BLASTX nr result

ID: Mentha23_contig00042690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00042690
         (542 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007010390.1| Retrotransposon, unclassified-like protein [...    57   4e-06
ref|XP_007049665.1| Uncharacterized protein TCM_002766 [Theobrom...    55   8e-06

>ref|XP_007010390.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
            gi|508727303|gb|EOY19200.1| Retrotransposon,
            unclassified-like protein [Theobroma cacao]
          Length = 1368

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
 Frame = +3

Query: 30   SYEEEL*ALLHILNLVVGFS-SHIWVEINVAAVITLLISGKYRSAEIRHVMTCIRLRLQG 206
            S + EL AL   L L + ++ S +W+E++   VI ++ +    S +I++++  IR  LQ 
Sbjct: 1221 SLQAELLALHRGLCLCMEYNVSRVWIEVDAQVVIQMIQNHHKGSYKIQYLLESIRKCLQV 1280

Query: 207  VQVRFSYIHREGNRLADFMERRG 275
            + VR S+IHREGN+ ADF+ + G
Sbjct: 1281 ISVRISHIHREGNQAADFLSKHG 1303


>ref|XP_007049665.1| Uncharacterized protein TCM_002766 [Theobroma cacao]
           gi|508701926|gb|EOX93822.1| Uncharacterized protein
           TCM_002766 [Theobroma cacao]
          Length = 241

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = +3

Query: 30  SYEEEL*ALLHILNLVVGFS-SHIWVEINVAAVITLLISGKYRSAEIRHVMTCIRLRLQG 206
           S + EL AL   L L + ++ S IW+E+N   V+ ++  G   S++ R+++  IR  L  
Sbjct: 149 SLQAELMALHRGLLLCIEYNVSRIWIEMNAKVVVQMIHEGNKGSSQTRYLLASIRKCLNA 208

Query: 207 VQVRFSYIHREGNRLADFMERRGLQTET*HTL 302
           +    S+IHREGN++ D +  +G   +  H L
Sbjct: 209 ISYCISHIHREGNQVVDHLSNQGHSDKNLHVL 240


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