BLASTX nr result

ID: Mentha23_contig00040575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00040575
         (416 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    95   1e-17
ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    94   2e-17
gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus...    94   2e-17
ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    89   5e-16
ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    88   1e-15
dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]                88   1e-15
gb|EPS66294.1| hypothetical protein M569_08482, partial [Genlise...    72   1e-10
ref|XP_007030911.1| RING/U-box superfamily protein, putative iso...    55   8e-06

>ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           lycopersicum]
          Length = 432

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 8/116 (6%)
 Frame = +3

Query: 3   LTRTGSYAPTLARERSSRRGFRTGGAEGTGLAGQFYWKMDKPEPESKSDRW------TIF 164
           L R  S+  TL R+ SSR+G+RTG  +G+    +   +M+  EPE KSDRW        F
Sbjct: 318 LNRAKSFGGTLPRDTSSRKGYRTGTGDGSNRGSRSNKRMEWSEPEPKSDRWIFTMTPPFF 377

Query: 165 ARGLSMRSTKATAEAGE--SSGSHGPPMKLPSFKCLEPKTADETGLMTEDRNKSPV 326
           +RG SM+S +  AEAGE  +SGS    +KLPSFKCLEPK  DE  LM+ D  + PV
Sbjct: 378 SRGSSMKSPRVGAEAGEGSTSGSMRTAVKLPSFKCLEPK-GDEASLMSTDSARPPV 432


>ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           tuberosum]
          Length = 433

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 8/116 (6%)
 Frame = +3

Query: 3   LTRTGSYAPTLARERSSRRGFRTGGAEGTGLAGQFYWKMDKPEPESKSDRW------TIF 164
           L R  S+  TL R+ SSR+G+RTG  +G+    +   +M+  EPE KSDRW        F
Sbjct: 319 LNRAKSFGGTLPRDTSSRKGYRTGTGDGSNRGSRSNKRMEWSEPEPKSDRWIFTMAPPFF 378

Query: 165 ARGLSMRSTKATAEAGE--SSGSHGPPMKLPSFKCLEPKTADETGLMTEDRNKSPV 326
           +RG SM+S +  AEAGE  +SGS    +KLPSFKCLEPK  DE  LM+ D  + PV
Sbjct: 379 SRGSSMKSPRVGAEAGEGSTSGSLRTAVKLPSFKCLEPK-GDEASLMSTDSARPPV 433


>gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus guttatus]
          Length = 383

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 52/100 (52%), Positives = 65/100 (65%), Gaps = 6/100 (6%)
 Frame = +3

Query: 24  APTLARERSSRRGFRTGGA---EGTG---LAGQFYWKMDKPEPESKSDRWTIFARGLSMR 185
           A +L RE SSRRG+RTGG    EG+      G+ YW++D     +KSDRW  F R LSM+
Sbjct: 280 ATSLPREGSSRRGYRTGGGGYDEGSSSRPAGGRSYWRIDGG---AKSDRWAFFTRALSMK 336

Query: 186 STKATAEAGESSGSHGPPMKLPSFKCLEPKTADETGLMTE 305
           S K  AE G+  GS  P +K+PSFKCLEPK  DETGL+ +
Sbjct: 337 SPKVVAEGGDG-GSTTPVVKMPSFKCLEPKAVDETGLIAD 375


>ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           lycopersicum]
          Length = 398

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 53/117 (45%), Positives = 70/117 (59%), Gaps = 9/117 (7%)
 Frame = +3

Query: 3   LTRTGSYAPTLARERSSRRGFRTGGAEGTGLAGQFYWKMDKPEPESKSDRWTI------F 164
           L RT S A TL R  S+ RG+R G  EG+    + + ++D+ +PE+KSDRW +      F
Sbjct: 283 LNRTRSCAVTLPRHGSTTRGYRAGPGEGSNRGARSFKRIDRFDPETKSDRWFLKIAPPFF 342

Query: 165 ARGLSMRSTKATAEAGESSGSHG---PPMKLPSFKCLEPKTADETGLMTEDRNKSPV 326
            RG SM+S K  A+  E+S S       +KLPSF+CLEPK  DE GLM  D  +SPV
Sbjct: 343 TRGSSMKSPKVRADNEEASTSRSNMKVAVKLPSFQCLEPK-GDEPGLMANDSARSPV 398


>ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           tuberosum]
          Length = 398

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 52/117 (44%), Positives = 70/117 (59%), Gaps = 9/117 (7%)
 Frame = +3

Query: 3   LTRTGSYAPTLARERSSRRGFRTGGAEGTGLAGQFYWKMDKPEPESKSDRWTI------F 164
           L RT S A TL R  S+ RG+R G  EG+    + + ++D+ +PE+KSDRW +      F
Sbjct: 283 LNRTRSCAVTLPRHGSTTRGYRAGPGEGSNRGTRSFKRIDRFDPEAKSDRWFLKIAPPFF 342

Query: 165 ARGLSMRSTKATAEAGESSGSHG---PPMKLPSFKCLEPKTADETGLMTEDRNKSPV 326
            RG SM+S K  A+  E+S S       +K+PSFKCLEPK  DE GL+  D  +SPV
Sbjct: 343 TRGSSMKSPKVRADNEEASTSRSNVKVAVKMPSFKCLEPK-GDEPGLLANDSARSPV 398


>dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]
          Length = 154

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 52/117 (44%), Positives = 70/117 (59%), Gaps = 9/117 (7%)
 Frame = +3

Query: 3   LTRTGSYAPTLARERSSRRGFRTGGAEGTGLAGQFYWKMDKPEPESKSDRWTI------F 164
           L RT S A TL R  S+ RG+R G  EG+    + + ++D+ +PE+KSDRW +      F
Sbjct: 39  LNRTRSCAVTLPRHGSTTRGYRAGPGEGSNRGTRSFKRIDRFDPEAKSDRWFLKIAPPFF 98

Query: 165 ARGLSMRSTKATAEAGESSGSHG---PPMKLPSFKCLEPKTADETGLMTEDRNKSPV 326
            RG SM+S K  A+  E+S S       +K+PSFKCLEPK  DE GL+  D  +SPV
Sbjct: 99  TRGSSMKSPKLRADNEEASTSRSNVKVAVKMPSFKCLEPK-GDEPGLLANDSARSPV 154


>gb|EPS66294.1| hypothetical protein M569_08482, partial [Genlisea aurea]
          Length = 336

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/84 (44%), Positives = 52/84 (61%)
 Frame = +3

Query: 48  SSRRGFRTGGAEGTGLAGQFYWKMDKPEPESKSDRWTIFARGLSMRSTKATAEAGESSGS 227
           S RR +RTGG        ++ W+ +K +  +KSDRW IF+R +S + +KA A+ G   GS
Sbjct: 261 SLRRVYRTGG--------RYIWRTEKNDTAAKSDRWAIFSRAVSGKLSKAAADGGGEGGS 312

Query: 228 HGPPMKLPSFKCLEPKTADETGLM 299
               +K+PSF CLEPKT D  GL+
Sbjct: 313 --AAVKMPSFNCLEPKTEDGAGLI 334


>ref|XP_007030911.1| RING/U-box superfamily protein, putative isoform 1 [Theobroma
           cacao] gi|590643833|ref|XP_007030912.1| RING/U-box
           superfamily protein, putative isoform 1 [Theobroma
           cacao] gi|508719516|gb|EOY11413.1| RING/U-box
           superfamily protein, putative isoform 1 [Theobroma
           cacao] gi|508719517|gb|EOY11414.1| RING/U-box
           superfamily protein, putative isoform 1 [Theobroma
           cacao]
          Length = 382

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
 Frame = +3

Query: 33  LARERSSRRGFRTGGAEGTGLAGQFYWKMDKPEPESKSDRWT------IFARGLSMRSTK 194
           L RERSSRRG+RTG   G+G  G+ + ++++ +   KSDRW        F+R  SM+S K
Sbjct: 298 LPRERSSRRGYRTGEDGGSG-RGKSFRRLERLDQGVKSDRWVFSMTPPFFSRASSMKSPK 356

Query: 195 ATAEAGESSGSHGP 236
             A  GE S S  P
Sbjct: 357 VAANDGEGSSSSSP 370


Top