>ref|XP_004239098.1| PREDICTED: ribonuclease H2 subunit B-like [Solanum lycopersicum]
          Length = 333

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 25/47 (53%), Positives = 31/47 (65%)
 Frame = +3

Query: 264 CLLPRKMDWWEGADETRVLIAQDPSTSGKNQGSILSLRHPRTGNTAC 404
           C+    M WWEG DE RVLIA++PS  G     +LSLRHP++GN  C
Sbjct: 49  CVRKSSMAWWEGLDEARVLIAKEPSKDGNKVEQLLSLRHPKSGNATC 95


>ref|XP_006348740.1| PREDICTED: ribonuclease H2 subunit B-like isoform X2 [Solanum
           tuberosum]
          Length = 332

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/47 (53%), Positives = 31/47 (65%)
 Frame = +3

Query: 264 CLLPRKMDWWEGADETRVLIAQDPSTSGKNQGSILSLRHPRTGNTAC 404
           C+    M WWEG DE RVLIA++PS  G     +LSLRHP++GN  C
Sbjct: 49  CVRKVSMAWWEGLDEARVLIAKEPSKDGDKVEQLLSLRHPKSGNATC 95


>ref|XP_006348739.1| PREDICTED: ribonuclease H2 subunit B-like isoform X1 [Solanum
           tuberosum]
          Length = 333

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/47 (53%), Positives = 31/47 (65%)
 Frame = +3

Query: 264 CLLPRKMDWWEGADETRVLIAQDPSTSGKNQGSILSLRHPRTGNTAC 404
           C+    M WWEG DE RVLIA++PS  G     +LSLRHP++GN  C
Sbjct: 49  CVRKVSMAWWEGLDEARVLIAKEPSKDGDKVEQLLSLRHPKSGNATC 95


>ref|XP_007222531.1| hypothetical protein PRUPE_ppa009861mg [Prunus persica]
           gi|462419467|gb|EMJ23730.1| hypothetical protein
           PRUPE_ppa009861mg [Prunus persica]
          Length = 274

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = +3

Query: 282 MDWWEGADETRVLIAQDPSTSGKNQGSILSLRHPRTGNTAC 404
           M WWEG DE R+LIA D + +G + G +LSLRHP++GN+ C
Sbjct: 1   MAWWEGFDEIRLLIAADTAETGNDVGQLLSLRHPKSGNSMC 41


>ref|XP_004291258.1| PREDICTED: ribonuclease H2 subunit B-like [Fragaria vesca subsp.
           vesca]
          Length = 281

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +3

Query: 282 MDWWEGADETRVLIAQDPSTSGKNQGSILSLRHPRTGNTAC 404
           M W +G DETR+LIA DP  +G   G ++SLRHP++GNT C
Sbjct: 1   MAWCQGFDETRLLIAADPPATGDGAGKMISLRHPKSGNTMC 41


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