BLASTX nr result

ID: Mentha23_contig00041314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00041314
         (325 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363194.1| PREDICTED: transcription factor TFIIIB compo...    58   1e-06
ref|XP_006363193.1| PREDICTED: transcription factor TFIIIB compo...    58   1e-06
ref|XP_006363192.1| PREDICTED: transcription factor TFIIIB compo...    58   1e-06

>ref|XP_006363194.1| PREDICTED: transcription factor TFIIIB component B''-like isoform
           X3 [Solanum tuberosum]
          Length = 702

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
 Frame = -3

Query: 323 VDLSSLGFTRTSPTKSASEFPLTEESINLTEVPQMD-SSSHMEGLLEVPAKLASRRAKTG 147
           +D S  GF     T+SA EFP+ EE +    +P  D  + H E   ++P +   +R KT 
Sbjct: 271 LDFSVRGFDNNIITESAHEFPVHEEYVAEASLPDADIPAKHSEATSQMPEEPVPQRPKTK 330

Query: 146 DIKTNSASDPDPQQQKASASSLENGAGRSLRARKSDTNIFKLVDE-DED 3
             K +++        + SA S ENG  RSLR+R+   N  +LVDE DED
Sbjct: 331 KQKFSAS--------ELSAISEENGESRSLRSRRKSVNASRLVDEFDED 371


>ref|XP_006363193.1| PREDICTED: transcription factor TFIIIB component B''-like isoform
           X2 [Solanum tuberosum]
          Length = 709

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
 Frame = -3

Query: 323 VDLSSLGFTRTSPTKSASEFPLTEESINLTEVPQMD-SSSHMEGLLEVPAKLASRRAKTG 147
           +D S  GF     T+SA EFP+ EE +    +P  D  + H E   ++P +   +R KT 
Sbjct: 278 LDFSVRGFDNNIITESAHEFPVHEEYVAEASLPDADIPAKHSEATSQMPEEPVPQRPKTK 337

Query: 146 DIKTNSASDPDPQQQKASASSLENGAGRSLRARKSDTNIFKLVDE-DED 3
             K +++        + SA S ENG  RSLR+R+   N  +LVDE DED
Sbjct: 338 KQKFSAS--------ELSAISEENGESRSLRSRRKSVNASRLVDEFDED 378


>ref|XP_006363192.1| PREDICTED: transcription factor TFIIIB component B''-like isoform
           X1 [Solanum tuberosum]
          Length = 714

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
 Frame = -3

Query: 323 VDLSSLGFTRTSPTKSASEFPLTEESINLTEVPQMD-SSSHMEGLLEVPAKLASRRAKTG 147
           +D S  GF     T+SA EFP+ EE +    +P  D  + H E   ++P +   +R KT 
Sbjct: 283 LDFSVRGFDNNIITESAHEFPVHEEYVAEASLPDADIPAKHSEATSQMPEEPVPQRPKTK 342

Query: 146 DIKTNSASDPDPQQQKASASSLENGAGRSLRARKSDTNIFKLVDE-DED 3
             K +++        + SA S ENG  RSLR+R+   N  +LVDE DED
Sbjct: 343 KQKFSAS--------ELSAISEENGESRSLRSRRKSVNASRLVDEFDED 383


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