BLASTX nr result
ID: Mentha23_contig00041569
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00041569
(336 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 66 4e-09
emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera] 63 4e-08
gb|EXB74907.1| hypothetical protein L484_018615 [Morus notabilis] 62 1e-07
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 58 2e-06
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 58 2e-06
ref|NP_001041883.1| Os01g0123000 [Oryza sativa Japonica Group] g... 58 2e-06
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group] 58 2e-06
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 57 3e-06
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 57 3e-06
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 57 3e-06
gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indi... 56 5e-06
ref|NP_001051816.1| Os03g0835200 [Oryza sativa Japonica Group] g... 56 5e-06
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 56 5e-06
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 56 6e-06
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/67 (41%), Positives = 46/67 (68%)
Frame = +1
Query: 16 EKGNMSVDEYFMKMRSFLDQLTAIGKPITEGELIEYILNGFGSEYEVLIVNVKQRVDDSR 195
+KG +S+++Y +KMR+ D L+A GKP+ + +LI YIL G G E+E ++VN+ R +
Sbjct: 41 KKGALSINDYVLKMRNIADMLSASGKPVPDEDLILYILGGLGPEFETIVVNITSRSEAIS 100
Query: 196 IDEVQYV 216
+ EV Y+
Sbjct: 101 LQEVHYL 107
>emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera]
Length = 735
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +1
Query: 16 EKGNMSVDEYFMKMRSFLDQLTAIGKPITEGELIEYILNGFGSEYEVLIVNVKQRVDDSR 195
+KG +S+++Y +KMR+ D L+ GKP+ +LI YIL G G E+E ++VN+ R +
Sbjct: 140 KKGALSINDYVLKMRNIADMLSTSGKPVPYEDLILYILGGLGPEFETIVVNITSRSEAIS 199
Query: 196 IDEVQYV 216
+ EV Y+
Sbjct: 200 LQEVHYL 206
>gb|EXB74907.1| hypothetical protein L484_018615 [Morus notabilis]
Length = 106
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = +1
Query: 1 EPSHYEKGNMSVDEYFMKMRSFLDQLTAIGKPITEGELIEYILNGFGSEYEVLIVNVKQR 180
+P +KG+MS+D+Y +KMRS +D L A G+ I+ +L+ IL G GSEY+ ++VN+ R
Sbjct: 46 QPQPVKKGSMSIDDYVLKMRSIVDNLNATGQVISNDDLVLCILGGLGSEYDPVVVNLTSR 105
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 57.8 bits (138), Expect = 2e-06
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +1
Query: 16 EKGNMSVDEYFMKMRSFLDQLTAIGKPITEGELIEYILNGFGSEYEVLI 162
+KG MS+ EY KMRS D++ A GKP+ E EL+ YI+NG SE++ +
Sbjct: 141 QKGPMSISEYIAKMRSLADEMAAAGKPLDEEELVAYIINGLDSEFDAAV 189
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 57.8 bits (138), Expect = 2e-06
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +1
Query: 16 EKGNMSVDEYFMKMRSFLDQLTAIGKPITEGELIEYILNGFGSEYEVLI 162
+KG MS+ EY KMRS D++ A GKP+ E EL+ YI+NG SE++ +
Sbjct: 141 QKGPMSISEYIAKMRSLADEMAATGKPLDEEELVAYIINGLDSEFDAAV 189
>ref|NP_001041883.1| Os01g0123000 [Oryza sativa Japonica Group]
gi|113531414|dbj|BAF03797.1| Os01g0123000 [Oryza sativa
Japonica Group] gi|215741345|dbj|BAG97840.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 360
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +1
Query: 16 EKGNMSVDEYFMKMRSFLDQLTAIGKPITEGELIEYILNGFGSEYEVLIVNVKQRVDDSR 195
+KG MSV EY KMR+ D+L A GKPI + +LI YI+NG + ++ ++ + RV+
Sbjct: 142 QKGTMSVTEYVAKMRAIADELAAAGKPIDQDDLIAYIINGLDANFDPVVEALVARVEPIT 201
