BLASTX nr result
ID: Mentha23_contig00040483
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha23_contig00040483
(422 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun... 64 3e-08
gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus... 63 4e-08
emb|CBI28035.3| unnamed protein product [Vitis vinifera] 63 5e-08
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 63 5e-08
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I... 63 5e-08
ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutr... 62 6e-08
ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Caps... 62 6e-08
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ... 62 6e-08
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat... 62 6e-08
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a... 62 8e-08
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I... 62 8e-08
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil... 61 2e-07
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 60 2e-07
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a... 60 4e-07
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun... 59 5e-07
ref|XP_007152860.1| hypothetical protein PHAVU_004G166200g [Phas... 59 7e-07
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin... 59 9e-07
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin... 59 9e-07
ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ri... 58 1e-06
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A... 57 3e-06
>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RA+LVVQQNLTPFARTC+SEISTKFHLEVFQ
Sbjct: 97 RAVLVVQQNLTPFARTCISEISTKFHLEVFQ 127
>gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus guttatus]
Length = 206
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/31 (90%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RA+L+VQQNLTPFARTC+SEISTKFHLEVFQ
Sbjct: 97 RAVLIVQQNLTPFARTCISEISTKFHLEVFQ 127
>emb|CBI28035.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILVVQQNLTPFARTC++EISTKFHLEVFQ
Sbjct: 77 RAILVVQQNLTPFARTCINEISTKFHLEVFQ 107
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILVVQQNLTPFARTC++EISTKFHLEVFQ
Sbjct: 97 RAILVVQQNLTPFARTCINEISTKFHLEVFQ 127
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1 isoform 1 [Vitis vinifera]
gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1 isoform 2
[Vitis vinifera]
Length = 206
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILVVQQNLTPFARTC++EISTKFHLEVFQ
Sbjct: 97 RAILVVQQNLTPFARTCINEISTKFHLEVFQ 127
>ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutrema salsugineum]
gi|557107329|gb|ESQ47636.1| hypothetical protein
EUTSA_v10021534mg [Eutrema salsugineum]
Length = 206
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILVVQQNLTPFARTC+SEIS+KFHLEVFQ
Sbjct: 97 RAILVVQQNLTPFARTCISEISSKFHLEVFQ 127
>ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Capsella rubella]
gi|482567281|gb|EOA31470.1| hypothetical protein
CARUB_v10014656mg [Capsella rubella]
Length = 205
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILVVQQNLTPFARTC+SEIS+KFHLEVFQ
Sbjct: 96 RAILVVQQNLTPFARTCISEISSKFHLEVFQ 126
>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
Full=DNA-directed RNA polymerases II and IV subunit 5A;
Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
II subunit E; AltName: Full=RNA polymerase I, II and III
24.3 kDa subunit; Short=AtRPB24.3
gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
[Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
NRPB5 [Arabidopsis thaliana]
Length = 205
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILVVQQNLTPFARTC+SEIS+KFHLEVFQ
Sbjct: 96 RAILVVQQNLTPFARTCISEISSKFHLEVFQ 126
>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
lyrata subsp. lyrata]
Length = 205
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILVVQQNLTPFARTC+SEIS+KFHLEVFQ
Sbjct: 96 RAILVVQQNLTPFARTCISEISSKFHLEVFQ 126
>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/31 (90%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
+AIL+VQQNLTPFARTC+SEISTKFHLEVFQ
Sbjct: 97 QAILIVQQNLTPFARTCISEISTKFHLEVFQ 127
>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Solanum lycopersicum]
gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
isoform 2 [Solanum lycopersicum]
Length = 206
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/31 (90%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
+AIL+VQQNLTPFARTC+SEISTKFHLEVFQ
Sbjct: 97 QAILIVQQNLTPFARTCISEISTKFHLEVFQ 127
>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 206
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/31 (87%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RA+LVVQQNLTPFARTC++EIS+KFHLEVFQ
Sbjct: 97 RAVLVVQQNLTPFARTCINEISSKFHLEVFQ 127
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILVVQQNLTPFARTC+ EIS KFHLEVFQ
Sbjct: 97 RAILVVQQNLTPFARTCIQEISAKFHLEVFQ 127
>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
+AIL+VQQNLTPFARTC+SEIS KFHLEVFQ
Sbjct: 97 QAILIVQQNLTPFARTCISEISIKFHLEVFQ 127
>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
gi|462414880|gb|EMJ19617.1| hypothetical protein
PRUPE_ppa011542mg [Prunus persica]
Length = 206
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RA+LV QQNLTPFA+TC+SEIS+KFHLEVFQ
Sbjct: 97 RAVLVTQQNLTPFAKTCISEISSKFHLEVFQ 127
>ref|XP_007152860.1| hypothetical protein PHAVU_004G166200g [Phaseolus vulgaris]
gi|561026169|gb|ESW24854.1| hypothetical protein
PHAVU_004G166200g [Phaseolus vulgaris]
Length = 207
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILV Q NLTPFARTCVSEIS+KFHLEVFQ
Sbjct: 98 RAILVTQTNLTPFARTCVSEISSKFHLEVFQ 128
>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
gi|255627545|gb|ACU14117.1| unknown [Glycine max]
Length = 206
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILV Q NLTPFARTC+SEIS+KFHLEVFQ
Sbjct: 97 RAILVTQTNLTPFARTCISEISSKFHLEVFQ 127
>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
gi|255625665|gb|ACU13177.1| unknown [Glycine max]
Length = 206
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILV Q NLTPFARTC+SEIS+KFHLEVFQ
Sbjct: 97 RAILVTQTNLTPFARTCISEISSKFHLEVFQ 127
>ref|XP_002514265.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223546721|gb|EEF48219.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 225
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/31 (83%), Positives = 31/31 (100%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILVVQQ+LTPFARTC++EI++KFHLEVFQ
Sbjct: 116 RAILVVQQSLTPFARTCIAEIASKFHLEVFQ 146
>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
gi|548863022|gb|ERN20377.1| hypothetical protein
AMTR_s00068p00034280 [Amborella trichopoda]
Length = 206
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -3
Query: 420 RAILVVQQNLTPFARTCVSEISTKFHLEVFQ 328
RAILV+QQNLTPFAR CV EIS KFHLE+FQ
Sbjct: 97 RAILVLQQNLTPFARQCVQEISAKFHLEIFQ 127