BLASTX nr result

ID: Mentha23_contig00038482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha23_contig00038482
         (311 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus...    64   2e-08
ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    61   1e-07
ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    60   3e-07
dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]                60   3e-07
ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    57   3e-06
ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    57   3e-06

>gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus guttatus]
          Length = 383

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/56 (57%), Positives = 38/56 (67%)
 Frame = +2

Query: 26  AKSDRWAIFTRGLSMRSTKVTXXXXXXXXXXXPPMKLPSFKCLEPKTADETGLMSE 193
           AKSDRWA FTR LSM+S KV            P +K+PSFKCLEPK  DETGL+++
Sbjct: 321 AKSDRWAFFTRALSMKSPKVVAEGGDGGSTT-PVVKMPSFKCLEPKAVDETGLIAD 375


>ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           tuberosum]
          Length = 398

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
 Frame = +2

Query: 2   KMDKSEPEAKSDRWAI------FTRGLSMRSTKV---TXXXXXXXXXXXPPMKLPSFKCL 154
           ++D+ +PEAKSDRW +      FTRG SM+S KV                 +K+PSFKCL
Sbjct: 320 RIDRFDPEAKSDRWFLKIAPPFFTRGSSMKSPKVRADNEEASTSRSNVKVAVKMPSFKCL 379

Query: 155 EPKTADETGLMSEDRNKSPV 214
           EPK  DE GL++ D  +SPV
Sbjct: 380 EPK-GDEPGLLANDSARSPV 398


>ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           lycopersicum]
          Length = 398

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
 Frame = +2

Query: 2   KMDKSEPEAKSDRWAI------FTRGLSMRSTKV---TXXXXXXXXXXXPPMKLPSFKCL 154
           ++D+ +PE KSDRW +      FTRG SM+S KV                 +KLPSF+CL
Sbjct: 320 RIDRFDPETKSDRWFLKIAPPFFTRGSSMKSPKVRADNEEASTSRSNMKVAVKLPSFQCL 379

Query: 155 EPKTADETGLMSEDRNKSPV 214
           EPK  DE GLM+ D  +SPV
Sbjct: 380 EPK-GDEPGLMANDSARSPV 398


>dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]
          Length = 154

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
 Frame = +2

Query: 2   KMDKSEPEAKSDRWAI------FTRGLSMRSTKV---TXXXXXXXXXXXPPMKLPSFKCL 154
           ++D+ +PEAKSDRW +      FTRG SM+S K+                 +K+PSFKCL
Sbjct: 76  RIDRFDPEAKSDRWFLKIAPPFFTRGSSMKSPKLRADNEEASTSRSNVKVAVKMPSFKCL 135

Query: 155 EPKTADETGLMSEDRNKSPV 214
           EPK  DE GL++ D  +SPV
Sbjct: 136 EPK-GDEPGLLANDSARSPV 154


>ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           tuberosum]
          Length = 433

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
 Frame = +2

Query: 2   KMDKSEPEAKSDRWAI------FTRGLSMRSTKV--TXXXXXXXXXXXPPMKLPSFKCLE 157
           +M+ SEPE KSDRW        F+RG SM+S +V                +KLPSFKCLE
Sbjct: 356 RMEWSEPEPKSDRWIFTMAPPFFSRGSSMKSPRVGAEAGEGSTSGSLRTAVKLPSFKCLE 415

Query: 158 PKTADETGLMSEDRNKSPV 214
           PK  DE  LMS D  + PV
Sbjct: 416 PK-GDEASLMSTDSARPPV 433


>ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           lycopersicum]
          Length = 432

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
 Frame = +2

Query: 2   KMDKSEPEAKSDRWAI------FTRGLSMRSTKV--TXXXXXXXXXXXPPMKLPSFKCLE 157
           +M+ SEPE KSDRW        F+RG SM+S +V                +KLPSFKCLE
Sbjct: 355 RMEWSEPEPKSDRWIFTMTPPFFSRGSSMKSPRVGAEAGEGSTSGSMRTAVKLPSFKCLE 414

Query: 158 PKTADETGLMSEDRNKSPV 214
           PK  DE  LMS D  + PV
Sbjct: 415 PK-GDEASLMSTDSARPPV 432


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