Query: 196 IDEV 207
+ E+
Sbjct: 202 VQEM 205
>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = +1
Query: 16 EKGNMSVDEYFMKMRSFLDQLTAIGKPITEGELIEYILNGFGSEYEVLIVNVKQRVDDSR 195
+KGN S+ EY KM++ D++ A GKP+ + ELI YILNG +++ ++ + RV+
Sbjct: 274 QKGNSSISEYIGKMKTLADEVAAAGKPLDDEELIAYILNGLDEDFDSVVSTIVGRVEPVT 333
Query: 196 IDEV 207
+ EV
Sbjct: 334 VAEV 337
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +1
Query: 16 EKGNMSVDEYFMKMRSFLDQL-TAIGKPITEGELIEYILNGFGSEYEVLIVNVKQRVDDS 192
+KGNMS EYF KM+S D++ TA G+PI E ELI+YI+ G G Y ++ V RV+
Sbjct: 136 KKGNMSTPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGEGYSEVVSAVCARVEPI 195
Query: 193 RIDEV 207
+ ++
Sbjct: 196 SVSDL 200
>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1621
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +1
Query: 16 EKGNMSVDEYFMKMRSFLDQL-TAIGKPITEGELIEYILNGFGSEYEVLIVNVKQRVDDS 192
+KGNMS EYF KM+S D++ TA G+PI E ELI+YI+ G G Y ++ V RV+
Sbjct: 222 KKGNMSTPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGEGYSEVVSAVCARVEPI 281
Query: 193 RIDEV 207
+ ++
Sbjct: 282 SVSDL 286
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +1
Query: 16 EKGNMSVDEYFMKMRSFLDQL-TAIGKPITEGELIEYILNGFGSEYEVLIVNVKQRVDDS 192
+KGNMS EYF KM+S D++ TA G+PI E ELI+YI+ G G Y ++ V RV+
Sbjct: 254 KKGNMSTPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGEGYSEVVSAVCARVEPI 313
Query: 193 RIDEV 207
+ ++
Sbjct: 314 SVSDL 318
>gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indica Group]
Length = 506
Score = 56.2 bits (134), Expect = 5e-06
Identities = 25/73 (34%), Positives = 44/73 (60%)
Frame = +1
Query: 16 EKGNMSVDEYFMKMRSFLDQLTAIGKPITEGELIEYILNGFGSEYEVLIVNVKQRVDDSR 195
+KGNMS+ EY KM++ D++ + GKP+ E +L+ Y+LNG ++E ++ + R + +
Sbjct: 138 QKGNMSISEYCGKMKALADEIASSGKPLDEEDLVAYVLNGLDDDFEPVVSAIVARNESTT 197
Query: 196 IDEVQYVFPNI*N 234
+ EV N N
Sbjct: 198 MVEVYSQLHNFEN 210
>ref|NP_001051816.1| Os03g0835200 [Oryza sativa Japonica Group]
gi|108711950|gb|ABF99745.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group] gi|113550287|dbj|BAF13730.1|
Os03g0835200 [Oryza sativa Japonica Group]
gi|215686947|dbj|BAG90768.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215704113|dbj|BAG92953.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 270
Score = 56.2 bits (134), Expect = 5e-06
Identities = 23/64 (35%), Positives = 42/64 (65%)
Frame = +1
Query: 16 EKGNMSVDEYFMKMRSFLDQLTAIGKPITEGELIEYILNGFGSEYEVLIVNVKQRVDDSR 195
+KGNMS+ EY KM++ D++ + GKP+ E +L+ Y+LNG ++E ++ + R + +
Sbjct: 138 QKGNMSISEYCGKMKALADEIASSGKPLDEEDLVAYVLNGLDDDFEPVVSAIVARNESTT 197
Query: 196 IDEV 207
+ EV
Sbjct: 198 MAEV 201
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 56.2 bits (134), Expect = 5e-06
Identities = 23/64 (35%), Positives = 42/64 (65%)
Frame = +1
Query: 16 EKGNMSVDEYFMKMRSFLDQLTAIGKPITEGELIEYILNGFGSEYEVLIVNVKQRVDDSR 195
+KGNMS+ EY KM++ D++ + GKP+ E +L+ Y+LNG ++E ++ + R + +
Sbjct: 138 QKGNMSISEYCGKMKALADEIASSGKPLDEEDLVAYVLNGLDDDFEPVVSAIVARNESTT 197
Query: 196 IDEV 207
+ EV
Sbjct: 198 MAEV 201
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1
Query: 19 KGNMSVDEYFMKMRSFLDQLTAIGKPITEGELIEYILNGFGSEYEVLI 162
KG MS+ EY KMRS D++ A GKP+ E EL+ YI+NG SE++ +
Sbjct: 133 KGPMSMSEYIAKMRSLADKMAATGKPLDEEELVAYIINGLDSEFDAAV 180