BLASTX nr result
ID: Mentha23_contig00042006
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00042006
(317 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. olei... 104 1e-20
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 102 4e-20
gb|ABD96942.1| hypothetical protein [Cleome spinosa] 100 2e-19
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 99 5e-19
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 99 5e-19
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 99 6e-19
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 98 1e-18
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 97 2e-18
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 96 4e-18
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 96 4e-18
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 96 5e-18
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 96 7e-18
emb|CAA73803.1| reverse transcriptase [Allium cepa] 95 1e-17
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 95 1e-17
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 94 1e-17
ref|NP_063981.1| orf129a gene product (mitochondrion) [Beta vulg... 94 2e-17
ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulg... 94 2e-17
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 93 4e-17
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 92 6e-17
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 92 6e-17
>emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. oleifera]
Length = 137
Score = 104 bits (260), Expect = 1e-20
Identities = 48/104 (46%), Positives = 69/104 (66%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
L +SP QAAF+KGR + +N LA ELI+ Y + S + + M+K+D+RKA+D + WDF+
Sbjct: 28 LRDCVSPNQAAFLKGRSLGENVLLASELIRDYNKSSCLRSS-MLKVDIRKAFDTVCWDFV 86
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
++L F P F+ WI C+TSP FS+A+NG GF G +GL
Sbjct: 87 IKILRAQGFPPLFVSWIQECITSPRFSVALNGELAGFFEGKKGL 130
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 102 bits (255), Expect = 4e-20
Identities = 47/104 (45%), Positives = 68/104 (65%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
L + I+ Q+AF+K R + +N LA EL+K Y + S I+ARC +KID+ KA+D + W FL
Sbjct: 201 LPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDS-ISARCAIKIDISKAFDSVQWSFL 259
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
L +NF P FIHWI C+T+ +FS+ +NG G+ + RGL
Sbjct: 260 TNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGL 303
>gb|ABD96942.1| hypothetical protein [Cleome spinosa]
Length = 402
Score = 100 bits (250), Expect = 2e-19
Identities = 52/99 (52%), Positives = 67/99 (67%)
Frame = -1
Query: 308 LISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFLKEV 129
LIS QAAF KGR + D+ LA EL+K Y R S + M+KID++KA+D ISWDF+ ++
Sbjct: 61 LISGNQAAFQKGRSMGDHIMLAAELVKDYNRPSAEPS-AMLKIDIKKAFDSISWDFILDI 119
Query: 128 LHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*R 12
L L+ FI WI C+TSP+FS+AING GF RG R
Sbjct: 120 LRALDLPLVFIGWIRECITSPSFSVAINGELAGFFRGKR 158
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/104 (44%), Positives = 67/104 (64%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
L ++ISP Q+AF+ GR + +N LA EL++ Y R I R M+K+DLRKA+D I WDF+
Sbjct: 501 LSQVISPFQSAFLPGRFLAENVLLATELVQGYNR-QNIDPRGMLKVDLRKAFDSIRWDFI 559
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
L + F++WI C+++PTFS+ +NG GF + RGL
Sbjct: 560 ISALKAIGIPDRFVYWITQCISTPTFSVCVNGNTGGFFKSTRGL 603
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 99.4 bits (246), Expect = 5e-19
Identities = 45/102 (44%), Positives = 67/102 (65%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
L I+ Q+AF+K R + +N LA EL+K Y + + I+ RC +KID+ KA+D + W FL
Sbjct: 969 LPNFIAGNQSAFVKDRLLIENLLLATELVKDYHKDT-ISGRCAIKIDISKAFDSVQWSFL 1027
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*R 12
K VL L+F P F+HW+M CVT+ +FS+ +NG G+ + R
Sbjct: 1028 KNVLSALDFPPEFVHWVMLCVTTASFSVQVNGELAGYFQSSR 1069
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/92 (48%), Positives = 61/92 (66%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
+H +IS +QA FI GR I DN LA EL+K Y R ++ RCM+KIDL KAYD + W FL
Sbjct: 347 IHTIISDSQAGFIPGRKIGDNIILAHELVKAYTR-KNVSPRCMLKIDLHKAYDSVEWPFL 405
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAING 42
++V+ GL F F W+M CV + ++I +NG
Sbjct: 406 EQVMEGLGFPDLFTKWVMKCVKTVNYTIVVNG 437
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 98.2 bits (243), Expect = 1e-18
Identities = 43/101 (42%), Positives = 68/101 (67%)
Frame = -1
Query: 308 LISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFLKEV 129
+ SP Q AF++GR + +N LA EL+ +Y R + + R M+KIDLRKA+D +SW+F+ ++
Sbjct: 4 IFSPNQGAFLEGRLMVENVLLATELVHEYNRPN-TSKRAMLKIDLRKAFDTVSWEFITKI 62
Query: 128 LHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
+ LN F+ W+ C+ +P FS++ING G+ +G RGL
Sbjct: 63 MQALNLPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGL 103
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/100 (44%), Positives = 71/100 (71%)
Frame = -1
Query: 305 ISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFLKEVL 126
ISP+Q+AF+KGR +T+N LA EL++ + + + I++R ++K+DLRKA+D + W F+ E L
Sbjct: 551 ISPSQSAFVKGRLLTENVLLATELVQGFGQAN-ISSRGVLKVDLRKAFDSVGWGFIIETL 609
Query: 125 HGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
N P F++WI C+TS +FSI ++G G+ +G +GL
Sbjct: 610 KAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGL 649
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/104 (40%), Positives = 69/104 (66%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
L K I+ Q AF+K R + +N LA EL+K Y + S +++RC +KID+ KA++ + W F+
Sbjct: 81 LPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKES-VSSRCAIKIDISKAFNSVQWSFI 139
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
+ +L ++F F+HWIM C+++ +FS+ +NG GF + RGL
Sbjct: 140 RNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGL 183
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 96.3 bits (238), Expect = 4e-18
Identities = 48/104 (46%), Positives = 66/104 (63%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
L K I Q+AF+K R + +N LA EL+K Y + S I+ RC +KID+ KA+D + W FL
Sbjct: 275 LPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDS-ISTRCAMKIDISKAFDSLQWSFL 333
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
VL +NF FIHWI C+++ +FSI +NG G+ R RGL
Sbjct: 334 THVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGL 377
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 95.9 bits (237), Expect = 5e-18
Identities = 43/92 (46%), Positives = 65/92 (70%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
L+ ++S Q+AF+KGR I DN L+ EL+K Y R GI+ RCMVKIDL+KAY+ + W F+
Sbjct: 222 LNSVVSENQSAFVKGRVIFDNIILSHELVKSYSR-KGISPRCMVKIDLQKAYNSVEWPFI 280
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAING 42
K ++ L F F++W+M C+T+ +++ ING
Sbjct: 281 KHLMLELGFSYKFVNWVMGCLTTASYTFNING 312
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 95.5 bits (236), Expect = 7e-18
Identities = 46/104 (44%), Positives = 67/104 (64%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
L + I+ Q+AFIK R + +N LA EL+K Y + S ++ RC +KID+ KA+D + W FL
Sbjct: 72 LPQFIAGNQSAFIKDRLLIENLLLATELVKDYHKDS-VSERCAIKIDISKAFDSVQWSFL 130
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
+ VL L+F F+HWIM CVT+ +FS+ +N G+ RGL
Sbjct: 131 RNVLLTLDFPQEFVHWIMLCVTTASFSVQVNRELAGYFNSLRGL 174
>emb|CAA73803.1| reverse transcriptase [Allium cepa]
Length = 137
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/104 (46%), Positives = 67/104 (64%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
L L+SP QAA++ GR I D+ L+ ELIK Y+R S T R M+K+D+ KA+D + W+ +
Sbjct: 28 LPTLVSPNQAAYLSGRNILDHVLLSHELIKGYKRKSA-TPRAMLKLDIMKAFDTLQWNSI 86
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
+L +NF P I WI C++SPTFSI ING GF +G+
Sbjct: 87 VRILGYMNFPPHIIAWIYECISSPTFSININGKNEGFFVSKQGI 130
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Frame = -1
Query: 311 KLISPA-----QAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISW 147
KL+ P+ Q+AF+K R + +N LA EL+K Y + S +T RC +KID+ KA+D + W
Sbjct: 848 KLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKES-VTPRCAMKIDISKAFDSVQW 906
Query: 146 DFLKEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
FL L LNF F HWI C+++ TFS+ +NG GF RGL
Sbjct: 907 QFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGL 953
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/104 (42%), Positives = 66/104 (63%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
L + I+ Q++F+K R + +N LA +L+K Y + S I+ RC +KID+ KA D + W FL
Sbjct: 107 LPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDS-ISERCAIKIDISKASDSVQWSFL 165
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
L ++F FIHWI C+T+P+FS+ +NG GF + RGL
Sbjct: 166 INTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGL 209
>ref|NP_063981.1| orf129a gene product (mitochondrion) [Beta vulgaris subsp.
vulgaris] gi|9049283|dbj|BAA99293.1| orf129a [Beta
vulgaris subsp. vulgaris]
Length = 129
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/90 (52%), Positives = 62/90 (68%)
Frame = -1
Query: 311 KLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFLKE 132
++I+ AQA FI G+ I DN LA ELIK Y + ++ RCM+K+DLRKAYD I W FL+
Sbjct: 7 EVINEAQAGFIPGKHIGDNILLATELIKGYSQ-KAVSPRCMIKVDLRKAYDSIEWSFLQC 65
Query: 131 VLHGLNFHPCFIHWIMTCVTSPTFSIAING 42
+L L F FI WIM CVT+ ++SI +NG
Sbjct: 66 MLSELGFPSQFITWIMECVTTVSYSILLNG 95
>ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulgaris subsp. maritima]
gi|346683183|ref|YP_004842114.1| hypothetical protein
BemaM_p069 [Beta macrocarpa]
gi|319439824|emb|CBX33299.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500101|emb|CBX24919.1|
hypothetical protein [Beta macrocarpa]
Length = 238
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/90 (52%), Positives = 62/90 (68%)
Frame = -1
Query: 311 KLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFLKE 132
++I+ AQA FI G+ I DN LA ELIK Y + ++ RCM+K+DLRKAYD I W FL+
Sbjct: 7 EVINEAQAGFIPGKHIGDNILLATELIKGYSQ-KAVSPRCMIKVDLRKAYDSIEWSFLQC 65
Query: 131 VLHGLNFHPCFIHWIMTCVTSPTFSIAING 42
+L L F FI WIM CVT+ ++SI +NG
Sbjct: 66 MLSELGFPSQFITWIMECVTTVSYSILLNG 95
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 92.8 bits (229), Expect = 4e-17
Identities = 45/100 (45%), Positives = 64/100 (64%)
Frame = -1
Query: 305 ISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFLKEVL 126
I+P Q+AFIK R + +N LA EL+K Y + S I++R +KID+ KA+D + W FL VL
Sbjct: 705 IAPNQSAFIKDRLMMENLLLASELVKDYHKES-ISSRSALKIDISKAFDFVQWPFLINVL 763
Query: 125 HGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
++ FIHWI C+ + +FS+ +NG GF R RGL
Sbjct: 764 KAIHLPEMFIHWIELCIGTASFSVQVNGELSGFFRSERGL 803
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 92.4 bits (228), Expect = 6e-17
Identities = 41/104 (39%), Positives = 68/104 (65%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
L+++ISP+Q+AF+ GR +++N LA E++ Y I++R M+K+DLRKA+D + WDF+
Sbjct: 549 LNEVISPSQSAFLPGRLLSENVLLATEIVHGYN-TKNISSRGMLKVDLRKAFDSVRWDFI 607
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
L F+ WI C+++P FS+ +NG + GF + +GL
Sbjct: 608 ISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGL 651
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 92.4 bits (228), Expect = 6e-17
Identities = 41/104 (39%), Positives = 68/104 (65%)
Frame = -1
Query: 317 LHKLISPAQAAFIKGRCITDNFFLAQELIKKYERVSGITARCMVKIDLRKAYDCISWDFL 138
L+++ISP+Q+AF+ GR +++N LA E++ Y I++R M+K+DLRKA+D + WDF+
Sbjct: 549 LNEVISPSQSAFLPGRLLSENVLLATEIVHGYN-TKNISSRGMLKVDLRKAFDSVRWDFI 607
Query: 137 KEVLHGLNFHPCFIHWIMTCVTSPTFSIAINGGAHGFIRG*RGL 6
L F+ WI C+++P FS+ +NG + GF + +GL
Sbjct: 608 ISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGL 651